BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy996
(221 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 146/186 (78%), Gaps = 19/186 (10%)
Query: 31 KEDKKPSVTQ--YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA 88
+++KKPS Q +P + +TD+VRLKCREML N++++G++ +G A EE+A ELE+A
Sbjct: 142 RDEKKPSSAQTSFP---AGGMTDAVRLKCREMLTNALKIGEVP-EGCAEPEEMAAELEDA 197
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY+EFKNTD +YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E
Sbjct: 198 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPE--------- 248
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRSAD
Sbjct: 249 ----EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSAD 304
Query: 209 EPMTTL 214
EPMTT
Sbjct: 305 EPMTTF 310
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 147/188 (78%), Gaps = 19/188 (10%)
Query: 29 EKKEDKKPSVTQ--YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
+K+E+KK S +Q +P S +TD+VRLKCREML ++++G++ +G A EE+A ELE
Sbjct: 130 DKREEKKVSSSQTSFP---SGGMTDAVRLKCREMLTTALKMGEVP-EGCAEPEEMAAELE 185
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
+AIY+EFKNTD +YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E
Sbjct: 186 DAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPE------- 238
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRS 206
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRS
Sbjct: 239 ------EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRS 292
Query: 207 ADEPMTTL 214
ADEPMTT
Sbjct: 293 ADEPMTTF 300
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 141/184 (76%), Gaps = 16/184 (8%)
Query: 31 KEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY 90
K+D+K T +P S +TD+VRLKCREML N+++ GD+ +G EE+A ELEEAIY
Sbjct: 146 KDDRKLIQTSFPA--SSGMTDAVRLKCREMLCNALKTGDIP-EGWPEPEEMAIELEEAIY 202
Query: 91 NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMT 150
EF+NTD +YKNRVRSR+ANLKDPKNP L N++ GAI+A +LA MT E
Sbjct: 203 AEFRNTDMKYKNRVRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMTPE----------- 251
Query: 151 TFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEP 210
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRS+DEP
Sbjct: 252 --EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEP 309
Query: 211 MTTL 214
MTT
Sbjct: 310 MTTF 313
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 135/176 (76%), Gaps = 14/176 (7%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDN 98
T +P + D+VRLKCREML ++++G++ DG A EE+A ELE+AIY EFKNTD
Sbjct: 176 TTFPSGGGGGMKDAVRLKCREMLATALKMGEVP-DGCAEPEEMAAELEDAIYMEFKNTDM 234
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E EMA+DE
Sbjct: 235 KYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPE-------------EMASDE 281
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
MK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 282 MKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTF 337
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 144/186 (77%), Gaps = 19/186 (10%)
Query: 31 KEDKKPSVTQ--YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA 88
+E+K+ S +Q +P S +TD+VRLKCREML ++++G++ +G A EE+A ELE+A
Sbjct: 134 REEKRASSSQTSFP---SGGMTDAVRLKCREMLTTALKMGEVP-EGCAEPEEMAAELEDA 189
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY EFKNTD +YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E
Sbjct: 190 IYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPE--------- 240
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRSAD
Sbjct: 241 ----EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSAD 296
Query: 209 EPMTTL 214
EPMTT
Sbjct: 297 EPMTTF 302
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 137/179 (76%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+ T +PP S N TD+VRLKCREML ++I+V +G + EEL ELEEAI++EF+N
Sbjct: 125 PTQTSFPP--SSNTTDAVRLKCREMLASAIRVDGEPPEGCQTPEELGDELEEAIFSEFRN 182
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSR+ANLKD KNP L NYI GAI+A +LA MT E EMA
Sbjct: 183 TDMKYKNRVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMTPE-------------EMA 229
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DEMK LR++F+KE+I+DAQLAT QGTKTDLLKCGKCKKRNCTYNQ+QTRS+DEPMTT
Sbjct: 230 SDEMKNLRDRFVKEAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTF 288
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 136/178 (76%), Gaps = 17/178 (9%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
S T +P S +TD+VR+KCREML ++++G++ +G EE+A ELE+AIY+EF NT
Sbjct: 140 SQTSFP---SGGMTDAVRIKCREMLATALKIGEVP-EGCGEPEEMAAELEDAIYSEFNNT 195
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
D +YKNR+RSR+ANLKDPKNP L N++ GA++A +LA MT E EMA+
Sbjct: 196 DMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPE-------------EMAS 242
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DEMK LR KF+KE+I+DAQLATVQGTKTDLLKC KCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 243 DEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF 300
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 133/169 (78%), Gaps = 14/169 (8%)
Query: 46 SHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVR 105
S +TD+VR+KCREML ++++G++ +G EE+A ELE+AIY+EFKNTD +YKNR+R
Sbjct: 146 SGGMTDAVRIKCREMLAAALKIGEVP-EGCGEPEEMAAELEDAIYSEFKNTDMKYKNRIR 204
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNK 165
SR+ANLKDPKNP L N++ GA++A +LA MT E EMA+DEMK LR K
Sbjct: 205 SRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPE-------------EMASDEMKKLREK 251
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
F+KE+I+DAQLATVQGTKTDLLKC KCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 252 FVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF 300
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 148/203 (72%), Gaps = 21/203 (10%)
Query: 19 SSSKKKEAKEEK--KEDK-----KPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLD 71
S+SK K KEEK +EDK K Q+PP S N TD+VRLKCREML +I+ +
Sbjct: 93 STSKPKRDKEEKSSREDKDRDKEKKLPNQFPPS-SSNTTDAVRLKCREMLAAAIRCDTEE 151
Query: 72 MDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+G AS E+LA ELEEAI+ EFKNTD RYKNRVRSRIANLKD KNP L N+ GAI AS
Sbjct: 152 FEGCASPEDLAEELEEAIFQEFKNTDMRYKNRVRSRIANLKDVKNPNLRTNFRIGAIPAS 211
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+LA MTAE EMANDE+K LR +F KE+I+DAQLATVQGTKTDLLKCGK
Sbjct: 212 RLAVMTAE-------------EMANDEIKQLRERFTKEAINDAQLATVQGTKTDLLKCGK 258
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
CKKRNCTYNQVQTRSADEPMTT
Sbjct: 259 CKKRNCTYNQVQTRSADEPMTTF 281
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 135/176 (76%), Gaps = 17/176 (9%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDN 98
T +P S +TD+VR+KCREML ++++G++ +G EE+A ELE+AIY+EF NTD
Sbjct: 140 TSFP---SGGMTDAVRIKCREMLATALKIGEVP-EGCGEPEEMAAELEDAIYSEFNNTDM 195
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YKNR+RSR+ANLKDPKNP L N++ GA++A +LA MT E EMA+DE
Sbjct: 196 KYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPE-------------EMASDE 242
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
MK LR KF+KE+I+DAQLATVQGTKTDLLKC KCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 243 MKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF 298
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 132/167 (79%), Gaps = 14/167 (8%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
+TD+VR+KCREML ++++G++ +G EE+A ELE+AIY+EFKNTD +YKNR+RSR
Sbjct: 148 GMTDAVRIKCREMLAAALKIGEVP-EGCGEPEEMAAELEDAIYSEFKNTDMKYKNRIRSR 206
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+ANLKDPKNP L N++ GA++A +LA MT E EMA+DEMK LR KF+
Sbjct: 207 VANLKDPKNPGLRGNFMCGAVTAKQLAKMTPE-------------EMASDEMKKLREKFV 253
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I+DAQLATVQGTKTDLLKC KCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 254 KEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTF 300
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 145/194 (74%), Gaps = 14/194 (7%)
Query: 22 KKKEAKEEKKEDKKPSVTQYP-PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE 80
KK + EK+ KPS T P +S N TD+VRLKCREML N+++V +G + EE
Sbjct: 139 KKDSDRGEKESKSKPSSTPVSIPSQSSNTTDAVRLKCREMLANALRVDGEPPEGCQTPEE 198
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
L ELEEAI+ EFKNTD RYKNR+RSR+ANLKDPKNP L N++ GA++A +LA MT+E
Sbjct: 199 LGEELEEAIFVEFKNTDMRYKNRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSE- 257
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
EMA+DEMK LR++F+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYN
Sbjct: 258 ------------EMASDEMKLLRDRFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYN 305
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 306 QLQTRSADEPMTTF 319
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 148/189 (78%), Gaps = 19/189 (10%)
Query: 28 EEKKEDKKPSVTQ--YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATEL 85
++K+E+KKP+ Q +P + +TD+VRLKCREML N++++G++ DG A EE+A EL
Sbjct: 140 KDKREEKKPAAAQTTFP---AGGMTDAVRLKCREMLANALKIGEVP-DGCAEPEEMAAEL 195
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EEAIY EFKNTD +YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E
Sbjct: 196 EEAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPE------ 249
Query: 146 DEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTR 205
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTR
Sbjct: 250 -------EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 302
Query: 206 SADEPMTTL 214
SADEPMTT
Sbjct: 303 SADEPMTTF 311
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 148/189 (78%), Gaps = 19/189 (10%)
Query: 28 EEKKEDKKPSVTQ--YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATEL 85
++K+E+KKP+ Q +P + +TD+VRLKCREML N++++G++ DG A EE+A EL
Sbjct: 140 KDKREEKKPAAAQTTFP---AGGMTDAVRLKCREMLANALKIGEVP-DGCAEPEEMAAEL 195
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EEAIY EFKNTD +YKNR+RSR+ANLKDPKNP L N++ GA+SA +LA MT E
Sbjct: 196 EEAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPE------ 249
Query: 146 DEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTR 205
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTR
Sbjct: 250 -------EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 302
Query: 206 SADEPMTTL 214
SADEPMTT
Sbjct: 303 SADEPMTTF 311
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 152/207 (73%), Gaps = 20/207 (9%)
Query: 11 PGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDL 70
P + +K K +E K KK+D+K T +PP N DSVR+KCRE+L +I+ G+
Sbjct: 87 PKLEKSKPVEDKSEEPKPTKKDDRKRHQTSFPP---SNTADSVRIKCRELLAAAIK-GNT 142
Query: 71 D---MDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ +DG S E+LA ELEEAI+NEF+NTD +YKNR+RSR+ANLKDPKNP L NY+ GA
Sbjct: 143 ESDQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKNRIRSRVANLKDPKNPNLRMNYLIGA 202
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
+ AS+LA MTAE E+A+DEMK +R+KF KE+I+DAQLATVQGTKTDLL
Sbjct: 203 LPASRLAVMTAE-------------ELASDEMKQIRDKFKKEAINDAQLATVQGTKTDLL 249
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
KCGKCKKRNCTYNQVQTRSADEPMTT
Sbjct: 250 KCGKCKKRNCTYNQVQTRSADEPMTTF 276
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 145/192 (75%), Gaps = 14/192 (7%)
Query: 23 KKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELA 82
K++ ++++DKK + ++ PQ++ N TD+VRLKCREML +++QV +G EEL
Sbjct: 102 KRDHHRKERDDKKRARSR-SPQRASNTTDTVRLKCREMLAHALQVEGEQPEGCQPPEELG 160
Query: 83 TELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
ELEEAI+ E KNTD RYKNRVRSR+ANLKDPKNP L N++ GAI+A +LA MT E
Sbjct: 161 EELEEAIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPE--- 217
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
EMA+DEMK LR++F+KE+I+DAQLAT QGTKTDLLKCGKCKKRNCTYNQ+
Sbjct: 218 ----------EMASDEMKNLRDRFVKEAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQL 267
Query: 203 QTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 268 QTRSADEPMTTF 279
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 144/197 (73%), Gaps = 18/197 (9%)
Query: 18 DSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLAS 77
DS K K K +KK S +P S TD+VRLKCRE+L +++QV +DG AS
Sbjct: 121 DSRDTKTNDKVNKDLNKKHS--SFP---SSTTTDAVRLKCRELLASALQVEGNTIDGCAS 175
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
EELA ELEEAI+ EFKNTDN+Y+NRVRSR+ANL+D KNP L N+I GAI+ +LATMT
Sbjct: 176 PEELAEELEEAIFGEFKNTDNKYRNRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMT 235
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNC 197
AE EMA+DE+K LR +F KE+I+DAQLATVQGTKTDLLKCGKCKKRNC
Sbjct: 236 AE-------------EMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNC 282
Query: 198 TYNQVQTRSADEPMTTL 214
TYNQVQTRSADEPMTT
Sbjct: 283 TYNQVQTRSADEPMTTF 299
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 132/167 (79%), Gaps = 13/167 (7%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
N TD+VRLKCREML N+++V +G + EEL ELEEAI+ EFKNTD RYKNRVRSR
Sbjct: 149 NTTDAVRLKCREMLANALRVDGEPPEGCQTPEELGEELEEAIFVEFKNTDMRYKNRVRSR 208
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+ANLKDPKNP L N++ GAI+A +LA MT+E EMA+DEMK LR++F+
Sbjct: 209 VANLKDPKNPSLRANFVSGAITAQRLAKMTSE-------------EMASDEMKHLRDRFV 255
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 256 KEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTF 302
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 137/179 (76%), Gaps = 14/179 (7%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+ T +P S N TD+VRLKCREML N+++V +G S EELA ELEEAIY EFKN
Sbjct: 126 PAQTSFPTH-SSNTTDAVRLKCREMLTNALRVDGEQPEGCQSPEELADELEEAIYVEFKN 184
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSR+ANLKDPKNP L N++ GAI+A +LA MT E EMA
Sbjct: 185 TDMKYKNRVRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPE-------------EMA 231
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DEMK LR++F+KE+I+DAQLAT QGTKTDLLKCGKCKKRNCTYNQ+QTRS+DEPMTT
Sbjct: 232 SDEMKNLRDRFVKEAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTF 290
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/165 (69%), Positives = 131/165 (79%), Gaps = 13/165 (7%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
TD+VRLKCRE+L +++V +DG AS EELA ELEEAIY EFKNTDNRYKNRVRSR+A
Sbjct: 114 TDAVRLKCRELLAAALRVDGKVIDGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVA 173
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D KNP L N+I GAI+ ++LA MTAE EMA+DE+K LR +F KE
Sbjct: 174 NLRDVKNPNLRTNFIVGAITPARLAVMTAE-------------EMASDEIKQLREQFKKE 220
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT
Sbjct: 221 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTF 265
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 134/167 (80%), Gaps = 14/167 (8%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
+TD+VRLKCREML ++++G++ +G A EE+A ELEEAIY+EFKNTD +YKNR+RSR
Sbjct: 154 GMTDAVRLKCREMLTTALKIGEVP-EGCAEPEEMAAELEEAIYSEFKNTDMKYKNRIRSR 212
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+ANLKDPKNP L N++ GA+SA +LA MT E EMA+DEMK LR KF+
Sbjct: 213 VANLKDPKNPGLRGNFMCGAVSAKQLAKMTPE-------------EMASDEMKKLREKFV 259
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ+QTRSADEPMTT
Sbjct: 260 KEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTF 306
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 140/193 (72%), Gaps = 18/193 (9%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEEL 81
K KE K K +K S P TD+VRLKCRE+L +++V ++G AS EEL
Sbjct: 124 KMKEEKPHKDIQRKQSTFPAP-----TTTDAVRLKCRELLAAALRVDGNTIEGCASPEEL 178
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A ELEEAIY EFKNTDNRYKNRVRSR+ANL+D KNP L N+I GAI+ ++LA MTAE
Sbjct: 179 AEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAE-- 236
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
EMA+DE+K LR +F KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ
Sbjct: 237 -----------EMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 285
Query: 202 VQTRSADEPMTTL 214
VQTRSADEPMTT
Sbjct: 286 VQTRSADEPMTTF 298
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/193 (62%), Positives = 140/193 (72%), Gaps = 18/193 (9%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEEL 81
K KE K K +K S P TD+VRLKCRE+L +++V ++G AS EEL
Sbjct: 125 KMKEEKPHKDIQRKQSTFPAP-----TTTDAVRLKCRELLAAALRVDGNTIEGCASPEEL 179
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A ELEEAIY EFKNTDNRYKNRVRSR+ANL+D KNP L N+I GAI+ ++LA MTAE
Sbjct: 180 AEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAE-- 237
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
EMA+DE+K LR +F KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQ
Sbjct: 238 -----------EMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 286
Query: 202 VQTRSADEPMTTL 214
VQTRSADEPMTT
Sbjct: 287 VQTRSADEPMTTF 299
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 130/165 (78%), Gaps = 13/165 (7%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
TD+VRLKCRE+L +++V +D AS EELA ELEEAIY EFKNTDNRYKNRVRSRIA
Sbjct: 147 TDAVRLKCRELLIAALRVDGKVIDSCASPEELAEELEEAIYGEFKNTDNRYKNRVRSRIA 206
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D KNP L N++ GAI+ ++LA MTAE EMA+DE+K LR +F KE
Sbjct: 207 NLRDAKNPNLRMNFLVGAITPARLAVMTAE-------------EMASDEIKQLREQFKKE 253
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT
Sbjct: 254 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTF 298
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/165 (67%), Positives = 130/165 (78%), Gaps = 13/165 (7%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
TD+VRLKCRE+L ++ V +DG AS EELA ELEEAIY EFKNTD+RYKNRVRSR+A
Sbjct: 124 TDAVRLKCRELLAAALHVDGKVIDGCASPEELAEELEEAIYAEFKNTDSRYKNRVRSRVA 183
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D KNP L N++ GAI+ ++LA MTAE EMA+DE+K LR +F KE
Sbjct: 184 NLRDVKNPNLRTNFLVGAITPARLAVMTAE-------------EMASDEIKQLREQFKKE 230
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT
Sbjct: 231 AINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTF 275
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 124/172 (72%), Gaps = 13/172 (7%)
Query: 43 PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKN 102
P TDSVRLKCREML +I+ + +DG E LA LEE IY EF+NTD +YKN
Sbjct: 128 PALPSTTTDSVRLKCREMLCAAIKGDGVAVDGGGDPEYLAQMLEECIYKEFRNTDMKYKN 187
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
RVRSR++NLKD +NP L N++ G +S ++L+ MT+E EMA+DEMK +
Sbjct: 188 RVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMTSE-------------EMASDEMKNI 234
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
R KF KESI+DAQLATVQGT+TDLLKCGKC KRNCTYNQVQTRSADEPMTT
Sbjct: 235 RQKFTKESINDAQLATVQGTQTDLLKCGKCGKRNCTYNQVQTRSADEPMTTF 286
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 138/217 (63%), Gaps = 21/217 (9%)
Query: 2 NFIFLFPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSH----NLTDSVRLKC 57
N+ L + P + +DSSS+ E++E KK P P +++ N TD+VRLKC
Sbjct: 76 NWKKLIGSTP--TRAEDSSSR--ESRENKKSSTTPPARPVPAKQTSFPAGNTTDAVRLKC 131
Query: 58 REMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNP 117
REML N+++ L A +ELA +E ++EF NTD +Y++R+RSR+ANLKDPKNP
Sbjct: 132 REMLSNALKGNGLPDGCAADPDELAERIESTCFDEFNNTDTKYRSRIRSRVANLKDPKNP 191
Query: 118 MLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA 177
L + G+I +LA MTAE EMA+DE+K LR K KE+IDD Q+A
Sbjct: 192 NLRLGVLIGSIKPERLAKMTAE-------------EMASDELKQLRQKLTKEAIDDHQMA 238
Query: 178 TVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
GTKTDLLKCGKCKK NCTYNQVQTRSADEPMTT
Sbjct: 239 LTSGTKTDLLKCGKCKKSNCTYNQVQTRSADEPMTTF 275
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/174 (63%), Positives = 134/174 (77%), Gaps = 15/174 (8%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
+PPQ N TD+VRLKCRE+L ++++ + + A+ EELA +LEE IY EFKNTD RY
Sbjct: 121 FPPQ--SNTTDAVRLKCRELLTQALKIDGENPNACATPEELAEDLEECIYAEFKNTDMRY 178
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
KNRVRSR+ANLKDPKNP L N++ G I+A++LA MT E EMA+DEMK
Sbjct: 179 KNRVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPE-------------EMASDEMK 225
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
LR KFIKE+IDDAQLATVQGTKT++LKCGKCKK+NCTYNQ+QTRS+DEPMTT
Sbjct: 226 KLREKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTF 279
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 135/226 (59%), Gaps = 38/226 (16%)
Query: 12 GISNNKDSSSKKKEA-----------------------KEEKKEDKKPSVTQYPPQKSHN 48
G SN+KDS KKKEA KEE ++ +P ++
Sbjct: 81 GPSNDKDSEDKKKEAASSSQNSPEAREESSSSSNSSNRKEESNTGSDAFISSFP--RAPI 138
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRI 108
+DSVR+KCREML +++ GD + A EEL +++EEAI+ E KNTD +YKNRVRSRI
Sbjct: 139 TSDSVRMKCREMLAAALKTGDDYIAIGADEEELGSQIEEAIFQELKNTDMKYKNRVRSRI 198
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
ANLKD KNP L +N + G I+ + A MTAE EMA+DE+K +R K
Sbjct: 199 ANLKDTKNPNLRKNVLCGNIAPDRFAKMTAE-------------EMASDELKEMRKNLTK 245
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 EAIREHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 139/209 (66%), Gaps = 25/209 (11%)
Query: 18 DSSSKKKEAKEEKKED---------KKPSVTQYPPQKSH-NLTDSVRLKCREMLQNSIQV 67
+S KKK+++EE K+ K +++ PQK++ TD VRL+CREML N+++
Sbjct: 83 NSDKKKKDSEEESKKSPHSKEESNAKSNGLSKSFPQKTNIATTDDVRLRCREMLTNALKG 142
Query: 68 GDLDM-DGLA-SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
D+ DG+ S EELA +EEAI++ FK+T +YKN++RSR+ NLKD KNP L N +
Sbjct: 143 IGSDLPDGICKSPEELADLIEEAIFSNFKSTSAKYKNQIRSRVFNLKDKKNPALRENVLT 202
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTD 185
G I SK A MTA+ EMA++E+K R F+K+ ID +QLA +QGTKTD
Sbjct: 203 GIIEPSKFAVMTAD-------------EMASNEVKKQRADFVKQGIDASQLAQIQGTKTD 249
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
LLKCGKC KRNCTYNQ+QTRSADEPMTT
Sbjct: 250 LLKCGKCLKRNCTYNQIQTRSADEPMTTF 278
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 123/167 (73%), Gaps = 15/167 (8%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T++VRLKCRE+L ++++ D+ DG +++ LA ++EE+IYNEF +T+ +YKNRVRSR++
Sbjct: 151 TNAVRLKCRELLSSALKCEDMP-DG-CNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVS 208
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD +NP L N + GAI ++A M+AE EMA+DEMK LR +F KE
Sbjct: 209 NLKDSRNPALRLNVLHGAIDPERIARMSAE-------------EMASDEMKELRQRFTKE 255
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHH 216
SI+D Q+A GTKTDLLKCGKC+K NCTYNQVQTRSADEPMTT +
Sbjct: 256 SINDHQMAVTGGTKTDLLKCGKCRKNNCTYNQVQTRSADEPMTTFCY 302
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 120/165 (72%), Gaps = 15/165 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T++VRLKCRE+L ++++ D M + + LA ++EE+IYNEF +T+N+YKNRVRSR++
Sbjct: 130 TNAVRLKCRELLSSALKCED--MPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVS 187
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L N + GAI ++A MTAE EMA+D+MK LR + KE
Sbjct: 188 NLKDSKNPALRINVLHGAIEPERIARMTAE-------------EMASDDMKQLRQRLTKE 234
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I+D Q+AT GTKTDLLKCGKC+K NCTYNQVQTRSADEPMTT
Sbjct: 235 AINDHQMATTGGTKTDLLKCGKCRKNNCTYNQVQTRSADEPMTTF 279
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 136/224 (60%), Gaps = 34/224 (15%)
Query: 12 GISNNKDSSSKKKE----------AKEE----------KKEDKKPSVTQYPP-QKSHNLT 50
G S +KDS KKKE A+EE K+E PS + P ++ + +
Sbjct: 44 GPSTDKDSEEKKKEPASSSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTS 103
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR+KCREML +++ GD + A EEL + +EEAI+ E KNTD +YKNRVRSRIAN
Sbjct: 104 DSVRVKCREMLSAALRTGDDYIAIGADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIAN 163
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + G I K A MTAE EMA+DE+K +R KE+
Sbjct: 164 LKDAKNPNLRKNVLCGNIPPDKFAKMTAE-------------EMASDELKEMRKNLTKEA 210
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 211 IREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 254
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 136/224 (60%), Gaps = 34/224 (15%)
Query: 12 GISNNKDSSSKKKE----------AKEE----------KKEDKKPSVTQYPP-QKSHNLT 50
G S +KDS KKKE A+EE K+E PS + P ++ + +
Sbjct: 81 GPSTDKDSEEKKKEPASSSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTS 140
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR+KCREML +++ GD + A EEL + +EEAI+ E KNTD +YKNRVRSRIAN
Sbjct: 141 DSVRVKCREMLSAALRTGDDYIAIGADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIAN 200
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + G I K A MTAE EMA+DE+K +R KE+
Sbjct: 201 LKDAKNPNLRKNVLCGNIPPDKFAKMTAE-------------EMASDELKEMRKNLTKEA 247
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 248 IREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 19/211 (9%)
Query: 8 PAPPGIS-NNKDSSSKKKEAKEEKKEDKKPS---VTQYPPQKSHNLTDSVRLKCREMLQN 63
PAP S ++ SS K+E PS +T +P ++ + +DSVR+KCRE+L
Sbjct: 96 PAPAQNSPEAREESSSSTNISARKEECPAPSDGFITSFP--RAPSTSDSVRIKCRELLAT 153
Query: 64 SIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNY 123
+++ GD + A ++EL ++EEA++ EFKNT+ +YKNR+RSRIANLKD KNP L RN
Sbjct: 154 ALKTGDDHIAIGADVDELGAQIEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNV 213
Query: 124 IFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK 183
+ G I+ A M+AE EMA+DE+K +R KE+I + Q+A GT+
Sbjct: 214 LCGNIAPDLFARMSAE-------------EMASDELKEMRKNLTKEAIREHQMARTGGTE 260
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 261 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 114/165 (69%), Gaps = 13/165 (7%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DS+RLKCREML N++Q G+ + A EEL ++EE I+ EFKNTD +YKNRVRSRI+
Sbjct: 131 SDSIRLKCREMLANALQTGEDYIAIGADCEELGAQIEECIFQEFKNTDMKYKNRVRSRIS 190
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L R + G++S ++A MTAE EMA+DE+K +R KE
Sbjct: 191 NLKDMKNPNLRRTVLCGSVSPERMAKMTAE-------------EMASDELKEMRKNLTKE 237
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++ D Q+AT GT+TDL CGKCK + CTY QVQTRSADEPMTT
Sbjct: 238 AVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTF 282
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 131/211 (62%), Gaps = 19/211 (9%)
Query: 8 PAP----PGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQN 63
PAP P SS+ KEE +T +P ++ + +DSVR+KCRE+L
Sbjct: 95 PAPAQNSPEAREESSSSTNFGVLKEECPAPSDDFITSFP--RAPSTSDSVRIKCRELLAV 152
Query: 64 SIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNY 123
+++ GD + A ++EL ++EEA++ EFKNTD +YKNR+RSRIANLKD KNP L RN
Sbjct: 153 ALKTGDDHVAIGADVDELGAQIEEAVFQEFKNTDAKYKNRIRSRIANLKDAKNPNLRRNV 212
Query: 124 IFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK 183
+ G I+ A M+AE EMA+DE+K +R KE+I + Q+A GT+
Sbjct: 213 LCGNIAPDLFARMSAE-------------EMASDELKEMRKNLTKEAIREHQMARTGGTE 259
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 260 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 290
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 120/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V +P ++ + +D +R+KCREML N++Q GD + A +EL ++E+ I+ EFKNTD
Sbjct: 137 VNAFP--RAASTSDPIRVKCREMLANALQTGDDYIAIGADCDELGAQIEDFIFQEFKNTD 194
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L R + G+I+ ++A MTAE EMA+D
Sbjct: 195 MKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAE-------------EMASD 241
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE++ D Q+AT GT+TDL CGKCK +NCTY QVQTRSADEPMTT
Sbjct: 242 ELKEIRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMTTF 298
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 138/225 (61%), Gaps = 37/225 (16%)
Query: 12 GISNNKDSSSKKKE----------AKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KDS KKKE A+EE +K++ + V+ +P ++ N
Sbjct: 93 GPSTDKDSEEKKKEPAITSQNSPEAREESSSSGNVSSRKDETNTRDTYVSSFP--RAPNT 150
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DSVRLKCREM+ +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRI+
Sbjct: 151 SDSVRLKCREMIAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRIS 210
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L +N + G I A MTAE EMA+DE+K +R KE
Sbjct: 211 NLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKE 257
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 258 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 302
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+ +P ++ + +DSVR+KCREML +++ GD + A EEL +++EEAI+ E KNTD
Sbjct: 130 IPSFP--RAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSQIEEAIFQELKNTD 187
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRIANLKD KNP L +N + G I K A MTAE EMA+D
Sbjct: 188 MKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAE-------------EMASD 234
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 235 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 122/177 (68%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
++ +P ++ + +DSVR+KCREML ++Q GD + A +EL ++EE+I++EF+NTD
Sbjct: 7 ISTFP--RAPSTSDSVRMKCREMLSQALQAGDDYIAIGADCDELGAQIEESIFSEFQNTD 64
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRIANLKD KNP L RN + G ++ ++A MTAE EMA+D
Sbjct: 65 PKYKNRVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAE-------------EMASD 111
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I D Q++ GT+TDL CGKCKK+ CTY QVQTRSADEPMTT
Sbjct: 112 ELKLIRKNLTKEAIRDHQVSQTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMTTF 168
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 121/177 (68%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+ +P ++ + +DS+R+KCREML +++Q GD + A +EL ++EE I+ EFKNTD
Sbjct: 137 INTFP--RAPSTSDSIRIKCREMLASALQTGDDYIAIGADCDELGAQIEECIFQEFKNTD 194
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L R + G+++ ++A MTAE EMA+D
Sbjct: 195 MKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAE-------------EMASD 241
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE++ D Q+AT GT+TDL CGKCK ++CTY QVQTRSADEPMTT
Sbjct: 242 ELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKSCTYTQVQTRSADEPMTTF 298
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+ +P ++ + +DSVR+KCREML +++ GD + A EEL +++EEAI+ E KNTD
Sbjct: 130 IPSFP--RAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSQIEEAIFQELKNTD 187
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRIANLKD KNP L +N + G I K A MTAE EMA+D
Sbjct: 188 MKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAE-------------EMASD 234
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 235 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+T YP ++ + +DSVR+KCRE+L +++ GD + A EEL ++EEA++ EFKNTD
Sbjct: 132 ITSYP--RAPSTSDSVRIKCRELLSAALKTGDDYITIGADDEELGAQIEEAVFQEFKNTD 189
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRIANLKD KNP L RN + G IS A M+AE EMA+D
Sbjct: 190 AKYKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKMSAE-------------EMASD 236
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCK +NCTY QVQTRSADEPMTT
Sbjct: 237 ELKEMRKNLTKEAIREHQMAKTGGTETDLFSCGKCKMKNCTYTQVQTRSADEPMTTF 293
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 138/225 (61%), Gaps = 37/225 (16%)
Query: 12 GISNNKDSSSKKKE----------AKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KD+ KKKE A+EE +K++ + V+ +P ++ +
Sbjct: 176 GPSTDKDTEEKKKEPLITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFP--RAPST 233
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRI+
Sbjct: 234 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRIS 293
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L +N + G I A MTAE EMA+DE+K +R KE
Sbjct: 294 NLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKE 340
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 341 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 385
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 121/177 (68%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+T +P K+ +DSVR+KCRE+L +++ GD + A+++EL ++E+A++ EFKNT+
Sbjct: 129 ITSFP--KAPITSDSVRIKCRELLAAALKTGDDHIAIGANVDELGAQIEDAVFQEFKNTE 186
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNR+RSRIANLKD KNP L RN + G I+ A MTAE EMA+D
Sbjct: 187 AKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAE-------------EMASD 233
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 234 ELKEMRKNLTKEAIREHQMAKTGGTETDLFSCGKCKKKNCTYTQVQTRSADEPMTTF 290
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 138/225 (61%), Gaps = 37/225 (16%)
Query: 12 GISNNKDSSSKKK----------EAKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KDS KKK EA+EE +K++ + V+ +P ++ +
Sbjct: 79 GPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFP--RAPST 136
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRI+
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRIS 196
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L +N + G I A MTAE EMA+DE+K +R KE
Sbjct: 197 NLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKE 243
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 244 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 134/225 (59%), Gaps = 37/225 (16%)
Query: 12 GISNNKDSSSKKKEA-------------------KEEKKEDKKPS---VTQYPPQKSHNL 49
G S +KDS KKKE+ +KE+ S + +P ++ +
Sbjct: 127 GPSTDKDSDEKKKESAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFP--RAPST 184
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DSVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIA
Sbjct: 185 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIA 244
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L +N + G I A MTAE EMA+DE+K +R KE
Sbjct: 245 NLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKE 291
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 292 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 336
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 149 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 206
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 207 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 253
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 254 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 310
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 120/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
++ +P ++ + +DSVR+KCREML +++ GD + A EEL +++EEAI+ E KNTD
Sbjct: 130 ISSFP--RAPSTSDSVRMKCREMLAAALKTGDDYIAIGADEEELGSQIEEAIFQELKNTD 187
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRIANLKD KNP L +N + G I + A MTAE EMA+D
Sbjct: 188 MKYKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAE-------------EMASD 234
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 235 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTF 291
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 106 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 163
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 164 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 210
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 211 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 106 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 163
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 164 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 210
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 211 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 122/184 (66%), Gaps = 17/184 (9%)
Query: 33 DKKPS--VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY 90
D PS V +P ++ + +D +R+KCREML N++Q GD + A +EL ++E+ I+
Sbjct: 130 DDTPSSFVNTFP--RAASTSDPIRVKCREMLANALQTGDDYIAIGADCDELGAQIEDFIF 187
Query: 91 NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMT 150
FKNTD +YKNRVRSRI+NLKD KNP L R + G+I+ ++A MTAE
Sbjct: 188 QVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAE----------- 236
Query: 151 TFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEP 210
EMA+DE+K +R KE++ D Q+AT GT+TDL CGKCK +NCTY QVQTRSADEP
Sbjct: 237 --EMASDELKEIRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEP 294
Query: 211 MTTL 214
MTT
Sbjct: 295 MTTF 298
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 106 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 163
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 164 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 210
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 211 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 106 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEMRNTD 163
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 164 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 210
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 211 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 105 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 162
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 163 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 209
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 210 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 266
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 86 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 143
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 144 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 190
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 191 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 247
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 116 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 173
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 174 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 220
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 221 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 277
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 126 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 183
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 184 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 230
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 231 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 287
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 126 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 183
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 184 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 230
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 231 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 287
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 113 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 170
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 171 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 217
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 218 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 274
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEMRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 141 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 198
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 199 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 245
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 302
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 92 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 149
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 150 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 196
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 197 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 253
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 120/178 (67%), Gaps = 15/178 (8%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
SV PP + DSVR KC EM+ ++++ D + + +++A E+E+ IY E K T
Sbjct: 173 SVCFLPP--CYLTGDSVRDKCIEMISAALKMDDDYKEFGVNCDKMAAEIEDHIYQELKGT 230
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
D +Y+NRVRSRI+NLKDPKNP L RN + GAISA ++A MTAE EMA+
Sbjct: 231 DMKYRNRVRSRISNLKDPKNPGLRRNVLCGAISAGRIAKMTAE-------------EMAS 277
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DE+K LRN +E+I + Q+A GT TDL +CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 278 DELKELRNAMTQEAIREHQMAKTGGTATDLFQCGKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 130/174 (74%), Gaps = 15/174 (8%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
+PPQ N TD+VRLKCRE+L +++ + S EELA ELEE IY EFKNTD RY
Sbjct: 117 FPPQ--SNTTDAVRLKCRELLTQALKAAGETSNACGSPEELAEELEECIYAEFKNTDMRY 174
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
KNRVRSR+ANLKDPKNP L N+ G ISAS+LA MT E EMA+DEMK
Sbjct: 175 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPE-------------EMASDEMK 221
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
LR KFIKE+IDDAQLATVQGTKT++LKCGKCKK+NCTYNQ+QTRS+DEPMTT
Sbjct: 222 KLREKFIKEAIDDAQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTF 275
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 192 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 249
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 250 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 296
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 297 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 353
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+ +P ++ +DS+R+KCRE+L N++Q GD + A +EL ++EE I+ EFKNTD
Sbjct: 136 INTFP--RAPGTSDSIRIKCRELLANALQAGDDHIAIGADCDELGAQIEEVIFQEFKNTD 193
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L R + G+++ ++A M+AE EMA+D
Sbjct: 194 MKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAE-------------EMASD 240
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E++ +R KE++ D Q+AT GT+TDL CGKCK + CTY QVQTRSADEPMTT
Sbjct: 241 ELREMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTF 297
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE-------------------AKEEKKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE +KE+ S + P ++ + +D
Sbjct: 58 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETDASDSFIPSFPRAPSTSD 117
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 118 SVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 177
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A MTAE EMA+DE+K +R KE+I
Sbjct: 178 KDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEIRKNLTKEAI 224
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 225 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE-------------------AKEEKKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE +KE+ S + P ++ + +D
Sbjct: 79 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSD 138
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 139 SVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 198
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A MTAE EMA+DE+K +R KE+I
Sbjct: 199 KDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKEAI 245
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE-------------------AKEEKKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE +KE+ S + P ++ + +D
Sbjct: 79 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETDASDSFIPSFPRAPSTSD 138
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 139 SVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 198
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A MTAE EMA+DE+K +R KE+I
Sbjct: 199 KDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEIRKNLTKEAI 245
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 122/176 (69%), Gaps = 16/176 (9%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQ-VGDLDMDGLA-SLEELATELEEAIYNEFKNTDN 98
+P + + N TD VRL+CREM+ N+++ GDL DG+ S EELA +EE+I++ K+T
Sbjct: 122 FPQKANINTTDDVRLRCREMITNALKGAGDLP-DGICKSPEELADLIEESIFSSNKSTSA 180
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YKN++RSR+ NL+D KNP L N + G I SK A MTA+ EMA+DE
Sbjct: 181 KYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTAD-------------EMASDE 227
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+K R F+K+ ID +QLA +QGTKTDLLKCGKC K +CTYNQ+QTRSADEPMTT
Sbjct: 228 VKKQRAAFVKQGIDASQLAQIQGTKTDLLKCGKCGKSDCTYNQIQTRSADEPMTTF 283
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 138 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 195
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 196 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 242
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 243 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 299
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 137/223 (61%), Gaps = 37/223 (16%)
Query: 12 GISNNKDSSSKKK----------EAKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KDS KKK EA+EE +K++ + V+ +P ++ +
Sbjct: 79 GPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFP--RAPST 136
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRI+
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRIS 196
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KNP L +N + G I A MTAE EMA+DE+K +R KE
Sbjct: 197 NLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKE 243
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMT
Sbjct: 244 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 61 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 118
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 119 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 165
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 166 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 222
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 61 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 118
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 119 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 165
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 166 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 222
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSCFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
++ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 LSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 134/210 (63%), Gaps = 26/210 (12%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVT---QYPPQKSHNLTDSVRLKCREMLQNS 64
P P SN DSSSK + D PS++ +P ++ + +DSVR+KCREML +
Sbjct: 112 PEPREESN--DSSSKNEPV------DVMPSISLISTFP--QAPSTSDSVRIKCREMLSQA 161
Query: 65 IQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYI 124
+Q GD + A ++LA ++EE I+ EFKNTD +YKNRVRSRIANLKD KNP L ++ +
Sbjct: 162 LQAGDDYIAIGADCDQLAAQIEEYIFCEFKNTDPKYKNRVRSRIANLKDIKNPNLRKSVL 221
Query: 125 FGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
G +S ++A MTA+ EMA+DE+K +R KE+I D Q++ GT+T
Sbjct: 222 CGNVSPDRMAKMTAQ-------------EMASDELKLIRKNLTKEAIRDHQVSQTGGTQT 268
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DL CGKCKK+ CTY QVQTRSADEPMTT
Sbjct: 269 DLFTCGKCKKKRCTYTQVQTRSADEPMTTF 298
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 122/187 (65%), Gaps = 15/187 (8%)
Query: 30 KKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE 87
+K++ S + P ++ + +DSVR+KCREML +++ GD + A EEL +++EE
Sbjct: 105 RKDEANASSDSFIPSFPRAPSTSDSVRVKCREMLAAALKTGDDYIAIGADDEELGSQIEE 164
Query: 88 AIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADE 147
AIY E +NTD +YKNRVRSRIANLKD KNP L +N + G I A MTAE
Sbjct: 165 AIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------- 216
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSA 207
EMA+DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSA
Sbjct: 217 -----EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSA 271
Query: 208 DEPMTTL 214
DEPMTT
Sbjct: 272 DEPMTTF 278
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE-------------------AKEEKKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE +KE+ S + P ++ + +D
Sbjct: 58 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSD 117
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 118 SVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 177
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A +TAE EMA+DE+K +R KE+I
Sbjct: 178 KDAKNPNLRKNVLCGNIPPDLFARLTAE-------------EMASDELKEMRKNLTKEAI 224
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 225 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 119/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ G+ + A EEL +++EEAIY E +NTD
Sbjct: 126 VSSFP--RAPSTSDSVRLKCREMLAAALRTGEDYIAIGADEEELGSQIEEAIYQEIRNTD 183
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 184 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 230
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 231 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 287
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE-------------------AKEEKKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE +KE+ S + P ++ + +D
Sbjct: 79 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSD 138
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR+KCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 139 SVRMKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 198
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A +TAE EMA+DE+K +R KE+I
Sbjct: 199 KDAKNPNLRKNVLCGNIPPDLFARLTAE-------------EMASDELKEMRKNLTKEAI 245
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + ++LA+E+E+ IY E K+
Sbjct: 181 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDDFKDYGVNCDKLASEIEDHIYQELKS 238
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE EMA
Sbjct: 239 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAE-------------EMA 285
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 286 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 344
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 124/183 (67%), Gaps = 30/183 (16%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDL----DMDGLASLEELATELEEAI---YN 91
T +P + T+SVRLKCRE++ ++++ D+ D+DGLA+ ++EE I +
Sbjct: 83 TSFPA----DTTNSVRLKCRELISSALKCDDMPDGCDLDGLAA------KIEEYILSWHC 132
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
EF +T+ +YKNRVRSR++NLKD KNP L N + GAI ++A MTA+
Sbjct: 133 EFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGAIDPDRIARMTAD------------ 180
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
EMA+DEMK +R KF KE+I+D Q+A GTKTDLLKCGKC+K NCTYNQVQTRSADEPM
Sbjct: 181 -EMASDEMKQMRQKFTKEAINDHQMAVTGGTKTDLLKCGKCRKSNCTYNQVQTRSADEPM 239
Query: 212 TTL 214
TT
Sbjct: 240 TTF 242
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 118/177 (66%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EM +D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMPSD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q++ GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 ELKEMRKNLTKEAIREHQMSKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 172 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHIYQELKS 229
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EMA
Sbjct: 230 TDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE-------------EMA 276
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 277 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 186 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 245
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE+K LRN +E+
Sbjct: 246 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELKELRNAMTQEA 292
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 293 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 336
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 390 DSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 449
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 450 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 496
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 497 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 540
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 115/164 (70%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML ++++ D + + E++A+E+E+ I+ E K+TD +Y+NRVRSRI+N
Sbjct: 216 DSVRDKCIEMLTAALRMDDDYKEFGVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISN 275
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L RN + GAI S +A MTAE EMA+DE+K LRN +E+
Sbjct: 276 LKDPKNPALRRNVLCGAIEPSLIARMTAE-------------EMASDELKKLRNAMTQEA 322
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 323 IREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTF 366
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DS+R KC EML +++ D D + E + E+E+ IY E K TD +YKNRVRSRI+N
Sbjct: 246 DSIRDKCIEMLTAALRTDDDYKDYGTNCEAMGAEIEDYIYQETKATDMKYKNRVRSRISN 305
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + GAI S++A+MTAE EMA+DE+K LRN +E+
Sbjct: 306 LKDPKNPNLRKNVLAGAIELSRIASMTAE-------------EMASDELKQLRNVLTQEA 352
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 353 IREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTF 396
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 99/125 (79%), Gaps = 13/125 (10%)
Query: 90 YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
Y+EF NTD +YKNR+RSR+ANLKDPKNP L N++ GA++A +LA MT E
Sbjct: 22 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPE---------- 71
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
EMA+DEMK LR KF+KE+I+DAQLATVQGTKTDLLKC KCKKRNCTYNQ+QTRSADE
Sbjct: 72 ---EMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADE 128
Query: 210 PMTTL 214
PMTT
Sbjct: 129 PMTTF 133
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 17/201 (8%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMD 73
S+ KD SS KK+ + + P +T +PP D+VR KCREML ++Q + +
Sbjct: 105 SDTKDQSSNKKQ--DPPRTISTPKITTFPPIPI--TCDAVRNKCREMLTAALQTDNDHVA 160
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
A E L+ ++EE IY + KNTD +YKNRVRSRI+NLKD KNP L +N + GAI+ ++
Sbjct: 161 IGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQI 220
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A MT+E EMA++E+K +R KE+I + Q+A GT+TDL CGKCK
Sbjct: 221 AVMTSE-------------EMASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCK 267
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
K+NCTY QVQTRS+DEPMTT
Sbjct: 268 KKNCTYTQVQTRSSDEPMTTF 288
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 149 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHIYQELKS 206
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EMA
Sbjct: 207 TDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE-------------EMA 253
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 254 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 312
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 212 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKADDDYKDYGINCDKMASEIEDHIYQELKS 269
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EMA
Sbjct: 270 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMA 316
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 317 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 375
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PS+ P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 171 PSICLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHIYQELKS 228
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EMA
Sbjct: 229 TDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE-------------EMA 275
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 276 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 334
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 291
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 292 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 186 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 245
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 246 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 292
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 293 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 336
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 291
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 292 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 291
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 292 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+V P + DSVR KC EML +++ D D + ++LA+E+E+ IY E K+
Sbjct: 171 PAVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKS 228
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE EMA
Sbjct: 229 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMA 275
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 276 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 334
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 120/179 (67%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 177 PSVCLLAP--CYLTGDSVRDKCVEMLAAALKAEDDYKDYGVNCDKMASEIEDHIYQELKS 234
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS+ +A MTAE EMA
Sbjct: 235 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISSGLIAKMTAE-------------EMA 281
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQ+QTRSADEPMTT
Sbjct: 282 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQMQTRSADEPMTTF 340
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+V P + DSVR KC EML +++ D D + ++LA+E+E+ IY E K+
Sbjct: 171 PAVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKS 228
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE EMA
Sbjct: 229 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMA 275
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 276 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 334
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + ++LA+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 126 DSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKSTDMKYRNRVRSRISN 185
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAIS +A MTAE EMA+DE++ LRN +E+
Sbjct: 186 LKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMASDELRELRNAMTQEA 232
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 233 IREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 276
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 164 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 223
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 224 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 270
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 271 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 314
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 119/179 (66%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+V P + DSVR KC EML +++ D D + ++LA+E+E+ IY E K+
Sbjct: 171 PAVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKS 228
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE EMA
Sbjct: 229 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMA 275
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 276 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 334
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 157 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 216
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 217 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 263
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 264 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 307
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 133/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE----------AKEE---------KKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE AKEE +KE+ S + P ++ + +D
Sbjct: 58 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNGSNRKEETNASDSFIPSFPRAPSTSD 117
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SV ++CR ML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 118 SVPMRCRGMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 177
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A MTAE EMA+DE+K + KE+I
Sbjct: 178 KDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMHKNLTKEAI 224
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 225 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 267
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 291
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 292 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 291
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 292 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 129/209 (61%), Gaps = 18/209 (8%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPS---VTQYPPQKSHNLTDSVRLKCREMLQNSI 65
PP S++K++ K +++ + + PS +T +PP D+VR KCREML ++
Sbjct: 386 GPPPTSSSKEAPEAKDPSRKRPELPRVPSAPRITTFPPVPV--TCDAVRNKCREMLTAAL 443
Query: 66 QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
Q M A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN +
Sbjct: 444 QTDHDHMAVGADCEGLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLC 503
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTD 185
G I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TD
Sbjct: 504 GVITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTD 550
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
L CG+C+++NCTY QVQTRS+DEPMTT
Sbjct: 551 LFTCGRCRRKNCTYTQVQTRSSDEPMTTF 579
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 133/223 (59%), Gaps = 33/223 (14%)
Query: 12 GISNNKDSSSKKKE----------AKEE---------KKEDKKPSVTQYPP-QKSHNLTD 51
G S +KDS KKKE AKEE +KE+ S + P ++ + +D
Sbjct: 79 GPSTDKDSDEKKKEPAISSQNSPEAKEESSSSSNGSNRKEETNASDSFIPSFPRAPSTSD 138
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SV ++CR ML +++ GD + A EEL +++EEAIY E +NTD +YKNRVRSRIANL
Sbjct: 139 SVPMRCRGMLAAALRTGDDYIAIGADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANL 198
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KNP L +N + G I A MTAE EMA+DE+K + KE+I
Sbjct: 199 KDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMHKNLTKEAI 245
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 288
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 118/177 (66%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSV+LKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 127 VSSFP--RAPSTSDSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 184
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 185 MKYKNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAE-------------EMASD 231
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K + KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEP+TT
Sbjct: 232 ELKEMWKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTF 288
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DS+R KC EML +++ + + A+ E + E+E+ IY E K TD +YKNRVRSRI+N
Sbjct: 457 DSIRDKCIEMLAAALRTDNDYKEFGANCESMGAEIEDHIYQEIKATDMKYKNRVRSRISN 516
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G+I ++ATM+AE EMA+DE+K LRN +E+
Sbjct: 517 LKDPKNPGLRKNVLAGSIELRRIATMSAE-------------EMASDELKQLRNVLTQEA 563
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 564 IREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTF 607
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 118/179 (65%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+V P + DSVR KC EML +++ D D + ++LA+E+E IY E K+
Sbjct: 171 PAVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIETHIYQELKS 228
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE EMA
Sbjct: 229 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMA 275
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 276 SDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 334
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 128/201 (63%), Gaps = 17/201 (8%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMD 73
S+ KD SS KK+ + + P +T +PP D+VR KCREML ++Q + +
Sbjct: 104 SDTKDQSSNKKQ--DPPRTLTTPKITTFPPIPI--TCDAVRNKCREMLTAALQTDNDHIA 159
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
A E L+ ++EE IY + KNTD +YKNRVRSRI+NLKD KNP L +N + GAI+ ++
Sbjct: 160 IGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQI 219
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A MT+E EMA++E+K +R KE+I + Q+A GT+TDL CGKCK
Sbjct: 220 AVMTSE-------------EMASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCK 266
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
K+NCTY QVQTRS+DEPMTT
Sbjct: 267 KKNCTYTQVQTRSSDEPMTTF 287
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 118/179 (65%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PSV P + DSVR KC EML +++ D D + +++A+E+E+ IY E K+
Sbjct: 316 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHIYQELKS 373
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKDP+NP L RN + G ISA +A MTAE EMA
Sbjct: 374 TDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAE-------------EMA 420
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 421 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 479
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 129/212 (60%), Gaps = 22/212 (10%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ----KSHNLT-DSVRLKCREMLQ 62
P P + + S SK E K PS + P S LT DSVR KC EML
Sbjct: 141 PKRPSLERSNSSRSKV----ETPKTPSSPSTPTFAPAVCLLASCYLTGDSVRDKCVEMLS 196
Query: 63 NSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRN 122
+++ D D + ++LA+E+E+ IY E K+TD +Y+NRVRSRI+NLKDP+NP L RN
Sbjct: 197 AALKAEDDFKDYGVNCDKLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRN 256
Query: 123 YIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGT 182
+ G IS +A MTAE EMA+DE++ LRN +E+I + Q+A GT
Sbjct: 257 VLSGTISPELIAKMTAE-------------EMASDELRELRNAMTQEAIREHQMAKTGGT 303
Query: 183 KTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 304 TTDLLRCSKCKKKNCTYNQVQTRSADEPMTTF 335
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 113/165 (68%), Gaps = 14/165 (8%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+D VR+KCRE+L ++Q + +G A ELA +E++IYNEFKNT+ +YK RVRSR+A
Sbjct: 146 SDPVRIKCRELLTKALQTPP-EKEGCAPACELAAGIEQSIYNEFKNTEMKYKTRVRSRVA 204
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D KNP L ++G I ++A+MT+E EMA+D++K LR KF KE
Sbjct: 205 NLRDSKNPKLREGVMYGFIPPERMASMTSE-------------EMASDDLKKLREKFTKE 251
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I+D Q+A GT+TD KCG+C KR C YNQVQTRSADEPMTT
Sbjct: 252 AINDHQMAQQGGTETDFFKCGRCGKRRCQYNQVQTRSADEPMTTF 296
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 118/177 (66%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSV+LKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 110 VSSFP--RAPSTSDSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 167
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 168 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 214
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K + KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEP+TT
Sbjct: 215 ELKEMWKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTF 271
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 116/165 (70%), Gaps = 15/165 (9%)
Query: 51 DSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
DSVR KC EML ++V GD G+ + E+LA+E+E+ IY E K+TD +Y+NRVRSRI+
Sbjct: 118 DSVRDKCVEMLAAVLKVDGDYKEFGV-NCEQLASEIEDHIYQELKSTDMKYRNRVRSRIS 176
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+DP+NP L R+ + G I+AS++A MTAE EMA+DE+K LRN E
Sbjct: 177 NLRDPRNPALRRSVLCGGIAASRIARMTAE-------------EMASDELKELRNAMTLE 223
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 224 AIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 268
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 16/178 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA-IYNEFKNT 96
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EE IY E +NT
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEVPIYQEIRNT 184
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
D +YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+
Sbjct: 185 DMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMAS 231
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 DELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 289
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 124/202 (61%), Gaps = 20/202 (9%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMD 73
S D S K+ E + P +T +PP D+VR KCREML ++Q D D
Sbjct: 248 SEAPDPSRKRPELP---RAPSTPRITTFPPVPV--TCDAVRSKCREMLAAALQT-DRDHV 301
Query: 74 GL-ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
+ A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ +
Sbjct: 302 AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQ 361
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
+A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL CGKC
Sbjct: 362 IAVMTSE-------------EMASDELKEIRKTMTKEAIREHQMARTGGTQTDLFTCGKC 408
Query: 193 KKRNCTYNQVQTRSADEPMTTL 214
+K+NCTY QVQTRS+DEPMTT
Sbjct: 409 RKKNCTYTQVQTRSSDEPMTTF 430
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 118/178 (66%), Gaps = 16/178 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA-IYNEFKNT 96
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EE IY E +NT
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEVPIYQEIRNT 184
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
D +YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+
Sbjct: 185 DMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMAS 231
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 232 DELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 289
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 13/167 (7%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
N DSVR KC EML +++ + + + + +A E+E+ IY E K TD +YKNRVRSR
Sbjct: 320 NTGDSVRDKCIEMLAAALRTDNDYKEFGTNCDSMAAEIEDHIYQEIKATDMKYKNRVRSR 379
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
I+NLKDPKNP L +N + G ++ S++A+M+AE EMA+DE+K LRN
Sbjct: 380 ISNLKDPKNPGLRKNVLAGTLALSRIASMSAE-------------EMASDELKQLRNTLT 426
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E+I + Q+A GT TDLL+CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 427 QEAIREHQMAKTGGTSTDLLQCGKCKKKNCTYNQVQTRSADEPMTTF 473
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DS+R KC EML +++ D + + + + E+E+ IY E K TD +YKNRVRSRI+N
Sbjct: 357 DSIRDKCIEMLAAALRTDDDHKEFGVNCDSMGAEIEDYIYQEIKATDMKYKNRVRSRISN 416
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L RN + G+I S++A+M+AE EMA+DE+K LRN +E+
Sbjct: 417 LKDPKNPGLRRNVLAGSIELSRIASMSAE-------------EMASDELKQLRNVLTQEA 463
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+CGKC K+NCTYNQVQTRSADEPMTT
Sbjct: 464 IREHQMAKTGGTTTDLLQCGKCNKKNCTYNQVQTRSADEPMTTF 507
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EM+ ++++ D + E LA E+EE IY+E K TD +Y+NR+RSRI+N
Sbjct: 482 DSVRDKCVEMVASALKTDDDYKQFGTNCERLAWEIEECIYSEVKVTDMKYRNRIRSRISN 541
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G ++ +ATMTAE EMA+DE++ LRN +E+
Sbjct: 542 LKDPKNPNLRKNVLCGVVTPQSIATMTAE-------------EMASDELRELRNTMTQEA 588
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDLL+C KCKK+NC+YNQVQTRSADEPMTT
Sbjct: 589 IREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTF 632
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EM+ ++++ D + E LA E+EE IY+E K TD +Y+NR+RSRI+N
Sbjct: 482 DSVRDKCVEMVASALKTDDDYKQFGTNCERLAWEIEECIYSEVKVTDMKYRNRIRSRISN 541
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G ++ +ATMTAE EMA+DE++ LRN +E+
Sbjct: 542 LKDPKNPNLRKNVLCGVVTPQSIATMTAE-------------EMASDELRELRNTMTQEA 588
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDLL+C KCKK+NC+YNQVQTRSADEPMTT
Sbjct: 589 IREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTF 632
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EM+ ++++ D + E LA E+EE IY+E K TD +Y+NR+RSRI+N
Sbjct: 482 DSVRDKCVEMVASALKTDDDYKQFGTNCERLAWEIEECIYSEVKVTDMKYRNRIRSRISN 541
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G ++ +ATMTAE EMA+DE++ LRN +E+
Sbjct: 542 LKDPKNPNLRKNVLCGVVTPQSIATMTAE-------------EMASDELRELRNTMTQEA 588
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDLL+C KCKK+NC+YNQVQTRSADEPMTT
Sbjct: 589 IREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTF 632
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 17/204 (8%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQ---YPPQKSHNLTDSVRLKCREMLQNSIQVGDL 70
S++ K+ EKKE +PS + P + D VRLK REMLQ++++ G++
Sbjct: 115 SDDSGPQDAKRSRPSEKKEPTEPSGNASRGFFPVHTLTTNDQVRLKAREMLQSALESGNI 174
Query: 71 DMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISA 130
G E LA +E +IY+ F NTD +YK RVR+R+ NL+D NP L N + G +S
Sbjct: 175 P-SGAYESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSP 233
Query: 131 SKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCG 190
KLA+MT+E EMA+ EMK LR K+ KE+I+D Q+A GT+TDLL+CG
Sbjct: 234 DKLASMTSE-------------EMASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCG 280
Query: 191 KCKKRNCTYNQVQTRSADEPMTTL 214
KCK+ CTYNQVQTRSADEPMTT
Sbjct: 281 KCKQTKCTYNQVQTRSADEPMTTF 304
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 25/205 (12%)
Query: 20 SSKKKEAKEEKKEDKK----------PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+S KEA E + +K P +T +PP D+VR KCREML ++Q
Sbjct: 134 TSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPV--TCDAVRTKCREMLTAALQTDH 191
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
+ A E LA ++EE I+ + NTD +YKNRVRSR++NLKD KNP L RN + GAI+
Sbjct: 192 DHVAIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRNVLCGAIT 251
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL C
Sbjct: 252 PQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTC 298
Query: 190 GKCKKRNCTYNQVQTRSADEPMTTL 214
GKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 299 GKCRKKNCTYTQVQTRSSDEPMTTF 323
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 117/177 (66%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 144 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTD 201
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+ KD KNP L +N + G I A MTAE EMA+D
Sbjct: 202 MKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 248
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 249 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 305
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + ++LA+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 129 DSVRDKCVEMLSAALKAEDNFKDYGVNCDKLASEIEDHIYQELKSTDMKYRNRVRSRISN 188
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAIS +A MTAE EMA+DE++ LRN +E+
Sbjct: 189 LKDPRNPGLRRNVLSGAISPELIAKMTAE-------------EMASDELRELRNAMTQEA 235
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSAD PMTT
Sbjct: 236 IREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADAPMTTF 279
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P +T +PP D+VR KCRE+L ++Q M A E L+ ++EE I+ + N
Sbjct: 132 PRITTFPPVPV--TCDAVRNKCRELLTAALQTDHDHMAVGADCEGLSAQIEECIFRDVGN 189
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E EMA
Sbjct: 190 TDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSE-------------EMA 236
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRS+DEPMTT
Sbjct: 237 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTF 295
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 115/167 (68%), Gaps = 16/167 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASL---EELATELEEAIYNEFKNTDNRYKNRVRSR 107
D VR +C++ML N+++V D+D L EELA +E+ IY EF N+D RYKNRVRSR
Sbjct: 140 DVVRERCKQMLVNALKVAIPDLDDGEELQDPEELAGIIEDCIYTEFGNSDLRYKNRVRSR 199
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
++NL+D KNP L R + G I A K+A+M AE EMA++ MK +R KF
Sbjct: 200 VSNLQDSKNPDLRRMVLRGTIPAEKIASMAAE-------------EMASEAMKQMRQKFT 246
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I+D QLA +GT++ LL CGKC+K+NCTYNQ+QTRSADEPMTT
Sbjct: 247 KEAINDHQLAHTEGTRSALLTCGKCRKKNCTYNQMQTRSADEPMTTF 293
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 124/198 (62%), Gaps = 21/198 (10%)
Query: 24 KEAKEEKKEDKKPSVT-------QYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA 76
+EAK + +KK S + P + TD VRLK REMLQ++++ G++ G
Sbjct: 122 QEAKRSRPSEKKESTEISGNASRGFFPVHTLTTTDQVRLKAREMLQSALESGNIP-SGAY 180
Query: 77 SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
E LA +E +IY+ F NTD +YK RVR+R+ NL+D NP L N + G +S KLA+M
Sbjct: 181 ESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASM 240
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRN 196
T+E EMA+ EMK LR K+ KE+I+D Q+A GT+TDLL+CGKCK+
Sbjct: 241 TSE-------------EMASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCGKCKQTK 287
Query: 197 CTYNQVQTRSADEPMTTL 214
CTYNQVQTRSADEPMTT
Sbjct: 288 CTYNQVQTRSADEPMTTF 305
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 136/232 (58%), Gaps = 44/232 (18%)
Query: 12 GISNNKDSSSKKK----------EAKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KD KKK EA+EE +KE+ + V+ +P ++ +
Sbjct: 124 GPSTDKDPEEKKKDTAVTSQNSPEAREESSSSGNISSRKEEANARDTYVSSFP--RAPST 181
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE-------AIYNEFKNTDNRYKN 102
+DSVRLKCREML +++ GD + A EEL +++EE IY E +NTD +YKN
Sbjct: 182 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILSVLVPIYQEIRNTDMKYKN 241
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
RVRSRI+NLKD KNP L +N + G I A MTAE EMA+DE+K +
Sbjct: 242 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEM 288
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 289 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 340
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 127/201 (63%), Gaps = 21/201 (10%)
Query: 20 SSKKKEAKEEKKEDKKPSVTQYPPQKSHNL--TDSVRLKCREMLQNSIQVGDLDM---DG 74
SS K++ + P+ + P KS N+ TD VRL+CREM+ N+++ G D DG
Sbjct: 101 SSGKEDNAKGGSSGNGPAPKGFVP-KSTNIGTTDDVRLRCREMISNALK-GTTDAGLPDG 158
Query: 75 -LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
+ EE +EEAI++ FK+T +YKN++RSR+ NL+D KNP L N + G I K
Sbjct: 159 TVKPPEEFGDLIEEAIFSNFKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIDPPKF 218
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A MTA+ EMA+DE+K R F+K+ ID +QLA +QGTKTDLLKCGKCK
Sbjct: 219 AVMTAD-------------EMASDEIKNQRAAFVKQGIDASQLAHIQGTKTDLLKCGKCK 265
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
+ NCTYNQ+QTRSADEPM T
Sbjct: 266 QSNCTYNQIQTRSADEPMATF 286
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 15/208 (7%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ 66
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 94 MPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQ 151
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
+ A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + G
Sbjct: 152 TDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
AI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 212 AITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDL 258
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 259 FTCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 20/211 (9%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPS---VTQYPPQKSHNLTDSVRLKCREMLQN 63
P P S++KD+S +++ + + PS +T +PP D+VR KCREML
Sbjct: 150 MPLP--TSSSKDASEAVDPSRKRSEMPRMPSTPRITTFPPVPV--TCDAVRNKCREMLSA 205
Query: 64 SIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNY 123
++Q + A LE L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN
Sbjct: 206 ALQTDHDHVAIGADLERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNV 265
Query: 124 IFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK 183
+ GAI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+
Sbjct: 266 LCGAITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQ 312
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TDL C KC+K+NCTY QVQTRS+DEPMTT
Sbjct: 313 TDLFTCSKCRKKNCTYTQVQTRSSDEPMTTF 343
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 15/208 (7%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ 66
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 67 MPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQ 124
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
+ A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + G
Sbjct: 125 TDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 184
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
AI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 185 AITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDL 231
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 232 FTCGKCRKKNCTYTQVQTRSSDEPMTTF 259
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 118/181 (65%), Gaps = 19/181 (10%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE----AIYNEF 93
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EE IY E
Sbjct: 87 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILLPIYQEI 144
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
+NTD +YKNRVRSRI+NLKD KNP L +N + G I A MTAE E
Sbjct: 145 RNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------E 191
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 192 MASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTT 251
Query: 214 L 214
Sbjct: 252 F 252
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 15/208 (7%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ 66
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 94 MPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQ 151
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
+ A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + G
Sbjct: 152 TDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
AI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 212 AITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDL 258
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 259 FTCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 123/205 (60%), Gaps = 25/205 (12%)
Query: 20 SSKKKEAKEEKKEDKK----------PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+S KEA E K +K P +T +PP D+VR KCREML ++Q
Sbjct: 98 TSSSKEAAEAKDSSRKRPELPRMPSAPRITTFPPVPVT--CDAVRNKCREMLTAALQTDR 155
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
M A E L+ ++EE I+ + NTD +Y+NRVRSRI+NLKD KNP L RN + G I+
Sbjct: 156 DHMAVGADCEGLSAQIEECIFRDVGNTDMKYRNRVRSRISNLKDAKNPDLRRNVLCGVIT 215
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL C
Sbjct: 216 PQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTC 262
Query: 190 GKCKKRNCTYNQVQTRSADEPMTTL 214
GKC+++NCTY QVQTRS+DEPMTT
Sbjct: 263 GKCRRKNCTYTQVQTRSSDEPMTTF 287
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML +++Q D + A E +A ++EE IY + KNTD +YKNRVRSRI+N
Sbjct: 111 DAVRNKCREMLTSALQADDDYIAIGADCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISN 170
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + GAI+ ++A MT+E EMA++E+K +R KE+
Sbjct: 171 LKDSKNPELKKNVLCGAITPEQIAVMTSE-------------EMASNELKEIRKAMTKEA 217
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL CGKCKK+NCTY QVQTRS+DEPMTT
Sbjct: 218 IREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTF 261
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 17/201 (8%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMD 73
N++D SS K++ + K + P D+VR KCREML ++Q D +
Sbjct: 104 GNSRDQSSNKRQEPPKTPTTPKITTFPPAPV----TCDAVRNKCREMLTTALQADDDYIA 159
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
A E +A ++EE IY + KNTD +YKNRVRSRI+NLKD KNP L +N + GAI+ ++
Sbjct: 160 IGADCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQI 219
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A MT+E EMA++E+K +R KE+I + Q+A GT+TDL CGKCK
Sbjct: 220 AVMTSE-------------EMASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCK 266
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
K+NCTY QVQTRS+DEPMTT
Sbjct: 267 KKNCTYTQVQTRSSDEPMTTF 287
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 115/179 (64%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P +T +PP D+VR KCREML ++Q + A E L+ ++EE I+ + N
Sbjct: 123 PRITTFPPVPV--TCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVGN 180
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E EMA
Sbjct: 181 TDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSE-------------EMA 227
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE+K +R KE+I + Q+A GT+TDL CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 228 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 117/177 (66%), Gaps = 17/177 (9%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNTD 97
T +PP + TDSVR KCRE+L ++Q GD G A E +A ++E+ IY EFK+TD
Sbjct: 127 TMFPP--APVTTDSVRTKCRELLVAALQTDGDHQTIG-ADCEHMAAQIEDYIYQEFKSTD 183
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YK R+RSRI+NLKD KNP L RN + G IS ++A+MTAE EMA+
Sbjct: 184 MKYKTRLRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAE-------------EMASP 230
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KESI + QL+ V GT+TD+ CGKCK +NCTY QVQTRSADEPMTT
Sbjct: 231 ELKEIRKALTKESIREHQLSKVGGTETDMFVCGKCKGKNCTYTQVQTRSADEPMTTF 287
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 124/207 (59%), Gaps = 15/207 (7%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 95 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQT 152
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ A + L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + GA
Sbjct: 153 AHDHVAIGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGA 212
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 213 ITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLF 259
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 260 TCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EM+ ++++ D + E LA E+EE IY+E K TD +Y+NR+RSRI+N
Sbjct: 126 DSVRDKCVEMVASALKTDDDYKQFGTNCERLAWEIEECIYSEVKVTDMKYRNRIRSRISN 185
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G ++ +ATMTAE EMA+DE++ LRN +E+
Sbjct: 186 LKDPKNPNLRKNVLCGVVTPQSIATMTAE-------------EMASDELRELRNTMTQEA 232
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDLL+C KCKK+NC+YNQVQTRSADEPMTT
Sbjct: 233 IREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTF 276
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 135/231 (58%), Gaps = 43/231 (18%)
Query: 12 GISNNKDSSSKKKE----------------------AKEEKKEDKKPSVTQYPPQKSHNL 49
G SN++DS KKKE +++++ + V+ +P ++ +
Sbjct: 58 GPSNDRDSEEKKKEPAITSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFP--RAPST 115
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE------AIYNEFKNTDNRYKNR 103
+DSVRLKCREML +++ GD + A EEL +++EE IY E +NTD +YKNR
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILFQVPIYQEIRNTDMKYKNR 175
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
VRSRI+NLKD KNP L +N + G I A MTAE EMA+DE+K +R
Sbjct: 176 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDELKEMR 222
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 223 KNLTREAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 273
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 128/207 (61%), Gaps = 26/207 (12%)
Query: 11 PGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTD-SVRLKCREMLQNSIQVGD 69
P +S D+S K D KP +P + +TD SVR KCREM+ NS+QV
Sbjct: 108 PALSTKSDTSDAPTTPK-----DNKP--ISFP----NTITDESVRGKCREMIVNSLQVQG 156
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
+ + + EE+A E+ I+ EFK+T+ +YK R+RSR+ NL+DPKNPML + G IS
Sbjct: 157 -EFEAVTKPEEVAAACEQLIFEEFKDTNVKYKQRIRSRVNNLRDPKNPMLKVRVLGGEIS 215
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
++LA MT+E EMA+DEMK LR +F KE I +AQ+A GTKT+L KC
Sbjct: 216 PARLAVMTSE-------------EMASDEMKKLRQEFTKEGIREAQMAKNAGTKTNLFKC 262
Query: 190 GKCKKRNCTYNQVQTRSADEPMTTLHH 216
G+C KR TYNQ+QTRSADEPMTT +
Sbjct: 263 GRCGKRETTYNQLQTRSADEPMTTFVY 289
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 137/235 (58%), Gaps = 47/235 (20%)
Query: 12 GISNNKDSSSKKK----------EAKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KDS KKK EA+EE +K++ + V+ +P ++ +
Sbjct: 58 GPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFP--RAPST 115
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE----------AIYNEFKNTDNR 99
+DSVRLKCREML +++ GD + A EEL +++EE IY E +NTD +
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILCVYIHIVPIYQEIRNTDMK 175
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+DE+
Sbjct: 176 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDEL 222
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 223 KEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 277
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 115/165 (69%), Gaps = 15/165 (9%)
Query: 51 DSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
DSVR KC EML ++++ GD G+ + +++A+E+E+ IY E K TD +Y+NRVRSRI+
Sbjct: 199 DSVRDKCVEMLSAALKMDGDYKEYGV-NCDKMASEIEDHIYQELKGTDMKYRNRVRSRIS 257
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKDP+NP L RN + GAIS S +A MTAE EMA+DE+K LR+ E
Sbjct: 258 NLKDPRNPSLRRNVLCGAISTSLIARMTAE-------------EMASDELKELRSAMTLE 304
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 305 AIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 349
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML ++Q D + A E +A ++EE IY + KNTD +YKNRVRSRI+N
Sbjct: 137 DAVRNKCREMLTAALQADDDYIAIGADCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISN 196
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + GAI+ ++A MT+E EMA++E+K +R KE+
Sbjct: 197 LKDSKNPELKKNVLCGAITPEQIAVMTSE-------------EMASNELKEIRKAMTKEA 243
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL CGKCKK+NCTY QVQTRS+DEPMTT
Sbjct: 244 IREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTF 287
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 15/207 (7%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 71 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQT 128
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ A + L+ ++EE I+ + NTD +YKNRVRSRI+NLKD +NP L RN + GA
Sbjct: 129 AHDHVAIGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGA 188
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 189 ITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLF 235
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 236 TCGKCRKKNCTYTQVQTRSSDEPMTTF 262
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 124/207 (59%), Gaps = 15/207 (7%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 95 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQT 152
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ A + L+ ++EE I+ + NTD +YKNRVRSRI+NLKD +NP L RN + GA
Sbjct: 153 AHDHVAIGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGA 212
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 213 ITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLF 259
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 260 TCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 115/179 (64%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P +T +PP D+VR KCREML ++Q + A + L+ ++EE I+ + N
Sbjct: 123 PRITTFPPVPV--TCDAVRNKCREMLTAALQTDHDHVAIGADCQRLSAQIEECIFRDVGN 180
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E EMA
Sbjct: 181 TDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSE-------------EMA 227
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE+K +R KE+I + Q+A GT+TDL CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 228 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 123/205 (60%), Gaps = 25/205 (12%)
Query: 20 SSKKKEAKEEKKEDKK----------PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+S KEA E + +K P +T +PP D+VR KCREML ++Q
Sbjct: 98 TSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPV--TCDAVRTKCREMLTAALQTDH 155
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
+ A E LA ++EE I+ + NTD +YKNRVRSR++NLKD KNP L R + GAI+
Sbjct: 156 DHVAIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAIT 215
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL C
Sbjct: 216 PQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTC 262
Query: 190 GKCKKRNCTYNQVQTRSADEPMTTL 214
GKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 263 GKCRKKNCTYTQVQTRSSDEPMTTF 287
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 123/204 (60%), Gaps = 25/204 (12%)
Query: 20 SSKKKEAKEEKKEDKK----------PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+S KEA E + +K P +T +PP D+VR KCREML ++Q
Sbjct: 98 TSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPV--TCDAVRTKCREMLTAALQTDH 155
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
+ A E LA ++EE I+ + NTD +YKNRVRSR++NLKD KNP L R + GAI+
Sbjct: 156 DHVAIGADCECLAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAIT 215
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL C
Sbjct: 216 PQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTC 262
Query: 190 GKCKKRNCTYNQVQTRSADEPMTT 213
GKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 263 GKCRKKNCTYTQVQTRSSDEPMTT 286
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 120/177 (67%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+ +P ++ +DSVR+KCREML N++Q GD + + +EL ++EE I+ EFKNTD
Sbjct: 135 IATFP--RAPGTSDSVRIKCREMLSNALQTGDDYITIGSDCDELGAQIEECIFLEFKNTD 192
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L RN + G +S ++A MTAE EMA+D
Sbjct: 193 MKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAE-------------EMASD 239
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I D Q+AT GT+TDL CGKCKK+ CTY QVQTRSADEPMTT
Sbjct: 240 ELKEMRKNLTKEAIRDHQVATSGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTF 296
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 130/207 (62%), Gaps = 18/207 (8%)
Query: 11 PGISNNKDSSSKKKEAKEEKKEDKKPS---VTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P ++++D+S + +++ + + PS +T +PP D+VR KCREML ++Q
Sbjct: 95 PLPTSSRDASEAQDPSRKRPELPRTPSTPRITTFPPVPVT--CDAVRNKCREMLAIALQT 152
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ A + L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + GA
Sbjct: 153 DHDHVAIGADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGA 212
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 213 ITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLF 259
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 260 TCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 123/208 (59%), Gaps = 15/208 (7%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ 66
P P + ++ ++ E + P +T +PP D+VR KCREML ++Q
Sbjct: 67 MPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRNKCREMLTAALQ 124
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
+ A L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + G
Sbjct: 125 TDHDHVAIGADCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 184
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
AI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 185 AITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDL 231
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 232 FTCGKCRKKNCTYTQVQTRSSDEPMTTF 259
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D +R KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 184 DCIRDKCVEMLSVALKAEDDYKDYGVNCDKMASEIEDHIYRELKSTDMKYRNRVRSRISN 243
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L RN + GAIS +A M AE EMA+DE+K LRN +E+
Sbjct: 244 LKDPKNPGLRRNVLSGAISTGLIAKMMAE-------------EMASDELKELRNAMTQEA 290
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+C KCKK+NCTYNQVQT SADEPMTT
Sbjct: 291 IREHQMAKTSGTNTDLLQCSKCKKKNCTYNQVQTLSADEPMTTF 334
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 17/180 (9%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFK 94
P +T++PP +DSVR KCREML+ ++Q GD G A E LA ++EE ++ E +
Sbjct: 116 PKMTRFPPLPVT--SDSVRTKCREMLRAALQTDGDHVAIG-ADCEFLAAQIEEVVFGEMQ 172
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
NTD +YKNR+RSRI+NLKD KNP L +N + G I ++A M+ E EM
Sbjct: 173 NTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCE-------------EM 219
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A++E+K +R K +I + Q+A GT+TDL CGKCKK+NCTY QVQ RSADEPMTT
Sbjct: 220 ASNELKEMRKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTF 279
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 17/180 (9%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFK 94
P +T++PP +DSVR KCREML+ ++Q GD G A E LA ++EE ++ E +
Sbjct: 116 PKMTRFPPLPVT--SDSVRTKCREMLRAALQTDGDHVAIG-ADCEFLAAQIEEVVFGEMQ 172
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
NTD +YKNR+RSRI+NLKD KNP L +N + G I ++A M+ E EM
Sbjct: 173 NTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCE-------------EM 219
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A++E+K +R K +I + Q+A GT+TDL CGKCKK+NCTY QVQ RSADEPMTT
Sbjct: 220 ASNELKEMRKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTF 279
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 118/186 (63%), Gaps = 22/186 (11%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD------LDMDGLAS-LEELATELEEA 88
PSV P + DSVR KC EML +++ D ++ D +AS +E+ EL
Sbjct: 149 PSVCLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHILELRSH 206
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY E K+TD +Y+NRVRSRI+NLKDP+NP L RN + G ISA +A MTAE
Sbjct: 207 IYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAE--------- 257
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSAD
Sbjct: 258 ----EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSAD 313
Query: 209 EPMTTL 214
EPMTT
Sbjct: 314 EPMTTF 319
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 114/179 (63%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P +T +PP ++VR KCREML ++Q + A E L+ ++EE I+ + N
Sbjct: 124 PRITTFPPVPI--TCNAVRNKCREMLTTALQTDHDHVAVGADCERLSAQIEECIFRDVGN 181
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKNRVRSRI+NLKD KNP L RN + G I+ ++A MT+E EMA
Sbjct: 182 TDMKYKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVMTSE-------------EMA 228
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE+K +R KE+I + Q+A GT+TDL CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 229 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 287
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 18/207 (8%)
Query: 11 PGISNNKDSSSKKKEAKEEKKEDKKPS---VTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P ++++D+S + +++ + + PS +T +PP D+VR KCREML ++Q
Sbjct: 102 PLPTSSRDASEAQDPSRKRPELPRAPSTPRITTFPPVPV--TCDAVRDKCREMLTAALQT 159
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+ A + L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN + GA
Sbjct: 160 DHDHVAIGADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGA 219
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 220 ITPQRIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLF 266
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K++CTY QVQTRS+DEPMTT
Sbjct: 267 TCGKCRKKSCTYTQVQTRSSDEPMTTF 293
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 137/235 (58%), Gaps = 47/235 (20%)
Query: 12 GISNNKDSSSKKK----------EAKEE---------KKED---KKPSVTQYPPQKSHNL 49
G S +KDS KKK EA+EE +K++ + V+ +P ++ +
Sbjct: 81 GPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNTSSRKDETNARDTYVSSFP--RAPST 138
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEE----------AIYNEFKNTDNR 99
+DSVRLKCREML +++ GD + A EEL +++EE IY E +NTD +
Sbjct: 139 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILCVYIHNVPIYQEIRNTDMK 198
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YKNR++SRI+NLKD KNP L +N + G I A MTAE EMA+DE+
Sbjct: 199 YKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDEL 245
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 246 KEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 300
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D VR KC +M+ ++++ D + E LA E+EE IY + K TD +Y+NR+RSRI+N
Sbjct: 290 DPVRDKCVDMVASALKTDDDYKQFGTNCERLAWEIEECIYRDIKATDMKYRNRIRSRISN 349
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L +N + G ++ +ATMTAE EMA+DE++ LRN +E+
Sbjct: 350 LKDPKNPNLRKNVLCGVVTPQNIATMTAE-------------EMASDELRELRNTMTQEA 396
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDLL+C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 397 IREHQMAKTGGTTTDLLQCEKCKKKNCTYNQVQTRSADEPMTTF 440
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 116/177 (65%), Gaps = 17/177 (9%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EE I NTD
Sbjct: 127 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDIL--CVNTD 182
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G IS A MTAE EMA+D
Sbjct: 183 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAE-------------EMASD 229
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 230 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 286
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 117/179 (65%), Gaps = 15/179 (8%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PS+ P + DSVR KC EML +++ D + + +++A+E+E+ IY E K+
Sbjct: 167 PSICLLSP--CYLTGDSVRDKCVEMLSVALKAEDDYKNYGVNCDKMASEIEDHIYQELKS 224
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +Y+NRVRSRI+NLKD KNP L RN + GAIS +A M AE EMA
Sbjct: 225 TDMKYRNRVRSRISNLKDSKNPGLRRNVLSGAISTELIAKMMAE-------------EMA 271
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DE++ LRN +E+I + Q+A GT TDLL+CGKCKK+NCTYNQVQT SADEPMTT
Sbjct: 272 SDELRELRNAMTQEAIREHQMAKTSGTNTDLLQCGKCKKKNCTYNQVQTLSADEPMTTF 330
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 113/166 (68%), Gaps = 15/166 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY--NEFKNTDNRYKNRVRSRI 108
DSVR KC EML +++ D D + +++A+E+E+ I E K+TD +Y+NRVRSRI
Sbjct: 163 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHILELGELKSTDMKYRNRVRSRI 222
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
+NLKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +
Sbjct: 223 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQ 269
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 270 EAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 315
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 111/164 (67%), Gaps = 15/164 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML ++++ D + DG+ E L I+ E K+TD +Y+NRVRSRI+N
Sbjct: 240 DSVRDKCVEMLTAALRM-DGEWDGMVR-EIXFPXLAPHIFQELKSTDMKYRNRVRSRISN 297
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDPKNP L RN + GAI+ + +A MTAE EMA+DE+K LRN +E+
Sbjct: 298 LKDPKNPNLRRNVLCGAIAPALIARMTAE-------------EMASDELKELRNAMTQEA 344
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 345 IREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTF 388
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML ++Q + + E L+ ++EE IY + KNTD +YKNRVRSRI+N
Sbjct: 202 DAVRNKCREMLTAALQTDNDHIAIGTDCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISN 261
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + GAI+ ++A MT+E EMA++E+K +R KE+
Sbjct: 262 LKDSKNPDLRKNVLCGAITPEQIAVMTSE-------------EMASNELKEIRKAMTKEA 308
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL CGKCKK+NCTY QVQTRS+DEPMTT
Sbjct: 309 IREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTF 352
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 113/167 (67%), Gaps = 19/167 (11%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
D+VR KCREML +++Q D D +A EE+A ++EE IY + KNTD +YKNRVRSR
Sbjct: 136 DTVRSKCREMLTSALQT---DNDYVAIGVDCEEMAAQIEEFIYQDVKNTDLKYKNRVRSR 192
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
I+NLKD KNP L +N + G I+ ++A MT+E EMA++E+K +R
Sbjct: 193 ISNLKDSKNPDLRKNVLCGVITPEQIAVMTSE-------------EMASNELKEIRKAMT 239
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I + Q+A GT+TDL CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 240 KEAIREHQMAKTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 286
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 21/181 (11%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNE 92
P +T +P + D+VR KCREML ++Q D D +A S E L++++EE I+ +
Sbjct: 123 PRITTFP--QVPITCDAVRNKCREMLTLALQT---DHDHVAVGVSCEHLSSQIEECIFLD 177
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E
Sbjct: 178 VGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE------------- 224
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE+K +R KE+I + Q+A GT+TDL C KC+K+NCTY QVQTRS+DEPMT
Sbjct: 225 EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMT 284
Query: 213 T 213
T
Sbjct: 285 T 285
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 123/206 (59%), Gaps = 26/206 (12%)
Query: 20 SSKKKEAKEEKKEDKK----------PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+S KEA E + +K P +T +PP D+VR KCREML ++Q
Sbjct: 83 TSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPV--TCDAVRTKCREMLTAALQTDH 140
Query: 70 LDMDGLASLEELATELEEAI-YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAI 128
+ A E LA ++EE I + + NTD +YKNRVRSR++NLKD KNP L R + GAI
Sbjct: 141 DHVAIGADCECLAGQIEEYILFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAI 200
Query: 129 SASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLK 188
+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+TDL
Sbjct: 201 TPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFT 247
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 248 CGKCRKKNCTYTQVQTRSSDEPMTTF 273
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 110/181 (60%), Gaps = 44/181 (24%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+VT K+H DSVR KCREML N+++ +EFKN
Sbjct: 105 PAVT-----KTH---DSVREKCREMLANALKT-----------------------DEFKN 133
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
T+ +YK RVRSRIANLKD KNP L + G +SA K+A MTAE EMA
Sbjct: 134 TEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAE-------------EMA 180
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+ EMK LR KE+I DAQ+AT GT+TDLLKCGKCKKRN TYNQVQTRSADEPMTT
Sbjct: 181 SPEMKELRQSLTKEAIRDAQMATTGGTQTDLLKCGKCKKRNVTYNQVQTRSADEPMTTFC 240
Query: 216 H 216
+
Sbjct: 241 Y 241
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 110/181 (60%), Gaps = 44/181 (24%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P+VT K+H DSVR KCREML N+++ +EFKN
Sbjct: 354 PAVT-----KTH---DSVREKCREMLANALKT-----------------------DEFKN 382
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
T+ +YK RVRSRIANLKD KNP L + G +SA K+A MTAE EMA
Sbjct: 383 TEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAE-------------EMA 429
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+ EMK LR KE+I DAQ+AT GT+TDLLKCGKCKKRN TYNQVQTRSADEPMTT
Sbjct: 430 SPEMKELRQSLTKEAIRDAQMATTGGTQTDLLKCGKCKKRNVTYNQVQTRSADEPMTTFC 489
Query: 216 H 216
+
Sbjct: 490 Y 490
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 115/178 (64%), Gaps = 17/178 (9%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNT 96
+T++PP +DSVR KCREML +Q GD G A E LA ++EE ++ E +NT
Sbjct: 118 MTRFPPLPVT--SDSVRTKCREMLIAVLQTDGDHVAIG-ADCELLAAQIEEVVFRELQNT 174
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
D +YKNR+RSRI+NLKD KNP L +N + G I+ ++A M+ E EMA+
Sbjct: 175 DMKYKNRIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSCE-------------EMAS 221
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E+K +R + K SI + Q+ GT++DL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 222 NELKEMRKEITKASIQEHQMGKTGGTQSDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 279
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 111/177 (62%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
VT +PP + TD VR KCRE+L ++Q D E LA ++EE I+ EFK+TD
Sbjct: 129 VTSFPP--APVTTDCVRSKCRELLVVALQTDDDHKAIRVDCEHLAAQIEEQIFQEFKSTD 186
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YK R+RSRI+NLKD KNP L RN + G IS ++A MTAE EMA+
Sbjct: 187 MKYKTRLRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAE-------------EMASA 233
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KESI + QL+ V GT+TD+ C KC ++CTY QVQTRSADEPMTT
Sbjct: 234 ELKQMREALTKESIREHQLSKVGGTETDMFICSKCHGKSCTYTQVQTRSADEPMTTF 290
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 19/180 (10%)
Query: 36 PSVTQYPPQKSHNLT-DSVRLKCREMLQNSIQVGDLDMDGLA-SLEELATELEEAIYNEF 93
P +T +P S +T D+VR KCREML ++Q D D + E L+ ++EE I+ +
Sbjct: 123 PRITTFP---SVPITCDAVRNKCREMLTLALQT-DHDHKAVGVDCEHLSAQIEECIFLDV 178
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E E
Sbjct: 179 GNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE-------------E 225
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE+K +R KE+I + Q+A GT+TDL C KCKK+NCTY QVQTRS+DEPMTT
Sbjct: 226 MASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDEPMTT 285
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 96/136 (70%), Gaps = 13/136 (9%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
EEL ++EEA++ EFKNTD +YKNRVRSRIANLKD KNP L RN + G I+ + A M+A
Sbjct: 83 EELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFARMSA 142
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E EMA+DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCT
Sbjct: 143 E-------------EMASDELKEMRKNLTKEAIREHQMARTGGTQTDLFSCGKCKKKNCT 189
Query: 199 YNQVQTRSADEPMTTL 214
Y QVQTRSADEPMTTL
Sbjct: 190 YTQVQTRSADEPMTTL 205
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 106/162 (65%), Gaps = 16/162 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR+KCREML ++Q GDL +G E++A +LEEAIY E K +YKNR+RSR+ANL+
Sbjct: 5 VRIKCREMLAAALQAGDLP-EGCGDPEDMAAQLEEAIYVELKCCQVKYKNRIRSRLANLR 63
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
DPKNP L ++ G I K+A MT E EMA+D++K +R KF+++SI+
Sbjct: 64 DPKNPGLREKFLLGLIGVEKMARMTPE-------------EMASDDLKQMRQKFVQDSIN 110
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQ+A QGTKTDL KC +C KRNC Q+ TR DEPM T
Sbjct: 111 KAQMAKFQGTKTDLFKCDRCHKRNCI--QLHTRDGDEPMVTF 150
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 19/180 (10%)
Query: 36 PSVTQYPPQKSHNLT-DSVRLKCREMLQNSIQVGDLDMDGLA-SLEELATELEEAIYNEF 93
P +T +P S +T D+VR KCREML ++Q D D + E L+ ++EE I+ +
Sbjct: 79 PRITTFP---SVPITCDAVRNKCREMLTLALQT-DHDHKAVGVDCEHLSAQIEECIFLDV 134
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E E
Sbjct: 135 GNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE-------------E 181
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE+K +R KE+I + Q+A GT+TDL C KCKK+NCTY QVQTRS+DEPMTT
Sbjct: 182 MASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDEPMTT 241
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 118/181 (65%), Gaps = 21/181 (11%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNE 92
P +T +P + D+VR KCREML ++Q D D +A + E L++++EE I+ +
Sbjct: 123 PRITTFP--QVPITCDAVRNKCREMLTLALQT---DHDHVAVGVNCEHLSSQIEECIFLD 177
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E
Sbjct: 178 VGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE------------- 224
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE+K +R KE+I + Q+A GT+TDL C KC+K+NCTY QVQTRS+DEPMT
Sbjct: 225 EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMT 284
Query: 213 T 213
T
Sbjct: 285 T 285
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 99/134 (73%), Gaps = 8/134 (5%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT----RS 144
IY E K TD +YKNRVRSRI+NLKDPKNP L +N + G I+ S++A+M+AEV RS
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRS 170
Query: 145 ADEP----MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
P ++T EMA+DE+K LRN +E+I + Q+A GT TDLL+CGKCKK+NCTYN
Sbjct: 171 GAPPFHVCVSTKEMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYN 230
Query: 201 QVQTRSADEPMTTL 214
QVQTRSADEPMTT
Sbjct: 231 QVQTRSADEPMTTF 244
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 112/177 (63%), Gaps = 15/177 (8%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
+T +PP + +DSVR KCRE+L ++Q D + LA ++E I+ EFK+TD
Sbjct: 135 ITSFPP--APVTSDSVRNKCRELLVAALQTDDDYKTIGVDCDHLAAQIEHQIFQEFKSTD 192
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YK R+RSRI+NLKD KNP L RN + G ISA ++A MTAE EMA+
Sbjct: 193 MKYKARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAE-------------EMASA 239
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KESI + QL+ V GT+TD+ C KC +NCTY QVQTRSADEPMTT
Sbjct: 240 ELKQIREALTKESIREHQLSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTTF 296
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 117/181 (64%), Gaps = 21/181 (11%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNE 92
P +T +P + D+VR KCREML ++Q D D +A + E L++++EE I+ +
Sbjct: 97 PRITTFP--QVPITCDAVRNKCREMLTLALQT---DHDHVAVGVNCEHLSSQIEECIFLD 151
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
N D +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E
Sbjct: 152 VGNADMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE------------- 198
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE+K +R KE+I + Q+A GT+TDL C KC+K+NCTY QVQTRS+DEPMT
Sbjct: 199 EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMT 258
Query: 213 T 213
T
Sbjct: 259 T 259
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 118/167 (70%), Gaps = 15/167 (8%)
Query: 50 TDSVRLKCREMLQNSIQVG--DLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
+++VR CR+M+ +++ G +++++ L L+ +E+ I++EFK+T+ +YKNRVRSR
Sbjct: 148 SNAVRNTCRDMVYKAMKKGLNEVNIEDDTRLYNLSAAIEDQIFSEFKDTNMKYKNRVRSR 207
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
++N+ D KNP L + I G IS +++A M+ E EMA+++MK LR ++
Sbjct: 208 VSNIGDLKNPGLKQKIISGEISPARIAKMSTE-------------EMASEDMKKLRQEYT 254
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE+I D+Q+A QGTK+DLLKCGKC KRNC+YNQ+QTRSADEPMTT
Sbjct: 255 KEAIRDSQMAVTQGTKSDLLKCGKCGKRNCSYNQMQTRSADEPMTTF 301
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 109/164 (66%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML +S+Q + + A EE+A ++EE IY + KNTD +YKNRVRS I+N
Sbjct: 42 DTVRSKCREMLTSSLQTDNDYVAIGADCEEMAAQIEEFIYQDVKNTDLKYKNRVRSHISN 101
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L +N + G I+ ++A MT+E EMA++E+K + KE+
Sbjct: 102 LKDSKNPDLRKNVLCGVITPEEIAVMTSE-------------EMASNELKEIWKAMTKEA 148
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT+TDL C KC+K+NCTY QVQTRS+DEPMTT
Sbjct: 149 IREHQMAKTGGTQTDLFTCRKCRKKNCTYTQVQTRSSDEPMTTF 192
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 122/203 (60%), Gaps = 39/203 (19%)
Query: 51 DSVRLKCREMLQNSIQVGD---LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSR 107
D VR+KCRE+L +S+ + + + + +ELA ++E++I+ EFKNTD +YK R+RSR
Sbjct: 131 DPVRIKCRELLASSLVLDEEVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYKARIRSR 190
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAE-------VQTRSA-------DEPMT--- 150
+ANLKD KNP L I G I ++A M+AE Q R+ D M+
Sbjct: 191 VANLKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQLRAKFTKESIDDHQMSRQE 250
Query: 151 -----------------TF--EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
T+ EMA+DEM+ LR KF KESIDD Q++ +GT TDL KCGK
Sbjct: 251 GTVTDLFKCGKCGKKNCTYNQEMASDEMRQLRAKFTKESIDDHQMSRQEGTVTDLFKCGK 310
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
C K+NCTYNQ+QTRS+DEPMTT
Sbjct: 311 CGKKNCTYNQLQTRSSDEPMTTF 333
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 16/162 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR+KCREML +++ GD+ G E++A +LEEAIY E K+ +YKNR+RSR+ANL+
Sbjct: 5 VRIKCREMLAAALKAGDMPA-GCDDPEDMAAQLEEAIYVELKSCQVKYKNRIRSRLANLR 63
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
DPKNP L ++ G IS +LA MT E EMA+D++K +R KF++ESI+
Sbjct: 64 DPKNPALREKFLLGLISVEQLARMTPE-------------EMASDDLKQMRQKFVQESIN 110
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQ+A QGTKTDL KC +C+KRNC Q+ TR DE M T
Sbjct: 111 AAQMAEFQGTKTDLFKCDRCQKRNCI--QLHTRDGDESMITF 150
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 122/208 (58%), Gaps = 24/208 (11%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMD 73
N++D SS K++ + K + P D+VR KCREML ++Q D +
Sbjct: 81 GNSRDQSSNKRQEPPKTPTTPKITTFPPAPVTC----DAVRNKCREMLTAALQADDDYVA 136
Query: 74 GLASLEELATELEEAIYNE-------FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
A E +A ++EE I KNTD +YKNRVRSRI+NLKD KNP L +N + G
Sbjct: 137 IGADCEHIAAQIEEYILTNGASSRAYVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCG 196
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
AI+ ++A MT+E EMA++E+K +R KE+I + Q+A GT+TDL
Sbjct: 197 AITPEQIAVMTSE-------------EMASNELKEIRKAMTKEAIREHQMAKTGGTQTDL 243
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKCKK+NCTY QVQTRS+DEPMTT
Sbjct: 244 FTCGKCKKKNCTYTQVQTRSSDEPMTTF 271
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 131/240 (54%), Gaps = 48/240 (20%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQ----YPPQKSHNLTDSVRLKCREMLQN 63
P PP + DSS ++ +A K S T PP S +SVR KC EML
Sbjct: 187 PGPPQRKPSTDSSERRPKADTPKTPTTPTSPTSPGGLLPPHLSTG--ESVRDKCIEMLAA 244
Query: 64 SIQVGDLDMDGLASLEELATELEEAI-----------------------------YNEFK 94
+++ + + + + +A E+E+ I Y E K
Sbjct: 245 ALRTDNDYKEFGTNCDSMAAEIEDHILLPAVSRYQPSASTLTSGLDLLDSTLAHIYQEIK 304
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
TD +YKNRVRSRI+NLKDPKNP L +N + G I+ S++A+M+AE EM
Sbjct: 305 ATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAE-------------EM 351
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A+DE+K LRN +E+I + Q+A GT TDLL+CGKCKK+NCTYNQVQTRSADEPMTT
Sbjct: 352 ASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTF 411
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 22/181 (12%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNE 92
P +T +P + D+VR KCREML ++Q D D +A + E L++++E+ I+ +
Sbjct: 123 PRITTFP--QVPITCDAVRNKCREMLTLALQT---DHDHVAVGVNCEHLSSQIED-IFLD 176
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E
Sbjct: 177 VGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSE------------- 223
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE+K +R KE+I + Q+A GT+TDL C KC+K+NCTY QVQTRS+DEPMT
Sbjct: 224 EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMT 283
Query: 213 T 213
T
Sbjct: 284 T 284
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 107/164 (65%), Gaps = 15/164 (9%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD
Sbjct: 106 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTD 163
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+D
Sbjct: 164 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASD 210
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY Q
Sbjct: 211 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQ 254
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 117/180 (65%), Gaps = 21/180 (11%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASL--EELATELEEAIYNEFKNT 96
T +PPQ +TD VR KCR+ML S++ DL+ ++ L E LA E+E+ IY+ F NT
Sbjct: 176 TTFPPQ----MTD-VREKCRQMLLKSLE-PDLNSPEISVLTRERLAAEIEQEIYSLFNNT 229
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
+RY VRSR+ NL+D KNP L R+ + G I+A +LATMT+E EMA+
Sbjct: 230 GDRYCACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSE-------------EMAS 276
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHH 216
+ +K R KF KE+I++ Q+A GT TD+ KCGKC K+NCTY Q QTRSADEPMTT +
Sbjct: 277 EALKAARRKFTKEAIEEHQVAQEVGTPTDMFKCGKCHKKNCTYTQAQTRSADEPMTTFVY 336
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 110/180 (61%), Gaps = 17/180 (9%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL-ASLEELATELEEAIYNEFK 94
P +T + P D++R KC EML ++Q DLD L A E L+ ++EE+I+ +
Sbjct: 122 PRITAFLP--GSVTCDAIRSKCCEMLTAALQ-KDLDYVALGADCESLSAQIEESIFRDIG 178
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
NTD +YKNRVRSRI NL+D KNP L R + G I+ ++A MTAE EM
Sbjct: 179 NTDGKYKNRVRSRIFNLRDAKNPDLRRKVLRGVITPQQIAVMTAE-------------EM 225
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A+DEMK +R +E+I Q A GT+TDL+ CGKC ++CTY Q QTRS+DEPMTT
Sbjct: 226 ASDEMKEIRKAMTREAIRKHQKARTGGTQTDLITCGKCSGKSCTYTQAQTRSSDEPMTTF 285
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ I+ E K+TD +Y+NRVRSRI+N
Sbjct: 187 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIHQELKSTDMKYRNRVRSRISN 246
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAIS +A MTAE EMA+DE++ LRN +E+
Sbjct: 247 LKDPRNPGLRRNVLSGAISTGLIAKMTAE-------------EMASDELRELRNAMTQEA 293
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 294 IREHQMAKTGGTTTDLFQCKKCKKKNCTYNQVQTRSADEPMTTF 337
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 106/177 (59%), Gaps = 38/177 (21%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ +P ++ + +DSVRLKCREML +++ G E +NTD
Sbjct: 212 VSSFP--RAPSTSDSVRLKCREMLAAALRTG-----------------------EIRNTD 246
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YKNRVRSRI+NLKD KNP L +N + G IS A MTAE EMA+D
Sbjct: 247 MKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAE-------------EMASD 293
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 294 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 350
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 88/112 (78%), Gaps = 13/112 (11%)
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
+VRSR+ANL+D KNP L N++ GAI+ ++LA MTAE EMA+DE+K L
Sbjct: 2 QVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAE-------------EMASDEIKQL 48
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
R +F KE+I+DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT
Sbjct: 49 REQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTF 100
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 105/164 (64%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
+SVR KCREML +Q + LA +EEAIY+EFK+T +YKNR+RSR +N
Sbjct: 135 NSVRDKCREMLVRGLQTDNTSGHSDQQCAFLAAAIEEAIYSEFKDTGVKYKNRIRSRFSN 194
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD +N +L N + G + ++A MTAE EMA+DEMK R ++ +++
Sbjct: 195 LKDTRNSILRLNVLNGILKPEQIAKMTAE-------------EMASDEMKKKREEYEQQN 241
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I D Q++ +GTKTD+ CG+CK R CTYNQ+QTRSADEPMTT
Sbjct: 242 IKDHQMSVNEGTKTDMFVCGRCKGRACTYNQLQTRSADEPMTTF 285
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 113/164 (68%), Gaps = 13/164 (7%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML ++++ D + + +++A+E+E+ I +E K TD +Y+NRVRSRI+N
Sbjct: 190 DSVRDKCVEMLSAALKMDDDYKEYGVNCDKMASEIEDHILSELKGTDMKYRNRVRSRISN 249
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAIS S +A MTAE EMA+DE+K LRN E+
Sbjct: 250 LKDPRNPNLRRNVLCGAISTSLIARMTAE-------------EMASDELKELRNAMTLEA 296
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 297 IREHQMAKTGGTTTDLFQCXKCKKKNCTYNQVQTRSADEPMTTF 340
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 116/199 (58%), Gaps = 22/199 (11%)
Query: 8 PAPPGISNN----KDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQN 63
P PP S KD S K+ E + P +T +PP + D+VR KCREML
Sbjct: 69 PLPPSSSKEPPEAKDPSRKRPELP---RMPSAPRITTFPP--APVTCDAVRNKCREMLAA 123
Query: 64 SIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNY 123
+++ M A E L+ ++EE I+ + NTD +YKNRVRSRI+NLKD KNP L RN
Sbjct: 124 ALRTDHDHMAVGADCEGLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNV 183
Query: 124 IFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK 183
+ GAI+ ++A MT+E EMA+DE+K +R KE+I + Q+A GT+
Sbjct: 184 LCGAITPQQIAVMTSE-------------EMASDELKEIRKAMTKEAIREHQMARTGGTQ 230
Query: 184 TDLLKCGKCKKRNCTYNQV 202
TDL CGKC+++NCTY QV
Sbjct: 231 TDLFTCGKCRRKNCTYTQV 249
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 97/154 (62%), Gaps = 23/154 (14%)
Query: 61 LQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLS 120
L + +G L DGL +AI+ E K + +YKNRVRSRI+NLKD KNP L
Sbjct: 147 LSRKLLIGALSRDGL----------NKAIFKELKGPNMKYKNRVRSRISNLKDSKNPNLC 196
Query: 121 RNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ 180
+ + G I+ ++A MTAE EMA+DEMK LR + KE I DAQ+A Q
Sbjct: 197 QKVLSGIITPEQIAKMTAE-------------EMASDEMKKLRQGYAKEGIRDAQMAVTQ 243
Query: 181 GTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
GTKTDLL CGKC K+NC+YNQ+QTRSADEPMTT
Sbjct: 244 GTKTDLLTCGKCHKKNCSYNQMQTRSADEPMTTF 277
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 128/222 (57%), Gaps = 35/222 (15%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKP----------------SVTQYPPQKSHNLTDS 52
APP + K+S +EAK EKK+ + P + +PP+ N D
Sbjct: 93 APPAKKHRKESV---EEAKPEKKKIEAPYKRPEPSSRPEIVAQFASASFPPKHLEN--DE 147
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
RLK ++L ++++ GD+ G EELA ++EE +Y+ ++T+ Y VRSRI NL+
Sbjct: 148 TRLKSAQLLLSALRFGDMP-QGTLDPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLR 206
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
D KN L N + G + A K ATMT+E EMA+ E++ +R+KF KE+I
Sbjct: 207 DKKNLALRENVLTGVVRAEKFATMTSE-------------EMASAEIREMRDKFTKEAIL 253
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q++ QGT +D+ KCGKC K+NCTY Q+QTRS+DEPMTT
Sbjct: 254 EHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTF 295
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 112/174 (64%), Gaps = 15/174 (8%)
Query: 42 PPQKSHN-LTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
PP + L D +R KC +ML +++Q +L DG EELA ++E+ ++ + T ++Y
Sbjct: 129 PPAPTRQFLNDEMRNKCIQMLLSALQSKELP-DGTHDPEELAIKIEKKLFEVHRGTGDKY 187
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
++ VRSR+ NL+D KN L N + G ++ +K A MT+E EMA+DEM+
Sbjct: 188 RSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVMTSE-------------EMASDEMR 234
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ R KF K++I++ Q++ +GT +D+ KCGKC K+NCTY QVQTRSADEPMTT
Sbjct: 235 SQREKFTKQAIEEHQMSVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTF 288
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 111/203 (54%), Gaps = 52/203 (25%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY-------------------- 90
DSVR KC EML +++ D D + +++A+E+E+ I
Sbjct: 73 DSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHILEPLETSSSPASLSRPANVER 132
Query: 91 -------------------NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
E +TD +Y+NRVRSRI+NLKDP+NP L R + GAI+A
Sbjct: 133 SLRPDTAQCARSLAQRRYSRELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAG 192
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+A MTAE EMA+DE++ LRN +E+I + Q+A GT TDL +C K
Sbjct: 193 LIAKMTAE-------------EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSK 239
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
CKK+NCTYNQVQTRSADEPMTT
Sbjct: 240 CKKKNCTYNQVQTRSADEPMTTF 262
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 16/174 (9%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
+PP+ N D RLK ++L ++++ G+L DG EELA ++EE +Y+ ++T+ Y
Sbjct: 135 FPPKHLEN--DETRLKSAQLLLSALRYGELP-DGTLDPEELAVQIEEKLYSVHRDTNKNY 191
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
VRSRI NL+D KN L N + G + A K ATMT+E EMA+ E++
Sbjct: 192 SAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSE-------------EMASPEIR 238
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+R KF KE+I + Q++ QGT +D+ KCGKC K+NCTY Q+QTRS+DEPMTT
Sbjct: 239 EMREKFTKEAILEHQVSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTF 292
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 18/208 (8%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVG 68
P +SSS+K+E ++EK D K + + D VR K RE+LQ ++ V
Sbjct: 91 GAPAKVQKTESSSQKREKEKEKTSDSKDDFSLGASIQP--TADPVRNKSRELLQKALLV- 147
Query: 69 DLDMDGLASLEELATELEEAIYNEFKNT--DNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
D D + +A ++EEAIYN N+ D +Y+N++RSR +NLKD KNP L + + G
Sbjct: 148 DKDKFSPQFVSLMAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTG 207
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
IS KLA+M E EMA+ +++ LR KF KE+I+D Q+A +GT+TD+
Sbjct: 208 VISPDKLASMKPE-------------EMASKQLQELRKKFTKEAINDHQMAQNEGTQTDM 254
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKCK + CTY Q+QTRSADEPMTT
Sbjct: 255 FSCGKCKSKKCTYTQLQTRSADEPMTTF 282
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 18/208 (8%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVG 68
P +SSS+K+E ++EK D K + + D VR K RE+LQ ++ V
Sbjct: 91 GAPAKVQKTESSSQKREKEKEKTSDSKDDFSLGASIQP--TADPVRNKSRELLQKALLV- 147
Query: 69 DLDMDGLASLEELATELEEAIYNEFKNT--DNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
D D + +A ++EEAIYN N+ D +Y+N++RSR +NLKD KNP L + + G
Sbjct: 148 DKDKFNPQFVSLMAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTG 207
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
IS KLA+M E EMA+ +++ LR KF KE+I+D Q+A +GT+TD+
Sbjct: 208 VISPDKLASMKPE-------------EMASKQLQELRKKFTKEAINDHQMAQNEGTQTDM 254
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKCK + CTY Q+QTRSADEPMTT
Sbjct: 255 FSCGKCKSKKCTYTQLQTRSADEPMTTF 282
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 88/123 (71%), Gaps = 13/123 (10%)
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
EF NT+ +YK RVRSR+ANLKD +NP+L + + G+I K+A MTAE
Sbjct: 16 EFTNTEAKYKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAE------------ 63
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
EMA+D +K LR + KE+I +AQ++T GTKT LLKCGKCKKRNCTYNQVQTRSADEPM
Sbjct: 64 -EMASDRLKELRRELTKEAIREAQMSTTGGTKTSLLKCGKCKKRNCTYNQVQTRSADEPM 122
Query: 212 TTL 214
TT
Sbjct: 123 TTF 125
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 106/178 (59%), Gaps = 14/178 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
S T P + L D VR KC M+ +++ +L DG EELA E ++ + T
Sbjct: 65 SSTPTPTARKQLLPDEVRNKCATMILDALLSKELP-DGTLDPEELAVRTERKLFEVHRGT 123
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
+Y+ +RSR+ NL+D KN +L N + GA++ K A MTA+ EMA+
Sbjct: 124 SEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVMTAD-------------EMAS 170
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DEMK R KF K++I++ Q+A +GT +D+ KCGKC K+NCTY QVQTRSADEPMTT
Sbjct: 171 DEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTF 228
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 106/178 (59%), Gaps = 14/178 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
S T P + L D VR KC M+ +++ +L DG EELA E ++ + T
Sbjct: 134 SSTPTPTARKQLLPDEVRNKCATMILDALLSKELP-DGTLDPEELAVRTERKLFEVHRGT 192
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
+Y+ +RSR+ NL+D KN +L N + GA++ K A MTA+ EMA+
Sbjct: 193 SEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVMTAD-------------EMAS 239
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DEMK R KF K++I++ Q+A +GT +D+ KCGKC K+NCTY QVQTRSADEPMTT
Sbjct: 240 DEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTF 297
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 16/174 (9%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
+PP+ N D RLK ++L ++++ G++ G EELA ++EE +Y+ ++T+ Y
Sbjct: 138 FPPKHLEN--DETRLKSAQLLLSALRFGEMP-QGTLDPEELAVQIEEKLYSVHRDTNKNY 194
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
VRSRI NL+D KN L N + G + A K ATMT+E EMA+ E++
Sbjct: 195 SAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSE-------------EMASPEIR 241
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+R+KF KE+I + Q++ QGT +D+ KCGKC K+NCTY Q+QTRS+DEPMTT
Sbjct: 242 NMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTF 295
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 16/162 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
+R+KCREML +++ G++ G +++A +LE+AIY + +YKNR+RSR+ANL+
Sbjct: 5 IRIKCREMLATALKSGNMP-PGCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLR 63
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
DPKNP L + ++ G I+ +L+ MT E EMA+D+MK +R K++++SI+
Sbjct: 64 DPKNPELRQKFLLGQITPEELSKMTPE-------------EMASDDMKQMRQKYVQDSIN 110
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQ+A VQGTKTD KC +C KRNC+ Q+ R DEP+ T
Sbjct: 111 AAQMAKVQGTKTDQFKCERCDKRNCS--QLHIRDGDEPIITF 150
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 91/146 (62%), Gaps = 33/146 (22%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY E K+TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE
Sbjct: 305 IYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGLIAKMTAE--------- 355
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV------ 202
EMA+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQV
Sbjct: 356 ----EMASDELRKLRNAMTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQVSLLASD 411
Query: 203 --------------QTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 412 KTVSHCVLLADCWMQTRSADEPMTTF 437
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 13/123 (10%)
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
E K TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE
Sbjct: 89 ELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE------------ 136
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
EMA+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPM
Sbjct: 137 -EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPM 195
Query: 212 TTL 214
TT
Sbjct: 196 TTF 198
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 16/174 (9%)
Query: 41 YPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
+PP+ N D RLK ++L ++++ G++ G EELA ++EE +++ + T+ Y
Sbjct: 139 FPPKHLEN--DETRLKSAQLLLSALRSGEMP-QGTLDPEELAVQIEEKLHSVHRGTNKNY 195
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
VRSRI NL+D KN L N + G + A K ATMT+E EMA+ E++
Sbjct: 196 SAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSE-------------EMASPEIR 242
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+R+KF KE+I + Q++ QGT +D+ KCGKC K+NCTY Q+QTRS+DEPMTT
Sbjct: 243 NMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTF 296
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 16/162 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR+KCREML +++ G + G + A +LE+AIY E + +YKNR+RSR+ANL+
Sbjct: 5 VRMKCREMLAAALKSGPMP-PGCGDPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLR 63
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
DPKNP L ++ G I+ +L+ MT E EMA+D++K +R +++++SI+
Sbjct: 64 DPKNPGLREKFLVGLITPQELSRMTPE-------------EMASDDLKQMRQQYVQDSIN 110
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQL V+GTKT+L KC +C+KRNCT Q+ R DEP+ T
Sbjct: 111 AAQLGNVEGTKTNLFKCERCQKRNCT--QLHIRDGDEPLITF 150
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 102/166 (61%), Gaps = 14/166 (8%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRI 108
L D VR KC M+ +++ +L DG EELA E ++ + T +Y+ +RSR+
Sbjct: 141 LPDEVRNKCATMILDALLSKELP-DGTLDPEELAIRTERKLFEVHRGTSEKYRAALRSRV 199
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NL+D KN +L N + GA++ K A MTA+ EMA+DEMK R KF K
Sbjct: 200 FNLRDKKNLVLRENVLIGAVTPEKFAVMTAD-------------EMASDEMKAQREKFTK 246
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++I++ Q+A +GT +D+ KCGKC K+NCTY QVQTRSADEPMTT
Sbjct: 247 QAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTF 292
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/116 (58%), Positives = 83/116 (71%), Gaps = 13/116 (11%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EMA+DE
Sbjct: 2 KYRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAE-------------EMASDE 48
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 49 LRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 104
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 103/170 (60%), Gaps = 29/170 (17%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY----------------NEFK 94
DSVR KC EML +++ D D + +++A+E+E+ I E K
Sbjct: 166 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHILELCQGCGCLDRLAAPLQELK 225
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+TD +Y+NRVRSRI+NLKDP+NP L RN + GAISA +A MTAE EM
Sbjct: 226 STDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EM 272
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
A+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQV T
Sbjct: 273 ASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVWT 322
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 13/158 (8%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCRE+L ++Q G + + LA ++EE IY EFK+T+ +YK+R+RSRI+N
Sbjct: 138 DNVRNKCRELLVAALQTGGDHLTMGVDCQHLAAQIEEEIYQEFKSTETKYKSRLRSRISN 197
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD KNP L RN + G IS ++A+M+AE EMA+ E+K +R KES
Sbjct: 198 LKDQKNPELRRNVLCGNISPQRIASMSAE-------------EMASAELKQIREALTKES 244
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
I + QL+ V GT+TD+ C C ++C+Y QV+TR+++
Sbjct: 245 IREHQLSKVGGTETDMFICNNCHGKSCSYTQVETRASE 282
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 87/121 (71%), Gaps = 13/121 (10%)
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
K TD +Y+NR+RSRI+NLKDPKNP L +N + G ++ +ATMTAE E
Sbjct: 1 KVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE-------------E 47
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE++ LRN +E+I + Q+A GT+TDLL+C KCKK+NC+YNQVQTRSADEPMTT
Sbjct: 48 MASDELRELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTT 107
Query: 214 L 214
Sbjct: 108 F 108
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 111/196 (56%), Gaps = 13/196 (6%)
Query: 19 SSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASL 78
+S K K KK KPS T + + + +DSVR+K REML +++ GD ++
Sbjct: 46 TSLAKSLVKSWKKLPDKPSNTCFICSLARSTSDSVRMKYREMLPAALRTGDDCIEMGTDE 105
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
EEL + EEAI E NT +YKNRV+S+I+NL D KNP L +N G I LA MTA
Sbjct: 106 EELGSRTEEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTA 165
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E EMA+DE+K + KE+I + Q+A GT+ D L C KCKK+NCT
Sbjct: 166 E-------------EMASDELKEMHKNLRKEAIREHQMAKTGGTQPDSLTCAKCKKKNCT 212
Query: 199 YNQVQTRSADEPMTTL 214
QVQ SA EPMTT
Sbjct: 213 STQVQACSAGEPMTTF 228
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 85/126 (67%), Gaps = 13/126 (10%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
I+ + NTD +YKNRVRSRIANLKD KNP L RN + G I+ ++A MT+E
Sbjct: 5 IFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSE--------- 55
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DE+K +R KE+I + Q+A GT+TDL C KC+K+NCTY QVQTRS+D
Sbjct: 56 ----EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSD 111
Query: 209 EPMTTL 214
EPMTT
Sbjct: 112 EPMTTF 117
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 93/150 (62%), Gaps = 14/150 (9%)
Query: 66 QVGDLDMDGLA-SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYI 124
Q D ++ LA SL + +L IY E +NTD +YKNRVRSRI+ KD KNP L +N +
Sbjct: 129 QSTDEEVTSLAKSLIKSWKKLLVPIYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVL 188
Query: 125 FGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
G I A MTAE EMA+DE+K +R KE+I + Q+A GT+T
Sbjct: 189 CGNIPPDLFARMTAE-------------EMASDELKEMRKNLTKEAIREHQMAKTGGTQT 235
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 236 DLFTCGKCKKKNCTYTQVQTRSADEPMTTF 265
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 89/142 (62%), Gaps = 13/142 (9%)
Query: 73 DGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
DG EELA E ++ + T +Y+ +RSR+ NL+D KN +L N + GA++ K
Sbjct: 13 DGTLDPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEK 72
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
A MTA+ EMA+DEMK R KF K++I++ Q+A +GT +D+ KCGKC
Sbjct: 73 FAVMTAD-------------EMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKC 119
Query: 193 KKRNCTYNQVQTRSADEPMTTL 214
K+NCTY QVQTRSADEPMTT
Sbjct: 120 GKKNCTYTQVQTRSADEPMTTF 141
>gi|156564607|gb|ABU80627.1| transcription elongation factor TFIIS [Artemia franciscana]
Length = 108
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 80/110 (72%), Gaps = 15/110 (13%)
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RSRI NLK N ML N + GA+SASKL+ MT E EMA+ EMK LR+
Sbjct: 1 RSRIMNLKS--NNMLRLNVLTGAVSASKLSKMTPE-------------EMASVEMKALRD 45
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KF+KE I+D+QLA V+GT+TDLLKCGKC KRNCTYNQ+QTRSADEPMTT
Sbjct: 46 KFVKEGIEDSQLAVVEGTQTDLLKCGKCHKRNCTYNQLQTRSADEPMTTF 95
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%), Gaps = 13/143 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 26 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 85
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKDP+NP L RN + GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 86 LKDPRNPGLRRNVLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 132
Query: 171 IDDAQLATVQGTKTDLLKCGKCK 193
I + Q+A GT TDL +C KCK
Sbjct: 133 IREHQMAKTGGTTTDLFQCSKCK 155
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 83/126 (65%), Gaps = 13/126 (10%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY E K+TD +Y+NRVRSRI+NLKDP+NP L RN + GAIS +A MTAE
Sbjct: 11 IYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAE--------- 61
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DE++ LRN +E+I + Q+A GT TDLL+C KCKK+NCTYNQV
Sbjct: 62 ----EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVGKVLLT 117
Query: 209 EPMTTL 214
EP T L
Sbjct: 118 EPPTRL 123
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 13/116 (11%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YKNRVRSRI+NLKD KNP L R + G+I+ ++A MT+E EMA+DE
Sbjct: 2 KYKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSE-------------EMASDE 48
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+K +R KE+I + Q+A GT+TDL CGKC+K+NCTY QVQTRS+DEPMTT
Sbjct: 49 LKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTF 104
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 18/166 (10%)
Query: 52 SVRLKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
+VR +C++M+ +S++ + D D +A +E I+ FK+T+ +Y+N+++S++ N
Sbjct: 128 AVRSQCQQMIASSLKSENNPDYDPT----NIAAAIENEIFMCFKDTNIKYRNKIKSKVMN 183
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
L+D +NP L + I G I+ + A MTAE EMA+DEMK R K +E+
Sbjct: 184 LRDKRNPELCQLVIEGVITPERFAKMTAE-------------EMASDEMKKERKKITEEA 230
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHH 216
I + QLAT GT T KCGKC KRN TYNQVQTRSADEPMTT +
Sbjct: 231 IKEHQLATTAGTATGQFKCGKCGKRNTTYNQVQTRSADEPMTTFVY 276
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 101/204 (49%), Gaps = 68/204 (33%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
P +T +PP D+VR KCREML ++Q +
Sbjct: 123 PRITTFPPVPI--TCDAVRNKCREMLTTALQTDHM------------------------- 155
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
+YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E EMA
Sbjct: 156 ---KYKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSE-------------EMA 199
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ-------------- 201
+DE+K +R KE+I + Q+A GT+TDL CGKC+K+NCTY Q
Sbjct: 200 SDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQASGPWSISSGCPHL 259
Query: 202 -----------VQTRSADEPMTTL 214
VQTRS+DEPMTT
Sbjct: 260 CLARSHPYTCKVQTRSSDEPMTTF 283
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 82/126 (65%), Gaps = 13/126 (10%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
IY EFK+T+ +YK R+RSRI+NLKD KNP L RN + G IS ++A+M+AE
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAE--------- 51
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+ E+K +R KESI + QL+ V G +TD+ C C +NCTY QVQ RSAD
Sbjct: 52 ----EMASAELKQIREALTKESIREHQLSKVGGAETDMFICNNCHGKNCTYTQVQIRSAD 107
Query: 209 EPMTTL 214
EPMTT
Sbjct: 108 EPMTTF 113
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 13/129 (10%)
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
G E LA +E AIY+ F NTD++YK RVR+R+ NL+D NP L N + G ++ KL
Sbjct: 4 GAYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKL 63
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A+MT+E EMA+ EMK LR K+ KE+I+D Q+A GT+TDLLKCGKCK
Sbjct: 64 ASMTSE-------------EMASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCK 110
Query: 194 KRNCTYNQV 202
+ CTYNQ+
Sbjct: 111 QNKCTYNQL 119
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 77/116 (66%), Gaps = 13/116 (11%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YKNRVRSRI+NLKD KNP L +N + G I A MTAE EMA+DE
Sbjct: 2 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDE 48
Query: 159 MKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 49 LKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 104
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 15/141 (10%)
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
G + A +LE+AIY E + +YKNR+RSR+ANL+DPKNP L ++ G I+ +L
Sbjct: 4 GCGDPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQEL 63
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
+ MT E EMA+D++K +R +++++SI+ AQL V+GTKT+ KC +C+
Sbjct: 64 SRMTPE-------------EMASDDLKQMRQQYVQDSINAAQLGNVEGTKTNQFKCERCQ 110
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
KRNCT Q+ R DEP+ T
Sbjct: 111 KRNCT--QLHIRDGDEPIITF 129
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 94/155 (60%), Gaps = 9/155 (5%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ----KSHNLT-DSVRLKCREMLQ 62
P P + + S SK E K PS + P S LT DSVR KC EML
Sbjct: 141 PKRPSLERSNSSRSKV----ETPKTPSSPSTPTFAPAVCLLASCYLTGDSVRDKCVEMLS 196
Query: 63 NSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRN 122
+++ D D + ++LA+E+E IY E K+TD +Y+NRVRSRI+NLKDP+NP L RN
Sbjct: 197 AALKAEDDFKDYGVNCDKLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRN 256
Query: 123 YIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+ G IS +A MTAEVQTRSADEPMTTF + N+
Sbjct: 257 VLSGTISPELIAKMTAEVQTRSADEPMTTFVLCNE 291
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 93/160 (58%), Gaps = 13/160 (8%)
Query: 55 LKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDP 114
+K REML +++ GD ++ EEL + EEAI E NT +YKNRV+S+I+NL D
Sbjct: 1 MKYREMLPAALRTGDDCIEMGTDEEELGSRTEEAIDPERGNTGMKYKNRVQSKISNLTDA 60
Query: 115 KNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDA 174
KNP L +N G I LA MTAE EMA+DE+K + KE+I +
Sbjct: 61 KNPDLRKNAPCGNIPPDLLARMTAE-------------EMASDELKEMHKNLRKEAIREH 107
Query: 175 QLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
Q+A GT+ D L C KCKK+NCT QVQ SA EPMTT
Sbjct: 108 QMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMTTF 147
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 78/131 (59%), Gaps = 13/131 (9%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
I+ EFKNT +YKNRVRSR ANLKDP+NP L R I G I+ ++ATM+A+
Sbjct: 1 IFCEFKNTGIKYKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQ--------- 51
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DE+K R + +ESI Q+ GT TD+ KC C + NC YNQ + SAD
Sbjct: 52 ----EMASDEVKKFRRQVSEESIQRRQVPHADGTMTDMFKCENCGRENCCYNQYRGFSAD 107
Query: 209 EPMTTLHHFYI 219
P+ + F +
Sbjct: 108 GPIASPFVFCM 118
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 90/164 (54%), Gaps = 33/164 (20%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ I + + + +
Sbjct: 186 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHILELWGYSLGQVGH-------- 237
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
+ GAISA +A MTAE EMA+DE++ LRN +E+
Sbjct: 238 ------------VLSGAISAGLIAKMTAE-------------EMASDELRELRNAMTQEA 272
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 273 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 316
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 100/192 (52%), Gaps = 28/192 (14%)
Query: 33 DKKPSVTQYPP---QKSHNLT----DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---A 82
+K P+ T P KS +T D VR KC E+L ++ L D A +E + A
Sbjct: 112 NKAPTPTSAGPLRTAKSDGVTGRTGDKVRDKCVELLYDA-----LASDSTAPIEMVLKRA 166
Query: 83 TELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
+E+EEA++N + Y+ ++RS NLKD NP L + + G I AS+ A MT+E
Sbjct: 167 SEVEEAVFNLKGGANQEYRGKIRSLYVNLKDKNNPTLKEDIVSGEIPASRFAVMTSE--- 223
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
EMA++E K K +E++ + A +TD +C KCK+R C Y Q
Sbjct: 224 ----------EMASEEQKAALKKIHEENLFKSLAAQEADAETDAFQCSKCKQRKCRYRQA 273
Query: 203 QTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 274 QTRSADEPMTTF 285
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 16/165 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY-NEFKNTDNRYKNRVRSRIA 109
D VR K M+ + + +G L + +LA + E +Y N TD Y+N++RS
Sbjct: 154 DEVRTKSLAMIYDGLVIGALATP--DDVFKLAKDTEHNLYRNHGSKTDTAYRNKLRSLFF 211
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKDPKNP L N I G I +LA M++E EMA+ E K K +E
Sbjct: 212 NLKDPKNPSLRNNVISGRIEPMRLALMSSE-------------EMASAERKREDEKIEQE 258
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++ +A +A + TD L+CGKC KRN +Y+Q QTRSADEPMTT
Sbjct: 259 NMKEAMVAKAPTSVTDQLRCGKCGKRNVSYSQAQTRSADEPMTTF 303
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 31/172 (18%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLAS--------LEELATELEEAIYNEFKNTDNRYKN 102
D+ R KC E++ DGLAS + A +E A++N+F +T YK+
Sbjct: 133 DNTRDKCSELM----------YDGLASDSGAPSDQIASKAAAVETAVFNQFGSTSAEYKS 182
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
++RS NLKD NP L + G +S SK ATM++ EMA++E +
Sbjct: 183 KIRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSS-------------EMASEERRAA 229
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +E+ + A Q +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 230 DKRLQEENFFKSLAAAEQEAETDGFQCGRCKQRKCRYRQAQTRSADEPMTTF 281
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLE---ELATELEEAIYNEFKNTDNRYKNRVRSR 107
D R KC E+L ++ L D A E + A E+A+++ F T YK ++RS
Sbjct: 138 DKTRDKCIELLYDA-----LAFDSGAPSELIFQRAKAAEDAVFHTFNGTTGDYKTKIRSL 192
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+ NLKD KNP L + + G + A+KLA MT++ +MA++E K K
Sbjct: 193 VVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQ-------------DMASEERKNADKKIK 239
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ A A Q +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 240 EENMFKALGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTF 286
>gi|157824026|ref|NP_001102485.1| transcription elongation factor A N-terminal and central
domain-containing protein [Rattus norvegicus]
gi|149035889|gb|EDL90556.1| rCG49713 [Rattus norvegicus]
Length = 358
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 103/211 (48%), Gaps = 34/211 (16%)
Query: 18 DSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTD----SVRLKCREMLQNSIQVGDLDMD 73
+SS+ + E E ED S P KS + D SVR KC E+L ++ D
Sbjct: 147 ESSAAQMEINEGYLEDDSES-----PSKSSGVLDNPLVSVRSKCIELLYKALASSCTDHT 201
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
+ + LA ++EE I+ N +YKN +RS++ANL +P+N L +N + G ISA +
Sbjct: 202 KVHFWQNLARQIEEHIFTLHSNDIKKYKNNIRSKVANLNNPRNSHLQQNLLSGTISAREF 261
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKC 192
A MT +MAN E+K LR +I+ SI + L V GT T+ +KC +C
Sbjct: 262 A-------------EMTVLDMANQELKQLRASYIESSIQEHHLPQIVDGTHTNKIKCRRC 308
Query: 193 KKRNCTY-----------NQVQTRSADEPMT 212
K NCT + VQ + DE MT
Sbjct: 309 DKYNCTVTVIARGTLFLPSWVQNSNPDEQMT 339
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 26/178 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDG--LASLE-----ELATELEEAIYNEFKNTDNRYKNR 103
D+ R K RE+L + Q + +G LA ++A E+E A++++ ++T K +
Sbjct: 133 DATRDKMREVLLEAFQKVPQEAEGQELARANAKDPVQVAVEVENALFSKLESTKVDKKAK 192
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NLKDP NP L R + G IS S+L TM+AE +MA+D+ K
Sbjct: 193 YRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAE-------------DMASDQRKA-E 238
Query: 164 NKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
NK IK+ ++ + + Q TD KCGKC +R CTY Q QTRSADEPMTT Y+T
Sbjct: 239 NKQIKDKALFECERGMKQEATTDQFKCGKCGRRECTYFQKQTRSADEPMTT----YVT 292
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 35/222 (15%)
Query: 13 ISNNKDSSSKKKEAKEEKKEDKKP---------SVTQYPPQKSHN-----------LTDS 52
++ K +SKK E K+E KE+ +P + T Y P +D
Sbjct: 76 VTAQKRDASKKVEGKKETKEESRPVKSSSASSGNATSYTPPSGQRTPAKDGVSTEIYSDK 135
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR +C ++ ++ VG + A +E +Y T Y+ ++RS NLK
Sbjct: 136 VRNRCIDVTYTALAVGMTAHPN--EVLACAKAIENEVYKMENGTGGNYRPKMRSLYINLK 193
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
DPKNP L N I G ISA +L M+ + EMA+DE+K + K+++
Sbjct: 194 DPKNPGLRGNVISGKISAERLCRMSPQ-------------EMASDELKKEIEEMEKQNLF 240
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A+ AT Q TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 241 AARGATEQRAVTDRFTCGKCKQKKVSYYQMQTRSADEPLTTF 282
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 13/114 (11%)
Query: 45 KSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
++ + +DSVRLKCREML +++ GD + A EEL +++EEAIY E +NTD +YKNRV
Sbjct: 8 RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKYKNRV 67
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
RSRI+NLKD KNP L +N + G I A MTAE EMA+DE
Sbjct: 68 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE-------------EMASDE 108
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 48 NLT-DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNR 103
N+T D +R KC E++ ++ L D A E++ A +E + EF T Y+++
Sbjct: 145 NITGDKIRDKCVELIYDA-----LASDSGAPSEQIMSRAKSIESTVLAEFSGTTGEYRSK 199
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
+R+ NLKD NP L + I G + K M+++ EMA++E K
Sbjct: 200 IRTFFVNLKDKNNPGLRESVISGELPVQKFCRMSSQ-------------EMASEERKAAD 246
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
N+ I+E++ A A +TD +CG+CK+R C Y Q QTRSADEPMTT + +
Sbjct: 247 NRIIQENLFKALGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTYVFS 303
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 16/169 (9%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLEELA---TELEEAIYNEFKNTDNRYKNRVR 105
L D +R + RE+L +I D AS+E++A +E A++ ++ +T YK + R
Sbjct: 157 LGDPLRDRTRELLAEAIAQAIGAPDVYASVEDVAQTAIAIENAMHAQWSDTGKEYKAKFR 216
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNK 165
NLKDPKNP L R+ G IS + L ++ E E+ +DE + K
Sbjct: 217 QLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPE-------------ELGSDERRNSNAK 263
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ + ++A + TD KCGKCK+R CTY Q+QTRSADEPMTT
Sbjct: 264 IREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTF 312
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
LKDP+NP L RN + GAISA +A MTAEV+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAEVRA 276
>gi|395821365|ref|XP_003784013.1| PREDICTED: transcription elongation factor A protein 3 [Otolemur
garnettii]
Length = 326
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 40/181 (22%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PS+ P + DSVR KC EML +++ D D + +++A+E+E+ I
Sbjct: 171 PSICLLAP--CYLTGDSVRDKCVEMLSAALKAEDDYKDYGVNCDKMASEIEDHILE---- 224
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS--ASKLATMTAEVQTRSADEPMTTFE 153
LSR I+G + A+ L T+ + ++ E
Sbjct: 225 -----------------------LSR-AIYGCLDHLAAGLPTLKGRL--------LSLQE 252
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 253 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTT 312
Query: 214 L 214
Sbjct: 313 F 313
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 67/92 (72%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR KC EML +++ D D + +++A+E+E+ IY E K+TD +Y+NRVRSRI+N
Sbjct: 185 DSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISN 244
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
LKDP+NP L RN + GAISA +A MTAEV+
Sbjct: 245 LKDPRNPGLRRNVLSGAISAGLIAKMTAEVRA 276
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 22/169 (13%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN-TDNRYKNRVRSRIA 109
+SVR KC EM+ N++ GD S E + +E A++ + K+ + N Y+ ++RS
Sbjct: 185 ESVRDKCVEMIYNAL-AGD-------STAERSVAIEAAVFKQQKSQSGNEYRAKMRSLFL 236
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD NP L + G ++A KLA+++ E +MA++ ++ + K +
Sbjct: 237 NLKDKGNPGLRNEIVLGYLTAEKLASLSKE-------------DMASESIRAMNEKIAND 283
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
++ A+ +TD KCG+C++R CTY Q+QTRSADEPMT + +
Sbjct: 284 NLFKAKAVGETQAETDAFKCGRCQQRKCTYYQMQTRSADEPMTNCGNRW 332
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 88/163 (53%), Gaps = 30/163 (18%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLAS-LEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
+SV KC EML + + D GL S +++A+ +E+ IY E K+ D +Y N V S I
Sbjct: 140 NSVWDKCMEMLSAASKAND-GYXGLXSHXDKMASVIEDNIYEELKSMDMKYWNLVHSXIR 198
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD +NP L RN + G ISA +A MTAE EMA DE++
Sbjct: 199 NLKDXRNPSLRRNVLSGTISAGLIAKMTAE-------------EMACDELR--------- 236
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
Q+ GT TD + KCKK NC+ NQVQ+ SAD+PMT
Sbjct: 237 -----QITKAGGTTTDFFQYSKCKK-NCSNNQVQSCSADKPMT 273
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN 95
PS+ PP + DSVR KC EML ++++ D + + E++A+E+E+ I+ E K+
Sbjct: 227 PSICLLPP--CYLTGDSVRDKCIEMLTAALRMDDDYKEFGVNCEKMASEIEDHIFQELKS 284
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
TD +Y+NRVRSRI+NLKDPKNP L RN + GAI+ + +A MTAEV +
Sbjct: 285 TDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEVHS 331
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 90/172 (52%), Gaps = 23/172 (13%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFK-NTDNRYKNRVRSRIA 109
DSVR KC M+ +++ L S E A +E A +T N Y+ ++RS
Sbjct: 183 DSVRDKCVVMIYDAL--------ALDSTAERAIGIERAANKSMNFSTGNDYRAKMRSLFL 234
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD NP L + G IS K+A+M+ + EMA++ ++ L+ K +
Sbjct: 235 NLKDKGNPALRNEIVLGYISTEKVASMSKD-------------EMASESVRMLKEKIASD 281
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYITV 221
++ A+ V +TD KCG+C +R CTY Q+QTRSADEPM T+ F + +
Sbjct: 282 NLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPM-TVSRFLVHI 332
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E I++E+ + + YK++VR+ NLK NP L + + G ++ KL TM+ E
Sbjct: 172 ALAIETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSVE-- 229
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
EMA++E + K +E++ A+ AT +TD+ KCGKC+ R CTY Q
Sbjct: 230 -----------EMASEEAQARDRKLAEEALFKARGATSAQAETDMFKCGKCQGRKCTYFQ 278
Query: 202 VQTRSADEPMTTL 214
+QTRSADEPMTT
Sbjct: 279 MQTRSADEPMTTF 291
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D+ R KC E++ ++ L D A +E + A +E+ ++++ T YK ++RS
Sbjct: 132 DTTRDKCIELVYDA-----LVNDSSAPVELILSRARGVEKCVHHDNGGTTAAYKQKIRSL 186
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP N I G + KLA MT+E +MA++E K K
Sbjct: 187 FVNLKDKNNPGFRENVISGDVPVEKLAKMTSE-------------DMASEERKAADRKIK 233
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ + A Q +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 234 EENLFKSLSAAEQAAETDAFQCGRCKQRQCRYRQAQTRSADEPMTTF 280
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D+ R KC E++ ++ L D A +E + A +E+ ++++ T YK ++RS
Sbjct: 132 DTTRDKCIELVYDA-----LVNDSSAPVELILSRARGVEKCVHHDNGGTTAAYKQKIRSL 186
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP N I G + KLA MT+E +MA++E K K
Sbjct: 187 FVNLKDKNNPGFRENVISGDVPVEKLAKMTSE-------------DMASEERKAADRKIK 233
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ + A Q +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 234 EENLFKSLSAAEQAAETDAFQCGRCKQRQCRYRQAQTRSADEPMTTF 280
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 22/168 (13%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFK-NTDNRYKNRVRSRIA 109
DSVR KC M+ +++ L S E A +E A +T N Y+ ++RS
Sbjct: 196 DSVRDKCVIMIYDAL--------ALDSTAERAIGIERAANKAMNFSTGNDYRAKMRSLFL 247
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD NP L + G +S K+A+M+ + EMA++ ++ L+ K +
Sbjct: 248 NLKDKGNPALRNEIVLGYVSTEKVASMSKD-------------EMASESVRMLKEKIASD 294
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHF 217
++ A+ V +TD KCG+C +R CTY Q+QTRSADEPMT +
Sbjct: 295 NLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMTVSRYL 342
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 13/113 (11%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML ++Q + A E L+ ++EE I+ + NTD +YKNRVRSRI+N
Sbjct: 10 DAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISN 69
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
LKD KNP L RN + GAI+ ++A MT+E EMA+DE+K +R
Sbjct: 70 LKDAKNPDLRRNVLCGAITPQQIAVMTSE-------------EMASDELKEIR 109
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 27/209 (12%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLA 76
KK E K++ + KKPS P K + D++R K RE+L ++ V + + DG
Sbjct: 140 KKSEEKQQAIDVKKPSQASVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRD 199
Query: 77 SLEE-----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+ + +A +E A++ + ++ K + RS + NLKDP NP L R + G +
Sbjct: 200 EISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPE 259
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+L +MT E EMA+ E + N+ ++++ D + TD KC +
Sbjct: 260 RLISMTPE-------------EMASKERQEEINQIKEKALFDCERGGPAKATTDQFKCSR 306
Query: 192 CKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 307 CGQRKCTYYQMQTRSADEPMTT----YVT 331
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 19/165 (11%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASL-EELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
D +R C ML +S+ G D +AS+ ++A+ +E+ I+ + TD +YK+R+R+ +
Sbjct: 137 DKIRDGCAGMLYSSLASGT---DAVASVVAKIASSIEKHIFAACECTDAKYKSRIRTLTS 193
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK N L + G IS + A MTAE EM ++E K K
Sbjct: 194 NLK--LNASLRSQVLGGKISTDRFAMMTAE-------------EMMSEERVLEVEKAKKN 238
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
S+ DA A Q +TD+ +CG+CK+R TY Q+QTRSADEPMTT
Sbjct: 239 SMADAVSAANQEAETDMFRCGRCKQRKATYYQMQTRSADEPMTTF 283
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 27/186 (14%)
Query: 42 PPQKSHNLTDSVRLKCREMLQ-NSIQVGDLDMDGLASLEELATELEEAIYNEF------- 93
PP+ + D VR E L + GD L S +L +EEA+Y+
Sbjct: 164 PPRCGNETRDKVRSMLAEALAVGYVGGGDTGPSSLQSPNQLGAAIEEALYDLMGGGGGGG 223
Query: 94 ---KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMT 150
+ YK + RS NLKD KNP L + G++ L ++AE
Sbjct: 224 GGREAVSAEYKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAE----------- 272
Query: 151 TFEMANDEMKTLRNKFIKESI--DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
EMA+DE K +N+ +KE + + + AT TD+ +CG+CK+R CTY Q+QTRSAD
Sbjct: 273 --EMASDEQKK-KNRELKEWLAKEAVRGATTNAATTDMFQCGRCKQRKCTYYQLQTRSAD 329
Query: 209 EPMTTL 214
EPMTT
Sbjct: 330 EPMTTF 335
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRV 104
N DS R KC E++ ++ L D A +E + A +E ++ + YK+++
Sbjct: 130 NTGDSTRDKCTELIYDA-----LASDSGAPVELILKHAKAIEASVLADCDGVTAAYKSKI 184
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS NLKD NP L + + G + A K MT++ EMA++E K N
Sbjct: 185 RSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQ-------------EMASEERKAADN 231
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K E+ ++ A Q +TD +C +CK+R C Y Q QTRSADEPMTT
Sbjct: 232 KIRAENFHNSLAAAEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTF 281
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRI 108
L D+ R KC EML +++ + D D ELA ++E ++ F T+ YK + R
Sbjct: 28 LNDATRQKCFEMLAEALEQSESDADYF----ELALDIEAEMFKLFGETNPNYKAKFRQLF 83
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NLK+ KN L + G IS +L MT++ E+A+ E++ R +
Sbjct: 84 MNLKNVKNHDLRLGVLNGHISPERLCQMTSQ-------------ELASKELQEQRKALEE 130
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +A + T++ +C KCKKR CTY Q+QTRSADEPMTT
Sbjct: 131 ACLKEAIRGGQKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTF 176
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 121 RNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ 180
+ ++GA S+ + + A+ + + ++EMA+DE++ LRN +E+I + Q+A
Sbjct: 190 KKMVWGACSSDEQLVVGAQ-ELQGGGSISKSWEMASDELRELRNAMTQEAIREHQMAKTG 248
Query: 181 GTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 249 GTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 282
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D R KC E++ ++ L D A E++ A +E A+ +F YK+++RS
Sbjct: 137 DKTRDKCMELIYDA-----LACDSGAPSEQILGRARAIESAVVAQFSGPSVEYKSKIRSL 191
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP L + + G +S K M++ EMA++E K NK
Sbjct: 192 FVNLKDKNNPGLRESIVSGDLSVEKFG-------------KMSSAEMASEERKAADNKIK 238
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+++ + A Q +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 239 EDNFFKSLGAAEQEAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTF 285
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D R KC E++ ++ L D A E++ A +E + ++F T+ YK ++RS
Sbjct: 145 DKTRDKCAELIYDA-----LAFDSGAPSEQILSRAKAIESTVLSQFNGTNAEYKAKIRSL 199
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP L + + G + + M+++ EMA++E K N+ +
Sbjct: 200 FVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQ-------------EMASEERKAADNRIM 246
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ + A +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 247 EENLFKSLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTF 293
>gi|50730263|ref|XP_416834.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Gallus gallus]
Length = 359
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 14 SNNKDSSSKKKEAKEEKKED---KKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDL 70
SNN D S + EE D KP V + Q+ H ++R KC ++L ++
Sbjct: 141 SNNADGSRDQLSPFEEGHTDNEGSKPLVNEAGSQQDH--MRALRCKCTDLLYKALTGSAK 198
Query: 71 DMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISA 130
D + EL+ E+EE ++ D +YKN +RS+I+NLK+PK+ L N G +S
Sbjct: 199 DKEETDKWLELSKEIEEHVFALHCKNDKKYKNCIRSKISNLKNPKSCNLKHNLFSGTLSP 258
Query: 131 SKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKC 189
A MT EMA+DE+K LR + + SI + QL + GT+T+ +KC
Sbjct: 259 KAFAE-------------MTVMEMASDELKQLRALYTESSIQEHQLPQVINGTQTNKIKC 305
Query: 190 GKCKKRNCTYNQV 202
+C+K +CT +
Sbjct: 306 RRCEKSDCTVTMI 318
>gi|326913628|ref|XP_003203138.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Meleagris gallopavo]
Length = 381
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 19/194 (9%)
Query: 13 ISNNKDSSSKKKEAKEE---KKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+SNN + S + A EE E KP V + Q+ H ++R KC ++L ++
Sbjct: 162 VSNNAEGSIDQLSAFEEGCINNEGCKPLVNEAGLQQDH--MRALRCKCTDLLYKALTGSA 219
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
D + EL+ E+EE ++ D +YKN +RS+I+NLK+PK+ L N G +S
Sbjct: 220 KDKEETDKWLELSKEIEEHVFALHSKNDRKYKNCIRSKISNLKNPKSCNLKHNLFSGTLS 279
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLK 188
A MT EMA+DE+K LR + + SI + QL + GT+T +K
Sbjct: 280 PKAFAE-------------MTVMEMASDELKQLRALYTESSIQEHQLPQVINGTQTSKIK 326
Query: 189 CGKCKKRNCTYNQV 202
C +C+K +CT +
Sbjct: 327 CRRCEKFDCTVTMI 340
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 21/169 (12%)
Query: 59 EMLQNSIQVGDLD--MDGLA----SLEELATELEEAIYNEFKNTD--NRYKNRVRSRIAN 110
E LQ+ ++ G + D L + +L E ++I +E T+ N YKN++RS I N
Sbjct: 98 ESLQDKVRDGSMKSVFDALIFDSDAPADLVYERAKSIESEVNRTNDSNGYKNKMRSLIFN 157
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LKD NP L + G IS+ KL +M +MA++E K K +E+
Sbjct: 158 LKDKNNPGLREAVVSGEISSMKLCSMGPA-------------DMASEERKAQDRKLAEEN 204
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
+ A+ A Q +TD +CG+C +R CTY Q+QTRSADEPMT F+
Sbjct: 205 LFKARGAGPQQAETDAFRCGRCGQRKCTYYQMQTRSADEPMTVSFEFFF 253
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 13/138 (9%)
Query: 77 SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
++ E A ++E A+YN+ T+ YK ++R+ ANLK NP L + G + ++LATM
Sbjct: 149 TIAEKARDVEAAVYNQNGCTNEAYKTKLRTLTANLKAKSNPGLRARVLKGELEPARLATM 208
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRN 196
+ +MA++E K +K +++I ++ A Q +TD +CG+CK+R
Sbjct: 209 S-------------VADMASEERKAADSKIREQTIHESLGAAEQEAETDAFQCGRCKQRK 255
Query: 197 CTYNQVQTRSADEPMTTL 214
C Y Q QTRSADEPMTT
Sbjct: 256 CRYRQAQTRSADEPMTTF 273
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 89/170 (52%), Gaps = 21/170 (12%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLD--MDGLASLEELATELEEAIYNEF--KNTDNRYKNRV 104
L D VR C ++L NS++V D AS A ++EEA Y + T+N Y+ +V
Sbjct: 139 LNDRVRNACLKLLYNSLEVQDHAEPQTVFAS----AMKIEEAAYTKIGASTTNNDYRGKV 194
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS NLKD NP L + + G I L M +E E+A+ +K +
Sbjct: 195 RSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSE-------------ELASKSLKEQQE 241
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++++ +A+ A Q +TD +CGKCK+R Y Q+QTRSADEPMTT
Sbjct: 242 SIRQQNLHNAKGAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTF 291
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 35/213 (16%)
Query: 24 KEAKEEKKEDKKPSVTQYP--------------PQKSHNLTDSVRLKCREMLQNSIQVGD 69
K K + K KK S TQ P P+ S++L +S+R + + L S+ +
Sbjct: 133 KALKVQNKSFKKVSRTQTPKILTPHPHSKAASIPKSSNSLRESIREQISQAL--SMVFNE 190
Query: 70 LDMDGLASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D L + + ++A LE A++ ++ ++ R + + RS + N+KDPKNP R + G
Sbjct: 191 AKHDTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGE 250
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
I A ++A M A +MA+DEM+ +S+ + Q TD
Sbjct: 251 IKAEEVAEMDAG-------------QMASDEMQRKNQGIQAKSLWKCIVGREQEGTTDQF 297
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
KCGKC ++ TY Q+QTRSADEPMTT Y+T
Sbjct: 298 KCGKCGEKRTTYYQMQTRSADEPMTT----YVT 326
>gi|444731638|gb|ELW71990.1| Transcription elongation factor A protein 1, partial [Tupaia
chinensis]
Length = 151
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 11/90 (12%)
Query: 136 MTAEVQTRSADEP-----------MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
MT E+ ++A +P + +EMA+DE+K +R KE+I + Q+A GT+T
Sbjct: 15 MTLELLQKAAGKPCDHQEFQGPCRIQIWEMASDELKEMRKNLTKEAIREHQMAKTGGTQT 74
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 75 DLFTCGKCKKKNCTYTQVQTRSADEPMTTF 104
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATE 84
EA+ +D K V + Q+ +L ++R KC ++L ++ D + ELA E
Sbjct: 156 EAQHTVDDDSKFVVGEASLQQ--DLMRALRCKCVDLLYKALIDSAKDEEETGKWLELAKE 213
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+EE I+ D +YKN +RS+I+NLK+PK+ L N G +S A
Sbjct: 214 IEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFA---------- 263
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRNCTYNQV 202
MT EMA+DE+K LR + K S+ + QL + GT+T+ +KC +C+K +CT +
Sbjct: 264 ---EMTVMEMASDELKQLRALYTKSSVQEHQLPQVINGTQTNKIKCRRCEKFDCTVTMI 319
>gi|334346763|ref|XP_003341849.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Monodelphis domestica]
Length = 366
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D +R KC E+L ++ D L++LA E+EE I+ + +YKN +RS+++N
Sbjct: 186 DPMRSKCVELLYGALVTCATDQQKTDHLQKLAREIEEYIFVLYSKNLKKYKNCIRSKVSN 245
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LK+ KNP L +N G +S + A MT EMAN+E+K LR + +
Sbjct: 246 LKNQKNPHLQQNLFSGTLSPKEFAE-------------MTVMEMANEELKQLRASYTESC 292
Query: 171 IDDAQL-ATVQGTKTDLLKCGKCKKRNC 197
I + L V GT+TD +KC +C+K NC
Sbjct: 293 IQEHCLPQMVDGTQTDKIKCRRCEKFNC 320
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATE 84
EA+ +D K V + Q+ +L ++R KC ++L ++ D + ELA E
Sbjct: 177 EAQHTVDDDSKFVVGEASLQQ--DLMRALRCKCVDLLYKALIDSAKDEEETGKWLELAKE 234
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+EE I+ D +YKN +RS+I+NLK+PK+ L N G +S A
Sbjct: 235 IEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFA---------- 284
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRNCTYNQV 202
MT EMA+DE+K LR + K S+ + QL + GT+T+ +KC +C+K +CT +
Sbjct: 285 ---EMTVMEMASDELKQLRALYTKSSVQEHQLPQVINGTQTNKIKCRRCEKFDCTVTMI 340
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 102/207 (49%), Gaps = 31/207 (14%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLA 76
KK + + E KK S + P K ++ D++R K RE+L + V + + + LA
Sbjct: 129 KKPKVETESIGSKKASSSSNGPPKLTSMIKCNDALRDKFREILYEAFSKVVNEAEGEDLA 188
Query: 77 SLE-----ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+ +A +E ++ + ++ K + RS + NLKD NP L R + G I
Sbjct: 189 RVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPE 248
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK----TDLL 187
KL MTAE EMA+D K L NK IK D A +G K TD
Sbjct: 249 KLIVMTAE-------------EMASDNRK-LENKQIK---DKALFECERGMKPKATTDQF 291
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
KCGKC +R CTY Q+QTRSADEPMTT
Sbjct: 292 KCGKCGQRMCTYYQLQTRSADEPMTTF 318
>gi|145699116|ref|NP_001007578.2| transcription elongation factor A N-terminal and central
domain-containing protein [Mus musculus]
gi|134034939|sp|Q3US16.1|TEANC_MOUSE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|74187673|dbj|BAE24521.1| unnamed protein product [Mus musculus]
gi|148708776|gb|EDL40723.1| mCG7558 [Mus musculus]
Length = 359
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 6 LFP---APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQ 62
L P A P + +SS+ + E E + T+ SVR KC E+L
Sbjct: 132 LLPQDAAKPAAAIGSESSTAQMEINEGYLKGDDSECTRKSSGVFQGTLVSVRSKCVELLY 191
Query: 63 NSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRN 122
++ D + + LA E+EE I+ N +YK +RS++ANLK+P+N L +N
Sbjct: 192 TALASSCTDHTEVHIWQNLAREIEEHIFTLHSNNIKKYKTSIRSKVANLKNPRNFHLQQN 251
Query: 123 YIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQG 181
++ G +SA + A M+ +MA+ E+K LR + + SI + L +V G
Sbjct: 252 FLSGTMSAREFA-------------EMSVLDMASQELKQLRASYTESSIQEHCLPQSVDG 298
Query: 182 TKTDLLKCGKCKKRNCTY-----------NQVQTRSADEPMT 212
T T+ +KC +C K NC + VQ + DE MT
Sbjct: 299 TWTNKIKCRRCDKYNCKVTVIARGTLFLPSWVQNSNPDEQMT 340
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 27/197 (13%)
Query: 34 KKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLASLE-----ELAT 83
KKPS P K L D++R K RE+L ++ + D D +E +A
Sbjct: 144 KKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAV 203
Query: 84 ELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
+E A++ + ++ K + RS + N+KD NP L R + G + +L TM E
Sbjct: 204 SVESAMFEKLGRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPE---- 259
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
EMA+++ K N+ ++++ D + TD KCG+C +R CTY Q+Q
Sbjct: 260 ---------EMASEQRKRENNQIKEKALFDCERGGKAEATTDQFKCGRCGQRKCTYYQMQ 310
Query: 204 TRSADEPMTTLHHFYIT 220
TRSADEPMTT Y+T
Sbjct: 311 TRSADEPMTT----YVT 323
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 96/191 (50%), Gaps = 30/191 (15%)
Query: 37 SVTQYPPQKSHNL--TDSVRLKCREMLQNSIQ--VGDLDMDGLASLE-----ELATELEE 87
S + PP+ + + D+VR K RE++ + V + + + + + +A +E
Sbjct: 142 SSSNGPPKLTSMIKCNDAVRDKIREIIYEAFSKVVNEAEGENMVRINACDPVRVAVTVET 201
Query: 88 AIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADE 147
++ + ++ K + RS I NLKD NP L R + G I KL MTAE
Sbjct: 202 LMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAE-------- 253
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK----TDLLKCGKCKKRNCTYNQVQ 203
EMA+D+ K L NK IK D A +G K TD KCGKC +R CTY Q+Q
Sbjct: 254 -----EMASDQRK-LENKQIK---DKALFECERGIKPKATTDQFKCGKCGQRKCTYYQLQ 304
Query: 204 TRSADEPMTTL 214
TRSADEPMTT
Sbjct: 305 TRSADEPMTTF 315
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 31 KEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQV--GDLD---MDGLASLE--E 80
KE+KKPS P K ++ D+ R K RE+L + G+ D MD + + +
Sbjct: 97 KEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIR 156
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E ++ + + K + RS + NLKDPKNP R + G I ++ M+
Sbjct: 157 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMS--- 213
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
T +MA+D+ K + ++++ D + TD KCG+C +R TY
Sbjct: 214 ----------TADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYY 263
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 264 QLQTRSADEPMTTF 277
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 31 KEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQV--GDLD---MDGLASLE--E 80
KE+KKPS P K ++ D+ R K RE+L + G+ D MD + + +
Sbjct: 176 KEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIR 235
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E ++ + + K + RS + NLKDPKNP R + G I ++ M+
Sbjct: 236 VAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMS--- 292
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
T +MA+D+ K + ++++ D + TD KCG+C +R TY
Sbjct: 293 ----------TADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYY 342
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 343 QLQTRSADEPMTTF 356
>gi|297282476|ref|XP_001102747.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Macaca mulatta]
gi|402853350|ref|XP_003891359.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 105
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 122 NYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQG 181
++ G + + + + ++++R + + EMA+DE++ LRN +E+I + Q+A G
Sbjct: 1 SWAAGDSAGTAFSQLGQDLESRPPSSSLQS-EMASDELRELRNAMTQEAIREHQMAKTGG 59
Query: 182 TKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
T TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 60 TTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTF 92
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 19/151 (12%)
Query: 70 LDMDGLASLEELAT---ELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L D A + +AT ++EEA+Y ++ +T Y+ + RS + N KD KNP L +
Sbjct: 180 LASDSAAPADMIATRVMDVEEAVYKFYEGDTSGDYRQKTRSLLLNFKDKKNPALREAVVS 239
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI--DDAQLATVQGTK 183
G +SASKLA+M A + +++E K K ++++ + K
Sbjct: 240 GELSASKLASMKAS-------------DFSSEERKAEDRKLAEQNMFAAQSAAPAAGQAK 286
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TD KCGKC KR CTY Q+QTRSADEPMTT
Sbjct: 287 TDAFKCGKCGKRECTYYQMQTRSADEPMTTF 317
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 26/183 (14%)
Query: 42 PPQKSHNLTDSVRLKC--REMLQNSIQVGDLDMDGLASLEE--------LATELEEAIYN 91
P K ++ TD V+ + E N ++ L DGLA + E +A +E A Y+
Sbjct: 127 PSDKRNHKTDKVKYQVTGNEARDNCVR---LMYDGLAFMSEAMPDEILNIAKHVEAAAYS 183
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
+ ++ YK ++RS NLK+ NP L + + G I+A + MT +
Sbjct: 184 NAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHD------------ 231
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
EM +D + K KE+++ A +A V+ + +CGKCK++ +Y+Q QTRSADEPM
Sbjct: 232 -EMKSDARRAEDEKLEKENMNQAMVAQVEKAISKEFQCGKCKQKKVSYSQAQTRSADEPM 290
Query: 212 TTL 214
TT
Sbjct: 291 TTF 293
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 26/183 (14%)
Query: 42 PPQKSHNLTDSVRLKC--REMLQNSIQVGDLDMDGLASLEE--------LATELEEAIYN 91
P K ++ TD V+ + E N ++ L DGLA + E +A +E A Y+
Sbjct: 127 PSDKRNHKTDKVKYQVTGNEARDNCVR---LMYDGLAFMSEAMPDEILNIAKHVEAAAYS 183
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
+ ++ YK ++RS NLK+ NP L + + G I+A + MT +
Sbjct: 184 NAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHD------------ 231
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
EM +D + K KE+++ A +A V+ + +CGKCK++ +Y+Q QTRSADEPM
Sbjct: 232 -EMKSDARRAEDEKLEKENMNQAMVAQVEKAISKEFQCGKCKQKKVSYSQAQTRSADEPM 290
Query: 212 TTL 214
TT
Sbjct: 291 TTF 293
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 19/172 (11%)
Query: 46 SHNLTDS-VRLKCREMLQNSIQVGDLDMDGLAS-LEELATELE-EAIYNEFKNTDNRYKN 102
S N+TD +R C +L N++ +D D +S L + A+ ++ + + TD+ Y+N
Sbjct: 128 SINVTDDRIRNNCIGLLYNALA---MDTDEPSSVLLKTASAIDVQVLSMSMGKTDSAYRN 184
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
++RS NLKD +NP L + I GAIS +L+ M++ E+A+++ +
Sbjct: 185 KMRSLYMNLKDKQNPQLRKRVISGAISPKRLS-------------EMSSAELASEDRRKE 231
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K +E++ AQ A Q TDL CGKCK++ +Y Q+QTRSADEPMTT
Sbjct: 232 DAKLEQENLFHAQGAKPQKAITDLFTCGKCKQKKVSYFQMQTRSADEPMTTF 283
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 24/177 (13%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEEL--ATELEEAIYNEFKNTDNRYKNR 103
D VR K RE+L +++ + D + + + + L A +E ++ + + K +
Sbjct: 208 DPVRDKIRELLVDALCRVAGEADDYERKSVNASDPLRVAVSVESLMFEKLGRSTGAQKLK 267
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NL+D NP L R + G IS KL T++AE EMA+D+ K
Sbjct: 268 YRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAE-------------EMASDKRKQEN 314
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
N+ ++++ D + TD KCG+C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 315 NQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTT----YVT 367
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELAT---ELEEAIYNEFKNTDNRYKNRVRSR 107
D R KC E++ ++ L D A E++ T ++E+ ++N+ + YK ++RS
Sbjct: 145 DKTRDKCAELIYDA-----LVFDSGAPSEQVMTRAKDIEKTVFNDNSGANAAYKAKIRSL 199
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP L + + G ++ +K M+++ +MA++E K K
Sbjct: 200 FVNLKDKNNPGLRESVVSGDLAIAKFCRMSSQ-------------DMASEERKAADAKIA 246
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ A +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 247 QENLFKTLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTF 293
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 24/177 (13%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEEL--ATELEEAIYNEFKNTDNRYKNR 103
D VR K RE+L ++ + D + + + + + L A +E ++ + + K +
Sbjct: 208 DPVRDKIRELLMEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRSTGAQKLK 267
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NL+D NP L R + G IS KL T++AE +MA+D+ K
Sbjct: 268 YRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAE-------------DMASDKRKQEN 314
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
N+ ++++ D + TD KCG+C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 315 NQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTT----YVT 367
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 18/147 (12%)
Query: 70 LDMDGLASLEELATELEEAIYNEFKNT--DNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D D A +L E +AI E T N YK ++RS I NL+D NP L + + G
Sbjct: 239 FDSDAPA---DLIYERAKAIETEVNKTHDSNGYKIKMRSLIFNLRDKNNPGLRESVVSGE 295
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
ISAS+L M + +MA++E K K +E++ A+ A Q +TD
Sbjct: 296 ISASRLCVMGPQ-------------DMASEERKAQDRKLAEENLFKARGAGPQQAETDAF 342
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
+C +C +R CTY Q+QTRSADEPMTT
Sbjct: 343 RCARCGQRKCTYYQMQTRSADEPMTTF 369
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E+A + +K Y+ ++RS NLK+ NP L R + G I+A M+++
Sbjct: 200 AIEVEKAAFVVYKGETAEYRAKLRSLFQNLKNRSNPALGRRVVAGEIAADAFVVMSSD-- 257
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ + +K L + KE++ AQ+ + + +D L CGKCK+R +Y Q
Sbjct: 258 -----------ELKSAHLKQLESDLQKENMKKAQVPMTEKSISDALTCGKCKQRKVSYTQ 306
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 307 AQTRSADEPMTTF 319
>gi|296207010|ref|XP_002750408.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Callithrix jacchus]
gi|332807943|ref|XP_001165502.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Pan troglodytes]
Length = 75
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMT
Sbjct: 1 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 60
Query: 213 TL 214
T
Sbjct: 61 TF 62
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 18/136 (13%)
Query: 81 LATELEEAIYNEFKNTD--NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
LA +E +IY + N++ +YK VRS++ NLK +N + + G+I K+A MT+
Sbjct: 174 LAQSIEASIY-KLHNSEVSPKYKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTS 230
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E EMA E+ R K E+++DAQ+ + +KTD L+CGKC KR+ +
Sbjct: 231 E-------------EMATKELNAERKKLTTEAMNDAQMPAPKMSKTDQLRCGKCGKRDAS 277
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRS+DEPMTT
Sbjct: 278 YFQLQTRSSDEPMTTF 293
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 14/136 (10%)
Query: 80 ELATELEEAIYNEFKNT-DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
EL ++E+ + T D+ Y+N++RS I NLK+ NP L R+ + I SKL TM+A
Sbjct: 194 ELVKDIEKQCFKAVNFTVDDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSA 253
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
+ E+A D +K + K+++ DAQ AT + TD +CGKCK+R +
Sbjct: 254 Q-------------ELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCKQRKVS 300
Query: 199 YNQVQTRSADEPMTTL 214
Y Q QTRSADEP+TT
Sbjct: 301 YFQKQTRSADEPLTTF 316
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 21/150 (14%)
Query: 73 DGLASLEE--------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYI 124
DGLA + E +A ++E A Y + ++ YK ++RS NLK NP L + +
Sbjct: 157 DGLAYMSEAMPDEILLVAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVL 216
Query: 125 FGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
G + A + TMT + EM +DE + L K E++++A +A V+ +
Sbjct: 217 TGEVPAKRFVTMTHD-------------EMKSDERRALDEKLKAENMNEAMVAQVEKAIS 263
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+C KCKK+ +Y+Q QTRSADEPMTT
Sbjct: 264 KEFQCSKCKKKMVSYSQAQTRSADEPMTTF 293
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Query: 49 LTDSVRLKCREMLQNSIQVG-DLDMDGLASLEELATELEEAIY-NEFKNTDNR-YKNRVR 105
L D VR C ++L S+++G + + + + + A +E AI N+ K + Y+N+VR
Sbjct: 147 LNDKVRNACLKLLYQSLEIGKESHVWNDSQIFDAAVAVEAAILSNQGKGSVTADYRNKVR 206
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNK 165
S N+KD NP L + G I+A KL TMT E E+A+D+ K +
Sbjct: 207 SLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTNE-------------ELASDKRKREIEE 253
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+++ A+ A Q +TD +CG+CK+R Y Q+QTRSADEPMTT
Sbjct: 254 LQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTF 302
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 90 YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
+N Y+ R+RS NLKD NP L + + G I+A KLA M
Sbjct: 1 FNSHGGASTEYRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLA-------------KM 47
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
++ EMA++E + K +E+ + A Q +TD +CG+CK+R C Y Q QTRSADE
Sbjct: 48 SSAEMASEERQAADQKIKQENFFASLGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADE 107
Query: 210 PMTTL 214
PMTT
Sbjct: 108 PMTTF 112
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLAS---------LEELATELEEAIYNEFK-NTDNRY 100
DSVR KC M+ +++ + ++ L L+E A +E A +T N Y
Sbjct: 152 DSVRDKCVVMIYDALALDSTAVERLIDATQIIEIKILKERAVGIERAANKAMNFSTGNDY 211
Query: 101 K--------NRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
+ +RS NLKD NP L + G +S K+A+M+ +
Sbjct: 212 RANQLAKSEQEMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKD------------- 258
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA++ ++ L+ K +++ A+ V +TD KCG+C +R CTY Q+QTRSADEPMT
Sbjct: 259 EMASESVRMLKEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMT 318
Query: 213 TL 214
T
Sbjct: 319 TF 320
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 14/136 (10%)
Query: 80 ELATELEEAIYNEFKNT-DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
EL ++E+ + T D+ Y+N++RS I NLK+ NP L R+ + I SKL TM+A
Sbjct: 150 ELVKDIEKQCFKAVNFTVDDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSA 209
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
+ E+A D +K + K+++ DAQ AT + TD +CGKCK+R +
Sbjct: 210 Q-------------ELAPDSLKKEMEEIYKKNLFDAQGATENNSVTDRFECGKCKQRKVS 256
Query: 199 YNQVQTRSADEPMTTL 214
Y Q QTRSADEP+TT
Sbjct: 257 YFQKQTRSADEPLTTF 272
>gi|221041960|dbj|BAH12657.1| unnamed protein product [Homo sapiens]
Length = 117
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 48/62 (77%)
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
EMA+DE+K +R KE+I + Q+A GT+TDL CGKCKK+NCTY QVQTRSADEPMT
Sbjct: 43 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 102
Query: 213 TL 214
T
Sbjct: 103 TF 104
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 18 DSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLAS 77
++S+ + E KEE P T + + T +R KC E+L ++ D
Sbjct: 139 ENSAIQMECKEEHLGGGDPKSTGKRSVELLDPTTPMRTKCVELLYTALTGSSTDQPKAPL 198
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+ A E+EE I+ + +YK +RS++ANLK+P+N L +N + GA+S + A MT
Sbjct: 199 WQNFAREIEEHIFTRYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGALSPREFAEMT 258
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRN 196
EMAN+E+K LR + + I + L + GT+T ++C +C+K N
Sbjct: 259 V-------------MEMANEELKQLRASYTESCIQEHYLPQGIDGTQTKKIRCRRCEKYN 305
Query: 197 C 197
C
Sbjct: 306 C 306
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 21/150 (14%)
Query: 73 DGLASLEE--------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYI 124
DGLA + E +A ++E A Y + ++ YK ++RS NLK NP L + +
Sbjct: 157 DGLAYMSEAMPDEILLVAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKSNPALRKRVL 216
Query: 125 FGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
G + A + MT + EM +DE + L K E++++A +A V+ +
Sbjct: 217 IGEVPAKRFVVMTHD-------------EMKSDERRALDEKLKAENMNEAMVAQVEKAIS 263
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+C KCKK+ +Y+Q QTRSADEPMTT
Sbjct: 264 KEFQCSKCKKKMVSYSQAQTRSADEPMTTF 293
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 24/177 (13%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEEL--ATELEEAIYNEFKNTDNRYKNR 103
D VR K RE+L ++ + D + + + + + L A +E ++ + + K +
Sbjct: 208 DPVRDKIRELLVEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRSTGAQKLK 267
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NL+D NP L R + G IS KL T++AE +MA+D+ K
Sbjct: 268 YRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAE-------------DMASDKRKQEN 314
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
N+ ++++ D + TD KCG+C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 315 NQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTT----YVT 367
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLE-ELATELEEAIYNEFKNTDNRYKNRVRSRI 108
+D R KC E++ +++ D A L + A +E + ++F+ T YK ++RS
Sbjct: 158 SDKTRDKCIELIYDALAS---DSSAPADLVLKRARGIESDVLSQFRTTGAEYKAKIRSFF 214
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NLKD NP L + G + K A MT SAD MA++E + K +
Sbjct: 215 VNLKDKNNPGLRAAVVSGELPVEKFAKMT------SAD-------MASEERRAQDQKIRE 261
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E++ + A Q +TD +C +CK+R C Y Q QTRSADEPMTT
Sbjct: 262 ENLFQSLGAEEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTF 307
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 18/147 (12%)
Query: 70 LDMDGLASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
L MD + L + A E+E ++ + ++ YK + RS I NLK N +L +N +
Sbjct: 182 LKMDEITELHYNQAAVEIESQLFETYGGANSDYKVKARSIIFNLKS--NHLLKKNILSKT 239
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
++ ++ TM A EMAN E+K R + +K S + A L+ T TD
Sbjct: 240 LTVTRFCTMDAT-------------EMANKELKEERERMLKYSREAATLSREAAT-TDQF 285
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
+CGKCK+R CTY Q+QTRSADEP+TT
Sbjct: 286 QCGKCKQRKCTYFQLQTRSADEPLTTF 312
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 29/212 (13%)
Query: 16 NKDSSSKKKEAKEE-KKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSI--QVGDLDM 72
NK ++ + KE+ K EDK VT+ P + D RLK RE+ + + G+ D+
Sbjct: 97 NKSAAGEGSNGKEKVKSEDK---VTKKPAEP----VDGKRLKVRELFEKAFADWKGESDV 149
Query: 73 DGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
D ++L+ +E A+Y F + +Y N +S NL DPKNP IFG I A +
Sbjct: 150 D----RKDLSARIESAMYEHFGGANEQYLNHAKSVKFNLSDPKNPDFRSKVIFGDIDAEE 205
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNK-FIKESIDDAQLATVQGTKTDLLKCGK 191
+ +++ + A + + AN E K ++K FI A G ++D+ +C K
Sbjct: 206 IPKLSS---GQMAGKDKIEQKKANKEDKIFQDKMFI--------TAGNLGAESDMFQCRK 254
Query: 192 CKKRNCTYNQVQTRSADEPMTT---LHHFYIT 220
CK++ T+ Q QTRSADEPMT L +IT
Sbjct: 255 CKQKRTTFYQKQTRSADEPMTAELPLLQVFIT 286
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 45 KSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
+ H +VR KC ++L ++ + +A + A E+E+ I+ D +YKN +
Sbjct: 164 QQHGPIMAVRGKCTQLLFEALTDSSTSNEEIAKHHQTAEEIEQHIFALHAGNDRKYKNSI 223
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS+++NLK+PKN L + G +S A M+A EMA+DE+K LR
Sbjct: 224 RSKVSNLKNPKNYHLKHSLHIGVLSPQTFAGMSA-------------VEMAHDELKQLRA 270
Query: 165 KFIKESIDDAQLAT-VQGTKTDLLKCGKCKKRNCT 198
+ K ++ + QL + GT T+ +KC +C+K NCT
Sbjct: 271 SYTKSAVQEHQLPQRISGTLTNKIKCRRCEKFNCT 305
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 14/143 (9%)
Query: 73 DGLASLEELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
D ++ +ATE+E ++ +E+ N ++ Y+NR+R+ NL++ KNP L + G I+ S
Sbjct: 167 DDSKTILRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNLRNKKNPELRARLLSGQITPS 226
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
MT EMA + +K K K+++ DAQ AT + TD CGK
Sbjct: 227 SFIKMTPN-------------EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGK 273
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
CK + +Y Q+QTRSADEP+TT
Sbjct: 274 CKHKKVSYYQMQTRSADEPLTTF 296
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 18/147 (12%)
Query: 70 LDMDGLASLEELATELEEAIYNEFKNT--DNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D D A +L E +AI E T N YK ++RS I NL+D NP L + + G
Sbjct: 239 FDSDAPA---DLIYERAKAIETEVNKTHDSNGYKIKMRSLIFNLRDKNNPGLRESVVSGE 295
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
ISA +L M + +MA++E K K +E++ A+ A Q +TD
Sbjct: 296 ISAGRLCVMGPQ-------------DMASEERKAQDRKLAEENLFKARGAGPQQAETDAF 342
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
+C +C +R CTY Q+QTRSADEPMTT
Sbjct: 343 RCARCGQRKCTYYQMQTRSADEPMTTF 369
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 27/197 (13%)
Query: 34 KKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLASLE-----ELAT 83
K+PS + P K L D++R K RE+L ++ + D D +E +A
Sbjct: 162 KQPSQSPIGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAV 221
Query: 84 ELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
+E ++ + ++ K + RS + N+KD NP R + G + +L TM E
Sbjct: 222 SVESMMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPE---- 277
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
EMA+++ K N+ ++ + D + + TD KCG+C++R CTY Q+Q
Sbjct: 278 ---------EMASEQRKRENNQIKEKVLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQ 328
Query: 204 TRSADEPMTTLHHFYIT 220
TRSADEPMTT Y+T
Sbjct: 329 TRSADEPMTT----YVT 341
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCREML ++Q D + A E +A ++EE IY + KNTD +YKNRVRSRI+N
Sbjct: 137 DAVRNKCREMLTAALQADDDYIAIGADCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISN 196
Query: 111 LKDPKNPMLSRNYIFGAIS 129
LKD KNP L +N + GAI+
Sbjct: 197 LKDSKNPELKKNVLCGAIT 215
>gi|354493939|ref|XP_003509097.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cricetulus griseus]
Length = 420
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR K E+L +++ D + LA E+EE I+ + +YK +RS++ANL
Sbjct: 162 SVRSKGIELLYSALASSSTDYTKTHLWQNLAREIEEHIFTLHSSNIKKYKICIRSKVANL 221
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
+PKN L + + G +SA + A MT +MAN+E+K LR + + SI
Sbjct: 222 NNPKNSHLQQKLLSGTMSAREFA-------------EMTVLDMANEELKQLRASYTESSI 268
Query: 172 DDAQL-ATVQGTKTDLLKCGKCKKRNCTY-----------NQVQTRSADEPMT 212
+ L TV+GT+T+ +KC +C+K NC + VQ + DE MT
Sbjct: 269 QEHHLPQTVEGTQTNKIKCRRCEKYNCKITVIARGTLFLPSWVQNSNPDEQMT 321
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 18 DSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDS---VRLKCREMLQNSIQVGDLDMDG 74
+S + E KEE P T ++S L D VR KC E+L+ ++ D
Sbjct: 139 ESGPSQVEPKEEHVSGGDPKSTD---KRSSELLDPAVPVRTKCTEILREALTSSSTDQPQ 195
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
LA E+E I+ + +YK +RS++ANLK+PKN L +N + G +S + A
Sbjct: 196 ADLWHSLAREIEGHIFTLYSKNLKKYKACIRSKVANLKNPKNSHLQQNLLSGTMSPREFA 255
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCK 193
MT EMA++E+K LR + + SI + L ++GT+T +KC +C+
Sbjct: 256 E-------------MTVMEMASNELKQLRASYAESSIREHYLPQAIEGTQTKKIKCRRCE 302
Query: 194 KRNC 197
K NC
Sbjct: 303 KFNC 306
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 38/217 (17%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTD-SVRLKCREMLQNSI 65
PAPP ++ A+++KK D P + K ++N+T R C ++
Sbjct: 100 PAPP-----PSGTASPAPAQQKKKHDVAPDKRNHKTDKVNYNVTGHEARDGCVRLM---- 150
Query: 66 QVGDLDMDGLASLEE--------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNP 117
DGLA + E +A +E A Y + ++ YK ++RS NLK+ NP
Sbjct: 151 ------YDGLAFMSEALPDDIITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNP 204
Query: 118 MLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA 177
L ++ + G I K M+ + EM +D + K KE+++ A +A
Sbjct: 205 ALRKDVLSGKIQPKKFVVMSHD-------------EMKSDSRRAEDEKLEKENMNQAMVA 251
Query: 178 TVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
V+ + + +CGKCKK+ +Y+Q QTRSADEPMTT
Sbjct: 252 QVEKSISKEFQCGKCKKKMVSYSQAQTRSADEPMTTF 288
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++A LE A++ ++ ++ R + + RS + N+KDPKNP R + G I A ++A M A
Sbjct: 18 QIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKAEEVAEMDAG 77
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
+MA+DEM+ +S+ + Q TD KCGKC ++ TY
Sbjct: 78 -------------QMASDEMQRKNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEKRTTY 124
Query: 200 NQVQTRSADEPMTTLHHFYITV 221
Q+QTRSADEPMTT Y+T
Sbjct: 125 YQMQTRSADEPMTT----YVTC 142
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 28 EEKKEDKKPSVTQYPPQKSHNLTDS--VRLKCREMLQNSIQVGDLDMDGLASLEELATEL 85
EE ED P T ++S L D +R KC E+L +++ D + A E+
Sbjct: 148 EEHFEDGDPESTG---KRSSELLDPTPMRTKCIELLYSALTTSSTDQPKADLWQNFAREI 204
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EE ++ + +YK +RS++ANLK+PKN L +N G +S + A MT
Sbjct: 205 EEHVFALYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPQEFAEMTV------- 257
Query: 146 DEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRNCTY----- 199
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 258 ------MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTAIAR 311
Query: 200 ------NQVQTRSADEPMTT 213
V+ +ADE M T
Sbjct: 312 GALFLPTWVRNSNADEQMMT 331
>gi|296234921|ref|XP_002807916.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein
[Callithrix jacchus]
Length = 382
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDS--VRLKCREMLQNSIQVGDLDMDGLASLEELATE 84
KEE ED P T ++S L D +R KC E+L +++ D + A E
Sbjct: 179 KEEHFEDGDPESTG---KRSSELLDPTPMRTKCIELLYSALTTSSTDQPRADLWQNFARE 235
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+EE ++ + +YK +RS++ANLK+PKN L +N G +S + A M+
Sbjct: 236 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPREFAEMSV------ 289
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNCTY---- 199
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 290 -------MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTTIA 342
Query: 200 -------NQVQTRSADEPMTT 213
V+ +ADE M T
Sbjct: 343 RGTLFLPTWVRNSNADEQMMT 363
>gi|297666066|ref|XP_002811364.1| PREDICTED: transcription elongation factor A protein 3-like [Pongo
abelii]
Length = 74
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 48/61 (78%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MA+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSADEPMTT
Sbjct: 1 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTT 60
Query: 214 L 214
Sbjct: 61 F 61
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 19/194 (9%)
Query: 13 ISNNKDSSSKKKEAKEEKK---EDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD 69
+ N+ S + + EE+ ED +P V + Q+ + +R KC ++L ++
Sbjct: 141 VCNDAQGSVSQLSSFEEQHIDNEDSEPLVNKASLQQ--DPVRVLRCKCTDLLYKALAGSA 198
Query: 70 LDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
D + EL+ E+EE I++ + +YKN +RS+I+NLK+PK+ L N G +S
Sbjct: 199 KDKEETDKWLELSKEIEEHIFSLHAKNNKKYKNCIRSKISNLKNPKSCHLRHNLFSGTLS 258
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLK 188
A MT EMA+DE+K LR + + S+ + QL + GT+T+ +K
Sbjct: 259 PKAFA-------------EMTVMEMASDELKQLRALYTESSVQEHQLPQVINGTQTNKIK 305
Query: 189 CGKCKKRNCTYNQV 202
C +C+K +CT +
Sbjct: 306 CRRCEKFDCTVTMI 319
>gi|344242373|gb|EGV98476.1| hypothetical protein I79_017137 [Cricetulus griseus]
Length = 676
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 25/173 (14%)
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR K E+L +++ D + LA E+EE I+ + +YK +RS++ANL
Sbjct: 498 SVRSKGIELLYSALASSSTDYTKTHLWQNLAREIEEHIFTLHSSNIKKYKICIRSKVANL 557
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
+PKN L + + G +SA + A MT +MAN+E+K LR + + SI
Sbjct: 558 NNPKNSHLQQKLLSGTMSAREFA-------------EMTVLDMANEELKQLRASYTESSI 604
Query: 172 DDAQL-ATVQGTKTDLLKCGKCKKRNCTY-----------NQVQTRSADEPMT 212
+ L TV+GT+T+ +KC +C+K NC + VQ + DE MT
Sbjct: 605 QEHHLPQTVEGTQTNKIKCRRCEKYNCKITVIARGTLFLPSWVQNSNPDEQMT 657
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLE--ELATELEEAIY-NEFKN-TDNRYKNRV 104
L D VR C ++L NS+++G D G + + + A +E AI N+ K Y+N+V
Sbjct: 151 LNDKVRNACLKLLYNSLEIGK-DAHGWSDSQIFDAAVAVEAAILANQGKGAVTTEYRNKV 209
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS N+KD NP L + I A L TM+ E E+A+D+ K
Sbjct: 210 RSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNE-------------ELASDKRKREIE 256
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +++ A+ A Q +TD +CG+CK+R Y Q+QTRSADEPMTT
Sbjct: 257 QLQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTF 306
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 24 KEAKEEKKEDKKPSVTQYPPQKSHNL---TDSVRLKCREMLQNSI-----QVGDLDMDGL 75
K +KE + K P+ + P K ++ D VR K REML ++ + + D + +
Sbjct: 181 KVSKENQSSTKAPAKSPNAPPKLTSMLKCNDPVRDKIREMLVEALSRVHGESDEYDREKV 240
Query: 76 ASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
+ +A +E ++ + + K + RS + NL+D NP L R + G + KL
Sbjct: 241 NGCDPFRVAVSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKL 300
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
T++AE EMA+D+ K N+ ++ + + + TD KCG+C
Sbjct: 301 ITLSAE-------------EMASDKRKQENNQIKEKFLFNCEQGPAPKASTDQFKCGRCG 347
Query: 194 KRNCTYNQVQTRSADEPMTTLHHFYIT 220
+R CTY Q+QTRSADEPMTT Y+T
Sbjct: 348 QRKCTYYQMQTRSADEPMTT----YVT 370
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 13/99 (13%)
Query: 83 TELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
++EE I+ NTD +YKNRVRSRI+NLKD KNP L RN + GAI+ ++A MT+E
Sbjct: 1 AQIEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSE--- 57
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQG 181
EMA+DE+K +R KE+I + Q+A G
Sbjct: 58 ----------EMASDELKEIRKAMTKEAIREHQMARTGG 86
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 54 RLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFK-NTDNRYKNRVRSRIANLK 112
R C +M+ N++ + + D S+ +A E+E A YN+++ T YK R+RS NLK
Sbjct: 143 RDNCLKMMYNALAL--MVEDSPKSVMAVAREVELAAYNKYQPETSAPYKERMRSLFQNLK 200
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ NP L + + G I K TM++E E+ + E + + KE+++
Sbjct: 201 NKSNPGLRKRVLAGEIRPEKFVTMSSE-------------ELMSAERRAEAERLEKENMN 247
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A +A + + + L CGKC ++ +Y+Q QTRSADEPMTT
Sbjct: 248 KAMVAQAERSISTSLTCGKCGQKKVSYSQAQTRSADEPMTTF 289
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA-----SLEE---LATELEEAIYNEFKN 95
++ H TD V LK +G L +GLA S+EE LA E+E A + FK
Sbjct: 118 ERRHFKTDKVDLKRTGHQARDGCIGVL-YNGLAYRATESVEEVVRLAMEVEAAAFRVFKG 176
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
Y+ ++R + +LK NP L + GAI+ MT E+A
Sbjct: 177 DTPEYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMT-------------DVELA 223
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+D + K +E++ AQ+ + + +D LKCGKC ++ +Y+Q QTRSADEPMTT
Sbjct: 224 SDAQRAEDEKLQQENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTF 282
>gi|119615454|gb|EAW95048.1| transcription elongation factor A (SII), 3, isoform CRA_a [Homo
sapiens]
Length = 79
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
M + A+DE++ LRN +E+I + Q+A GT TDL +C KCKK+NCTYNQVQTRSAD
Sbjct: 1 MGSASTAHDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSAD 60
Query: 209 EPMTTL 214
EPMTT
Sbjct: 61 EPMTTF 66
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKN-TDNRYKNRVRS 106
D R KC E++ +S L +D A + + AT +E + + N T YK ++RS
Sbjct: 134 DKTRDKCIELIYDS-----LVLDSAAPSDLILKRATAIESTVLEDHNNDTGKEYKGKIRS 188
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
NLKD NP L N + G + +K M+++ EMA++E K
Sbjct: 189 LFLNLKDKNNPGLRANIVSGELEVAKFCRMSSQ-------------EMASEERKAADKAI 235
Query: 167 IKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E+ + A Q +TD +CGKCK+R Y Q QTRSADEPMTT
Sbjct: 236 QEENFYKSLGAEEQQAETDAFQCGKCKQRKTRYRQAQTRSADEPMTTF 283
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 26 AKEEK--KEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSI----QVGDLDM-DGL 75
AKEEK KK S + P K + DS R K RE+L++++ + D DM D +
Sbjct: 169 AKEEKPVSAAKKISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEV 228
Query: 76 ASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
+ + +A +E ++ + ++ K + RS + NLKD KNP R + G + +L
Sbjct: 229 NACDPIRVAVTVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRL 288
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
A M+ + EMA+++ K K ++++ D + TD KCG+C
Sbjct: 289 AVMS-------------SAEMASEQRKQENEKIEQKALFDCERGLQPKATTDQFKCGRCG 335
Query: 194 KRNCTYNQVQTRSADEPMTTLHHFYIT 220
+R TY Q+QTRSADEPMTT Y+T
Sbjct: 336 QRKTTYYQMQTRSADEPMTT----YVT 358
>gi|114687798|ref|XP_001135670.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan troglodytes]
Length = 381
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKAGLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 237 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 335
>gi|395526959|ref|XP_003765621.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sarcophilus harrisii]
Length = 352
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D R KC E+L ++ D ++LA E+E I+ + +YKN +RS+++N
Sbjct: 172 DPTRAKCVELLYGALVSYATDQQKTDHCQKLAKEIEGHIFALYSKNLKKYKNCIRSKLSN 231
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LK+ KN L +N GA+S + A MT EMANDE+K LR + K
Sbjct: 232 LKNQKNSHLQQNLFSGALSPKEFA-------------EMTVMEMANDELKQLRASYTKSC 278
Query: 171 IDDAQL-ATVQGTKTDLLKCGKCKKRNC 197
I + + GT+T+ +KC +C+K NC
Sbjct: 279 IQEHYFPQAIDGTQTNKIKCRRCEKFNC 306
>gi|297709429|ref|XP_002831433.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pongo abelii]
gi|297709431|ref|XP_002831434.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pongo abelii]
Length = 351
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFRDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+PKN L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLATV-QGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L V GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVTDGTQTNKIKCRRCEKYNC 305
>gi|114687800|ref|XP_001135750.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan troglodytes]
gi|114687802|ref|XP_520934.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan troglodytes]
Length = 351
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKAGLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|432109698|gb|ELK33774.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Myotis davidii]
Length = 352
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 28 EEKKEDKKPSVTQYPPQKSHNLTDS---VRLKCREMLQNSIQVGDLDMDGLASLEELATE 84
E K+ED K + Q+S L VR+KC E+L ++ + + A E
Sbjct: 146 ERKEEDVKGGDPKSTDQRSSELLPPAVPVRMKCTELLYEALTSSSTEQPKAELWQSFARE 205
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+EE ++ + +YK +RS++ANLK+P+N L RN + G +S + A
Sbjct: 206 IEEHVFTLYSKNLKKYKTCIRSKVANLKNPRNSHLQRNLLSGTMSPREFAE--------- 256
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATV-QGTKTDLLKCGKCKKRNC 197
MT +MA+ E+K LR+ + + I + L V +GT+T+ +KC C+K NC
Sbjct: 257 ----MTVMDMASKELKELRDSYTESGIQEHCLPQVMEGTQTEKIKCRHCEKFNC 306
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 21/150 (14%)
Query: 73 DGLASLEE--------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYI 124
DGLA + E +A ++E A Y + ++ YK ++RS NLK+ NP L +
Sbjct: 155 DGLAFMSEAMPDEILVIAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLRKRVF 214
Query: 125 FGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKT 184
G ISA + MT + EM +DE + +E+I+ A +A V+ +
Sbjct: 215 SGDISAKRFVVMTHD-------------EMKSDERRAEDKILEQENINQAMVAQVEKAIS 261
Query: 185 DLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+CGKCK++ +Y+Q QTRSADEPMTT
Sbjct: 262 KEFQCGKCKQKMVSYSQAQTRSADEPMTTF 291
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+PKN L +N + G +S + A MT
Sbjct: 237 EHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCGKYNC 335
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+PKN L +N + G +S + A MT
Sbjct: 207 EHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCGKYNC 305
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T +R KC E+L ++ D + A E+EE ++ + +YK +RS++A
Sbjct: 169 TTPMRTKCIELLYAALTSSSADQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVA 228
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+PKN L +N + G +S + A MT EMAN E+K LR + +
Sbjct: 229 NLKNPKNSHLQQNLLSGTMSPREFAEMTV-------------MEMANKELKQLRASYTES 275
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
I + L + GT+T+ +KC +C+K NC
Sbjct: 276 CIQEHYLPQVIDGTQTNKIKCRRCEKYNC 304
>gi|426395180|ref|XP_004063853.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Gorilla gorilla
gorilla]
Length = 381
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+PKN L +N + G S + A MT
Sbjct: 237 EHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 335
>gi|426395182|ref|XP_004063854.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Gorilla gorilla
gorilla]
gi|426395184|ref|XP_004063855.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Gorilla gorilla
gorilla]
Length = 351
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+PKN L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|74007121|ref|XP_537955.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Canis lupus familiaris]
Length = 348
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 18 DSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDS---VRLKCREMLQNSIQVGDLDMDG 74
++S+ + E KEE P T Q+S L D VR KC E+L ++ +
Sbjct: 135 ENSTSQTEPKEEHFRSGDPKSTA---QRSSELLDPMVPVRAKCTELLYEALTSPFTEQPK 191
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
A E+EE I+ +YK VRS++ANL++PKN L +N + G +S + A
Sbjct: 192 ADLWRNFAREIEEHIFTLHSKNLKKYKTCVRSKVANLRNPKNSHLQQNLLSGTMSPREFA 251
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCK 193
MT EMAN E+K LR + + I + L ++GT T +KC +C+
Sbjct: 252 KMTV-------------MEMANKELKQLRASYTESCIQEHHLPQAIEGTHTRKIKCRRCE 298
Query: 194 KRNC 197
K NC
Sbjct: 299 KFNC 302
>gi|444509110|gb|ELV09184.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Tupaia chinensis]
Length = 351
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T VR KC E+L ++ +D + + LA E+EE +Y +YK +RS++A
Sbjct: 170 TMPVRTKCTELLYTALSNSSIDQPKASLWQNLAREIEEHVYTLHSKNLKKYKTCIRSKVA 229
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+PKN L +N + G +S + A M EMA+ E+K LR + +
Sbjct: 230 NLKNPKNSHLQQNLLSGTMSPREFAKMNV-------------MEMASQELKQLRASYTES 276
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
I + L T+ GT T+ +KC +C+ NC
Sbjct: 277 CIQEHCLPQTIDGTPTNKIKCRRCENYNC 305
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 77 SLEELATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
++ E A +E + K N+ N Y+ ++RS N+KD NP L + G ++ K+
Sbjct: 180 TIAERAIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVR 239
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKR 195
M+ E EMA++ ++ L K ++++ A+ V +TD KC +C++R
Sbjct: 240 MSKE-------------EMASESVRLLNEKLAEKNLFKAKAVGVTQAETDAFKCSRCQQR 286
Query: 196 NCTYNQVQTRSADEPMTT 213
CTY Q+QTRSADEPMT
Sbjct: 287 KCTYYQMQTRSADEPMTV 304
>gi|154146187|ref|NP_689847.2| transcription elongation factor A N-terminal and central
domain-containing protein [Homo sapiens]
Length = 381
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 237 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 335
>gi|21756669|dbj|BAC04930.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 14 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 73
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 74 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 125
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 126 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 172
>gi|119619230|gb|EAW98824.1| hCG2043271, isoform CRA_a [Homo sapiens]
Length = 230
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 14 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 73
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 74 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 125
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 126 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 172
>gi|117949797|sp|Q8N8B7.2|TEANC_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
Length = 351
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D+ R KC E++ ++ L D A E++ A +E A + YK ++R+
Sbjct: 142 DATRDKCLELIYDA-----LAFDSGAPSEQILGKAKAIEAAALTDNGGVTAAYKAKIRTL 196
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP L + + G + ++ MT+ EMA++E K N+
Sbjct: 197 FVNLKDKNNPGLRESVVAGDLPVTRFC-------------KMTSAEMASEERKAADNRIR 243
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ A +TD +CG+CK+R C Y Q QTRSADEPMTT
Sbjct: 244 EENLFKTLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTF 290
>gi|397468106|ref|XP_003805736.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan paniscus]
Length = 381
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 237 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 335
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATE 84
EA E +D P+ + S + SVR K +L ++ D + ++LA E
Sbjct: 155 EALEPPSDDPFPTAGE--SSWSQDPVISVRHKAVGLLHGALTDSSSDQSKVDQGQKLARE 212
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+EE IY + T +YKN +RS+++NL++PKN L +N G+++ A MT
Sbjct: 213 IEEHIYALYSKTIKKYKNCIRSKVSNLRNPKNVHLQQNLFSGSLTPEAFAEMTV------ 266
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATV-QGTKTDLLKCGKCKKRNCTYNQV 202
+MA+DE+K LR + + + + L V +GT+T+ +KC +C+K +C +
Sbjct: 267 -------MDMASDELKRLRASYTETCVQEHHLPQVPEGTQTNKVKCRRCEKSDCKVTMI 318
>gi|119619229|gb|EAW98823.1| hCG1798824 [Homo sapiens]
Length = 351
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|397468108|ref|XP_003805737.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan paniscus]
gi|397468110|ref|XP_003805738.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan paniscus]
Length = 351
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRSSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
+R KC E+L ++ D + A E+EE ++ + +YK +RS++ANLK
Sbjct: 202 MRTKCIELLYAALTSSSADQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLK 261
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+PKN L +N + G +S + A MT EMAN E+K LR + + I
Sbjct: 262 NPKNSHLQQNLLSGTMSPREFAE-------------MTVMEMANKELKQLRASYTESCIQ 308
Query: 173 DAQLA-TVQGTKTDLLKCGKCKKRNC 197
+ L + GT+T+ +KC +C+K NC
Sbjct: 309 EHYLPQVIDGTQTNKIKCRRCEKYNC 334
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 25/174 (14%)
Query: 49 LTDSVRLKCREMLQNSIQV----GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
+ D+ R + RE+ +++ + G ++ L + ++E ++ ++ + YK +V
Sbjct: 4 VNDAARDRTREIFADALALCVTDGKIESVDAKKLASIVDQIENSMTAKWPSGGKDYKAKV 63
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
R NLKD KNP L N G ISA L ++ E E+ ++E + N
Sbjct: 64 RQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPE-------------ELGSNERRNA-N 109
Query: 165 KFIKESIDDAQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ I+E A+ V+G + TD KCGKCK+R CTY Q+QTRSADEPMTT
Sbjct: 110 ERIREL---AEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTF 160
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 14/111 (12%)
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
VRS+ NLKD NP+L R G IS S+ MT+E EM ++ +K
Sbjct: 148 VRSKCLNLKDKNNPVLCRRVYDGDISPSRYVDMTSE-------------EMKSENLKNEE 194
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K I++S+ + Q+ T Q +TD+ KC KC +R C+Y Q+QTRS DEPMTT
Sbjct: 195 VKMIEDSLYECQIPT-QKAETDMFKCSKCGERKCSYRQLQTRSGDEPMTTF 244
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
L+S E++ATE+E +Y+ +K YKN+VRS NL+ N L + + ++ K
Sbjct: 173 LSSPEDVATEVEAELYSIYKGLTADYKNKVRSFKFNLQS--NDGLRDSLLNRILTIEKFC 230
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
+M MA+DE+K R K K + + + T TD +CGKCK+
Sbjct: 231 SMDV-------------MSMASDELKEERRKLDKFQTEASMIGTNNEATTDQFQCGKCKQ 277
Query: 195 RNCTYNQVQTRSADEPMTTL 214
R CTY Q+QTRSADEPMTT
Sbjct: 278 RRCTYFQMQTRSADEPMTTF 297
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
+R KC E+L ++ D + A E+EE ++ + +YK +RS++ANLK
Sbjct: 172 MRTKCIELLYAALTSSSADQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLK 231
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+PKN L +N + G +S + A MT EMAN E+K LR + + I
Sbjct: 232 NPKNSHLQQNLLSGTMSPREFAEMTV-------------MEMANKELKQLRASYTESCIQ 278
Query: 173 DAQLA-TVQGTKTDLLKCGKCKKRNC 197
+ L + GT+T+ +KC +C+K NC
Sbjct: 279 EHYLPQVIDGTQTNKIKCRRCEKYNC 304
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
+R KC E+L ++ D + A E+EE ++ + +YK +RS++ANLK
Sbjct: 172 MRTKCIELLYAALTSSSADQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLK 231
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+PKN L +N + G +S + A MT EMAN E+K LR + + I
Sbjct: 232 NPKNSHLQQNLLSGTMSPREFAEMTV-------------MEMANKELKQLRASYTESCIQ 278
Query: 173 DAQLA-TVQGTKTDLLKCGKCKKRNC 197
+ L + GT+T+ +KC +C+K NC
Sbjct: 279 EHYLPQVIDGTQTNKIKCRRCEKYNC 304
>gi|348554565|ref|XP_003463096.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cavia porcellus]
Length = 352
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 20 SSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE 79
S+ + KEE P T + + T R KC E+L ++ D +
Sbjct: 141 STNHMDPKEEHFGGGDPKPTGSGSDELQDPTMPTRTKCIELLYTALTSSFTDQANADLWQ 200
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
A E+EE I+ + +YK +RS++ANLK+P+N L +N + G IS + A
Sbjct: 201 NFAREIEECIFALYSKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSGTISPKEFAE---- 256
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
MTT +MAN E+K LR F + I + L + GT T+ ++C +C++ NC
Sbjct: 257 ---------MTTMDMANKELKQLRAAFTESCIQEHYLPQVIDGTPTNKIRCRRCERYNC 306
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 14/137 (10%)
Query: 77 SLEELATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
++ E A +E + K N+ N Y+ ++RS N+KD NP L + G ++ K+
Sbjct: 173 TIAERAIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVR 232
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKR 195
M+ E EMA++ ++ L K ++++ A+ V +TD KC +C++R
Sbjct: 233 MSKE-------------EMASESVRLLNEKLAEKNLFKAKAVGVTQAETDAFKCSRCQQR 279
Query: 196 NCTYNQVQTRSADEPMT 212
CTY Q+QTRSADEPMT
Sbjct: 280 KCTYYQMQTRSADEPMT 296
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
G+ + + SL + E+E+A+ ++K+ YK ++R N+KDPKNP L R
Sbjct: 185 GNCEDISVTSLARIVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKRE 244
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK---- 183
I A+ L +++E E+ +DE + N+ I+E A+ V+G +
Sbjct: 245 IDATTLIDLSSE-------------ELGSDERRAA-NQSIREH---AEAEAVRGQRKEAS 287
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
T KCGKC +R CT+ Q+QTRSADEPMTT
Sbjct: 288 TTAFKCGKCGQRACTFYQLQTRSADEPMTTF 318
>gi|351702318|gb|EHB05237.1| Transcription elongation factor A and central domain-containing
protein [Heterocephalus glaber]
Length = 353
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T +R KC E+L +++ D + A E+EE I+ + +YK +RS++A
Sbjct: 172 TVPMRTKCIELLYSALTSYSTDQANADLWQNFAREIEEHIFTLYSKNIKKYKTCIRSKVA 231
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P+N L +N + +S + A MTA EMAN E+K LR + +
Sbjct: 232 NLKNPRNCHLQQNLLSRTMSPKEFAEMTA-------------MEMANKELKQLRAAYTQS 278
Query: 170 SIDDAQLATV-QGTKTDLLKCGKCKKRNC 197
I D L V GT+T+ +KC +C+K NC
Sbjct: 279 CIQDHYLPQVTDGTQTNKIKCRRCEKYNC 307
>gi|189054986|dbj|BAG37970.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRLSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|194377496|dbj|BAG57696.1| unnamed protein product [Homo sapiens]
Length = 381
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 177 KEEHFGDGDPESTGKRLSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 236
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 237 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 288
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 289 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 335
>gi|410926740|ref|XP_003976831.1| PREDICTED: transcription elongation factor A protein 2-like,
partial [Takifugu rubripes]
Length = 167
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 38/164 (23%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
D+VR KCRE+L ++Q G + + LA ++EE I + + N
Sbjct: 31 DNVRNKCRELLVAALQTGGDHLTMGVDCQHLAAQIEEDI--------------LLTNXKN 76
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
L P + + P +T EMA+ E+K +R KES
Sbjct: 77 LGFPTQXXFXKLF------------------------PASTQEMASAELKQIREALTKES 112
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + QL+ V GT+TD+ C C ++C+Y QVQ RSADEPMTT
Sbjct: 113 IREHQLSKVGGTETDMFICNNCHGKSCSYTQVQIRSADEPMTTF 156
>gi|158255978|dbj|BAF83960.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
KEE D P T + + T +R KC E+L ++ D + A E+E
Sbjct: 147 KEEHFGDGDPESTGKRLSELLDPTTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIE 206
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
E ++ + +YK +RS++ANLK+P+N L +N + G S + A MT
Sbjct: 207 EHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTV-------- 258
Query: 147 EPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
EMAN E+K LR + + I + L + GT+T+ +KC +C+K NC
Sbjct: 259 -----MEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNC 305
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A+E+E ++ +E+ ++ Y+N++RS NL++ KNP L + I+AS+ MT
Sbjct: 166 IASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMTPN 225
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 226 -------------EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 272
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 273 YQMQTRSADEPLTTF 287
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 14/143 (9%)
Query: 73 DGLASLEELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
D + ++ATE+E ++ +++ D+ Y+N++RS NL++ KNP L + I+A+
Sbjct: 170 DSSQHILKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAA 229
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
MT + EMA + +K K K+++ DAQ AT + TD CGK
Sbjct: 230 AFIKMTPK-------------EMAPEALKLEIEKLHKQNLFDAQGATEKRAVTDRFTCGK 276
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
CK + +Y Q+QTRSADEP+TT
Sbjct: 277 CKHKKVSYYQMQTRSADEPLTTF 299
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A +E A + F T +YK ++RS NLK+ NP L + + G ++ K MT +
Sbjct: 164 AIAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHD- 222
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + L K KE++D A +A + + + L+CGKC +R TY
Sbjct: 223 ------------ELKSDERRALDQKIQKENMDKAMVAQAERSISSSLQCGKCGQRKVTYT 270
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 271 EAQTRSADEPMT 282
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A+E+E ++ +E+ ++ Y+N++RS NL++ KNP L + I+AS+ MT
Sbjct: 166 IASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMTPN 225
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 226 -------------EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 272
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 273 YQMQTRSADEPLTTF 287
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 18/170 (10%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLE--ELATELEEAIY-NEFKNTDNR-YKNRV 104
L D VR C ++L ++++G + G + + + A +E AI N+ K + Y+N+V
Sbjct: 153 LQDKVRNACLKLLYQALEIGK-EQHGHSDSQVFDAAVAVEAAILANQGKGSVTADYRNKV 211
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS N+KD NP L + I+A KL TMT E E+A+D+ K
Sbjct: 212 RSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNE-------------ELASDKRKREIE 258
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +++ A+ A Q +TD +CG+CK+R Y Q+QTRSADEPMTT
Sbjct: 259 ELQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTF 308
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YK +VR N++DPKNP L N G ISA L +T E E+ ++E
Sbjct: 12 YKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPE-------------ELGSNER 58
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ K + + +A Q TD KCGKCK+R CTY Q+QTRSADEPMTT
Sbjct: 59 RQANEKIREFAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTF 113
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGLASLE---ELATELEEAIYNEFK-NTDNRYKNRV 104
L D R C +L N++ D A E E A +E + ++ +T YK +V
Sbjct: 118 LNDKTRDTCLSLLYNAMV-----FDSSAPSELVMERALSIESTVLDDNNGSTGEEYKKKV 172
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS + NLKD KNP L I G A+ M+ SAD MA++E K
Sbjct: 173 RSLMLNLKDKKNPSLREAVISGDTPAATFCRMS------SAD-------MASEERKQQDR 219
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++ A+ A Q +TD KCG+CK+R CTY Q+QTRSADEPMTT
Sbjct: 220 ALELSNLFKARGAGPQQAETDSFKCGRCKQRKCTYYQMQTRSADEPMTTF 269
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 34/224 (15%)
Query: 12 GISNNKDSSSKKKEAKEEKK-----EDKKPSVTQYPPQKSHN---------LTDSVRLKC 57
G S S S+ + K EK+ E K+ S + PPQ S+ D++R K
Sbjct: 144 GSSTKPGSVSRSETIKVEKRVENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRDKV 203
Query: 58 REMLQNSI----QVGDLDM-DGLASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
RE+L ++ D D+ D + + + +A +E ++ + ++ K + RS + N
Sbjct: 204 RELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFN 263
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
+KDP NP L R + G + +L M+ E EMA+++ + ++ +++
Sbjct: 264 IKDPNNPDLRRKVLLGEVKPDRLINMSPE-------------EMASNQRQRENSQIKEKA 310
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ D + TD KCG+C +R TY Q+QTRSADEPMTT
Sbjct: 311 LFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 36/226 (15%)
Query: 12 GISNNKDSSSKKKEAKE--EKK-----EDKKPSVTQYPPQKSHN---------LTDSVRL 55
G+ NN + ++K E EK+ E K+ S + PPQ S+ D++R
Sbjct: 97 GLDNNGSAKAEKASKVETVEKRVENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRD 156
Query: 56 KCREMLQNSI----QVGDLDM-DGLASLE--ELATELEEAIYNEFKNTDNRYKNRVRSRI 108
K RE+L ++ D D+ D + + + +A +E ++ + ++ K + RS +
Sbjct: 157 KVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIM 216
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
N+KDP NP L R + G + +L M+ E EMA+++ + ++ +
Sbjct: 217 FNIKDPNNPDLRRKVLLGEVKPDRLINMSPE-------------EMASNQRQRENSQIKE 263
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+++ D + TD KCG+C +R TY Q+QTRSADEPMTT
Sbjct: 264 KALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 309
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D R C E++ N L A + ++ A +E A Y FK Y+ ++RS
Sbjct: 141 DETRDSCIELIYNG-----LAYRSTAPINDVLTKAVAVEYAAYIHFKGVTKEYREKLRSL 195
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+NLK N L N + G I+ + MT E E+ +DE + +
Sbjct: 196 FSNLKVKSNRQLGINVMEGKITPERFVVMTHE-------------ELKSDEQRKKEDALQ 242
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ AQ+ + + +D LKCGKC ++ +Y+Q QTRSADEPMTT
Sbjct: 243 QENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTF 289
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 21/169 (12%)
Query: 51 DSVRLKCREMLQNSIQVG-DLDMDGLASLEELATELEEAIYN--EFKNTDNR--YKNRVR 105
D+ R C ++ + + +G DL M + +LA E+E A N E K + + YK+++R
Sbjct: 141 DTARNNCIGLMYDGLCLGSDLPMK---QILDLAKEIESAALNLPEAKGSSSSPVYKDKIR 197
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNK 165
S NLK+ NP L + + G ++A + +MT E EM + + + K
Sbjct: 198 SLYQNLKNKSNPGLRKRILSGEVTAVRFVSMTHE-------------EMKSKQQREEEIK 244
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE++++A +A + + + L+CGKC ++ +Y+Q QTRSADEPMTT
Sbjct: 245 IAKENMNNAMVAQEEKSVSTSLECGKCHQKKVSYSQAQTRSADEPMTTF 293
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR +C ++ N + ++ + +S+ A +E A Y F YK ++RS ANLK
Sbjct: 150 VRNQCIGLIYNGLAYRSVEPE--SSVIAKAVAVENAAYTVFNGEGAEYKKKIRSLFANLK 207
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ N L + + G I+ + +MT E ++ +++ + + + KE++
Sbjct: 208 NKSNRDLGKRVMSGDIAPERFVSMTDE-------------DLKSEDQRRMELELEKENMK 254
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQ+ + + +D L+CGKCKK+ +Y Q QTRSADEPMTT
Sbjct: 255 KAQVPMAEKSISDSLECGKCKKKRVSYTQAQTRSADEPMTTF 296
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 51 DSVRLKCREMLQNSIQV--GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRI 108
D R KC E+L +++ G + L L+ + +E +Y EF Y ++R
Sbjct: 170 DKTRDKCMELLYDAMASDSGARESTHLIILKRVYA-IEYQVYKEFDGVTKEYSTKMRRLF 228
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NLKD KNP L + G ISA K MT E EMA++E K + +
Sbjct: 229 NNLKDKKNPGLREAVVSGDISAEKFVKMTPE-------------EMASEERKQQNSALNE 275
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
++ A A +TD +CG+CK Y Q QTRSADEPMT + +
Sbjct: 276 ANVHAALGAGEPEAETDAFQCGRCKNFKTRYRQAQTRSADEPMTLTFNIF 325
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A E+E A++ NE+ + Y+N++R+ + L++ KNP L + I+A + M+
Sbjct: 188 VAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMSPN 247
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA +E+K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 248 -------------EMAPEELKKEIEKMHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 294
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 295 YQMQTRSADEPLTTF 309
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E++A E+E +Y+ ++ YK ++RS NLK KN +L + + IS +K +M
Sbjct: 184 EDIAVEIEAEMYDIYRGVSKEYKEKLRSFKFNLK--KNDILRLSLLNRQISVAKFCSMD- 240
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
+ MA+D++K R K K + + + L TD +CGKCK+R CT
Sbjct: 241 ------------IYSMASDDLKEERKKLDKFNTEASMLGQNNEATTDQFQCGKCKQRKCT 288
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRSADEP TT
Sbjct: 289 YTQLQTRSADEPPTTF 304
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E A Y +FK YK ++RS NLK+ N L R+ + G I+A K MT +
Sbjct: 175 AVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIMTDD-- 232
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ ++E + + KE++ AQ+ + + ++ L+CG+CKK+ +Y Q
Sbjct: 233 -----------ELKSEEQRKKELELEKENMKKAQVPMAEKSISESLECGRCKKKQVSYTQ 281
Query: 202 VQTRSADEPMTTL 214
QTR+ADEPMTT
Sbjct: 282 AQTRAADEPMTTF 294
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
+RS+ NLKD NP+L R G IS S+ MT+E EM ++ ++
Sbjct: 145 IRSKCLNLKDKNNPVLCRRVYDGEISPSRYVDMTSE-------------EMKSESLRNEE 191
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K I+ S+ + Q+ T Q +TD+ KC KC +R C+Y Q+QTRS DEPMTT
Sbjct: 192 VKMIEVSLYECQIPT-QKAETDMFKCNKCGERKCSYRQLQTRSGDEPMTTF 241
>gi|344288715|ref|XP_003416092.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Loxodonta africana]
Length = 353
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T +R K E+L ++ D+ ++ A E+EE I+ + +YK +RS+++
Sbjct: 172 TTPLRTKSIELLYKALTSSSTDLPKADLWQKFAREIEEHIFALYSGNLKKYKTCIRSKVS 231
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P+N L +N + G +S + A MT EMAN E+K LR + +
Sbjct: 232 NLKNPRNSHLQQNLLSGTMSPREFAA-------------MTVLEMANQELKDLRAAYTES 278
Query: 170 SIDDAQLAT-VQGTKTDLLKCGKCKKRNC 197
SI + +L + GT T+ +KC +C+K NC
Sbjct: 279 SIQEHRLPQELDGTPTNKIKCRRCEKYNC 307
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D R KC E++ ++ L D A E + A ++E+ + + + YK ++RS
Sbjct: 139 DKTRDKCAELIYDA-----LVFDSGAPSELILSRAKDIEKTVLADNGGANANYKAKIRSL 193
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLKD NP L I G + SKL M+ SAD MA++E K K
Sbjct: 194 FVNLKDKNNPGLRECVISGELPVSKLCKMS------SAD-------MASEERKAADAKIK 240
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+E++ A Q +TD +C +CK+R C Y Q QTRSADEPMTT
Sbjct: 241 EENLFKTLGAGEQEAETDAFQCPRCKQRKCRYRQQQTRSADEPMTTF 287
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Query: 82 ATELEEAIYNEFKNTDNR-YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A +E A++ EFK + YK ++RS ANLK N L + + G IS K A MT E
Sbjct: 167 AVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAKMTDE- 225
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
+ +S D+ E+ + MK AQ+ + + +D L+CG+CK + +Y
Sbjct: 226 ELKSEDQRKKEIELEKENMKR------------AQVPMAEKSISDSLECGRCKMKKVSYT 273
Query: 201 QVQTRSADEPMTTL 214
Q QTRSADEPMTT
Sbjct: 274 QAQTRSADEPMTTF 287
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
DSVR C E+L N + +A + A +E A ++ FK YK +VRS +N
Sbjct: 139 DSVRDACIELLYNGLAY--RSTASVADVLAKAVAVEAAAFSHFKGVGAPYKEKVRSLFSN 196
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LK N L N + G I+ + MT E E+ + E + N +E+
Sbjct: 197 LKVKTNKELGVNVMEGKITPDRFVAMTQE-------------ELKSAEQRKKENLLQEEN 243
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ AQ+ + + +D L CGKCK++ +Y+Q QTRSADEPMTT
Sbjct: 244 MKKAQVPMAEKSISDALTCGKCKQKKVSYSQAQTRSADEPMTTF 287
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 80 ELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++A+E+E ++ +E+ + Y+N++RS NL++ KNP L + AI A+ MT
Sbjct: 161 KIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNPELRERLLTQAILAANFIKMTP 220
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
EMA + +K K K+++ DAQ AT + TD CGKCK + +
Sbjct: 221 S-------------EMAPESLKKEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVS 267
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRSADEP+TT
Sbjct: 268 YYQMQTRSADEPLTTF 283
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 18/166 (10%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLE-ELATELE-EAIYNEFKNTDNRYKNRVRSRI 108
D +R C ++ N++ + D D +SL A E++ + + T + Y+NR+RS
Sbjct: 131 DKIRNNCIGLMYNALVI---DSDESSSLIIAKAKEIDAQVLARAAGKTGSEYRNRMRSLY 187
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NLKD NP L + + I+ +L+TMT + E+A+++ + K +
Sbjct: 188 MNLKDKNNPKLRASVLRNEITPQRLSTMT-------------SAELASEDRRKEDAKLEQ 234
Query: 169 ESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E++ AQ A Q TDL CGKCK++ +Y Q+QTRSADEPMTT
Sbjct: 235 ENLFHAQGAKPQKAVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTF 280
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E A+++ + ++ + + RS I N +D KNP R + G + ++A +++E
Sbjct: 197 VAVAVESALFSNWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSE- 255
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA+DE + +NK IKE ++ QLA TD KCG+C +R +Y
Sbjct: 256 ------------EMASDERRK-KNKEIKEKALLVCQLAGAPKATTDQFKCGRCGQRKTSY 302
Query: 200 NQVQTRSADEPMTTLHHFYIT 220
Q+QTRSADEPMTT Y+T
Sbjct: 303 YQMQTRSADEPMTT----YVT 319
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 49 LTDSVRLKCREMLQNSIQVGDLDMDGL--ASLEELATELEEAIY-NEFKNTDNR-YKNRV 104
L D VR C ++L S+++ + + G + + + A +E AI N+ K + Y+N+V
Sbjct: 149 LNDKVRNACLKLLYQSLEI-NKEQRGFNDSQVFDAAVAVEAAILANQGKGSVTADYRNKV 207
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS N+KD NP L I I A KL TMT E E+A+D+ K
Sbjct: 208 RSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNE-------------ELASDKRKREIE 254
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +++ A+ A Q +TD +CG+CK+R Y Q+QTRSADEPMTT
Sbjct: 255 ELQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTF 304
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A E+E ++ +E+ N ++ Y+N++R+ NL++ KNP L + G I ++ M+
Sbjct: 160 VAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMSPN 219
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 220 -------------EMAPEALKKEIEKLHKKNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 266
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 267 YQMQTRSADEPLTTF 281
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 22/180 (12%)
Query: 43 PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA--SLEE------LATELEEAIYNEFK 94
P+K TD V +K E + +G L +GLA S+E A +E A + K
Sbjct: 127 PEKRKFDTDGVSIKRTESNVRNQCIG-LIYNGLAYRSIESETDVIARAVAVEHAAFTTLK 185
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
YK ++RS NLK+ N L + + G IS K MT E E+
Sbjct: 186 GETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNMTDE-------------EL 232
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+++ + + + KE++ AQ+ + + +D L+CGKCKK+ +Y Q QTRSADEPMTT
Sbjct: 233 KSEDQRKMELELEKENMKKAQVPMAEKSISDSLECGKCKKKRVSYTQAQTRSADEPMTTF 292
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 24 KEAKEEK--KEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLA 76
K AKEEK KK S + P K + D+ R K RE+L ++ G+ D D +
Sbjct: 166 KIAKEEKPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVD 225
Query: 77 SLE-----ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+ +A +E ++ ++ ++ K + RS + NLKD NP R + G I
Sbjct: 226 VVNNSDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPE 285
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+L M+ T EMA+++ K K ++++ + + TD KCG+
Sbjct: 286 QLINMS-------------TAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGR 332
Query: 192 CKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
C +R TY Q+QTRSADEPMTT Y+T
Sbjct: 333 CGQRKTTYYQMQTRSADEPMTT----YVT 357
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEEL---ATELEEAIYNEFKNTDNRYKNRVRSR 107
D R C E++ N L AS+ ++ A +E A ++ +K Y+ ++RS
Sbjct: 141 DETRDSCIELIYNG-----LAYRSTASVTDVLAKAVAVEHAAFSHYKGVTKEYREKLRSL 195
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
+NLK N L N + G I+ + MT E E+ ++E + +
Sbjct: 196 FSNLKVKSNRQLGVNVMEGKIAPERFVVMTHE-------------ELKSEEQRKKEDALQ 242
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
E++ AQ+ + + +D LKCGKC ++ +Y+Q QTRSADEPMTT
Sbjct: 243 LENMKKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTF 289
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 82 ATELEEAIYNE-FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A L + I NE F+ VRS+ NLKD NP+L R G IS S+ MT+E
Sbjct: 121 AALLAKQITNEIFERNSADIAKLVRSKCLNLKDKNNPVLCRMVYDGEISPSRYVDMTSE- 179
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
EM ++ ++ K I+ S+ + Q+ T Q +TD+ KC +C +R C+Y
Sbjct: 180 ------------EMKSESLRNEEVKMIEVSLYECQIPT-QKAETDMFKCNRCGERKCSYR 226
Query: 201 QVQTRSADEPMTTL 214
Q+QTRS DEPMTT
Sbjct: 227 QLQTRSGDEPMTTF 240
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 27/185 (14%)
Query: 40 QYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDM--DGLA-----SLEEL---ATELEEAI 89
Q P+K H D+V + N + G + + +GLA S+EE+ A E+E A
Sbjct: 113 QGDPEKRHFKVDNVDIA---RTGNKARDGSIGVLYNGLAYRATESIEEVLQRAMEVEAAA 169
Query: 90 YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
+ +K+T Y++++R + +LK NP L R + G I+ K MT +
Sbjct: 170 FAVYKDTPE-YRSKIRGLMTSLKRKDNPELGRRVLGGEITPEKFVVMTDD---------- 218
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
E+A++ + + +E++ AQ+ Q + +D L+C KCK++ +Y+Q QTRSADE
Sbjct: 219 ---ELASEAQRARDRELERENMLKAQVPMAQKSISDSLQCNKCKQKKVSYSQAQTRSADE 275
Query: 210 PMTTL 214
PMTT
Sbjct: 276 PMTTF 280
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 24 KEAKEEK--KEDKKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQ--VGDLDMDGLA 76
K AKEEK KK S + P K + D+ R K RE+L ++ G+ D D +
Sbjct: 166 KIAKEEKPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVD 225
Query: 77 SLE-----ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+ +A +E ++ ++ ++ K + RS + NLKD NP R + G I
Sbjct: 226 VVNNSDPIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPE 285
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+L M+ T EMA+++ K K ++++ + + TD KCG+
Sbjct: 286 QLINMS-------------TAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGR 332
Query: 192 CKKRNCTYNQVQTRSADEPMTT 213
C +R TY Q+QTRSADEPMTT
Sbjct: 333 CGQRKTTYYQMQTRSADEPMTT 354
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 82 ATELEEAIYN--EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
A +EEA + +++ Y+N++RS NLK +NP L + + G ISA KL TM++
Sbjct: 146 AIAVEEAAFTICGKGESNSDYRNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSS 205
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
+MA++E K +E++ + A Q +TD +CGKCK+R Y
Sbjct: 206 -------------DMASEERKQKDKAIEEENLFKSLGAGEQQAETDAFQCGKCKQRKTIY 252
Query: 200 NQVQTRSADEPMTTL 214
Q QTRSADEPMTT
Sbjct: 253 RQAQTRSADEPMTTF 267
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D NP L R + G IS KL T++AE EMA+D+ K N+ ++
Sbjct: 3 NLRDGNNPDLRRRVLTGEISPEKLITLSAE-------------EMASDKRKQENNQIKEK 49
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYITV 221
++ D + TD KCG+C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 50 ALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTT----YVTC 97
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 14/136 (10%)
Query: 80 ELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++A +E ++ E+ ++ Y+N++R+ NL++ KNP L + G I+ SK TM
Sbjct: 78 DVARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNP 137
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
EMA + +K K K+++ DAQ AT + TD CGKCK + +
Sbjct: 138 N-------------EMAPESLKQEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVS 184
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRSADEP+TT
Sbjct: 185 YYQMQTRSADEPLTTF 200
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 74/136 (54%), Gaps = 14/136 (10%)
Query: 80 ELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++A +E ++ E+ ++ Y+N++R+ NL++ KNP L + G I+ SK TM
Sbjct: 78 DVARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNP 137
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
EMA + +K K K+++ DAQ AT + TD CGKCK + +
Sbjct: 138 N-------------EMAPESLKQEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVS 184
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRSADEP+TT
Sbjct: 185 YYQMQTRSADEPLTTF 200
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA-----SLEEL---ATELEEAIYNEFKN 95
+K H TD V + + +G L +GLA S+EE+ A E+E A++ K
Sbjct: 121 EKRHFKTDKVDINRTSSQTRNNTIGVL-YNGLAYRRTESIEEVVKRAVEVENALFKACKG 179
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
+ Y+++ R+ +LK N L R + G + +L ++ + E+A
Sbjct: 180 ENQEYRSKARTLFTSLKRKDNAALGRRVMSGELPVDRLVVLSDK-------------ELA 226
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++E + + KE++ AQ+ + + +D LKCGKC +R +Y+Q QTRSADEPMTT
Sbjct: 227 SEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 27/182 (14%)
Query: 43 PQKSHNLTDSVRLKCREMLQNSIQVGDLDM--DGLA-----SLEEL---ATELEEAIYNE 92
P+K H D V + N + G + + +GLA S+EE+ E+E A Y
Sbjct: 130 PEKRHFRVDKVDI---SRTGNKTRDGSIGVLYNGLAYRATESIEEVLQRTMEVEAAAYAA 186
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
+ +T N Y+ ++R + +LK NP L R + G I+ K A MT E
Sbjct: 187 YGDT-NEYRAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDE------------- 232
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
E+A+D + +E++ AQ+ Q + +D L+CGKCK++ +Y+Q QTRSADEPMT
Sbjct: 233 ELASDAQRERDAALERENMLKAQVPMAQRSISDSLQCGKCKQKKVSYSQAQTRSADEPMT 292
Query: 213 TL 214
T
Sbjct: 293 TF 294
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
+RS+ NLKD NP L R G IS S+ M++E EM ++ +K
Sbjct: 149 IRSKCLNLKDKNNPALCRRVYNGDISPSRYVDMSSE-------------EMKSESLKNEE 195
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K I+ S+ + Q+ T Q +TD+ KC KC +R C+Y Q+QTRS DEPMTT
Sbjct: 196 VKMIEVSLYECQIPT-QKAETDIFKCSKCGERKCSYRQLQTRSGDEPMTTF 245
>gi|389637312|ref|XP_003716294.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
gi|351642113|gb|EHA49975.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
Length = 304
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
+ E+E+A + +K Y+N++RS +NLK ++ L++ G I+ASK MT++
Sbjct: 174 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKSNRD--LAKGVFSGNIAASKFVVMTSD-- 229
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ +++++ + KE++ AQ+ + + +D L+C KCK++ +Y Q
Sbjct: 230 -----------ELKSNDLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQ 278
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 279 AQTRSADEPMTTF 291
>gi|440467322|gb|ELQ36551.1| transcription elongation factor S-II [Magnaporthe oryzae Y34]
Length = 306
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
+ E+E+A + +K Y+N++RS +NLK ++ L++ G I+ASK MT++
Sbjct: 174 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKSNRD--LAKGVFSGNIAASKFVVMTSD-- 229
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ +++++ + KE++ AQ+ + + +D L+C KCK++ +Y Q
Sbjct: 230 -----------ELKSNDLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQ 278
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 279 AQTRSADEPMTTF 291
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 25/202 (12%)
Query: 10 PPGISNNKDS-----SSKKKEAKEEKKEDKKPSVTQYPPQKSHNLT---DSVRLKCREML 61
P +S+ K++ S++ + E + S+ P K+H D+VR KC ++L
Sbjct: 97 PASVSSPKEAVGGAVSAQTCDGGEGNAAGEPSSMQAKPGPKAHTSAASPDNVRTKCVQLL 156
Query: 62 QNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSR 121
++ D D A ELA ++E ++ + +YK VRS++ANL++PK+ L +
Sbjct: 157 LAALCPSAPDQDKAA---ELARDIERHVHELHNHNQVKYKACVRSKVANLRNPKSGHLHQ 213
Query: 122 NYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQ 180
+ G++S A M+AE +MA+ E++ LR ++ + + + QL ++
Sbjct: 214 GLLSGSLSPEAFARMSAE-------------DMASAELRQLREEYSSQGVSERQLPQGIE 260
Query: 181 GTKTDLLKCGKCKKRNCTYNQV 202
GT+T+ ++C +C +C QV
Sbjct: 261 GTRTEKIRCKRCGGSDCRVTQV 282
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR +C E+L ++ LA E+E ++ +YK +RS++ANLK
Sbjct: 200 VRARCTELLYEALTASSPSQPRAHVWSNLAQEIEAHVFALHPKNLQKYKTCIRSKVANLK 259
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+P+N L +N + G +S + A MTA EMA+ E+K LR + K ++
Sbjct: 260 NPRNSHLQQNLLSGTMSPREFAKMTA-------------MEMASQELKQLRASYTKSALR 306
Query: 173 DAQLA-TVQGTKTDLLKCGKCKKRNC 197
+ L V+GT T +KC +C+K NC
Sbjct: 307 EHYLPQVVEGTPTRKIKCERCEKFNC 332
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
RYK + RS I NLKD NP L R + G I+ L ++AE E+A+D
Sbjct: 11 RYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAE-------------ELASDA 57
Query: 159 MKTLRNKFIKESIDDAQLAT-VQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K+ + K ++ +A+ ++ TD +CGKCK+R C Y Q+QTRSADEPMTT
Sbjct: 58 RKSENAQIRKTALFEAERGQHMKKATTDQFQCGKCKQRKCQYYQMQTRSADEPMTTF 114
>gi|440479245|gb|ELQ60026.1| transcription elongation factor S-II [Magnaporthe oryzae P131]
Length = 275
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
+ E+E+A + +K Y+N++RS +NLK ++ L++ G I+ASK MT++
Sbjct: 143 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKSNRD--LAKGVFSGNIAASKFVVMTSD-- 198
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ +++++ + KE++ AQ+ + + +D L+C KCK++ +Y Q
Sbjct: 199 -----------ELKSNDLRKQEEELAKENMKKAQVPMAERSISDALECSKCKQKKVSYTQ 247
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 248 AQTRSADEPMTTF 260
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA-----SLEEL---ATELEEAIYNEFKN 95
+K H TD V + + +G L +GLA S+EE+ A E+E A++ K
Sbjct: 121 EKRHFKTDKVDINRTSSQTRNNTIGVL-YNGLAYRRTESIEEVVKRAVEVENALFKACKG 179
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
+ Y+++ R+ +LK N L R + G + +L ++ + E+A
Sbjct: 180 ENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSDK-------------ELA 226
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++E + + KE++ AQ+ + + +D LKCGKC +R +Y+Q QTRSADEPMTT
Sbjct: 227 SEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 45 KSHNLT---DSVRLKCREMLQNSI-----QVGD--LDMDGLASLEELATELEEAIYNEFK 94
K NLT DS R + RE L + +V D L M L +A +E A++++
Sbjct: 196 KVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLAMVKKTDLVRVAVAVESALFSKLG 255
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+ K + RS + NLKD NP R + G I ++A MTA+ +M
Sbjct: 256 QSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTAD-------------DM 302
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A+D K ++++ + + TD +CGKC +R TY Q+QTRSADEPMTT
Sbjct: 303 ASDARKKENESIREKALFECERGLQNVASTDQFRCGKCGQRKTTYFQLQTRSADEPMTTF 362
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 18/152 (11%)
Query: 64 SIQVGDLDMDGLASLEELATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRN 122
+I+ GD L+ +A +E ++ +E+ + Y+N++R+ + NL++ KNP L
Sbjct: 139 AIERGDSSQQILS----VAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLRNKKNPELRDR 194
Query: 123 YIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGT 182
+ G I+ K M+ EMA + +K K K+++ DAQ AT +
Sbjct: 195 ILSGQITPGKFVKMSPN-------------EMAPETLKKEIEKLHKQNLFDAQGATEKRA 241
Query: 183 KTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
TD CGKCK + +Y Q+QTRSADEP+TT
Sbjct: 242 VTDRFTCGKCKHKKVSYYQMQTRSADEPLTTF 273
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 24/177 (13%)
Query: 51 DSVRLKCREMLQNSIQ--VGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKNR 103
D+ R K RE+L ++ + D D +A + + +A +E ++ ++ ++ K +
Sbjct: 197 DATRDKIREILHEALSKVTREADEDLVAVVNDSDPIRVAVTVESVLFEKWGPSNGAQKVK 256
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NLKD NP R + G + +L M+ T EMA+++ K
Sbjct: 257 YRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMS-------------TAEMASEQRKQEY 303
Query: 164 NKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
K ++++ + + TD KCG+C +R TY Q+QTRSADEPMTT Y+T
Sbjct: 304 QKITEKALFECERGGQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTT----YVT 356
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 22/179 (12%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA-----SLEEL---ATELEEAIYNEFKN 95
+K H TD V + + +G L +GLA S+EE+ A E+E A++ K
Sbjct: 121 EKRHFKTDKVDINRTSSQTRNNTIGVL-YNGLAYRRTESIEEVVKRAIEVENALFKACKG 179
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
+ Y+++ R+ +LK N L R + G + +L ++ + E+A
Sbjct: 180 ENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSDK-------------ELA 226
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++E + + KE++ AQ+ + + +D LKCGKC +R +Y+Q QTRSADEPMTT
Sbjct: 227 SEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTTF 285
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A E+E +Y +E+ + Y+NR+RS NL++ KNP L + I + MT
Sbjct: 171 IAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMTPN 230
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 231 -------------EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 277
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 278 YQMQTRSADEPLTTF 292
>gi|301784152|ref|XP_002927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ailuropoda melanoleuca]
Length = 373
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T VR KC ++L ++ D + LA E+EE I+ +YK VRS++A
Sbjct: 192 TVPVRAKCTQLLYEALTSPCKDPPEADLWQNLAREIEEHIFTLHSKNLKKYKTCVRSKVA 251
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P+N L +N + G S + A MT EMA+ E+K LR + +
Sbjct: 252 NLKNPQNSHLQQNLLSGTTSPREFAE-------------MTVMEMASKELKQLRASYTES 298
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
I + L ++GT+T +KC +C+K NC
Sbjct: 299 CIQEHHLPQAIEGTQTKKIKCRRCEKFNC 327
>gi|281340950|gb|EFB16534.1| hypothetical protein PANDA_017273 [Ailuropoda melanoleuca]
Length = 349
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T VR KC ++L ++ D + LA E+EE I+ +YK VRS++A
Sbjct: 169 TVPVRAKCTQLLYEALTSPCKDPPEADLWQNLAREIEEHIFTLHSKNLKKYKTCVRSKVA 228
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P+N L +N + G S + A MT EMA+ E+K LR + +
Sbjct: 229 NLKNPQNSHLQQNLLSGTTSPREFAE-------------MTVMEMASKELKQLRASYTES 275
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
I + L ++GT+T +KC +C+K NC
Sbjct: 276 CIQEHHLPQAIEGTQTKKIKCRRCEKFNC 304
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
T +YK ++RS NLK+ NP L + + ++ K MT E E+
Sbjct: 179 TKEQYKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHE-------------ELK 225
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
+DE + L K KE++D A +A + + + L+CGKC +R TY + QTRSADEPMT
Sbjct: 226 SDERRALDEKIHKENMDKAMVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMT 282
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIY-NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A E+E +Y NE+ + Y+N++RS NL++ KNP L + I ++ M+
Sbjct: 169 IAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMSPN 228
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 229 -------------EMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 275
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 276 YQMQTRSADEPLTTF 290
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 21/119 (17%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YK +VR NLKDPKNP L R+ G IS L + E E+ +DE
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPE-------------ELGSDER 47
Query: 160 KTLRNKFIKESIDDAQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ N I+E+ A V+G K TD KCGKC +R CTY Q+QTRSADEPMTT
Sbjct: 48 RN-ENAAIREA---ATAEAVRGQKQQASTDAFKCGKCGQRKCTYYQLQTRSADEPMTTF 102
>gi|335775536|gb|AEH58605.1| transcription elongation factor A N-terminal an central
domain-containing protein-like protein [Equus caballus]
Length = 353
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR KC ++L ++ + A E+EE ++ + +YK +RS++ANLK
Sbjct: 175 VRTKCTQLLYEALTSSSTHQPKADLWQNFAREIEEHVFALYSKNLKKYKTCIRSKVANLK 234
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+PKN L N + GA+S + A M+ EMA+ E+K LR + + I
Sbjct: 235 NPKNSHLQENLLSGALSPREFAE-------------MSVMEMASKELKQLRACYTESCIQ 281
Query: 173 DAQLATV-QGTKTDLLKCGKCKKRNC 197
+ L V +G++T +KC +C+K NC
Sbjct: 282 EHHLPQVMEGSQTKKIKCRRCEKFNC 307
>gi|387593442|gb|EIJ88466.1| transcription elongation factor A [Nematocida parisii ERTm3]
gi|387597099|gb|EIJ94719.1| transcription elongation factor A [Nematocida parisii ERTm1]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 54 RLKCREMLQN--SIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
R +C+E S Q+ D + ++L +L LEE I+ +T Y R++ NL
Sbjct: 7 RRRCKEEFTKVFSQQMEGTDSERASTLGDL---LEEEIHRT-TSTRAEYGMLFRTKYLNL 62
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD + L + G ++ K MT + EM + E+K L K + ++
Sbjct: 63 KDASHKWLCTSVYNGVLAIEKFIAMTGD-------------EMRSKELKELEAKIFQRAL 109
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
D +A Q +TD+ C KCK+R CTY Q+QTRSADEPMTT H +
Sbjct: 110 LDTTIAQ-QEAETDIFFCTKCKQRKCTYRQLQTRSADEPMTTYVHCVV 156
>gi|378755040|gb|EHY65067.1| transcription elongation factor A [Nematocida sp. 1 ERTm2]
Length = 164
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
L LEE I+ + Y R++ NLKD N L + G + K MT E
Sbjct: 33 LGNLLEEEIHRTTTTRTD-YGTLFRTKYLNLKDASNKWLCTSVYNGVLEIDKFIAMTGE- 90
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
+M + E+K L K + ++ D +A Q +TD+ C KCK+R CTY
Sbjct: 91 ------------DMKSKELKELEAKIFQRALLDTTIAQ-QEAETDIFFCTKCKQRKCTYR 137
Query: 201 QVQTRSADEPMTTLHHFYI 219
Q+QTRSADEPMTT H +
Sbjct: 138 QLQTRSADEPMTTYVHCVV 156
>gi|355723573|gb|AES07935.1| transcription elongation factor A N-terminal and central domain
containing [Mustela putorius furo]
Length = 146
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T VR +C E+L ++ + ++LA E+E ++ +YK VRS++A
Sbjct: 3 TAPVRARCTELLYEALTSACTEQPKADVWQDLAREIEGHLFTLHSKNLRKYKICVRSKVA 62
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P N L +N + G S + A MTA EMA++E+K LR + K
Sbjct: 63 NLKNPHNSHLQQNLLSGTTSPREFAEMTA-------------LEMASEELKQLRASYTKS 109
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
+I + L GT T +KC +C+K NC
Sbjct: 110 AIREHHLPQAAGGTPTGKIKCRRCEKFNC 138
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E+A ++ FK Y++++RS NLK N L+ + G I K M+ E
Sbjct: 169 AIEVEKAAFDAFKGDTPEYRSKLRSLFQNLKAISNRELAPAVMSGEIPPEKFVVMSHE-- 226
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ + E + K K+++ AQ+ + + +D LKCGKC ++ +Y+Q
Sbjct: 227 -----------ELKSSERRKEDEKLQKDNMKKAQVPMAEKSISDALKCGKCGQKKVSYSQ 275
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 276 AQTRSADEPMTTF 288
>gi|338729178|ref|XP_001489012.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Equus caballus]
Length = 381
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR KC ++L ++ + A E+EE ++ + +YK +RS++ANLK
Sbjct: 203 VRTKCTQLLYEALTSSSTHQPKADLWQNFAREIEEHVFALYSKNLKKYKTCIRSKVANLK 262
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+PKN L N + GA+S + A M+ EMA+ E+K LR + + I
Sbjct: 263 NPKNSHLQENLLSGALSPREFAE-------------MSVMEMASKELKQLRACYTESCIQ 309
Query: 173 DAQLATV-QGTKTDLLKCGKCKKRNC 197
+ L V +G++T +KC +C+K NC
Sbjct: 310 EHHLPQVMEGSQTKKIKCRRCEKFNC 335
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NL+D NP L R + G IS KL T++AE EMA+D+ K N ++
Sbjct: 3 NLRDGNNPDLRRRVLTGEISPEKLITLSAE-------------EMASDKRKQENNHIKEK 49
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYITV 221
++ D + T+ KCG+C +R CTY Q+QTRSADEPMTT Y+T
Sbjct: 50 ALFDCERGLAAKASTEQFKCGRCGQRKCTYYQMQTRSADEPMTT----YVTC 97
>gi|187608701|ref|NP_001120586.1| transcription elongation factor A (SII) N-terminal and central
domain containing [Xenopus (Silurana) tropicalis]
gi|171846965|gb|AAI61589.1| LOC100145741 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 35/213 (16%)
Query: 15 NNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTD-SVRLKCREMLQNSIQVGDLDMD 73
N DSS++ E+ SVT + K N D ++R KC E+L +++ D +
Sbjct: 141 NKSDSSAQDCYGNHEE------SVTDHEVPKKVNAEDLALRTKCTELLYQALRE---DSE 191
Query: 74 GLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
L+ LA +EE IY +Y+N +RS+I+NLK+PKN L + A+S
Sbjct: 192 CQEKLQNLAKAIEENIYKIHAGNTKKYRNCIRSKISNLKNPKNSHLKMQILSRALSPKVF 251
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKC 192
A M EMA DE++ LR + + + + QL V G T+ ++C +C
Sbjct: 252 A-------------EMGVMEMACDELRNLRANYTETCVQEHQLPQGVDGVHTNKIRCRRC 298
Query: 193 KKRNCTY-----------NQVQTRSADEPMTTL 214
K NCT V+T + DE M T
Sbjct: 299 DKFNCTVTMISRGTLFLPGWVRTGNPDEEMMTF 331
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E+A ++ F YK ++RS NLK N L + + G I ++ MT E
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHE-- 226
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ ++EMK + E++ AQ+ + + +D L CGKC ++ +Y+Q
Sbjct: 227 -----------ELKSEEMKKKDDALELENMKKAQVPMAEKSISDALTCGKCGQKKVSYSQ 275
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 276 AQTRSADEPMTTF 288
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 47 HNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRS 106
+ D + KC ++ S++ D L L+ EL +IY KN N VRS
Sbjct: 5 QDFEDPQKNKCMKLFYESLKYNLPSFDE-ERLHSLSFELTRSIY---KNFSNDLPKIVRS 60
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKD NP + + G I + M+ E +M + ++K K
Sbjct: 61 KCFNLKDKNNPRICKEVYEGTIKPDEYILMSNE-------------DMKSKDLKEQERKA 107
Query: 167 IKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ES+ D Q+ +Q +TD+ KC C +R +Y Q+QTRSADEPMTT
Sbjct: 108 YEESLYDIQMPEIQA-ETDMFKCSTCGQRKSSYRQLQTRSADEPMTTF 154
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E+A + ++K Y+ ++RS NLK+ +N L + G I A K MT + +
Sbjct: 169 AMEVEKAAFTKYKGDTPEYRAKMRSLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHD-E 227
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
+SA+ E+ D MK + + SI DA LKCG+C ++ +Y+Q
Sbjct: 228 LKSAERKKEDDELQKDNMKRAQVPMAERSISDA------------LKCGRCGQKKVSYSQ 275
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 276 AQTRSADEPMTTF 288
>gi|296470438|tpg|DAA12553.1| TPA: TFIIS central domain-containing protein 1-like [Bos taurus]
Length = 377
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR +C E+L ++ LA E+E ++ +YK +RS++ANLK
Sbjct: 199 VRARCTELLYEALTASSPGQPRAHVWPNLAQEIEAHVFALHPKNLQKYKTCIRSKVANLK 258
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
P N L +N + G +S + A MTA EMA+ E+K LR ++K ++
Sbjct: 259 KPHNSHLQQNLLSGTMSPREFAEMTA-------------MEMASQELKQLRASYMKSALR 305
Query: 173 DAQLA-TVQGTKTDLLKCGKCKKRNC 197
L V+GT T +KC +C+K NC
Sbjct: 306 KHYLPQVVEGTPTRKIKCERCEKFNC 331
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 78 LEELATELEEAIYNEFKN-TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+ ++A ++EE + + KN + N Y+ ++RS NLK+ NP L + G +S +L TM
Sbjct: 174 IAKIARKIEEQVLSLNKNNSGNPYRTKIRSLYLNLKEKSNPGLREAVVSGELSVPRLCTM 233
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRN 196
+ + EMA++E + + ++++ A+ A G +TD KC +C R
Sbjct: 234 SVQ-------------EMASEERQAESKRIEEQNLFKAKGAEEAGAETDAFKCFRCGLRK 280
Query: 197 CTYNQVQTRSADEPMTTL 214
Y Q QTRSADEPMTT
Sbjct: 281 TRYTQAQTRSADEPMTTF 298
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E A Y K YK ++RS NLK+ N L R + G ISA + MT + +
Sbjct: 171 AVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVMTDD-E 229
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
+S D+ E+ + MK AQ+ + + ++ L+CG+CKK+ +Y Q
Sbjct: 230 LKSEDQRKKEVELEKENMKK------------AQVPMAEKSISEDLQCGRCKKKQVSYTQ 277
Query: 202 VQTRSADEPMTTL 214
QTR+ADEPMTT
Sbjct: 278 AQTRAADEPMTTF 290
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E+A ++ F YK ++RS NLK N L + + G I ++ MT E
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHE-- 226
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ ++EMK + E++ AQ+ + + +D L CGKC ++ +Y+Q
Sbjct: 227 -----------ELKSEEMKKKDDLLEMENMKKAQVPMAEKSISDALTCGKCHQKKVSYSQ 275
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 276 AQTRSADEPMTTF 288
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 33 DKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA--------SLEELATE 84
D K + PP K TD V + +G L DGL ++ + ATE
Sbjct: 109 DDKTQKSNVPPDKRSWKTDQVNTAVTGVKARDSCIG-LMYDGLCLGSTETPRAVLQKATE 167
Query: 85 LEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
+E A +N + T Y+ ++RS NLK N L + G ++ + +MT E
Sbjct: 168 VEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMTHE---- 223
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
E+ +DE + K KE++D A + + + + L+CGKC +R TY + Q
Sbjct: 224 ---------ELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYTEAQ 274
Query: 204 TRSADEPMT 212
TRSADEPMT
Sbjct: 275 TRSADEPMT 283
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 14 SNNKDSSSKKKEAK---------EEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNS 64
++ DS+++K++A + +ED K P ++ VR K L
Sbjct: 102 ADGADSTTRKEKASVSESNIPSFSDTREDSKEEELDLPAYSGPVHSEVVRDKALRYLFRC 161
Query: 65 IQVGDLDMDGLASLEELATELEEAIYNEF---KNTDNRYKNRVRSRIANLKDPKNPMLSR 121
VG L L L E+E A+Y+ + KN Y +++ N KD KN +
Sbjct: 162 FLVGQDFGPELNKLNALVYEIENALYDHYVVNKNAQKEYNLQLKCISFNFKDIKNTFFNY 221
Query: 122 NYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ------ 175
GAI S+L TM++ +MA+DE K R+ +++S++ Q
Sbjct: 222 KVYSGAIPVSELVTMSS-------------LQMASDEKKMQRSVILEQSLEACQSDWAIK 268
Query: 176 -LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ Q +K KCGKC R TY Q+QTRS+DEPMTT
Sbjct: 269 NIFLNQKSKGQF-KCGKCNSRQTTYYQLQTRSSDEPMTTF 307
>gi|194044760|ref|XP_001927509.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Sus scrofa]
gi|194044762|ref|XP_001927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Sus scrofa]
gi|194044764|ref|XP_001927522.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Sus scrofa]
gi|311275938|ref|XP_003134981.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275940|ref|XP_003134982.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275942|ref|XP_003134980.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
Length = 352
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T VR KC E+L ++ + A E+EE I+ +YK +RS+IA
Sbjct: 171 TRPVRAKCTELLYEALAAFSTEQPRADLWHRFAQEIEECIFTLHAKNLKKYKTCIRSKIA 230
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLK+P+N L N + G +S A MT +MA+ E+K LR + +
Sbjct: 231 NLKNPRNSHLRENLLSGIMSPRAFAE-------------MTVMDMASKELKQLRASYTES 277
Query: 170 SIDDAQLA-TVQGTKTDLLKCGKCKKRNC 197
I + L V+GT T ++C +C+K NC
Sbjct: 278 CIQEHSLPQGVEGTPTKKVRCRRCEKFNC 306
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E A + +FK YK ++RS NLK+ N L ++ + G IS K M+ +
Sbjct: 176 AITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDD-- 233
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ ++E + + KE++ AQ+ Q + ++ L+CGKCKK+ +Y Q
Sbjct: 234 -----------ELKSEEQRKKELELEKENMKMAQVPQEQKSISESLECGKCKKKQVSYTQ 282
Query: 202 VQTRSADEPMTTL 214
QTR+ADEPMTT
Sbjct: 283 AQTRAADEPMTTF 295
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A +E A + +FK YK ++RS NLK+ N L ++ + G IS K M+ +
Sbjct: 175 AITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDD-- 232
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ ++E + + KE++ AQ+ Q + ++ L+CGKCKK+ +Y Q
Sbjct: 233 -----------ELKSEEQRKKELELEKENMKMAQVPQEQKSISESLECGKCKKKQVSYTQ 281
Query: 202 VQTRSADEPMTTL 214
QTR+ADEPMTT
Sbjct: 282 AQTRAADEPMTTF 294
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 82 ATELEEAIYNEFKNTDNR-YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A +E A++ EFK + YK ++RS ANLK N L + + G I K A MT E
Sbjct: 167 AVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDILPEKFAKMTDE- 225
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
+ +S D+ E+ + MK AQ+ + + +D L+C +CK + +Y
Sbjct: 226 ELKSEDQRKKEIELEKENMKR------------AQVPMAEKSISDSLECSRCKMKKVSYT 273
Query: 201 QVQTRSADEPMTTL 214
Q QTRSADEPMTT
Sbjct: 274 QAQTRSADEPMTTF 287
>gi|440494389|gb|ELQ76770.1| Transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein Sp1 [Trachipleistophora hominis]
Length = 181
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 23/144 (15%)
Query: 71 DMDGLASLEELATELEEAIYNEFKNTDNR-YKNRVRSRIANLKDPKNPMLSRNYIFGAIS 129
D+D L + LA++LE+ IY DN+ +++RS+ NLKD N + Y G I
Sbjct: 48 DVDKLRA-ARLASDLEQEIY------DNKIVSSQIRSKYLNLKDKSNDLCVGIYE-GRIG 99
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
+ M+ + EM + ++ N IK SI+ +Q+A ++ +TD+ C
Sbjct: 100 VHEFLLMSMD-------------EMKSKARRSSDNDLIKSSIEGSQIAQME-VETDIFFC 145
Query: 190 GKCKKRNCTYNQVQTRSADEPMTT 213
KCK+R C Y Q+QTRSADEPMTT
Sbjct: 146 FKCKQRKCRYRQIQTRSADEPMTT 169
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
++ +E A++ + +K + RS + NLK NP R + G + +L ++ +
Sbjct: 231 VSVTVESALFERLGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLVDISPD- 289
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA+D K L NK IKE ++ D + A TD KCG+C +R TY
Sbjct: 290 ------------EMASDARK-LENKQIKEKALFDCERAGAPKATTDQFKCGRCGQRKTTY 336
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 337 YQLQTRSADEPMTTF 351
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 53 VRLKCREMLQNSI--QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
VR +C ++ N + + + + D +A A +E A + F YK ++RS +N
Sbjct: 145 VRNQCIGLIYNGLAYRSTESETDVIAK----AVAVENAAFTLFNGEGAEYKKKIRSLFSN 200
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKES 170
LK N L + + G I+ S+ TMT E +S D+ E+ + MK
Sbjct: 201 LKSKTNRDLGKRVMSGDITPSRFVTMTDE-DLKSEDQKKMEKELEKENMK---------- 249
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
AQ+ + + +D L+CGKCKK+ +Y Q QTRSADEPMTT
Sbjct: 250 --KAQVPMAEKSISDSLECGKCKKKKVSYTQAQTRSADEPMTTF 291
>gi|76154247|gb|AAX25738.2| SJCHGC09202 protein [Schistosoma japonicum]
Length = 229
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQ----YPPQKSHNLT--DSVRLKCREMLQNSIQV 67
S++ K+ EKKE +PS +P H LT D VRLK REMLQ++++
Sbjct: 115 SDDSGPQDAKRSRPSEKKEPTEPSGNASRGFFP---VHTLTTNDQVRLKAREMLQSALES 171
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
G++ G E LA +E +IY+ F NTD +YK RVR+R+ NL+D NP L N + G
Sbjct: 172 GNIP-SGAYESEFLAIRIESSIYDLFNNTDPQYKQRVRTRVMNLRDSNNPNLRLNVLMG 229
>gi|149020697|gb|EDL78502.1| rCG64124 [Rattus norvegicus]
Length = 189
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%)
Query: 45 KSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
++ + +DSVRLKCRE L +++ GD + A EEL +++EEAIY E +NTD +YK+
Sbjct: 101 RAPSTSDSVRLKCRETLAAALRTGDDYVAIGADEEELGSQIEEAIYKEIRNTDKKYKSPE 160
Query: 105 RSRIANLKDPKNPML 119
R+RI+N+KD KNP L
Sbjct: 161 RTRISNIKDAKNPNL 175
>gi|429965603|gb|ELA47600.1| transcription elongation factor S-II [Vavraia culicis
'floridensis']
Length = 181
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 23/144 (15%)
Query: 71 DMDGLASLEELATELEEAIYNEFKNTDNRYK-NRVRSRIANLKDPKNPMLSRNYIFGAIS 129
D+D L + +LA+ELE IY DN+ ++RS+ NLKD N + + Y G I
Sbjct: 48 DVDRLRA-AQLASELEREIY------DNKIAPQQIRSKYLNLKDTSNDLCTGIYE-GRIG 99
Query: 130 ASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
+ M+ + EM + ++ N I+ SI+ +Q+A ++ +TD+ C
Sbjct: 100 VHEFLLMSMD-------------EMKSKARRSSDNDLIERSIEGSQIAQME-VETDIFFC 145
Query: 190 GKCKKRNCTYNQVQTRSADEPMTT 213
KCK+R C Y Q+QTRSADEPMTT
Sbjct: 146 FKCKQRKCRYRQIQTRSADEPMTT 169
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
ATE+E A Y F T +Y+ ++RS NLK+ NP L + ++A + MT +
Sbjct: 174 ATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNEVTAERFVRMTHD- 232
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC ++ TY
Sbjct: 233 ------------ELKSDAQREEERRIQKENMDKAMVAKAERSISTSLQCGKCGQKKVTYT 280
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 281 EAQTRSADEPMT 292
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 84 ELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
E+E A Y+ F T +Y+ ++RS NL++ NP L + I+ K MT +
Sbjct: 173 EVEAAAYSVFGPETKEQYRTKIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHD--- 229
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
E+ +DE + K KE++D A +A + + + L+CGKC +R TY +
Sbjct: 230 ----------ELKSDERREEDRKIEKENMDKAMVAKAERSISKSLQCGKCGQRKVTYTEA 279
Query: 203 QTRSADEPMT 212
QTRSADEPMT
Sbjct: 280 QTRSADEPMT 289
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
ATE+E A Y F T +Y+ ++RS NLK+ NP L + ++A + MT +
Sbjct: 174 ATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNEVTAERFVRMTHD- 232
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC ++ TY
Sbjct: 233 ------------ELKSDAQREEERRIQKENMDKAMVAKAERSISTSLQCGKCGQKKVTYT 280
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 281 EAQTRSADEPMT 292
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 84 ELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
E+E A Y+ F T +Y+ ++RS NL++ NP L + I+ K MT +
Sbjct: 173 EVEAAAYSVFGPETKEQYRTKIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHD--- 229
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
E+ +DE + K KE++D A +A + + + L+CGKC +R TY +
Sbjct: 230 ----------ELKSDERREEDRKIEKENMDKAMVAKAERSISKSLQCGKCGQRKVTYTEA 279
Query: 203 QTRSADEPMT 212
QTRSADEPMT
Sbjct: 280 QTRSADEPMT 289
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 93 FKNTDNR----YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
FK TD++ Y+N++RS I NL++ NP L + I +SK TMT +
Sbjct: 169 FKLTDSKVSDQYRNKMRSLIMNLRNKNNPELRARLLSREIKSSKFVTMTNQ--------- 219
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
E+A + +K ++++ DAQ A + TD CGKC KR +Y Q+QTRSAD
Sbjct: 220 ----ELAPEALKKELADLHQKNLFDAQGAVQKRAITDRFVCGKCNKREVSYYQMQTRSAD 275
Query: 209 EPMTTL 214
EP+TT
Sbjct: 276 EPLTTF 281
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 84 ELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
E+E A YN F T ++Y+ ++RS NLK+ N L + I++ K MT +
Sbjct: 173 EVEAAAYNAFGPETKDQYRTKIRSLYQNLKNKSNLSLRMRVLSNEITSDKFVRMTHD--- 229
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
E+ +DE + K KE++D A +A + + + L+CGKC +R TY +
Sbjct: 230 ----------ELKSDERREEDLKIQKENMDKAMVAKAERSISKSLQCGKCGQRKVTYTEA 279
Query: 203 QTRSADEPMT 212
QTRSADEPMT
Sbjct: 280 QTRSADEPMT 289
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E A++ + N + K R RS + NLKD N R + G + ++A +T
Sbjct: 246 IAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPT- 304
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA+D K L NK I+E ++ + + TD KCG+C +R TY
Sbjct: 305 ------------EMASDTRK-LENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTY 351
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 352 YQLQTRSADEPMTTF 366
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 34 KKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQV--GDLDMDGLASLEEL------- 81
KKPS P K +L D R K RE+L ++ G+ D + +
Sbjct: 118 KKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDAR 177
Query: 82 -----ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
A +E A++ + +K + RS + NL+ N R + G + +L +
Sbjct: 178 DPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDI 237
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKR 195
+ E EMA+D K L NK IKE ++ D + TD KCG+C +R
Sbjct: 238 SPE-------------EMASDARK-LENKQIKEKALFDCERGGAPKATTDQFKCGRCGQR 283
Query: 196 NCTYNQVQTRSADEPMTTL 214
TY Q+QTRSADEPMTT
Sbjct: 284 KTTYYQLQTRSADEPMTTF 302
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E A++ + N + K R RS + NLKD N R + G + ++A +T
Sbjct: 240 IAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPT- 298
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA+D K L NK I+E ++ + + TD KCG+C +R TY
Sbjct: 299 ------------EMASDTRK-LENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTY 345
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 346 YQLQTRSADEPMTTF 360
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+E A + FK YK ++RS NLK+ N L ++ + I + MT +
Sbjct: 180 VEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAMTDD----- 234
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
++ +D+ + + KE++ AQ+ + + +D L+CGKCKK+ +Y Q QT
Sbjct: 235 --------DLKSDDQRKKEIELEKENMKKAQVPMAEKSISDSLECGKCKKKQVSYTQAQT 286
Query: 205 RSADEPMTTL 214
RSADEPMTT
Sbjct: 287 RSADEPMTTF 296
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 43/218 (19%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
PAPP + E KKE +K +V P+K + TD+V K + ++++
Sbjct: 115 PAPPSKT-------------EVKKEGRKSTVD---PEKRNTNTDNVNHK---VTGDAVRD 155
Query: 68 GDLDM--DGLASLEE--------LATELEEAIYNEFKNTDNR-YKNRVRSRIANLKDPKN 116
G L + DG+A + E +A ++E A + FK+ N+ YK ++RS NLK N
Sbjct: 156 GCLKLMYDGIAFMSEESPDTVMDVARKVELAAFEHFKSETNQDYKAKMRSLFQNLKMKNN 215
Query: 117 PMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL 176
+L ++ I ++ TMT++ E+ ++E + + KE++ A
Sbjct: 216 TLLRKDVFTMKIEPTRFVTMTSD-------------ELKSEEKRKKDEELEKENMRQAMT 262
Query: 177 ATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A + + CGKCK+ Y+Q QTRSADEP+TT
Sbjct: 263 AVEEKAISTTFTCGKCKQSRVAYSQAQTRSADEPLTTF 300
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 26/185 (14%)
Query: 40 QYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDM--DGLA-----SLEEL---ATELEEAI 89
Q P+K H D+V + N ++ G + + +GLA S+EE+ A E+E A
Sbjct: 122 QGDPEKRHFKVDNVDI---SRTGNKVRDGCIGVLYNGLAYRRTESIEEILQKAMEVEAAA 178
Query: 90 YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
+ +K Y++++R + +LK N L + G I+ + MT +
Sbjct: 179 FEVYKGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTEK---------- 228
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
E+A++ + + +E++ AQ+ Q + +D L+C KCK++ +Y+Q QTRSADE
Sbjct: 229 ---ELASEAQRLRDAQLERENMLKAQVPMAQKSISDSLQCSKCKQKKVSYSQAQTRSADE 285
Query: 210 PMTTL 214
PMTT
Sbjct: 286 PMTTF 290
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 34 KKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQV--GDLDMDGLASLEEL------- 81
KKPS P K +L D R K RE+L ++ G+ D + +
Sbjct: 170 KKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDAR 229
Query: 82 -----ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
A +E A++ + +K + RS + NL+ N R + G + +L +
Sbjct: 230 DPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDI 289
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKR 195
+ E EMA+D K L NK IKE ++ D + TD KCG+C +R
Sbjct: 290 SPE-------------EMASDARK-LENKQIKEKALFDCERGGAPKATTDQFKCGRCGQR 335
Query: 196 NCTYNQVQTRSADEPMTTL 214
TY Q+QTRSADEPMTT
Sbjct: 336 KTTYYQLQTRSADEPMTTF 354
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIYN-EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++ ++E ++ E+ + ++ Y+N++R+ NL++ KNP L + I S MT
Sbjct: 156 VSRDIENEVFKAEYSSVNDNYRNKLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMTPN 215
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA + +K K K+++ DAQ AT + TD CGKCK + +Y
Sbjct: 216 -------------EMAPESLKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSY 262
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 263 YQMQTRSADEPLTTF 277
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A ++E A YN F T +Y+ ++RS NLK+ NP L + I+ K MT +
Sbjct: 240 AIQVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHD- 298
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC ++ TY
Sbjct: 299 ------------ELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQKKVTYT 346
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 347 EAQTRSADEPMT 358
>gi|225717168|gb|ACO14430.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 226
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
++ +P ++ + +DSVR+KCREML ++Q GD + A +EL ++EE+I++EF+NTD
Sbjct: 138 ISTFP--RAPSTSDSVRMKCREMLSQALQAGDDYIAIGADCDELGAQIEESIFSEFQNTD 195
Query: 98 NRYKNRVRSR 107
+YKNRVRSR
Sbjct: 196 PKYKNRVRSR 205
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 92/201 (45%), Gaps = 41/201 (20%)
Query: 21 SKKKEAKEEKKED--KKPSVTQYPPQKSHNLT---DSVRLKCREMLQNSIQVGDLDMDGL 75
SK + K EK+ KKPS P K +++ D++R K RE+L +
Sbjct: 132 SKAENIKVEKQTSGVKKPSHNIVGPPKLTSISKCNDALRDKVRELLSEA----------- 180
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK-DPKNPMLSRNYIFGAISASKLA 134
L ++ E +E I + D R+A D KNP L R + G + +L
Sbjct: 181 --LSKVVGEADEDIMDAVNACDP-------IRVAVFSGDAKNPDLRRKVLLGQVMPERLL 231
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCK 193
M E EMA+D + L N+ IKE ++ D +L TD KCG+C
Sbjct: 232 EMGPE-------------EMASDR-RQLENQQIKEKALFDCELGAAPKATTDQFKCGRCG 277
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
+R TY Q+QTRSADEPMTT
Sbjct: 278 QRKTTYYQLQTRSADEPMTTF 298
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNL-TDSVRLKCREMLQNSIQVGD-LDMDGLASLEELATE 84
+ + +E + SV Q Q + N + ++R KC ++ ++ D + L+ LA
Sbjct: 188 RSDTEESAQTSVPQNTNQHTTNCDSTALRSKCVHLILQALSTNQQTDPGHMNKLKALAEN 247
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+E ++ ++YK +RS++ANLK+P NP L + I G ++ A M+ E
Sbjct: 248 IELHVHALHGRNQHKYKFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVE----- 302
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-ATVQGTKTDLLKCGKCKKRNCTYNQV 202
EMA ++++ LR + +I + QL TV+GT T+ ++C +C +C Q+
Sbjct: 303 --------EMAGEKLRRLRETYTSLAISEHQLPETVKGTPTNKVRCRQCDSMDCRVTQI 353
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E A + E+ Y+ ++RS +NLK N L++ G I+ +K MT++
Sbjct: 165 AIEVESAAFKEYNGETADYRTQMRSLFSNLK--ANRELAKRVFAGDIATAKFVKMTSD-- 220
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
E+ +D +K KE++ AQ+ V+ + +D L+CGKCK++ +Y Q
Sbjct: 221 -----------ELKSDHLKKKEEALEKENMKKAQVPMVERSISDALECGKCKQKKVSYTQ 269
Query: 202 VQTRSADEPMTTL 214
QTRSADEPMTT
Sbjct: 270 AQTRSADEPMTTF 282
>gi|452819596|gb|EME26652.1| transcription elongation factor S-II [Galdieria sulphuraria]
Length = 204
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 84 ELEEAIYNEF-KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQT 142
E+EE ++ K T Y+ R RS NLKD KN L + I MT
Sbjct: 74 EIEEELFKSCDKETGKDYQERFRSLYRNLKDAKNASLREAVLSRTILPKDFVVMTPH--- 130
Query: 143 RSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
E+AN E+K R + KESI +++ + T ++ +C KC R C++ Q+
Sbjct: 131 ----------ELANPELKKEREQLRKESIRESKKSVDTQTFSEEFQCRKCGLRKCSFFQM 180
Query: 203 QTRSADEPMTTL---HH 216
QTRSADEPMTT HH
Sbjct: 181 QTRSADEPMTTFVTCHH 197
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 23/138 (16%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E+A Y K ++ Y+ ++RS NLK+ N L + G I SK MT
Sbjct: 168 AMEVEKAAYESHKGDNSDYRAKLRSLFQNLKNKDNRELGIQVLSGDILPSKFVVMT---- 223
Query: 142 TRSADEPMTTFEMANDEMKTLRN-----KFIKESIDDAQLATVQGTKTDLLKCGKCKKRN 196
+DE+K+ + K E++ AQ+ + + +D L+CG+C ++
Sbjct: 224 --------------HDELKSAKRIEEDKKLNYENMKMAQVPMAEKSISDALRCGRCGQKK 269
Query: 197 CTYNQVQTRSADEPMTTL 214
+Y+Q QTRSADEPMTT
Sbjct: 270 VSYSQAQTRSADEPMTTF 287
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A ++E A YN F T +Y+ ++RS NLK+ NP L + I+ K MT +
Sbjct: 174 AIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHD- 232
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC ++ TY
Sbjct: 233 ------------ELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQKKVTYT 280
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 281 EAQTRSADEPMT 292
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A ++E A YN F T +Y+ ++RS NLK+ NP L + I+ K MT +
Sbjct: 174 AIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHD- 232
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC ++ TY
Sbjct: 233 ------------ELKSDAQREEERRIHKENMDKAMVAKAERSISTSLQCGKCGQKKVTYT 280
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 281 EAQTRSADEPMT 292
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 15/135 (11%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A +E ++ + N + K R RS + NLKD N R + G + ++A +T
Sbjct: 240 IAVMVECPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPT- 298
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
EMA+D K L NK I+E ++ + + TD KCG+C +R TY
Sbjct: 299 ------------EMASDTRK-LENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTTY 345
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 346 YQLQTRSADEPMTTF 360
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR C ++ + + VG + + +A E+ Y T Y+ ++RS NLK
Sbjct: 147 VRDSCTGLMYDGLCVGSTEPPKVVLSRAIAVEVSAYKYL-GPETKEEYRTKIRSLFQNLK 205
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ NP L I G I+A + M+ + E+ + E + K KE++D
Sbjct: 206 NKSNPKLRVRVIEGEITADQFVRMSHD-------------ELRSVEQREADAKIQKENMD 252
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
A +A + + + L+CGKC +R TY + QTR+ADEPMT
Sbjct: 253 KAMVAQQERSISKSLQCGKCGQRKVTYTEAQTRAADEPMT 292
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A E+E A Y T +Y+ ++RS NLK+ NP L + ++A K MT +
Sbjct: 171 AIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNEVTAEKFVRMTHD- 229
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC +R TY
Sbjct: 230 ------------ELKSDAQREEERRIHKENMDKAMVAKAERSVSTSLQCGKCGQRKVTYT 277
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 278 EAQTRSADEPMT 289
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 85 LEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRS 144
+E ++++ + + K + RS + NLKD NP R + G I + ++ MTA+
Sbjct: 224 VETVLFSKLGLFNGKEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTAD----- 278
Query: 145 ADEPMTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
+MA+D K N+ I+E ++ + + TD +CGKC +R TY Q+Q
Sbjct: 279 --------DMASDARKK-ENEVIREKALFECERGMQNVASTDQFRCGKCGQRKTTYFQLQ 329
Query: 204 TRSADEPMTTL 214
TRSADEPMTT
Sbjct: 330 TRSADEPMTTF 340
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A+ +E A +N T +Y+ ++RS NLK+ NP L + ++ + M+ +
Sbjct: 172 ASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHD- 230
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + + KE++D A +A + + + L+CGKC +R TY
Sbjct: 231 ------------ELKSDEQREQERRIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 278
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 279 EAQTRSADEPMT 290
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 14 SNNKDSSSKKKE--AKEEKKED-KKP-SVTQYPPQKSH--NLTDSVRLKCREMLQNSI-- 65
SN + S K E +KE + D KKP SV PP+ + D R K RE+L +
Sbjct: 147 SNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAK 206
Query: 66 ---QVGDLDMDGLASLEE---------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKD 113
+ + D D + ++ + +A +E A++ F + +K + RS + NL+
Sbjct: 207 VPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRA 266
Query: 114 PKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDD 173
N R + G ++ +L ++ + EMA+D K + ++++ D
Sbjct: 267 ENNTDFRRRVLIGQVTPERLPDISPD-------------EMASDARKQENLQIKEKALFD 313
Query: 174 AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TD KCG+C +R TY Q+QTRSADEPMTT
Sbjct: 314 CERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 14 SNNKDSSSKKKE--AKEEKKED-KKP-SVTQYPPQKSH--NLTDSVRLKCREMLQNSI-- 65
SN + S K E +KE + D KKP SV PP+ + D R K RE+L +
Sbjct: 98 SNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAK 157
Query: 66 ---QVGDLDMDGLASLEE---------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKD 113
+ + D D + ++ + +A +E A++ F + +K + RS + NL+
Sbjct: 158 VPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRA 217
Query: 114 PKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDD 173
N R + G ++ +L ++ + EMA+D K + ++++ D
Sbjct: 218 ENNTDFRRRVLIGQVTPERLPDISPD-------------EMASDARKQENLQIKEKALFD 264
Query: 174 AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TD KCG+C +R TY Q+QTRSADEPMTT
Sbjct: 265 CERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 305
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 14 SNNKDSSSKKKE--AKEEKKED-KKP-SVTQYPPQKSH--NLTDSVRLKCREMLQNSI-- 65
SN + S K E +KE + D KKP SV PP+ + D R K RE+L +
Sbjct: 147 SNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAK 206
Query: 66 ---QVGDLDMDGLASLEE---------LATELEEAIYNEFKNTDNRYKNRVRSRIANLKD 113
+ + D D + ++ + +A +E A++ F + +K + RS + NL+
Sbjct: 207 VPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRA 266
Query: 114 PKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDD 173
N R + G ++ +L ++ + EMA+D K + ++++ D
Sbjct: 267 ENNTDFRRRVLIGQVTPERLPDISPD-------------EMASDARKQENLQIKEKALFD 313
Query: 174 AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TD KCG+C +R TY Q+QTRSADEPMTT
Sbjct: 314 CERGAAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A E+E A Y T +Y+ ++RS NLK+ NP L + ++A K MT +
Sbjct: 241 AIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNEVTAEKFVRMTHD- 299
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +D + + KE++D A +A + + + L+CGKC +R TY
Sbjct: 300 ------------ELKSDAQREEERRIHKENMDKAMVAKAERSVSTSLQCGKCGQRKVTYT 347
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 348 EAQTRSADEPMT 359
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 33/213 (15%)
Query: 18 DSSSKKKEAKEEKKEDK-----KPSVTQYPPQKSHNLTDSVRL-----KCREMLQNSIQ- 66
D S K E KK+DK K +V + P+ S D V K R+M+ ++
Sbjct: 100 DKQSHKTGTSESKKDDKSTHINKSTVAKGKPRNSR--IDGVNTTLYNHKLRDMVVKALYD 157
Query: 67 --VGDLDMDGLASLEELATELEEAIYNEFKNTD---NRYKNRVRSRIANLKDPKNPMLSR 121
V D + + + +LATE+E + +F + D +Y+++ R +NL NP L
Sbjct: 158 ALVKD-STESSSLILKLATEVELEM-KKFSDPDVNEKQYRDKYRVVYSNLISKNNPELKF 215
Query: 122 NYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQG 181
+ G +S ++L T + E+A + +K + K+++ +AQ ATVQ
Sbjct: 216 RIVGGDVSPARLVTCDPK-------------ELAPESLKKELEEIAKKNLYNAQGATVQR 262
Query: 182 TKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 263 SVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTF 295
>gi|453082690|gb|EMF10737.1| transcription elongation factor S-II [Mycosphaerella populorum
SO2202]
Length = 312
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 100/233 (42%), Gaps = 53/233 (22%)
Query: 8 PAPP--GISNNKDSSSKKKEAK-----EEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREM 60
PAPP G+ + +S+ A E KKE +K +V P K +TD + +
Sbjct: 94 PAPPAAGVKSGTGASATGSPATPPVKTELKKEQRKSTVD---PSKRTTITDKID---HSV 147
Query: 61 LQNSIQVGDLDM--DGLASLEE--------LATELEEAIYNEFKN-TDNRYKNRVRSRIA 109
+ ++ G L + DG+A + E +A +E A + ++ T N YK ++RS
Sbjct: 148 TGDKVRDGCLKLMYDGIAFMSEESPDAVFDVARRVEVAAFEHYRQETSNDYKTKMRSLFQ 207
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAE----VQTRSADEPM----TTFEMANDEMKT 161
NLK N +L R+ I A +L TMT+E R DE M M E K
Sbjct: 208 NLKMKDNKLLRRDVFSQKIDAKRLVTMTSEDLKSEDRRKEDEAMKEENMRVAMTPQEAKA 267
Query: 162 LRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ F C KCK+ +Y+Q QTRSADEP+TT
Sbjct: 268 ISTTFT---------------------CAKCKESKVSYSQAQTRSADEPLTTF 299
>gi|429962884|gb|ELA42428.1| transcription elongation factor S-II [Vittaforma corneae ATCC
50505]
Length = 274
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 24/179 (13%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQ--VGDLDMDGLASLEELATELEEAIYNEFKN 95
+T+ K H+ +S K EM + + V D++ D L + E +EF +
Sbjct: 106 LTEEEAIKKHSFNNSKYDKALEMFLGAFKANVKDINFDKAVFLSKCIVEHH---ISEFSS 162
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
T + VRS+ NL++ LS + SK+ T S M +M
Sbjct: 163 T---FPKEVRSKSHNLRENSKLCLS-------VYTSKIDT--------SDFVKMLPAQMQ 204
Query: 156 NDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++E+++ +++IKES+ +Q+A+ TD+ +C KCK++ CTY+Q+QTRS DEPMTT
Sbjct: 205 SEELRSRDSEYIKESLLASQVASA-AADTDMFQCSKCKQKKCTYSQLQTRSCDEPMTTF 262
>gi|326436982|gb|EGD82552.1| hypothetical protein PTSG_03204 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
Query: 77 SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
S+ ++A ++EEAI+N+F+N + YK RSR LK N +L + I G ++ + AT
Sbjct: 137 SVADVACKVEEAIFNKFRNDGDPYKKECRSRANYLK---NEILDK-LIAGELTPEQFATQ 192
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRN 196
+ ++ ++E + + +++++ D G +T+ LKCGKC K +
Sbjct: 193 AEQ-------------KLVSEEDRRETEQHLEQALRDKNPGQKMGNRTNQLKCGKCGKND 239
Query: 197 CTYNQVQTRSADEPMTTL 214
Y +VQ R+ADEPMT +
Sbjct: 240 VEYYEVQLRAADEPMTVI 257
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
Y+ ++RS NLK+ NP L + ++ + MT E E+ +DE
Sbjct: 191 YRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHE-------------ELRSDEQ 237
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
+ K KE++D A +A + + + L+CGKC +R TY + QTRSADEPMT
Sbjct: 238 REKDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMT 290
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 23/180 (12%)
Query: 43 PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA-----SLEELATELEEAIYNE---FK 94
P+K H TD+V + +G L +GLA S+EE+ +K
Sbjct: 132 PEKRHFKTDNVDISRTGNKARDGSIGVL-YNGLAYRRTESIEEVLQHAMAIEAAAFAVYK 190
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+T Y+N++R + +LK N L R + G I K MT E E+
Sbjct: 191 DTPE-YRNKIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDE-------------EL 236
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A+D + +E++ AQ+ Q + + L+CGKC K+ +Y+Q QTRSADEPMTT
Sbjct: 237 ASDAQRERDRALERENMLKAQVPMAQKSISVDLQCGKCGKKKVSYSQAQTRSADEPMTTF 296
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A+ +E A +++ T +Y+ ++RS NLK+ NP L + G ++ + M+ +
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGDVTPERFVRMSHD- 229
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ ++E + + KE++D A +A + + + L+CGKC +R TY
Sbjct: 230 ------------ELRSEEQQERDRRIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 277
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 278 EAQTRSADEPMT 289
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR C ++ + + VG + + +A E+ Y T Y+ ++RS NLK
Sbjct: 147 VRDSCTGLMYDGLCVGSTEPPKVILSRAIAVEISAYKY-LGPETKEEYRTKIRSLFQNLK 205
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ NP L + G I++ + M+ + E+ + E + K KE++D
Sbjct: 206 NKSNPKLRVRVVEGEITSDQFVRMSHD-------------ELRSVEQREADAKIQKENMD 252
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
A +A + + + L+CGKC +R TY + QTR+ADEPMT
Sbjct: 253 KAMVAQQERSISKSLQCGKCGQRKVTYTEAQTRAADEPMT 292
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A+ +E A Y T +Y+ ++RS NLK+ NP L + ++ + M+ +
Sbjct: 172 ASAVEAAAYKSLGPETKEQYRTKIRSLFQNLKNKSNPSLRIRVLSNDVTPDQFVRMSHD- 230
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + K KE++D A +A + + + L+CGKC +R TY
Sbjct: 231 ------------ELRSDEQREKDAKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 278
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 279 EAQTRSADEPMT 290
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A+ +E A +++ T +Y+ ++RS NLK+ NP L + G ++ + M+ +
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGDVTPEQFVRMSHD- 229
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ + E + K KE++D A +A + + + L+CGKC +R TY
Sbjct: 230 ------------ELRSAEQQERDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 277
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 278 EAQTRSADEPMT 289
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 36/185 (19%)
Query: 34 KKPSVTQY---PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY 90
++P+ + PP+ ++ D VR+ ML ++ VG G A +E+ L E +
Sbjct: 139 QRPTCASFIVDPPRCGNDTRDKVRV----MLAEALAVGF--NSGGAVIED---ALHELLA 189
Query: 91 NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMT 150
+ YK + RS NLKD KNP L + G+I L M+AE
Sbjct: 190 GSGSSVSGEYKAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAE----------- 238
Query: 151 TFEMANDEMKTLRNKFIKESI-DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
E+A+DE K +N+ +KE + +A TD+ +CG+CK+R CTY
Sbjct: 239 --ELASDEQKR-KNREMKEWLAKEATRGVNNAATTDMFQCGRCKQRKCTYY--------- 286
Query: 210 PMTTL 214
PMTT
Sbjct: 287 PMTTF 291
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 35/201 (17%)
Query: 33 DKKP-----SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVG-----DLDMDGLASLEELA 82
DK P S YP S D+VR + R L ++ G DL D +A
Sbjct: 222 DKAPEKISTSAEDYPGPASG---DAVRDRARGFLWRALVDGMQSGRDLGADRSGETARVA 278
Query: 83 TELEEAIYNEF---KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
E+E+A++ E+ + + Y ++++ N D KNP L+ + G + +LATM
Sbjct: 279 AEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLATMN-- 336
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESID----DAQLATVQ--GTKTDLLKCGKCK 193
SAD +A+DE K +R KES++ D ++ + GT C KC+
Sbjct: 337 ----SAD-------LASDEKKRMRELQKKESMEACQSDWEMKKLMEGGTDGGQFPCFKCR 385
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
Y Q+QTRS+DEPMTT
Sbjct: 386 TTKTVYFQMQTRSSDEPMTTF 406
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
ATE+E A + F T Y++++RS NLK+ N L + ++ + MT E
Sbjct: 165 ATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHE- 223
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + K KE++D A + + + + L+CGKC +R TY
Sbjct: 224 ------------ELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYT 271
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 272 EAQTRSADEPMT 283
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 29 EKKEDKKPSVTQYPPQ--KSHN-----LTDSVRLKCREMLQNSIQVGDLDM-------DG 74
EK ++ SV + PP+ K H+ TD + E L + V L D
Sbjct: 96 EKAAEQTNSVAKAPPKENKFHSGPRNPKTDGIDTNIYENLTRNASVSALYTALAIERDDS 155
Query: 75 LASLEELATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
+ +A ++E +Y K + + Y+ ++R+ NL++ KNP L + G IS
Sbjct: 156 SEHIVAVAKDIENEVYRSEKLSISDSYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAF 215
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
M+ +MA + +K K K+++ +AQ AT + TD CGKCK
Sbjct: 216 IKMSPN-------------DMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDRFTCGKCK 262
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
+ +Y Q+QTRSADEP+TT
Sbjct: 263 HKRVSYYQMQTRSADEPLTTF 283
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 81 LATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+A ++E +Y K + + Y+ ++R+ NL++ KNP L + G IS M+
Sbjct: 162 VAKDIENEVYRSEKLSISDSYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPN 221
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
+MA + +K K K+++ +AQ AT + TD CGKCK + +Y
Sbjct: 222 -------------DMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDRFTCGKCKHKRVSY 268
Query: 200 NQVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 269 YQMQTRSADEPLTTF 283
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 31 KEDKKPSVTQY--PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA 88
K+ + P+ T PP + S+R KC ++L ++ + + +LA +E
Sbjct: 108 KQSEPPATTSLDTPPLCKDSSDLSLRTKCIQLLHGALDP-ETSKEAEGKTADLARVIEVH 166
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
I+ +YK +RS++ NL++PKN L + G++ A M+ E
Sbjct: 167 IHALHHANQAKYKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSLE--------- 217
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLA-TVQGTKTDLLKCGKCKKRNCTYNQV 202
EMAN+E++ LR ++ + + + QL V+GT T L+C +C +C QV
Sbjct: 218 ----EMANEELQRLREEYSSQGVSERQLPQGVEGTPTQKLRCRRCDGSDCRVTQV 268
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
AT++E A + F T Y+ ++RS NLK+ N L + ++ + MT E
Sbjct: 165 ATDVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHE- 223
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + K KE++D A + + + + L+CGKC +R TY
Sbjct: 224 ------------ELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYT 271
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 272 EAQTRSADEPMT 283
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 8 PAPP-----GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQ 62
PAP G++N +D++S + K K+PS T P +KS + E+
Sbjct: 87 PAPAAKGINGVANGRDATSSPAPKTDGVK--KEPSATSNPARKSKVPPEKRTFTADEV-- 142
Query: 63 NSIQVGD--------LDMDGLASLEE--------LATELEEAIYNEFKN-TDNRYKNRVR 105
N+ GD L +GLA + E A +E A ++ N T + YK ++R
Sbjct: 143 NTDLTGDTTRNGCIGLIYNGLAYMSEESPDEVLVAARSVEAAAFSVHNNETSSAYKMKMR 202
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNK 165
S NLK N L R+ G I + TMT++ E+ N E +
Sbjct: 203 SLFQNLKMKGNATLRRDVFNGKIEPKRFVTMTSD-------------ELKNAEKRAQDAA 249
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KE++ + A + + + C KCK+ Y Q QTRSADEPMTT
Sbjct: 250 LEKENMKASMTAQEEKAISTTMTCNKCKQSRVAYTQAQTRSADEPMTTF 298
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 37/222 (16%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKP-----SVTQYPPQKSHNLTDSVRLKCREMLQNSIQ 66
G+S+N SS + E D+ P +V YP S D+VR + R L ++
Sbjct: 203 GLSSN--SSPRADEGLHGVPVDRAPEKASTAVEDYPGPAS---GDAVRDRARGFLWRALV 257
Query: 67 VG-----DLDMDGLASLEELATELEEAIYNEF---KNTDNRYKNRVRSRIANLKDPKNPM 118
G DL D +A E+E+A++ E+ + + Y ++++ N D KNP
Sbjct: 258 DGMQSRRDLGADRSGETARVAAEIEKALWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPD 317
Query: 119 LSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-- 176
L+ + G + +LA M+ SAD +A+DE K +R KES++ Q
Sbjct: 318 LNLKVLCGVYTPEQLAIMS------SAD-------LASDEKKRMRELQKKESMEACQSDW 364
Query: 177 ---ATVQG-TKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++G ++ C KC+ Y Q+QTRS+DEPMTT
Sbjct: 365 EMKKLMEGASEGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTF 406
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 82 ATELEEAIYNEFKNTDNR--YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
ATE+E A + F +N+ Y+ ++RS NLK+ N L + ++ + MT E
Sbjct: 165 ATEVEAAAFKAF-GPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMTHE 223
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTY 199
E+ +DE + K KE++D A + + + + L+CGKC +R TY
Sbjct: 224 -------------ELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTY 270
Query: 200 NQVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 271 TEAQTRSADEPMT 283
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 28/146 (19%)
Query: 80 ELATELEEAIYNEF----KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
E++ E+E A+Y E+ N+ Y ++++ NL D KNP L+ G I+ ++AT
Sbjct: 182 EISAEVESALYKEYIIKQGNSVRDYNLQLKTIKWNLGDLKNPELNSKLYIGKITPDEIAT 241
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ-------LATVQGTKTDLLK 188
M + EMA++ + R K +ES++ Q L +G T
Sbjct: 242 MHSR-------------EMASEAKQKEREKHKQESLEACQSDWDLRNLVQKEGQFT---- 284
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKC+ TY Q+QTRSADEPMTT
Sbjct: 285 CGKCRTNKTTYFQMQTRSADEPMTTF 310
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 20 SSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE 79
S ++K + ++P V+ P D +R K L S G +A L
Sbjct: 92 SKRQKTEHTDSSSPREPPVSAETPYSGALYNDEMRNKALRYLFKSFVSGHSCNPDIAVLN 151
Query: 80 ELATELEEAIYNEF---KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+L ++E +Y + N Y +++S NLKDP N + G I++ L TM
Sbjct: 152 KLVYDIEGELYTHYITRLNAQKEYNLQLKSIGFNLKDPNNKSFNDRIYKGEINSLDLVTM 211
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL--------K 188
+ +MA+DE K RN ++ES+ Q + K L +
Sbjct: 212 KS-------------IDMASDEKKLQRNNILQESLQACQ--SDWAVKNIFLNNKSKGQFR 256
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
C KCK + Y+Q+QTRS+DEPMTT
Sbjct: 257 CFKCKSSDTVYHQMQTRSSDEPMTTF 282
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNR--VRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
E A + + I +E TD + K+R V S+ NL + NP L +N G IS + MT
Sbjct: 172 EQAAIVAKKIVDELVRTD-KIKDRELVASKKLNLSNKANPELCQNVYNGTISPERYIAMT 230
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNC 197
E EM ++++K K ++ + D+QL +Q T + KC +CK+
Sbjct: 231 IE-------------EMKSEDLKKREEKMKQDQLMDSQLPKLQADTT-MFKCSRCKQSKT 276
Query: 198 TYNQVQTRSADEPMTTLHHFYITV 221
TY Q+QTRSADEPMT YIT
Sbjct: 277 TYYQLQTRSADEPMTN----YITC 296
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 9 APPGISNNKDSSSKKKEAK--------EEKKEDKKPSVTQYPPQKSHNLT-----DSVRL 55
AP + NN ++ KE + E+KK ++ + N + D +R
Sbjct: 134 APTNLDNNSTHINEDKENNTIITKSYAQNSNENKKINIVNIEEMQHWNYSGKIHHDVLRD 193
Query: 56 KCREMLQNSIQVGD----LDMDGLASLEELATELEEAIYNEF---KNTDNRYKNRVRSRI 108
K ++ L + VG L + L+ + +E +Y F KN+ Y +++S
Sbjct: 194 KAKQFLFKAFIVGSHDNLLHLIDRNKLDNIIYNIENELYKIFIEKKNSQKEYNMQLKSIK 253
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK 168
NL D KNP + ISA LATM ++ +MA+DE K R K ++
Sbjct: 254 FNLSDKKNPNFNEKIYAEYISARTLATMNSQ-------------DMASDEKKNERQKCLQ 300
Query: 169 ESI------DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
ES+ D + ++ + +C KCK + Y Q+QTRS+DEPMTT
Sbjct: 301 ESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTF 352
>gi|430810870|emb|CCJ31590.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814597|emb|CCJ28186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 276
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
D NP L +N + G +S + TMT + EMA+ E + K I+
Sbjct: 153 DKNNPTLRQNVVSGELSIPRFCTMTPQ-------------EMASKERREEDKK-----IE 194
Query: 173 DAQLATVQGTK-----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYITV 221
+ L QG K TDL +CGKCK+R +Y Q+QTRSADEPMTT + +
Sbjct: 195 EMNLFNAQGAKPIKAITDLFQCGKCKQRKVSYYQMQTRSADEPMTTFCECQVAI 248
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
FK YK ++RS NLK+ N L + + I + MT +
Sbjct: 182 FKGEGADYKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDD------------- 228
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
++ +D+ + + KE++ AQ+ + + +D L+CGKCK++ +Y Q QTRSADEPMT
Sbjct: 229 DLKSDDQRKKEIELEKENMKKAQVPMAEKSISDSLECGKCKQKKVSYTQAQTRSADEPMT 288
Query: 213 TL 214
T
Sbjct: 289 TF 290
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
ATE+E A + F T Y+ ++RS NLK+ N L + I+ + MT +
Sbjct: 165 ATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEIAPDRFVNMTHD- 223
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + K KE++D A + + + + L+CGKC +R TY
Sbjct: 224 ------------ELKSDERREEDLKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYT 271
Query: 201 QVQTRSADEPMT 212
+ QTR+ADEPMT
Sbjct: 272 EAQTRAADEPMT 283
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 72 MDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
+D S+EE +L NE YK++ R +N+ NP L G +++
Sbjct: 161 LDSAKSIEEEMNKLNNCDENE-----KAYKDKYRIIYSNIISKNNPDLKHKITNGDVTSQ 215
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
L + + E+A + +K + K+++ +AQ AT+Q + TD CGK
Sbjct: 216 YLVSCDPK-------------ELAPEHLKKKLEEIAKQNLHNAQGATIQRSITDRFTCGK 262
Query: 192 CKKRNCTYNQVQTRSADEPMTTL 214
CK++ +Y Q+QTRSADEP+TT
Sbjct: 263 CKEKKVSYYQLQTRSADEPLTTF 285
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A +E A ++ T +Y+ ++RS NLK+ NP L + ++ + MT +
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRTRVLANDVTPEQFVKMTYD- 230
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ + E + K KE++D A +A + + + L+CGKC +R TY
Sbjct: 231 ------------ELKSAEQREQDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 278
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 279 EAQTRSADEPMT 290
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A ++E A++ + +K + RS + NL+ N R + G ++ L ++ +
Sbjct: 235 VAVKVESALFERLGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPD- 293
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
EMA+D K + ++++ + + A TD KCG+C +R TY
Sbjct: 294 ------------EMASDARKQENMQIKEKALFECERAGAPKATTDQFKCGRCGQRKTTYY 341
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEPMTT
Sbjct: 342 QLQTRSADEPMTTF 355
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 19 SSSKKKEAKEEKKEDKKPSVTQYPPQKSHN----LTDSVRLKCREMLQNSIQVGDLDMDG 74
+S KKE ++ ++ +P + PP N DS+R+ + +Q + + +
Sbjct: 141 TSQSKKEEPKQTPDEIQPFI---PPGMKVNTGTQYRDSLRINFIKYMQIPEEGVEYEEIV 197
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
L +L ++E+ +Y F Y+N+ RS + NLKDPKNP L + I G I ++L
Sbjct: 198 LTRAAQLGLQIEDELYKSFPRL-AEYQNKARSLMFNLKDPKNPDLRMSLIEGVIEPNQLV 256
Query: 135 TMTAE-VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
+ ++ + +++ + + AN + R+ + E+ A +G K C KC
Sbjct: 257 RLDSKSLASKALQDERNKTQQAN--LNARRSDWFIEN------AAKKGNK-GFFTCKKCH 307
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
+N TY Q+QTR ADEPMT
Sbjct: 308 SKNTTYFQMQTRGADEPMTNF 328
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 28/146 (19%)
Query: 80 ELATELEEAIYNEF----KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
E+A E+E ++ E+ N+ Y ++++ NL D KNP L+ G I+ ++A
Sbjct: 192 EIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIAR 251
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ-------LATVQGTKTDLLK 188
M Q+R EMA+D + R K +ES++ Q L +G T
Sbjct: 252 M----QSR---------EMASDAKQKEREKHKQESLEACQSDWDLRNLIQKEGQFT---- 294
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKCK TY Q+QTRSADEPMTT
Sbjct: 295 CGKCKTNKTTYYQMQTRSADEPMTTF 320
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A +E A ++ T +Y+ ++RS NLK+ NP L + ++ + M+ +
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHD- 230
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ + E + K KE++D A +A + + + L+CGKC +R TY
Sbjct: 231 ------------ELKSAEQREQERKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 278
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 279 EAQTRSADEPMT 290
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
Y+++ R +N+ NP L G +SA L T + ++A + +
Sbjct: 178 YRDKYRIIYSNIISKNNPDLKHRITNGEVSAKHLVTADPK-------------DLAPEHL 224
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K + K+++ +AQ ATV+ + TD +CGKCK+R +Y Q+QTRSADEP+TT
Sbjct: 225 KKKIEEIEKQNLFNAQGATVERSVTDRFQCGKCKQRKVSYYQLQTRSADEPLTTF 279
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 82 ATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
A E+E A + F + Y+ ++RS NLK+ N L + ++ + MT E
Sbjct: 165 AAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMTHE- 223
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+ +DE + K KE++D A + + + + L+CGKC +R TY
Sbjct: 224 ------------ELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYT 271
Query: 201 QVQTRSADEPMT 212
+ QTRSADEPMT
Sbjct: 272 EAQTRSADEPMT 283
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 43 PQKSHNL-TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEF---KNTDN 98
P+ H+ D +R K L S+ G ++ LA ++E +++ + +N
Sbjct: 120 PRYRHSYHNDDIRDKAIIYLFKSLLAGKENVYDHKKAGRLAYDMEAGLFSRYLYNQNNQK 179
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
Y +++S NLKDPKN S G I +A M A EMA++E
Sbjct: 180 DYTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAA-------------EMASEE 226
Query: 159 MKTLRNKFIKESIDDAQ--------LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEP 210
K R ++ES++ Q L + +G K KC KC Y Q+QTRS+DEP
Sbjct: 227 KKMERINILQESLEACQSDWAVKNILLSKEGKKKGQFKCLKCHSMETVYYQLQTRSSDEP 286
Query: 211 MTTL 214
MTT
Sbjct: 287 MTTF 290
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 28/146 (19%)
Query: 80 ELATELEEAIYNEF----KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
E+A E+E ++ E+ N+ Y ++++ NL D KNP L+ G I+ ++A
Sbjct: 192 EIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIAR 251
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ-------LATVQGTKTDLLK 188
M Q+R EMA+D + R K +ES++ Q L +G T
Sbjct: 252 M----QSR---------EMASDAKQKEREKHKQESLEACQSDWDLRNLIQKEGQFT---- 294
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
CGKCK TY Q+QTRSADEPMTT
Sbjct: 295 CGKCKTNKTTYYQMQTRSADEPMTTF 320
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 8 PAPP-----GISNNKDSSSKKKEAKEEKKEDKK-----PSVTQYPPQK--------SHNL 49
PAP G +N + S + K E KK P ++ P+K H +
Sbjct: 92 PAPANKALNGAANGRSSGTSSPAPNGSKSEVKKEPASVPRQSKVDPEKRNTGADGVDHKI 151
Query: 50 T-DSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKN-TDNRYKNRVRSR 107
T D+VR C +++ + I + + ++ +A ++E A + FK T+ YK ++RS
Sbjct: 152 TGDAVRDGCLKLMYDGIAF--MSKESPDAVLTVARKVEVAAFEHFKRETNAEYKTKMRSL 209
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFI 167
NLK N +L +N I K MT+E + +SA++ A D + + + +
Sbjct: 210 FQNLKMRSNTLLRKNVFSEEIPPEKFVAMTSE-ELKSAEK------RAEDAL--IEKENM 260
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+S+ + + T T CGKCK +Y+Q QTRSADEP+TT
Sbjct: 261 NKSMTPKEAKAISTTMT----CGKCKGSAVSYSQAQTRSADEPLTTF 303
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+EE +++ ++ Y +++RS NL D NP + G K +T+T+E
Sbjct: 174 AVEIEEECHSKL--SEREYLSQIRSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSE-- 229
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ--LATVQGT--KTDLLKCGKCKKRNC 197
+MA++ R K ++++ Q A G K+ + +CGKC+K
Sbjct: 230 -----------DMASEAKNQHRANAAKAALEECQSDWAMRHGAIQKSGMFQCGKCRKSQT 278
Query: 198 TYNQVQTRSADEPMTTL 214
TY Q+QTRS+DEPMTT
Sbjct: 279 TYFQMQTRSSDEPMTTF 295
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 51 DSVRLKCREMLQNSIQVGD----LDMDGLASLEELATELEEAIYNEF---KNTDNRYKNR 103
D++R K ++ L + G L + L+ + +E +Y F KN+ Y +
Sbjct: 190 DALRDKAKQFLFKAFITGSHDNLLHLIDRNKLDNIIYNIENELYKIFIEKKNSQKEYNMQ 249
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
++S NL D KNP + ISA LATM ++ +MA+DE K R
Sbjct: 250 LKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQ-------------DMASDEKKNER 296
Query: 164 NKFIKESI------DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K ++ES+ D + ++ + +C KCK + Y Q+QTRS+DEPMTT
Sbjct: 297 QKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTF 353
>gi|71032861|ref|XP_766072.1| transcription elongation factor SII [Theileria parva strain Muguga]
gi|68353029|gb|EAN33789.1| transcription elongation factor SII, putative [Theileria parva]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 26/151 (17%)
Query: 75 LASLEELATELEEAIYNEFK-NTDNR--YKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
L L EL +E ++Y+ + DNR Y +++ NLKD KN +L+ I+
Sbjct: 177 LTRLSELINSMELSLYDHYVVENDNRKAYNQQLKCIAFNLKDVKNTILNYKLYNKMITVD 236
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL---- 187
+L TR MT+ +MA+DE K RN+ +++S++ Q + K L
Sbjct: 237 EL--------TR-----MTSLQMASDEKKLQRNEILEQSLEACQ--SDWAIKNIFLAKKS 281
Query: 188 ----KCGKCKKRNCTYNQVQTRSADEPMTTL 214
KC KC + TY Q+QTRS+DEPMTT
Sbjct: 282 AGQFKCNKCNSKVTTYYQLQTRSSDEPMTTF 312
>gi|281207318|gb|EFA81501.1| hypothetical protein PPL_05490 [Polysphondylium pallidum PN500]
Length = 141
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTT 213
MAN E++ R K +K S + A L+ T TD +CGKCK+R CTY Q+QTRSADEP+TT
Sbjct: 1 MANKELQEERKKMLKFSKEAATLSRDAAT-TDQFQCGKCKQRKCTYFQLQTRSADEPLTT 59
Query: 214 L 214
Sbjct: 60 F 60
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 8 PAPPGI---SNNKDSSSKKKEAKEEKKEDKKPS-VTQYPPQKSHNLTDSVRLKCREMLQN 63
PAP G + N SS A K E KK + P+K + TD + E+ +
Sbjct: 94 PAPAGKGLNATNGRSSGTNSPAPPSKPEIKKEQRANKVDPEKRNTKTDGIE---HEVTGD 150
Query: 64 SIQVGDLDM--DGLASLEE--------LATELEEAIYNEFKN-TDNRYKNRVRSRIANLK 112
+ G L + DG+A + + +A ++E A + FK+ T YK ++RS NLK
Sbjct: 151 RARDGCLKLMYDGIAYMSDKSPDAIFDVARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLK 210
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
N L ++ I + MT++ E+ ++EM+ +E+++
Sbjct: 211 MKGNARLRKDVYSMEIMPKRFVAMTSD-------------ELKSEEMRKEDAVIERENMN 257
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
A A + + CGKCK+ Y+Q QTRSADEP+TT
Sbjct: 258 KAMTAQEEKAISTTFVCGKCKQAKVAYSQAQTRSADEPLTTF 299
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 18/161 (11%)
Query: 16 NKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+K + +K+E K +K E PSV P+ S D +R R L++ I + L L
Sbjct: 872 SKPGTHEKQEVKRKKVEKGVPSVHPAAPRASKPSADQIRQSVRHSLKD-ILMKRLTESNL 930
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 931 KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 990
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M++E E+A+ E+ R + + +I+
Sbjct: 991 HLIKMSSE-------------ELASKELAAWRRRENRHTIE 1018
>gi|61554104|gb|AAX46508.1| hypothetical protein MGC17403 [Bos taurus]
Length = 326
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR +C E+L ++ LA E+E ++ +YK +RS++ANLK
Sbjct: 199 VRARCTELLYEALTASSPSQPRAHVWSNLAQEIEAHVFALHPKNLQKYKTCIRSKVANLK 258
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+P+N L +N + G +S + A MTA EMA+ E+K LR + K ++
Sbjct: 259 NPRNSHLQQNLLSGTMSPREFAKMTA-------------MEMASQELKQLRASYTKSALR 305
Query: 173 DAQLATVQGTKTD 185
+ L V TD
Sbjct: 306 EHYLPQVVXGHTD 318
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
++ + +L+ ++EE ++N F +T +RYKN+ RS NLKD KN L + G IS SKL
Sbjct: 526 MSVVSKLSKDIEEQLFNLFNDTGSRYKNKYRSLSFNLKDEKNKALVERILHGDISPSKLV 585
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
MT+E E+AN E+ R K K++I+ +LA + T L K K
Sbjct: 586 RMTSE-------------ELANKELAQWREKETKKNIEMIKLAQTENVVTVLKKNHK 629
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 17/141 (12%)
Query: 77 SLEELATELEEAIYNEFK---NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
S+ +A ++E+ +Y + K D YK++ R +N+ NP L G IS L
Sbjct: 167 SILAIAIDIEKHMY-KLKIPAENDKGYKDKYRVIYSNVISKNNPDLKHKITNGDISPDYL 225
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
+ E+A + +K + K+++ +AQ AT++ + TD +CGKCK
Sbjct: 226 VNCDPK-------------ELAPEHLKKKLEEIAKQNLFNAQGATLERSVTDRFQCGKCK 272
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
++ +Y Q+QTRSADEP+TT
Sbjct: 273 EKKVSYYQLQTRSADEPLTTF 293
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 23/122 (18%)
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
T +Y+ ++RS NLK+ NP L ++ +++EV P +M+
Sbjct: 188 TKEQYRTKIRSLYQNLKNKSNPTL------------RVRVLSSEV------TPEHFVKMS 229
Query: 156 NDEMKTLRN-----KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEP 210
+DE+++ K K+++D A +A + + + L+CGKC +R TY + QTRSADEP
Sbjct: 230 HDELRSAEQREQDAKIQKQNMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEP 289
Query: 211 MT 212
MT
Sbjct: 290 MT 291
>gi|157833931|pdb|1TFI|A Chain A, A Novel Zn Finger Motif In The Basal Transcriptional
Machinery: Three-Dimensional Nmr Studies Of The Nucleic-
Acid Binding Domain Of Transcriptional Elongation Factor
Tfiis
Length = 50
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 181 GTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
GT+TDL CGKCKK+NCTY QVQTRSADEPMTT
Sbjct: 4 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 37
>gi|167535081|ref|XP_001749215.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772368|gb|EDQ86021.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 33 DKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNE 92
D K + T P H D VR K RE+L + + + A+ +A ++E A +
Sbjct: 112 DGKAAQTVLEPH--HRCDDPVRNKFRELLCKKLSAS-IKPEDTANAGMVAADIENACF-- 166
Query: 93 FKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
K++D+ Y+ RSRI KD +I GA + EV +
Sbjct: 167 IKHSDSASEDYRALTRSRIQYCKD---------WIRGA--------LMQEVMAPEEFVKL 209
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADE 209
+ + + E + + K ++++ D LA +G TD L C +CK R+ +Y +VQTRSADE
Sbjct: 210 SGSALLSKEQQDVLQKDLEKASHDRALAVAEGASTDQLVCPRCKARDASYTEVQTRSADE 269
Query: 210 PMTTL 214
PMT
Sbjct: 270 PMTIF 274
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 45 KSHNLTDSVRLKCREMLQNSIQVGDLD----MDGLASLEELATELEEAIYNEF---KNTD 97
K HN D +R K ++ L + G D + L ++ +E ++ F K +
Sbjct: 256 KFHN--DVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDIIYNIENELHKFFIEKKQSQ 313
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
Y +++S NL D KNP + I +ATM ++ EMA+D
Sbjct: 314 KEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQ-------------EMASD 360
Query: 158 EMKTLRNKFIKESID------DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
E K RNK ++ES+ D + ++ T+ +C KCK Y+Q+QTRS+DEPM
Sbjct: 361 EKKKERNKCLQESLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPM 420
Query: 212 TTL 214
TT
Sbjct: 421 TTF 423
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
EL LE+ ++ F + Y +++S NL+D N L+ N G I+ +LATM +
Sbjct: 162 ELIYNLEQHVFESF-HEKRLYAQQIKSIRFNLQDNNNTQLNYNLHVGEITPQQLATMAPQ 220
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESI-----DDAQLATVQGTKT-DLLKCGKCK 193
+MA++++K R +KES+ D A + +KT C KCK
Sbjct: 221 -------------DMASEKLKRKREMVLKESMLACQSDWAVKNILLSSKTPGQFTCFKCK 267
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
+ Y QVQTRS+DEPMTT
Sbjct: 268 QSKTVYTQVQTRSSDEPMTTF 288
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 179 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 234
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 235 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 285
Query: 204 TRSADEPMTTL 214
TRSADEP+TT
Sbjct: 286 TRSADEPLTTF 296
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 27/178 (15%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEE---------LATELEEAIYNEFKNT 96
D R K RE+L + + D D D + ++ + +A +E A++ +
Sbjct: 191 DPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVAVTVESALFERLGPS 250
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
++ + RS + NL+ N R + G ++ +L ++ + EMA+
Sbjct: 251 TGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPD-------------EMAS 297
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D K + ++++ D + TD KC +C +R TY Q+QTRSADEPMTT
Sbjct: 298 DARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTF 355
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
I+ E KN+ Y +++S NL D KNP + ISA LATM ++
Sbjct: 236 IFIERKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQ--------- 286
Query: 149 MTTFEMANDEMKTLRNKFIKESI------DDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
+MA+DE K R K ++ES+ D + ++ + +C KCK + Y Q+
Sbjct: 287 ----DMASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQL 342
Query: 203 QTRSADEPMTTL 214
QTRS+DEPMTT
Sbjct: 343 QTRSSDEPMTTF 354
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 77 SLEELATELEEAIY--NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
S+ + A +EE ++ N ++ YK++ R +N+ NP L G +S L
Sbjct: 156 SILQTAKAVEEEMHKLNNCDGSEKAYKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLV 215
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
+ E+A + ++ + K+++ +AQ ATV+ + TD CGKCK+
Sbjct: 216 NCDPK-------------ELAPEHLRRKLEEIAKQNLFNAQGATVERSVTDRFTCGKCKE 262
Query: 195 RNCTYNQVQTRSADEPMTTL 214
+ +Y Q+QTRSADEP+TT
Sbjct: 263 KKVSYYQLQTRSADEPLTTF 282
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 179 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 234
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 235 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 285
Query: 204 TRSADEPMTTL 214
TRSADEP+TT
Sbjct: 286 TRSADEPLTTF 296
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 179 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 234
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 235 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 285
Query: 204 TRSADEPMTTL 214
TRSADEP+TT
Sbjct: 286 TRSADEPLTTF 296
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 77 SLEELATELEEAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
S+ A +E+ + N+ N D+ YK R R +N+ NP L G I+ L
Sbjct: 170 SILHTAKAIEDEM-NKINNCDSSEALYKARYRIIYSNIISKNNPDLKHKIANGDITPEFL 228
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCK 193
AT A+ ++A +K + K+++ +AQ AT++ + TD CGKCK
Sbjct: 229 ATCDAK-------------DLAPAPLKQKIEEISKQNLYNAQGATIERSVTDRFTCGKCK 275
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
++ +Y Q+QTRSADEP+TT
Sbjct: 276 EKKVSYYQLQTRSADEPLTTF 296
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEE---------LATELEEAIYNEFKNT 96
D R K RE+L + + D D D + ++ + +A +E A++ +
Sbjct: 69 DPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPS 128
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
++ + RS + NL+ N R + G ++ +L + + EMA+
Sbjct: 129 TGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPD-------------EMAS 175
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D K + ++++ D + TD KC +C +R TY Q+QTRSADEPMTT
Sbjct: 176 DARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTF 233
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 112 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 167
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 168 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 218
Query: 204 TRSADEPMTTL 214
TRSADEP+TT
Sbjct: 219 TRSADEPLTTF 229
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEE---------LATELEEAIYNEFKNT 96
D R K RE+L + + D D D + ++ + +A +E A++ +
Sbjct: 191 DPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPS 250
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN 156
++ + RS + NL+ N R + G ++ +L + + EMA+
Sbjct: 251 TGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPD-------------EMAS 297
Query: 157 DEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D K + ++++ D + TD KC +C +R TY Q+QTRSADEPMTT
Sbjct: 298 DARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTF 355
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 49 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 104
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 105 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 155
Query: 204 TRSADEPMTTL 214
TRSADEP+TT
Sbjct: 156 TRSADEPLTTF 166
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELE 86
K+E K K PS+ P + SVR +E+L ++ DL++ + ELA ++E
Sbjct: 671 KQESKH-KAPSLASKKPVSLEAIRRSVRDSLKEILIQRLKDSDLNIS-VERASELAKKIE 728
Query: 87 EAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSAD 146
+++ +K+TDN+YKN+ RS + NLKD KN +L + + G IS + L M+ E
Sbjct: 729 RELFHLYKDTDNKYKNKYRSLMFNLKDTKNNILCKRVLKGEISPANLIRMSPE------- 781
Query: 147 EPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 782 ------ELASKELAAWRQRENRHTIE 801
>gi|322786332|gb|EFZ12882.1| hypothetical protein SINV_16431 [Solenopsis invicta]
Length = 120
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 64/103 (62%), Gaps = 14/103 (13%)
Query: 13 ISNNKDSSSKKKE----------AKEEKK-EDKKPSVTQYPPQKSHNLTDSVRLKCREML 61
I K+ S +KKE AKEEK +D + +P + TD+VRLKCRE+L
Sbjct: 20 IDKAKEESDQKKEKDTIDGADTKAKEEKPVKDIQRKQASFP---APTTTDAVRLKCRELL 76
Query: 62 QNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
+++V +DG AS EELA ELEEAIY EFKNTDNRYKNRV
Sbjct: 77 AAALRVDGKVIDGCASPEELAEELEEAIYTEFKNTDNRYKNRV 119
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E ++ +F++ Y ++ RS NLK KN L + I G +SAS+L + T+E
Sbjct: 180 AVEIEASLTEKFRDRKG-YTDKARSLAFNLK--KNQSLCQEVILGQVSASELVSFTSE-- 234
Query: 142 TRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----------GTKTDLLK--- 188
++A+ E + R K+ ID +L Q G K DLL
Sbjct: 235 -----------QLASAETRQARATEAKKLIDSRRLDWDQANEDKINEMCGIKGDLLNASL 283
Query: 189 --CGKCKKRNCTYNQVQTRSADEPMTTL 214
CG+CK T Q QTRSADEPMT
Sbjct: 284 FTCGRCKSVKTTSTQKQTRSADEPMTVF 311
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 45 KSHNLTDSVRLKCREMLQNSIQVGDLD----MDGLASLEELATELEEAIYNEF---KNTD 97
K HN D +R K ++ L + G D + L ++ +E ++ F K +
Sbjct: 223 KFHN--DVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDIIYNIENELHKFFIEKKQSQ 280
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
Y +++S NL D KNP + I +ATM ++ EMA+D
Sbjct: 281 KEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQ-------------EMASD 327
Query: 158 EMKTLRNKFIKESID------DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPM 211
E K RNK ++ES+ D + ++ T+ +C KCK Y+Q+QTRS+DEPM
Sbjct: 328 EKKKERNKCLQESLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPM 387
Query: 212 TTL 214
TT
Sbjct: 388 TTF 390
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A E E N + + YK++ R AN+ NP L G +S L +
Sbjct: 160 IAIEKELNKVNNCELNEKAYKDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPK- 218
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
E+A + +K + ++++ +AQ AT++ + TD CGKCK++ +Y
Sbjct: 219 ------------ELAPEHLKKKNEEIARQNLFNAQGATLERSVTDRFTCGKCKEKKVSYY 266
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 267 QLQTRSADEPLTTF 280
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
I+ E K + Y +++S NL D KNP + IS +ATM ++
Sbjct: 277 IFIEKKQSQKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQ--------- 327
Query: 149 MTTFEMANDEMKTLRNKFIKESID------DAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
EMA+DE K RNK ++ES+ D + ++ + +C KCK Y+Q+
Sbjct: 328 ----EMASDEKKKERNKCLQESLQACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQL 383
Query: 203 QTRSADEPMTTL 214
QTRS+DEPMTT
Sbjct: 384 QTRSSDEPMTTF 395
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YK R R +N+ NP L G I+ LAT A+ ++A +
Sbjct: 14 YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK-------------DLAPAPL 60
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 61 KQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTF 115
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 78 LEELATELEEAIYNEFK---NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
L +LA E+E +++ K +++ +Y R+RS +NL+ NP L RN I K+
Sbjct: 101 LLKLAKEIEAEVFHAEKFDTSSNTKYAQRLRSLTSNLRQKNNPEL-RNKINNGDLLPKVF 159
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
M+ EMA + +K + K+++ +AQ AT + TD CGKCK+
Sbjct: 160 IN------------MSPREMAPESLKKELEEIKKKNLFNAQGATQERAVTDRFTCGKCKE 207
Query: 195 RNCTYNQVQTRSADEPMTTL 214
+ +Y Q+QTRSADEP+TT
Sbjct: 208 KKVSYYQLQTRSADEPLTTF 227
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
Y+ R R +N+ NP L G ++A L+ +++ ++A + +
Sbjct: 189 YRERYRIIYSNVISKNNPDLKHKITNGEVTAEFLSKCSSK-------------DLAPEYL 235
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K ++ K+++ +AQ AT++ + TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 236 KQKMDEISKQNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTF 290
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
+Y E +++ Y +++S NL D KNP + IS+ LATM ++
Sbjct: 273 VYMEKRSSQKEYNMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQ--------- 323
Query: 149 MTTFEMANDEMKTLRNKFIKESI------DDAQLATVQGTKTDLLKCGKCKKRNCTYNQV 202
+MA+DE K R K ++ES+ D + ++ ++ +C KCK + Y+Q+
Sbjct: 324 ----DMASDEKKNERKKCLQESLLACQSDWDVKNILLKKSRKGEFQCFKCKGYDTIYHQL 379
Query: 203 QTRSADEPMTTL 214
QTRS+DEPMTT
Sbjct: 380 QTRSSDEPMTTF 391
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 43 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 98
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 99 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 149
Query: 204 TRSADEPMTTL 214
TRSAD P+TT
Sbjct: 150 TRSADHPLTTF 160
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 24/171 (14%)
Query: 54 RLKCREMLQNSIQVG-DLDMDGLASLEELATELEEAIYNEF---KNTDNRYKNRVRSRIA 109
R K L +S +G D +++ + L E +E+++YN + KN Y +++
Sbjct: 250 RDKALRYLFDSFIIGKDFEIE-MEELTEKINLIEKSLYNYYIIEKNNQKGYNQQLKCIGF 308
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD KN + + IS ++L M++ +MA+DE K RN+ +++
Sbjct: 309 NLKDNKNTIFNYKLYNNIISINELIHMSS-------------LQMASDEKKLQRNEILEQ 355
Query: 170 SID----DAQLATV--QGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
S++ D ++ + KC KC + TY Q+QTRS+DEPMTT
Sbjct: 356 SLEACQSDWEIKNIFLNNKTKGQFKCNKCNSKITTYYQLQTRSSDEPMTTF 406
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A E E N+ + YK++ R +N+ NP L G +S +L +
Sbjct: 173 IAIEEEMHKLNDSSIKEKEYKDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPK- 231
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYN 200
++A + +K + K+++ +AQ AT++ + TD CGKCK++ +Y
Sbjct: 232 ------------DLAPEHLKKKMEEIKKQNLFNAQGATIERSVTDRFTCGKCKEKKVSYY 279
Query: 201 QVQTRSADEPMTTL 214
Q+QTRSADEP+TT
Sbjct: 280 QLQTRSADEPLTTF 293
>gi|296421697|ref|XP_002840401.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636616|emb|CAZ84592.1| unnamed protein product [Tuber melanosporum]
Length = 110
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 22/109 (20%)
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATM----TAEVQTRSADEPMTTFEMANDEMKTLRNK 165
NLK N + +R + G I+ ++L+TM A Q R ADE K
Sbjct: 7 NLKSKDNNLRNR-VVSGEITPARLSTMESSEMASAQRRQADE-----------------K 48
Query: 166 FIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++E++ A +A + + +D L CGKC ++ +Y Q QTRSADEPMTT
Sbjct: 49 LMEENMRTAMMAKSEKSISDQLTCGKCGQKKVSYTQAQTRSADEPMTTF 97
>gi|169806152|ref|XP_001827821.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
gi|161779269|gb|EDQ31292.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
Length = 180
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 24/149 (16%)
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF- 125
+ D+D L +++L+ +L + I ++ T + VR + +LK K+ N I+
Sbjct: 43 ISDID---LKIVKQLSLDLAQFINKYYQKT---FPKIVREKAQHLKISKDIC---NKIYN 93
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTD 185
G I+ + +++E +M +++ K K +++SI+ ++ A + +T
Sbjct: 94 GEITIKEFVELSSE-------------DMKSEKQKLEEKKIVEDSINSSRQACTEA-ETT 139
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ KCG+C+K CTY Q+QTRS DEPMTT
Sbjct: 140 MFKCGRCQKNQCTYYQLQTRSCDEPMTTF 168
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK--SHNLTDSVRLKCREMLQNSIQVGD 69
G ++K + +K+E K++K + PSV +PP S TD +R R L+ I +
Sbjct: 801 GEKSSKSGTHEKQEMKKKKVDKGVPSV--HPPAAPASKPSTDQIRQSVRHSLKE-ILMKR 857
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 858 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 917
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 918 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 951
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK--SHNLTDSVRLKCREMLQNSIQVGD 69
G ++K + +K+E K++K + PSV +PP S TD +R R L+ I +
Sbjct: 889 GEKSSKSGTHEKQEMKKKKVDKGVPSV--HPPAAPASKPSTDQIRQSVRHSLKE-ILMKR 945
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 946 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 1005
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1006 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1039
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 2 NFIFLFPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREML 61
N I P P S+ +K+E K++K E P V S D +R R L
Sbjct: 872 NIICTAPKP-------GSTHEKQEPKKKKAEKGTPGVHPAAAPTSKPSADQIRQSVRHSL 924
Query: 62 QNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNP 117
++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN
Sbjct: 925 KD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNN 983
Query: 118 MLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+L + + G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 984 ILFKKVLKGEVTPDHLIKMSPE-------------ELASKELAAWRRRENRHTIE 1025
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLD 71
G +K + +K+E K++K E PSV D +R R L++ I + L
Sbjct: 879 GEKASKPGAHEKQEIKKKKMEKGTPSVHPPAAPAPKPSADQIRQSVRHSLKD-ILMKRLT 937
Query: 72 MDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G
Sbjct: 938 DSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLRGE 997
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 998 VTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1029
>gi|156841304|ref|XP_001644026.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114659|gb|EDO16168.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
LA+ + + E+ +A + + + YK R R +N+ + L G I+A LA
Sbjct: 186 LATCKSIEEEMNKAY--DCDSNEKSYKERYRVIYSNIISKNHQDLKHKINNGDITAVFLA 243
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
T E+A + +K + ++++ +AQ AT++ + TD CGKCK+
Sbjct: 244 NCD-------------TKELAPEHLKQKMEEITRQNLFNAQGATIERSVTDRFTCGKCKE 290
Query: 195 RNCTYNQVQTRSADEPMTTL 214
+ +Y Q+QTRSADEP+TT
Sbjct: 291 KKVSYYQLQTRSADEPLTTF 310
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 77 SLEELATELEEAIY--NEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
S+ +A ++E+ ++ N+ + YK++ R +N+ N L G I+ L
Sbjct: 165 SILAIAIDIEKHMWQLNDPGENEKAYKDKYRVIYSNVISKNNRDLKHKITNGDITPEYLV 224
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
+ E+A + ++ + K+++ +AQ AT++ + TD +CGKCK+
Sbjct: 225 NCDPK-------------ELAPEHLRKKLEEIAKQNLFNAQGATLERSVTDRFQCGKCKE 271
Query: 195 RNCTYNQVQTRSADEPMTTL 214
+ +Y Q+QTRSADEP+TT
Sbjct: 272 KKVSYYQLQTRSADEPLTTF 291
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 51 DSVRLKCREMLQNSI-----QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVR 105
+ VRL R++L++++ + DL + G + +A +EE ++ F++T RYK++ R
Sbjct: 1015 EPVRLNVRKVLRDALLNRCKEASDLSLSG-DEVRRMALRIEEELFKVFRDTGTRYKSKYR 1073
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR-- 163
S + N+KD +N L R + G I+ +L MT E E+A+ E+ R
Sbjct: 1074 SLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPE-------------ELASKELARWREQ 1120
Query: 164 -NKFIKESIDDAQLATVQGTKTDLL 187
NK E I Q+ Q + L
Sbjct: 1121 ENKHTIEMIKKEQMEAAQNVSSHAL 1145
>gi|449020026|dbj|BAM83428.1| probable transcription elongation factor S-II [Cyanidioschyzon
merolae strain 10D]
Length = 794
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 81 LATELEEAIYNEFKNTDNR--YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
L ELE A+ +F R Y + R ANL+ +N L + +S ++L M+A
Sbjct: 662 LCIELERALNAKFSFDFARPDYSAKYRELKANLR--RNADLRWRLLRQELSPAELVDMSA 719
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E + ++ + + + + Q Q TD +CGKC +R+CT
Sbjct: 720 EA-------------LKTEQAREREAEIAERMLFHKQRGIPQAASTDQFRCGKCGQRSCT 766
Query: 199 YNQVQTRSADEPMTTL 214
Y Q+QTRSADEPMTT
Sbjct: 767 YFQMQTRSADEPMTTF 782
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 76 ASLEELATELEE---AIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
+S+ + A ++E+ A+Y+ ++ +YK + R +N+ NP L G ++
Sbjct: 169 SSVLQTAVDIEKEMNALYDHV-TSEKQYKEKYRIVYSNIISRNNPDLKFKITNGDLTPQF 227
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
+ + E+A + ++ + K+++ +AQ AT++ + TD +CGKC
Sbjct: 228 VVQCDPK-------------ELAPEHLRQKIEEITKQNLFNAQGATIERSVTDRFQCGKC 274
Query: 193 KKRNCTYNQVQTRSADEPMTTL 214
K++ +Y Q+QTRSADEP+TT
Sbjct: 275 KEKKVSYYQLQTRSADEPLTTF 296
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHN--LTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E +++K E P+V +PP S + D +R R L++ I +
Sbjct: 1060 GEKGSKQGAHEKQEIRKKKIEKGVPNV--HPPATSTSKPSADQIRQSVRHSLKD-ILMKR 1116
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 1117 LTESNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 1176
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1177 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1210
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 21/162 (12%)
Query: 16 NKDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTDSVRLKCREMLQNSIQVGDLDMDG 74
+K + +K+E K++K E P V +PP S D +R R L++ I + L
Sbjct: 873 SKSGTHEKQEMKKKKIEKGGPHV--HPPAAASKPSADQIRQSVRHSLKD-ILMRRLTDSN 929
Query: 75 LASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISA 130
L EE +AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 930 LKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTP 989
Query: 131 SKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 990 DHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1018
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P V +PP S D +R R L++ I +
Sbjct: 878 GEKASKPGAHEKQEIKKKKTEKGLPGV--HPPAVPASKPSADQIRQSVRHSLKD-ILMKR 934
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 935 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 994
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 995 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1028
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P V +PP S D +R R L++ I +
Sbjct: 878 GEKASKPGAHEKQEIKKKKTEKGLPGV--HPPAVPASKPSADQIRQSVRHSLKD-ILMKR 934
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 935 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 994
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 995 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1028
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
T +V+ +L+ + DLD+ +L A +E+ I+ F +TD RYK + RS +
Sbjct: 231 TTTVQALSDVLLKRVKEAPDLDVQE-ETLLNAAKNIEQEIFALFYHTDARYKKKYRSILF 289
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKDP N +L R + G I+ LA++++ EMA DE+ RN+ K
Sbjct: 290 NLKDPNNKVLFRRLVLGEITPQHLASLSST-------------EMAGDELTNWRNEEKKH 336
Query: 170 SID 172
+D
Sbjct: 337 VLD 339
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P V +PP S D +R R L++ I +
Sbjct: 878 GEKASKPGAHEKQEIKKKKTEKGLPGV--HPPAVPASKPSADQIRQSVRHSLKD-ILMKR 934
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 935 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 994
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 995 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1028
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P V +PP S D +R R L++ I +
Sbjct: 797 GEKASKPGAHEKQEIKKKKTEKGLPGV--HPPAVPASKPSADQIRQSVRHSLKD-ILMKR 853
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 854 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 913
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 914 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 947
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ--KSHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P V +PP S D +R R L++ I +
Sbjct: 790 GEKASKPGAHEKQEIKKKKTEKGLPGV--HPPAVPASKPSADQIRQSVRHSLKD-ILMKR 846
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 847 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 906
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 907 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 940
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
E+A + +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+QTRSADEP+T
Sbjct: 234 ELAPEHLKQKLEEIKKQNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLT 293
Query: 213 TL 214
T
Sbjct: 294 TF 295
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 14 SNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKS------HNLTDSVRLKCREMLQNSIQV 67
S K +K+EAK+++ E + + + P S + SVR +E+L+ +
Sbjct: 886 SATKTGVQEKQEAKKKRTEKGRTASNTHTPVSSATKPSVDQIRQSVRQSLKEILEKRLTD 945
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
L + + + +AT++E+ +++ F++TD++YKN+ RS I NLKDPKN +L + + G
Sbjct: 946 STLKIPEERAAK-VATKIEKELFSFFRDTDSKYKNKYRSLIFNLKDPKNKILFKRVLKGE 1004
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1005 VTPDHLIRMSPE-------------ELASKELAAWRKRENRHTIE 1036
>gi|410988128|ref|XP_004000340.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein [Felis
catus]
Length = 343
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIF-GAISASKLATMTAEVQTRSADEPMTTFEMAND 157
+YK VRS++ NLK+P P SR + G +S + A T EMA++
Sbjct: 212 KYKTCVRSKVTNLKNPP-PKFSRQSLLSGTMSLREFAETTV-------------VEMAHE 257
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSA 207
++K LR + + I + G TD +KCG C+K NC V TR A
Sbjct: 258 DLKQLRTAYTESRIQEHHFPRAVGGXTDKIKCGSCEKFNCKVT-VVTRGA 306
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 18/165 (10%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLD 71
G +K + +K+E K++K E P+V S D +R R L++ I + L
Sbjct: 888 GEKGSKPGAHEKQEIKKKKSEKGIPNVHVPTTSTSKPSADQIRQSVRHSLKD-ILMRRLT 946
Query: 72 MDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G
Sbjct: 947 ESNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGE 1006
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1007 VTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1038
>gi|324512512|gb|ADY45182.1| Transcription elongation factor A protein 3 [Ascaris suum]
Length = 256
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT-DNRYKNRVRSRIANL 111
+R KC ML M EE+A ++E AI+NE + D++Y++RVRSR+ANL
Sbjct: 136 IREKCIAMLLKC-------MGSSKKAEEIAKKVELAIFNEIGDANDHKYRSRVRSRVANL 188
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAE 139
+NP + + + G IS K A MTAE
Sbjct: 189 --TRNPAIGKQILDGVISPEKFARMTAE 214
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 21/161 (13%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+ + +K+E K++K E P+V +PP S D +R R L++ I + L L
Sbjct: 30 RSGTHEKQETKKKKMEKGGPNV--HPPAATSKPSADQIRQSVRHSLKD-ILMKRLTDSNL 86
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 87 KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 146
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 147 HLIRMSPE-------------ELASKELAAWRRRENRHTIE 174
>gi|339244687|ref|XP_003378269.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
gi|316972840|gb|EFV56486.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
Length = 2283
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 25/158 (15%)
Query: 49 LTDSVRLK---CREMLQNSIQVGDLDMDGLASLEELATELEEAIY--NEFKNTDNRYKNR 103
L DS+R CR M ++ D ++ +++ + ++EE+IY N T+++Y +
Sbjct: 133 LFDSIRSNLNNCRAMFEDC----DANLLNDNNIKTIVQQIEESIYELNGSDETNSKYCSE 188
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
+RS NL + KN L R+ + G I + A MT E EMA +E+K +R
Sbjct: 189 IRSHAMNLCNSKNCQLLRDILTGKILPANFAKMTTE-------------EMAPEEVKNMR 235
Query: 164 NKFIKESIDDAQLATVQGT--KTDLLKCGKCKKRNCTY 199
++S+ + L+ +G+ + C +C +R+C Y
Sbjct: 236 KAVERDSLKEHMLSN-EGSLLHSTTFHCRQCGQRDCNY 272
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 21/161 (13%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+ + +K+E K++K E P+V +PP S D +R R L++ I + L L
Sbjct: 871 RSGTHEKQETKKKKMEKGGPNV--HPPAATSKPSADQIRQSVRHSLKD-ILMKRLTDSNL 927
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 928 KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 987
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 988 HLIRMSPE-------------ELASKELAAWRRRENRHTIE 1015
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 21/161 (13%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+ + +K+E K++K E P+V +PP S D +R R L++ I + L L
Sbjct: 871 RSGTHEKQETKKKKMEKGGPNV--HPPAATSKPSADQIRQSVRHSLKD-ILMKRLTDSNL 927
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 928 KIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 987
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 988 HLIRMSPE-------------ELASKELAAWRRRENRHTIE 1015
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 87 EAIYNEFKNTDNR---YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
E+ N+ N D YK R R +N+ NP L G I+ LAT A+
Sbjct: 48 ESEMNKVNNCDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAK---- 103
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
++A +K + K+++ +AQ AT++ + TD CGKCK++ +Y Q+Q
Sbjct: 104 ---------DLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQ 154
Query: 204 TRSADEPMTTL 214
TRSA P+TT
Sbjct: 155 TRSAAAPLTTF 165
>gi|407860299|gb|EKG07322.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 64 SIQVGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPM 118
S +G M G A EE LA + AI + + + R + NL+D KN
Sbjct: 89 SALIGSALMQGRAKEEEEKINALALRIVTAIPGDRSLAADGF----RVLLVNLRDAKNTK 144
Query: 119 LSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM-KTLRNKFIKES--IDDAQ 175
L + I G + L M+ ++ N E K +F+K S D ++
Sbjct: 145 LREDIIEGRLPVEVLVHMSER-------------DLLNPEARKNQEEEFLKRSRDTDLSE 191
Query: 176 LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TK+ L +C CK R+C++ Q QTRSADEPMT
Sbjct: 192 IRRAMATKSTLFQCPSCKARDCSWTQKQTRSADEPMTVF 230
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK-SHNLTDSVRLKCREMLQNSIQV 67
A G + + +K+E K++K E P+V +PP S D +R R L++ I +
Sbjct: 154 ASTGERVARSGTHEKQETKKKKMEKGGPNV--HPPAATSKPSADQIRQSVRHSLKD-ILM 210
Query: 68 GDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNY 123
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L +
Sbjct: 211 KRLTDSNLKIPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKV 270
Query: 124 IFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 271 LKGEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 306
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 8 PAPPGISNNKDS----SSKKKEAKEEKKEDKKPSVTQY----PPQKSHNLTDSVRLKCRE 59
PA P +N + SS A E +VT+ P Q S + VRL R+
Sbjct: 935 PAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPS---IEPVRLNVRK 991
Query: 60 MLQNSI-----QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDP 114
+L++++ + DL + G + +A +EE ++ F++T RYK++ RS + N+KD
Sbjct: 992 VLRDALLNRCKEASDLSLSG-DEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDS 1050
Query: 115 KNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR---NKFIKESI 171
+N L R + G I+ +L MT E E+A+ E+ R NK E I
Sbjct: 1051 RNQGLFRKILRGKIAPDRLVRMTPE-------------ELASKELARWREQENKHTIEMI 1097
Query: 172 DDAQLATVQGTKTDLL 187
Q+ Q + L
Sbjct: 1098 KKEQMEAAQNVSSHAL 1113
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 22/162 (13%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQ------KSHNLTDSVRLKCREMLQNSIQVGDL 70
+ + +K+E K++K E P+V +PP + + SVR +++L + +L
Sbjct: 874 RSGTHEKQETKKKKVEKGGPNV--HPPAAAAIKPSADQIRQSVRHSLKDILMKRLTDSNL 931
Query: 71 DMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISA 130
+ S + +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 932 KIPEEKSAK-VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTP 990
Query: 131 SKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 991 DHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1019
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR +++L ++ DL + + E+A + E +++ FK+TD++YKN+ RS I NL
Sbjct: 630 SVRDSLKDILTQRLKESDLHIS-VERASEVAKKTERELFHLFKDTDHKYKNKYRSLIFNL 688
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
KD KN +L + + G IS + L M+ E E+A+ E+ R + + +I
Sbjct: 689 KDTKNNVLFKRVLKGEISPANLIRMSPE-------------ELASKELAAWRQRENRHTI 735
Query: 172 D 172
+
Sbjct: 736 E 736
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++N F+ TDNRYK++
Sbjct: 845 QPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVGKVALNIEKEMFNLFQVTDNRYKSK 904
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + G IS SKL M E
Sbjct: 905 YRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPE 940
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 8 PAPPGISNNKDS----SSKKKEAKEEKKEDKKPSVTQY----PPQKSHNLTDSVRLKCRE 59
PA P +N + SS A E +VT+ P Q S + VRL R+
Sbjct: 923 PAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPS---IEPVRLNVRK 979
Query: 60 MLQNSI-----QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDP 114
+L++++ + DL + G + +A +EE ++ F++T RYK++ RS + N+KD
Sbjct: 980 VLRDALLNRCKEASDLSLSG-DEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDS 1038
Query: 115 KNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR---NKFIKESI 171
+N L R + G I+ +L MT E E+A+ E+ R NK E I
Sbjct: 1039 RNQGLFRKILRGKIAPDRLVRMTPE-------------ELASKELARWREQENKHTIEMI 1085
Query: 172 DDAQLATVQGTKTDLL 187
Q+ Q + L
Sbjct: 1086 KKEQMEAAQNVSSHAL 1101
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 33/196 (16%)
Query: 8 PAPPGISNNKDS----SSKKKEAKEEKKEDKKPSVTQY----PPQKSHNLTDSVRLKCRE 59
PA P +N + SS A E +VT+ P Q S + VRL R+
Sbjct: 935 PAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPS---IEPVRLNVRK 991
Query: 60 MLQNSI-----QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDP 114
+L++++ + DL + G + +A +EE ++ F++T RYK++ RS + N+KD
Sbjct: 992 VLRDALLNRCKEASDLSLSG-DEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDS 1050
Query: 115 KNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR---NKFIKESI 171
+N L R + G I+ +L MT E E+A+ E+ R NK E I
Sbjct: 1051 RNQGLFRKILRGKIAPDRLVRMTPE-------------ELASKELARWREQENKHTIEMI 1097
Query: 172 DDAQLATVQGTKTDLL 187
Q+ Q + L
Sbjct: 1098 KKEQMEAAQNVSSHAL 1113
>gi|71414282|ref|XP_809248.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70873602|gb|EAN87397.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 64 SIQVGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPM 118
S +G M G A EE LA + AI + + + R + NL+D KN
Sbjct: 89 SALIGSALMQGRAKEEEEQINALALRIVTAIPGDRSLAADGF----RVLLVNLRDAKNTK 144
Query: 119 LSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM-KTLRNKFIKES--IDDAQ 175
L + I G + L M+ ++ N E K +F+K S D ++
Sbjct: 145 LREDIIEGRLPVEVLVHMSER-------------DLLNPEARKNQEEEFLKRSRDTDLSE 191
Query: 176 LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TK+ L C CK R+C++ Q QTRSADEPMT
Sbjct: 192 IRRAMATKSTLFPCPSCKARDCSWTQKQTRSADEPMTVF 230
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 23/140 (16%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFK 94
T +P + S D RL +++L ++ +D + + + + LA++LE+AI+++F+
Sbjct: 2022 TLFPGEASAR--DKSRLFLQKVLMAGMKTFGMDHNSTSEVHDFCAMLASDLEQAIFDKFR 2079
Query: 95 N----TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMT 150
+ N Y+++VRS NL+DPKNPML + G + S+L M+ SAD
Sbjct: 2080 SPHDSISNEYRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIVMS------SAD---- 2129
Query: 151 TFEMANDEMKTLRNKFIKES 170
+A+ E+K +R + +E+
Sbjct: 2130 ---LASKELKQIRQQVQEEA 2146
>gi|71657176|ref|XP_817107.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70882278|gb|EAN95256.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 64 SIQVGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPM 118
S +G M G A EE LA + AI + + + R + NL+D KN
Sbjct: 89 SALIGGALMQGRAKEEEERINALALRIVTAIPGDRSLAADGF----RVLLVNLRDSKNTK 144
Query: 119 LSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM-KTLRNKFIKES--IDDAQ 175
L + I G + L M+ ++ N E K +F+K S D ++
Sbjct: 145 LREDIIEGRLPVEVLVHMSER-------------DLLNPEARKNQEEEFLKRSKDTDLSE 191
Query: 176 LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TK+ L C CK R+C++ Q QTRSADEPMT
Sbjct: 192 IRRAMATKSTLFPCPSCKARDCSWTQKQTRSADEPMTVF 230
>gi|407425373|gb|EKF39382.1| transcription elongation factor, putative [Trypanosoma cruzi
marinkellei]
Length = 287
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 64 SIQVGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPM 118
S + D M G A EE LA + AI + + + R + NL+D KN
Sbjct: 133 SALISDALMHGRAKEEEDRINALALRIVTAIPGDRSVAADGF----RVLLVNLRDAKNTK 188
Query: 119 LSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM-KTLRNKFIKES--IDDAQ 175
L + I G + L M+ ++ N E K+ +F+K S D +
Sbjct: 189 LREDIIEGRLPVELLVHMSER-------------DLLNPEARKSQEEEFLKRSKDTDLTE 235
Query: 176 LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ TK+ L C CK R+C++ Q QTRSADEPMT
Sbjct: 236 IRRAMATKSTLFSCPSCKARDCSWTQKQTRSADEPMTVF 274
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++N F+ TDNRYK+R
Sbjct: 658 QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTESEVGKIALHIEKEMFNLFQVTDNRYKSR 717
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NLKDPKN L + IS++KL M E E+A+ E+ T R
Sbjct: 718 YRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPE-------------ELASKELSTWR 764
Query: 164 NKFIKESID 172
+ K ++
Sbjct: 765 ERPAKPVLE 773
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHN--LTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E K + +PP S + D +R R L++ I +
Sbjct: 887 GEKASKSGTHEKQEMKKKKVE--KGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKR 943
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + +
Sbjct: 944 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLK 1003
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1004 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1037
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHN--LTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E K + +PP S + D +R R L++ I +
Sbjct: 887 GEKASKSGTHEKQEMKKKKVE--KGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKR 943
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + +
Sbjct: 944 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLK 1003
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1004 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1037
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHN--LTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E K + +PP S + D +R R L++ I +
Sbjct: 887 GEKASKSGTHEKQEMKKKKVE--KGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKR 943
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + +
Sbjct: 944 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLK 1003
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1004 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1037
>gi|340058665|emb|CCC53025.1| putative transcription elongation factor [Trypanosoma vivax Y486]
Length = 230
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAN-DEMKTLR 163
R + N++D KN L + I G + L M E+ N +E K
Sbjct: 118 RVLLVNIRDTKNEELRSDIIEGRLPVEVLVRMNER-------------ELLNPEERKNQE 164
Query: 164 NKFIKES--IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
F++ S D ++ TK+ L +C CK R+C++ Q QTRSADEPMT H +
Sbjct: 165 AAFLERSKDTDLTEIRRAMATKSTLFQCPSCKARDCSWTQKQTRSADEPMTVFCHCNV 222
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++N F TDNRYK++
Sbjct: 758 QPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVGKVALNIEKEMFNLFHVTDNRYKSK 817
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + G IS SKL M E
Sbjct: 818 YRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPE 853
>gi|322510696|gb|ADX06010.1| putative transcription factor TFIIS_C family protein [Organic Lake
phycodnavirus 1]
Length = 168
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K +D+ ++ + TD KCGKCK + CTY Q+QTRSADEPMTT
Sbjct: 111 KTRVDNKYFPKIKAS-TDKFKCGKCKSKECTYYQLQTRSADEPMTTF 156
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHN--LTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E K + +PP S + D +R R L++ I +
Sbjct: 1012 GEKASKPGTHEKQEMKKKKVE--KGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKR 1068
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
L L EE +AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + +
Sbjct: 1069 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLK 1128
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1129 GEVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1162
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+L + EAI + + T + ++ + + N+KD KN L R + G + +L TM
Sbjct: 199 DLCVRIVEAIPGDMEQTKDTFQ----TLLFNIKDSKNGELRRKVMEGELLVERLVTM--- 251
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----GTKTDLLKCGKCKKR 195
D+ E+AN E++ + I+E D L+ ++ + + L KC C R
Sbjct: 252 ------DD----LELANPELRKHIEEKIEERSKDTNLSEIRKAMRTSNSTLFKCRVCGAR 301
Query: 196 NCTYNQVQTRSADEPMTTL 214
+ ++ Q QTRS DEPMT +
Sbjct: 302 DSSWEQRQTRSGDEPMTVI 320
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKK-PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDL 70
G K +K+E K++K E P+V +P S D +R + L++ I + L
Sbjct: 884 GEKTTKSGIHEKQELKKKKMEKAGLPNVHTHPAPTSKPSADQIRQSVKHSLKD-ILMKRL 942
Query: 71 DMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G
Sbjct: 943 TDSNLKIPEERAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1002
Query: 127 AISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1003 EVTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1035
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+L + EAI + + T + ++ + + N+KD KN L R + G + +L TM
Sbjct: 199 DLCVRIVEAIPGDMEQTKDTFQ----TLLFNIKDSKNGELRRKVMEGELLVERLVTM--- 251
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----GTKTDLLKCGKCKKR 195
D+ E+AN E++ + I+E D L+ ++ + + L KC C R
Sbjct: 252 ------DD----LELANPELRKHIEEKIEERSKDTNLSEIRKAMRTSNSTLFKCRVCGAR 301
Query: 196 NCTYNQVQTRSADEPMTTL 214
+ ++ Q QTRS DEPMT +
Sbjct: 302 DSSWEQRQTRSGDEPMTVI 320
>gi|322511107|gb|ADX06420.1| putative transcription elongation factor TFIIS_C domain-containing
protein [Organic Lake phycodnavirus 2]
Length = 168
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+D+ ++ + TD KCGKCK + CTY Q+QTRSADEPMTT
Sbjct: 114 LDNKYFPKIKAS-TDKFKCGKCKSKECTYYQLQTRSADEPMTTF 156
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 21/139 (15%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+L + EAI + + T + ++ + + N+KD KN L R + G + +L TM
Sbjct: 203 DLCVRIVEAIPGDMEQTKDTFQ----TLLFNIKDTKNGELRRKVMEGELLVERLVTM--- 255
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----GTKTDLLKCGKCKKR 195
D+ E+AN E++ + I+E D L+ ++ + + L KC C R
Sbjct: 256 ------DD----LELANPELRRHIEEKIEERSKDTNLSEIRKAMRTSNSTLFKCRVCGAR 305
Query: 196 NCTYNQVQTRSADEPMTTL 214
+ ++ Q QTRS DEPMT +
Sbjct: 306 DSSWEQRQTRSGDEPMTVI 324
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 21/138 (15%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
L + E+I + + T + ++ + + N+KD KN L R + G + +L TM
Sbjct: 200 LCVRIVESIPGDMEQTKDTFQ----TLLFNIKDSKNGELRRKVVEGELLVERLVTM---- 251
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----GTKTDLLKCGKCKKRN 196
D+ E+AN E++ + I+E D L+ ++ + + L KC C R+
Sbjct: 252 -----DD----LELANPELRKHIEEKIEERSKDTNLSEIRKAMRTSNSTLFKCRVCGARD 302
Query: 197 CTYNQVQTRSADEPMTTL 214
++ Q QTRS DEPMT +
Sbjct: 303 SSWEQRQTRSGDEPMTVI 320
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 25/155 (16%)
Query: 29 EKKEDKKPSVTQ-----YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE- 80
EK+E KK V + +PP S + D +R R L++ I + L L EE
Sbjct: 897 EKQEMKKKKVEKGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEK 955
Query: 81 ---LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + + G ++ L M+
Sbjct: 956 AAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMS 1015
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E E+A+ E+ R + + +I+
Sbjct: 1016 PE-------------ELASKELAAWRRRENRHTIE 1037
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYK 101
P Q + + ++R +E+L + D + + + +A +E+ ++N F+ TDNRYK
Sbjct: 628 PSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTESEVGRVALRIEKELFNLFRVTDNRYK 687
Query: 102 NRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++ RS + NLKDPKN L + IS +KL M E
Sbjct: 688 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 725
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 67 VGDLDMDGLASLEEL-------ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPML 119
+G + DG SLE+L A E+E ++ F + +YK + RS + NLKD NP L
Sbjct: 300 IGAMANDG--SLEKLLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKL 357
Query: 120 SRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATV 179
++G I+A +L +M+AE E+A+ E+ R +E AQ+ +
Sbjct: 358 REKVMYGEIAAERLCSMSAE-------------ELASKELAEWRQAKAEEM---AQMVVL 401
Query: 180 QGTKTDL 186
Q T+ D+
Sbjct: 402 QDTEVDI 408
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 16 NKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+K + +++E K++K E P+V P S D +R R L++ I + L L
Sbjct: 896 SKSGAHERQEMKKKKIEKGVPNVPP-PASTSKPSADQIRQSVRHSLKD-ILMKRLTDSNL 953
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ ++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 954 KVPEEKAAKVATKIEKELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1013
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 1014 HLIRMSPE-------------ELASKELAAWRRRENRHTIE 1041
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 25/155 (16%)
Query: 29 EKKEDKKPSVTQ-----YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE- 80
EK+E KK V + +PP S + D +R R L++ I + L L EE
Sbjct: 898 EKQEMKKKKVEKGVLNVHPPAASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEK 956
Query: 81 ---LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+AT++E+ +++ F++TD++YKN+ RS + NLKDPKN +L + + G ++ L M+
Sbjct: 957 AAKVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMS 1016
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E E+A+ E+ R + + +I+
Sbjct: 1017 PE-------------ELASKELAAWRRRENRHTIE 1038
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 67 VGDLDMDGLASLEEL-------ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPML 119
+G + DG SLE+L A E+E ++ F + +YK + RS + NLKD NP L
Sbjct: 300 IGAMANDG--SLEKLLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKL 357
Query: 120 SRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATV 179
++G I+A +L +M+AE E+A+ E+ R +E AQ+ +
Sbjct: 358 REKVMYGEIAAERLCSMSAE-------------ELASKELAEWRQAKAEEM---AQMVVL 401
Query: 180 QGTKTDL 186
Q T+ D+
Sbjct: 402 QDTEVDI 408
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+AQ AT++ + TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 269 NAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTF 310
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 41 YPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKN 95
+PP S D +R R L++ I + L L EE +AT++E+ +Y+ F++
Sbjct: 825 HPPASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELYSFFRD 883
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+A
Sbjct: 884 TDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELA 930
Query: 156 NDEMKTLRNKFIKESID 172
+ E+ R + + +I+
Sbjct: 931 SKELAAWRRRENRHTIE 947
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 41 YPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKN 95
+PP S D +R R L++ I + L L EE +AT++E+ +Y+ F++
Sbjct: 825 HPPASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELYSFFRD 883
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+A
Sbjct: 884 TDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELA 930
Query: 156 NDEMKTLRNKFIKESID 172
+ E+ R + + +I+
Sbjct: 931 SKELAAWRRRENRHTIE 947
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 41 YPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKN 95
+PP S D +R R L++ I + L L EE +AT++E+ +Y+ F++
Sbjct: 913 HPPASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELYSFFRD 971
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+A
Sbjct: 972 TDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELA 1018
Query: 156 NDEMKTLRNKFIKESID 172
+ E+ R + + +I+
Sbjct: 1019 SKELAAWRRRENRHTIE 1035
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 67 VGDLDMDGLASLEEL-------ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPML 119
+G + DG SLE+L A E+E ++ F + +YK + RS + NLKD NP L
Sbjct: 249 IGAMANDG--SLEKLLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKL 306
Query: 120 SRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATV 179
++G I+A +L +M+AE E+A+ E+ R +E AQ+ +
Sbjct: 307 REKVMYGEIAAERLCSMSAE-------------ELASKELAEWRQAKAEEM---AQMVVL 350
Query: 180 QGTKTDL 186
Q T+ D+
Sbjct: 351 QDTEVDI 357
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 41 YPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKN 95
+PP S D +R R L++ I + L L EE +AT++E+ +Y+ F++
Sbjct: 913 HPPASASKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELYSFFRD 971
Query: 96 TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMA 155
TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+A
Sbjct: 972 TDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELA 1018
Query: 156 NDEMKTLRNKFIKESID 172
+ E+ R + + +I+
Sbjct: 1019 SKELAAWRRRENRHTIE 1035
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 16 NKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
+K + +++E K++K E P+V P S D +R R L++ I + L L
Sbjct: 808 SKSGAHERQEMKKKKIEKGVPNVPP-PASTSKPSADQIRQSVRHSLKD-ILMKRLTDSNL 865
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT++E+ ++ F++TD +YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 866 KVPEEKAAKVATKIEKELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 925
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 926 HLIRMSPE-------------ELASKELAAWRRRENRHTIE 953
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 16 NKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
++DS+ K K E K+ K V+ P H + SVR E+L + DL +
Sbjct: 770 SEDSAQKGPNVKHETKKVKISPVSSKKPSTGH-IRRSVRDSLEEILLKRSKESDLKISSD 828
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
E +A E+ ++ F+ D++YKN+ RS NLKD KN +L + + G +S + L
Sbjct: 829 RPAE-VARRTEKELFALFQGVDSKYKNKYRSLTFNLKDAKNNVLFKRVLKGEVSPADLVR 887
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
MTAE E+A+ E+ R + + +I+
Sbjct: 888 MTAE-------------ELASKELAAWRKRENRHTIE 911
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+AQ AT++ + TD CGKCK++ +Y Q+QTRSADEP+TT
Sbjct: 253 NAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTF 294
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 674 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 729
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 730 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 775
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 116 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 171
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 172 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 217
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 711
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 712 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 757
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLD 71
G +K + +K+E K++K E +V + D +R R L++ I + L
Sbjct: 891 GEKASKLGAHEKQEVKKKKAEKGVANVHPPAAAAAKPSADQIRQSVRHSLKD-ILMKRLT 949
Query: 72 MDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G
Sbjct: 950 DSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGE 1009
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 1010 VTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 1041
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 22/126 (17%)
Query: 48 NLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFK-NTDNRYKNRVRS 106
+L +++ +C+E D++ D A +E++A E+EE++++ +K + ++YKN+ RS
Sbjct: 1715 SLKEALWSRCKE-------ANDVETDE-AIVEQVAKEIEESLFSLYKHDVGSKYKNKYRS 1766
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
I N+KDPKNP L R I + +L M+ E ++AN ++ R K
Sbjct: 1767 LIFNIKDPKNPGLFREIITKQLLPDELVKMSTE-------------DLANKDLAEWREKE 1813
Query: 167 IKESID 172
K +D
Sbjct: 1814 AKHQLD 1819
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 41 YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFK 94
+PP S + D +R R L++ I + L L EE +AT++E+ +++ F+
Sbjct: 916 HPPAASTSKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFR 974
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+
Sbjct: 975 DTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPE-------------EL 1021
Query: 155 ANDEMKTLRNKFIKESID 172
A+ E+ R + + +I+
Sbjct: 1022 ASKELAAWRRRENRHTIE 1039
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++N F+ TDNRYK++
Sbjct: 683 QPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVGKVALNIEKEMFNLFQGTDNRYKSK 742
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + IS SKL M E
Sbjct: 743 YRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPE 778
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 22 KKKEAKEEKKEDKKPSVTQYP-PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE 80
+K+E K++K E S T P S D +R ++ L+ I + L L EE
Sbjct: 903 EKQEIKKKKNEKGPTSATHLPNVPASKPSADQIRHSVKQSLKE-ILMKRLTDSSLKIPEE 961
Query: 81 ----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+AT +E +++ F++TD++YKN+ RS + NLKDPKN +L + + G ++ L M
Sbjct: 962 RAAKVATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKM 1021
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ E E+A+ E+ R + + +I+
Sbjct: 1022 SPE-------------ELASKELAAWRQRENRHTIE 1044
>gi|342185610|emb|CCC95094.1| putative transcription elongation factor [Trypanosoma congolense
IL3000]
Length = 207
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 16/139 (11%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
EE + + + + + + R + ++ D KN L + I G +S L M
Sbjct: 69 EERVSGVAQRVVEAIPGGRSESADTFRVLLVHMGDAKNEKLRESIIEGVLSVETLVRMKE 128
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ---GTKTDLLKCGKCKKR 195
E+ N E + + E D L+ ++ T + L C CK R
Sbjct: 129 S-------------ELLNPEERMKQEAAFLERCKDTDLSEIRKATSTTSTLFPCPSCKAR 175
Query: 196 NCTYNQVQTRSADEPMTTL 214
NC+++Q QTRSADEPMT
Sbjct: 176 NCSWSQKQTRSADEPMTVF 194
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ TD
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVGKIALHIEKEMFNLFQVTD 715
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NR+K++ RS + NLKDPKN L + IS +KL M E
Sbjct: 716 NRFKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 757
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 16/106 (15%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA E+E ++ F + +YK + RS + N KD NP L ++G I+A +L +M+AE
Sbjct: 300 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSMSAE- 358
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E+A+ E+ R +E AQ+ +Q T+ D+
Sbjct: 359 ------------ELASKELAEWRQAKAEEM---AQMVVLQDTEVDI 389
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 34 KKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEF 93
K PS P + SVR +E+L ++ +L + + ++A ++E +++
Sbjct: 641 KPPSSATKKPVSVEAIRRSVRDSLKEILIQRLKESNLSI-SVEKASDVAKKIERELFHLN 699
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
K+TDN+YKN+ RS + NLKD KN +L + + G IS L M+ E E
Sbjct: 700 KDTDNKYKNKYRSLMFNLKDTKNNVLYKKVLKGEISPGNLIRMSPE-------------E 746
Query: 154 MANDEMKTLRNKFIKESID 172
+A+ E+ R + + +I+
Sbjct: 747 LASKELAAWRKRENRHTIE 765
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 659 VSSAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 714
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 715 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 760
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLA----SLEELATELEEAIYNEFKNTDNRYKNRVRSRI 108
VR+ R++L++S+ D D ++ ++ +A +EE ++ FK+T +YK++ RS +
Sbjct: 812 VRINVRKVLRDSLSNRCKDADDISLSGDEVKRMAVRIEEELFKYFKDTGTKYKSKYRSLV 871
Query: 109 ANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
N+KD +N L R + G I+ KL MT E
Sbjct: 872 FNIKDTRNQGLFRKILKGKIAPDKLVRMTPE 902
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 499 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 554
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 555 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 600
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 711
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 712 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 757
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 658 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 713
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 714 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 759
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYN 91
P+V P S D +R + L++ I + L L EE +AT++E+ +++
Sbjct: 901 PNVHAPPTPASKPSADQIRQSVKHSLKD-ILMKRLTDSNLKIPEERASKVATKIEKELFS 959
Query: 92 EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTT 151
F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 960 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE------------ 1007
Query: 152 FEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 1008 -ELASKELAAWRRRENRHTIE 1027
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE 80
+K+E K++K E S T P S D +R ++ L+ I + L L EE
Sbjct: 927 EKQEIKKKKNEKGSISATHLPAVPASKPSADQIRQSVKQSLKE-ILMKRLTDSSLKIPEE 985
Query: 81 ----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+AT +E +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M
Sbjct: 986 RAAKVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKM 1045
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ E E+A+ E+ R + + +I+
Sbjct: 1046 SPE-------------ELASKELAAWRQRENRHTIE 1068
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEF 93
V+ P Q + + ++R +E+L + D D L E ++A +E+ ++N F
Sbjct: 499 VSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLF 554
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 555 QVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 600
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 22/167 (13%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQ------KSHNLTDSVRLKCREMLQNSI 65
G +K + +K+E K++K E +V +PP ++ + SVR +++L +
Sbjct: 1040 GEKTSKPGTHEKQEIKKKKVEKGVANV--HPPAATTSKPSANQIRQSVRHSLKDILMKRL 1097
Query: 66 QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIF 125
+L + + + +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + +
Sbjct: 1098 TDSNLKVPEEKAAK-VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLK 1156
Query: 126 GAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
G ++ L M E E+A+ E+ R + + +I+
Sbjct: 1157 GEVTPDHLIRMNPE-------------ELASKELAAWRRRENRHTIE 1190
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 41 YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFK 94
+PP S + D +R R L++ I + L L EE +AT++E+ +++ F+
Sbjct: 947 HPPATSTSKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFR 1005
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+
Sbjct: 1006 DTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------EL 1052
Query: 155 ANDEMKTLRNKFIKESID 172
A+ E+ R + + +I+
Sbjct: 1053 ASKELAAWRRRENRHTIE 1070
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 78 LEELATELEEAIYNEFKNTDN----RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKL 133
L E LE+A+ F ++ N Y+ R NL+ KN L +++FG + + KL
Sbjct: 73 LLEHIVGLEDALSAAFNSSPNDITPNYRQHFRDIRFNLE--KNRQLLGDWLFGELESKKL 130
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTK-----TDLLK 188
A+MTAE EM +D+++ R IKE + +A T + K
Sbjct: 131 ASMTAE-------------EMMSDDVRKERET-IKEEMFEAYQTDWYKTHMMNKLSGGFK 176
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTL 214
C +C Y Q QTRSADEPMT
Sbjct: 177 CRRCGSDKTQYMQKQTRSADEPMTVF 202
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
+S+ L ++E++++ F T+ +YKNR RS + NLKD +N L R I G ++ S+L
Sbjct: 799 SSITRLVDKIEDSLHKLFGETNVKYKNRYRSIMFNLKDERNHGLWRKVIIGDVTTSELVQ 858
Query: 136 MTAE 139
MTAE
Sbjct: 859 MTAE 862
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 41 YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFK 94
+PP S + D +R R L++ I + L L EE +AT++E+ +++ F+
Sbjct: 916 HPPATSTSKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFR 974
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+
Sbjct: 975 DTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------EL 1021
Query: 155 ANDEMKTLRNKFIKESID 172
A+ E+ R + + +I+
Sbjct: 1022 ASKELAAWRRRENRHTIE 1039
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 19/161 (11%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL 75
K + +K+E K++K E S P S D +R ++ L+ I + L L
Sbjct: 898 KSGAHEKQEIKKKKNEKGPVSAAHLPTVPASKPSADQIRHSVKQSLKE-ILMKRLTDSSL 956
Query: 76 ASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
EE +AT +E +++ F++TD++YKN+ RS + NLKDPKN +L + + G ++
Sbjct: 957 KIPEERAAKVATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1016
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
L M+ E E+A+ E+ R + + +I+
Sbjct: 1017 HLIKMSPE-------------ELASKELAAWRQRENRHTIE 1044
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 12 GISNNKDSSSKKKEAKEEKKE----DKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
G +K + +K+E K++K E + P+ + P + + SVR +++L +
Sbjct: 156 GEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPS-ADQIRQSVRHSLKDILMKRLTD 214
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
+L + + + +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G
Sbjct: 215 SNLKVPEEKAAK-VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGE 273
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ L M+ E E+A+ E+ R + + +I+
Sbjct: 274 VTPDHLIRMSPE-------------ELASKELAAWRRRENRHTIE 305
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE 80
+K+E K++K E S T P S D +R ++ L+ I + L L EE
Sbjct: 910 EKQEIKKKKNEKGSISATHLPAVPASKPSADQIRQSVKQSLKE-ILMKRLTDSSLKIPEE 968
Query: 81 ----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+AT +E +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M
Sbjct: 969 RAAKVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKM 1028
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ E E+A+ E+ R + + +I+
Sbjct: 1029 SPE-------------ELASKELAAWRQRENRHTIE 1051
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 41 YPPQKSHN--LTDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFK 94
+PP S + D +R R L++ I + L L EE +AT++E+ +++ F+
Sbjct: 861 HPPATSTSKPSADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFR 919
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E E+
Sbjct: 920 DTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------EL 966
Query: 155 ANDEMKTLRNKFIKESID 172
A+ E+ R + + +I+
Sbjct: 967 ASKELAAWRRRENRHTIE 984
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 194 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 252
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 253 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 299
Query: 167 IKESID 172
+ +I+
Sbjct: 300 NRHTIE 305
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 837 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 895
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 896 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 942
Query: 167 IKESID 172
+ +I+
Sbjct: 943 NRHTIE 948
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 925 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 983
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 984 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 1030
Query: 167 IKESID 172
+ +I+
Sbjct: 1031 NRHTIE 1036
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 925 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 983
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 984 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 1030
Query: 167 IKESID 172
+ +I+
Sbjct: 1031 NRHTIE 1036
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 930 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 988
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 989 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 1035
Query: 167 IKESID 172
+ +I+
Sbjct: 1036 NRHTIE 1041
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 940 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 998
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 999 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 1045
Query: 167 IKESID 172
+ +I+
Sbjct: 1046 NRHTIE 1051
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 973 VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE- 1031
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 1032 ------------ELASKELAAWRRRENRHTIE 1051
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPP-QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE 80
+K+E K++K E S T P S D +R ++ L+ I + L L EE
Sbjct: 822 EKQEIKKKKNEKGSISATHLPAVPASKPSADQIRQSVKQSLKE-ILMKRLTDSSLKIPEE 880
Query: 81 ----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+AT +E +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M
Sbjct: 881 RAAKVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKM 940
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
+ E E+A+ E+ R + + +I+
Sbjct: 941 SPE-------------ELASKELAAWRQRENRHTIE 963
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 870 VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE- 928
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 929 ------------ELASKELAAWRRRENRHTIE 948
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 958 VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE- 1016
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 1017 ------------ELASKELAAWRRRENRHTIE 1036
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRS 106
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ RS
Sbjct: 991 DQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRS 1049
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
+ NLKDPKN +L + + G ++ L M+ E E+A+ E+ R +
Sbjct: 1050 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE-------------ELASKELAAWRRRE 1096
Query: 167 IKESID 172
+ +I+
Sbjct: 1097 NRHTIE 1102
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+AT++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 724 VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE- 782
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 783 ------------ELASKELAAWRRRENRHTIE 802
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ TD
Sbjct: 656 VSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVGKIALHIEKEMFNLFQVTD 715
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NR+K++ RS + NLKDPKN L + IS +KL M E
Sbjct: 716 NRFKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 757
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 25/137 (18%)
Query: 59 EMLQNSIQVGDLDMDG---------LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIA 109
E+LQ + LD+D + S + LA E+E ++ F + +YK + RS +
Sbjct: 359 ELLQGNGLSWALDLDTEVVNEGQKTVQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLF 418
Query: 110 NLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKE 169
NLKD NP L + G IS +L +MTAE E+A+ E+ R I +
Sbjct: 419 NLKDRNNPELRERVVAGEISPERLCSMTAE-------------ELASKELSEWR---IAK 462
Query: 170 SIDDAQLATVQGTKTDL 186
+ + AQ+ + ++ D+
Sbjct: 463 AEELAQMVVLPDSEVDI 479
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TDNR
Sbjct: 701 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR 756
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
YK++ RS + NLKDPKN L + IS +KL M E E+ + E+
Sbjct: 757 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE-------------ELVSKEL 803
Query: 160 KTLRNKFIKESID 172
T + K K I+
Sbjct: 804 STWKEKPTKSMIE 816
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 30 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 85
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 86 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 132
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYK 101
P Q + + ++R +E+L + D + + ++A +E+ ++N F TDNRYK
Sbjct: 662 PSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFHVTDNRYK 721
Query: 102 NRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++ RS + NLKDPKN L + IS +KL M E
Sbjct: 722 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 759
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 30/148 (20%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQ 141
A E+E+AI + + Y +VRS + NLK KN L I G I +L M E
Sbjct: 142 AGEVEDAINSWSRGERKTYTEKVRSLVFNLK--KNGPLREQVILGQIVTEQLPKMPPE-- 197
Query: 142 TRSADEPMTTFEMANDEMKTLRN----------KFIKESIDDAQLATVQGTKTDLLK--- 188
E+A EM RN + E ++ ++ + G K DLLK
Sbjct: 198 -----------ELATAEMNKERNAQAEKLMASRQLDWEKKNEGKINEICGIKGDLLKASL 246
Query: 189 --CGKCKKRNCTYNQVQTRSADEPMTTL 214
CG+CK T Q QTRSADEPMT
Sbjct: 247 FTCGRCKSTKTTSTQKQTRSADEPMTVF 274
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 694 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 753
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 754 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 796
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 717
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 718 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 657 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 716
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 717 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 759
>gi|440295289|gb|ELP88202.1| transcription elongation factor S-II, putative [Entamoeba invadens
IP1]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSAD 208
M ++E+A+DE+K L+N+ +K+ D + + C KC R QVQ RSAD
Sbjct: 90 MNSYELADDEVKKLKNRVMKDEEDKKKPLDISKIPDHEFSCPKCSSRKIQETQVQLRSAD 149
Query: 209 EPMTTL 214
EPMT +
Sbjct: 150 EPMTRI 155
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 717
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 718 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 717
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 718 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 655 AMSAAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVGKIALHIEKEMFNLFQVT 714
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 715 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 757
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 717
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 718 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 667 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 726
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 727 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 769
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + ++A +E+ ++N F+ TDNRYK++
Sbjct: 664 QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKELFNLFQVTDNRYKSK 723
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
RS + NLKDPKN L + IS +KL M E E+ + E+ T R
Sbjct: 724 YRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE-------------ELVSKELSTWR 770
Query: 164 NKFIKESID 172
+ K +++
Sbjct: 771 ERPTKPAME 779
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTD 97
P Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TD
Sbjct: 666 PSQPNSQIRQNIRRSLKEILWKRVS----DSDDLIMTENEVGKIALHIEKEMFNLFRVTD 721
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 722 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 763
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 654 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVGKVALHIEKEMFNLFQVT 713
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 714 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 756
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 655 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 714
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 715 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 757
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 655 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 714
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 715 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 757
>gi|1839468|gb|AAB47105.1| SII-T1=testis-specific transcription elongation factor S-II [mice,
ddY, testes, Peptide Partial, 111 aa]
Length = 111
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 36 PSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA---SLEELATELEEAIYNE 92
P +T +P + D+VR KCREML ++Q D D +A + E L++++EE I+ +
Sbjct: 44 PRITTFP--QVPITCDAVRNKCREMLTLALQT---DHDHVAVGVNCEHLSSQIEECIFLD 98
Query: 93 FKNTDNRYKNRVR 105
NTD +YKNRVR
Sbjct: 99 VGNTDMKYKNRVR 111
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVR 105
D +R R L++ I + L L EE +AT++E+ +++ F++TD +YKN+ R
Sbjct: 9 ADQIRQSVRHSLKD-ILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYR 67
Query: 106 SRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
S + NLKDPKN +L + + G ++ L M+ E
Sbjct: 68 SLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 101
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+ + P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 661 ATSPAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 716
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 717 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 763
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 692 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 747
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 748 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 794
>gi|444520653|gb|ELV13035.1| PHD finger protein 3 [Tupaia chinensis]
Length = 1690
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 12 GISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK--SHNLTDSVRLKCREMLQNSIQVGD 69
G +K + +K+E K++K E P+V +PP S TD +R R L++ I +
Sbjct: 601 GEKTSKPGTHEKQEMKKKKVEKGVPNV--HPPAAAASKPSTDQIRQSVRHSLKD-ILMKR 657
Query: 70 LDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKN 116
L L EE +AT++E+ +++ F++TD +YKN+ RS + NLKDPKN
Sbjct: 658 LTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKN 708
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 713
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 694 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 749
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 750 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 796
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 713
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 655 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 710
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 711 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 757
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+++ P Q + + ++R +E+L + D D L E ++A +E+ ++N
Sbjct: 658 AMSAAPSQPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNL 713
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
F+ TDNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 760
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TDNR
Sbjct: 703 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR 758
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
YK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 759 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 798
>gi|290994184|ref|XP_002679712.1| predicted protein [Naegleria gruberi]
gi|284093330|gb|EFC46968.1| predicted protein [Naegleria gruberi]
Length = 116
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 149 MTTFEMANDEMKTLRNKFIKE-SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSA 207
M +MA+ E K N ++E + ++ +A ++ + +CGKCKK CT+ ++QTRSA
Sbjct: 39 MKVQDMASKE-KQKENALLQERKLHNSMVAKPAAVESSMFRCGKCKKTQCTFYEMQTRSA 97
Query: 208 DEPMTTL 214
DEPMT
Sbjct: 98 DEPMTAF 104
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 654 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVGKVALHIEKEMFNLFQVT 713
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
DNRYK++ RS + NLKDPKN L + IS +KL + E
Sbjct: 714 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPE 756
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
L +E ++N F+NTD++Y N+ R+ + NLKDP+N L ++ G IS +L MT
Sbjct: 2144 LVASIEVEMFNIFRNTDSKYMNKYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMT 2200
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA +EE ++ F + +YK R RS + NLKD NP L + G I+ +L +MTA
Sbjct: 348 ESLALRIEEELFKLFGGVNKKYKERGRSLLFNLKDKSNPELRVRVLSGDIAPERLCSMTA 407
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E E+A+ E+ R + ++ + A++ + T+ D+
Sbjct: 408 E-------------ELASKELSEWR---LAKAEEHAKMVVLPNTEVDV 439
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 7 FPAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSH-----NLTDSVRLKCREML 61
+P PG S K E +E ++D Q PQ+ + ++V +E+L
Sbjct: 520 WPECPG------SVPVKAEEEEPGEQDGGEDSAQLQPQQEKLSLDVGVRNTVVHAMQEVL 573
Query: 62 QNSIQ-VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLS 120
++ +Q + DL + A +E +A +E A++N + T RYK + RS + NL+DP+NP L
Sbjct: 574 RSRLQELPDLVLSEEA-VEGIAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLF 632
Query: 121 RNYIFGAISASKLATMTA 138
+ G ++ L M++
Sbjct: 633 LKVVRGDVTPEDLVQMSS 650
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
+A ++E+ +++ F++TD +YKN+ RS + NLKDPKN +L + + G ++ L M+ E
Sbjct: 115 VAMKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE- 173
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
E+A+ E+ R + + +I+
Sbjct: 174 ------------ELASKELAAWRRRENRHTIE 193
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
EL + EAI + + + K+ ++ + ++KD KN L R + G + +L TM
Sbjct: 195 ELCMRIVEAIPGDTE----QIKDTFQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDR 250
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQ----GTKTDLLKCGKCKKR 195
E+AN E++ + ++E D L+ ++ + + L KC C R
Sbjct: 251 -------------ELANPELRKQIEEKMEERSKDTNLSEIRKAMRTSNSTLFKCHVCGAR 297
Query: 196 NCTYNQVQTRSADEPMTTL 214
+ ++ Q QTRS DEPMT +
Sbjct: 298 DSSWEQRQTRSGDEPMTVI 316
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 20/151 (13%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQ-VGDLDMDGLASLEELATELEEAIYNEFKNTDNRY 100
P K N+ D+V+ E L N ++ V DL + L+ ++ E+E +Y F +T +Y
Sbjct: 814 PQAKQENIRDNVKKTVYEQLTNRLKMVDDLKL-SEEELKNISLEIESQLYKCFGDTGQKY 872
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMK 160
+N+ RS I N+KD KN L R I+ +L ++ + ++A+ E+
Sbjct: 873 RNKYRSLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPD-------------DLASQELA 919
Query: 161 TLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
R + K QL ++ ++ +LL+C +
Sbjct: 920 LWRERETKH-----QLDMIKKSELELLQCNR 945
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 21/136 (15%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNE 92
+ + P Q + + ++R +E+L + D D L E +A +E+ +++
Sbjct: 664 AASPAPSQPNSQIRQNIRRSLKEILWKRVS----DSDDLIMTENEVGRVALRIEKEMFSL 719
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTF 152
F+ TDNRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 720 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE------------- 766
Query: 153 EMANDEMKTLRNKFIK 168
E+A+ E+ T + + K
Sbjct: 767 ELASKELSTWKERPAK 782
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TDNR
Sbjct: 670 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR 725
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
YK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 726 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 765
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ Q + + ++R +E+L + D + + ++A +E+ ++N F+ TD
Sbjct: 661 VSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALLIEKEMFNLFRVTD 720
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 721 NRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 762
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
+ S + LA E+E ++ F + +YK + RS + NLKD NP L + G IS +L
Sbjct: 402 VQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLC 461
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
+MTAE E+A+ E+ R I ++ + AQ+ + ++ D+
Sbjct: 462 SMTAE-------------ELASKELSEWR---IAKAEELAQMVVLPDSEVDI 497
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ Q + + ++R +E+L + D + + ++A +E+ ++N F+ TD
Sbjct: 661 VSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALLIEKEMFNLFRVTD 720
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 721 NRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 762
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTD 97
V+ Q + + ++R +E+L + D + + ++A +E+ ++N F+ TD
Sbjct: 661 VSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALLIEKEMFNLFRVTD 720
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
NRYK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 721 NRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 762
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQK--SHNLTDSVRLKCREMLQNSIQ 66
AP + + + K ++++ +KP PP + + +V RE+L +Q
Sbjct: 726 APTPVEKPQTPAEPKVREQKKRPPKEKPLPGPAPPLQLSGEQVRSAVADSLREVLLKRLQ 785
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
G ++ +A +E AI++ + TD RYK + RS + NL+DP+N L I G
Sbjct: 786 EPANLTVGEEAVRGIAANIEAAIFDLMQCTDYRYKTKYRSLVFNLRDPRNKDLFLQVIRG 845
Query: 127 AISASKLATMTA 138
I+ L M+A
Sbjct: 846 DITPQGLVRMSA 857
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 16/112 (14%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
+ S + LA E+E ++ F + +YK + RS + NLKD NP L + G IS +L
Sbjct: 402 VQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLC 461
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
+MTAE E+A+ E+ R I ++ + AQ+ + ++ D+
Sbjct: 462 SMTAE-------------ELASKELSEWR---IAKAEELAQMVVLPDSEVDI 497
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TDNR
Sbjct: 662 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKEMFNLFQVTDNR 717
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
YK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 718 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 757
>gi|432850533|ref|XP_004066800.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oryzias latipes]
Length = 501
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAI 128
ELA +EE I+ K RYK VRS++ANL++PKNP L R + G++
Sbjct: 387 ELAGAIEEHIHQLHKPNQLRYKTCVRSKVANLRNPKNPHLRRGLLSGSL 435
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 35 KPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA---IYN 91
+PS + P + +VR K +E+L+ S +G + E+A +E A IY+
Sbjct: 123 RPSSAPFIPAGLDKVRATVRTKLKEILEAS--------EG-GNPGEVAAAIEVAMARIYH 173
Query: 92 EFKNTDNR--YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
+ + Y + R NLK KN L +N + ++S +L M+AE
Sbjct: 174 MGAPGEQKKDYMAKYRQLSFNLK--KNGDLRQNLLDDSVSGDQLIKMSAE---------- 221
Query: 150 TTFEMANDEMKTLRNKFIKESIDDAQL-------------ATVQGTKTDLLKCGKCKKRN 196
E+A +E + K ++ +A+L +GTK L CG+CK
Sbjct: 222 ---ELATEEKRAQIEKLRDDAFQEARLDWAEANHEKIQKQTGTEGTK-GLFTCGRCKSSK 277
Query: 197 CTYNQVQTRSADEPMTTL 214
+ Q QTRSADEPMT
Sbjct: 278 TSNTQKQTRSADEPMTVF 295
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++LA +EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 20 DDLAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTA 79
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E E+A+ E+ R + ++ + AQ+ + T+ D+ + +K +
Sbjct: 80 E-------------ELASKELSEWR---LAKAEELAQMVVLPSTEVDVRRL--VRKTHKG 121
Query: 199 YNQVQTRSAD 208
QV+ D
Sbjct: 122 EFQVEVEETD 131
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F TDNR
Sbjct: 913 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALHIEKELFNLFHVTDNR 968
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
YK++ RS + NLKDPKN L + I SKL M E
Sbjct: 969 YKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPE 1008
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++LA +EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 20 DDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTA 79
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E E+A+ E+ R + ++ + AQ+ + T+ D+ + +K +
Sbjct: 80 E-------------ELASKELSEWR---LAKAEELAQMVVLPSTEVDVRRL--VRKTHKG 121
Query: 199 YNQVQTRSAD 208
QV+ D
Sbjct: 122 EFQVEVEETD 131
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNR 99
Q + + ++R +E+L + D D L E ++A +E+ ++N F+ TDNR
Sbjct: 615 QPNSQIRQNIRRSLKEILWKRVN----DSDDLIMTENEVGKIALLIEKEMFNLFRVTDNR 670
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
YK++ RS + NLKDPKN L + IS +KL M E
Sbjct: 671 YKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 710
>gi|157875290|ref|XP_001686044.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
gi|68129117|emb|CAJ06790.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
Length = 473
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 146 DEPMTTF----EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
D+P F E A E + E+ D+A L T L KCG+C KR+CT+ +
Sbjct: 393 DQPSEVFTTKSEKARQEQRIQEKMKAIEAADNAML-----NITSLFKCGRCGKRHCTFYE 447
Query: 202 VQTRSADEPMTTLHHFYIT 220
QTRSADEP T YIT
Sbjct: 448 QQTRSADEPTTK----YIT 462
>gi|154344264|ref|XP_001568076.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065410|emb|CAM40841.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 474
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 146 DEPMTTF----EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
D+P F E A E + E+ D+A+L T L KCG+C KR+CT+ +
Sbjct: 394 DQPNEVFTTKSEKARQEQRIQEKIKAIEAADNARL-----NITALFKCGRCGKRHCTFYE 448
Query: 202 VQTRSADEPMTTLHHFYIT 220
QTRSADEP T YIT
Sbjct: 449 QQTRSADEPTTK----YIT 463
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA ++EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 370 ESLALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMTA 429
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E E+A+ E+ R + ++ + AQ+ + T+ D+ + KK +
Sbjct: 430 E-------------ELASKELSEWR---MAKAEEFAQMVVLPDTEVDIRRL--VKKTHKG 471
Query: 199 YNQVQTRSAD 208
QV+ D
Sbjct: 472 EFQVEVEEYD 481
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE-V 140
A E+E A+ + Y +VR+ + NLK KN L I G ++ +L MT+E +
Sbjct: 250 AGEVEAAVDTWSRGVKQTYNEKVRTLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEEL 307
Query: 141 QTRSADEPMTTFEMANDEMKTLR--NKFIKESIDDAQLATVQGTKTDL-----LKCGKCK 193
QT DE E D +K+L+ + + ++ ++ + G K DL CG+CK
Sbjct: 308 QT---DEKAKAIE---DTVKSLQESRRLDWDQANEDKINDMCGIKGDLKNASLFTCGRCK 361
Query: 194 KRNCTYNQVQTRSADEPMTTL 214
T Q QTRSADEPMT
Sbjct: 362 STKTTSTQKQTRSADEPMTVF 382
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++LA +EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 345 DDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTA 404
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCT 198
E E+A+ E+ R + ++ + AQ+ + T+ D+ + +K +
Sbjct: 405 E-------------ELASKELSEWR---LAKAEELAQMVVLPSTEVDVRRL--VRKTHKG 446
Query: 199 YNQVQTRSAD 208
QV+ D
Sbjct: 447 EFQVEVEETD 456
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA +EE ++ F+ + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 337 ESLAFRIEEELFKLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTA 396
Query: 139 E 139
E
Sbjct: 397 E 397
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 43 PQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDN 98
P + + ++R +E+L + +D D L +E +A+ +E ++N +++TD+
Sbjct: 628 PGPNMQIRQNIRRSLKEILWKRV----IDSDDLVMVENEVARIASNIEREMFNLYRDTDS 683
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RYK++ R+ + NLKDPKN L + IS +KL + E
Sbjct: 684 RYKSKYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPE 724
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 18/134 (13%)
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
+ S + +A+ +E +YN F + +YK + RS + NLKD NP L + G I KL
Sbjct: 388 VPSPQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLC 447
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
+MTAE E+A+ E+ R + ++ + AQ+ + + D+ + KK
Sbjct: 448 SMTAE-------------ELASKELSEWR---MAKAEELAQMVVLPDSDVDMRRL--VKK 489
Query: 195 RNCTYNQVQTRSAD 208
+ QV+ D
Sbjct: 490 THKGEFQVEVEPVD 503
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA+ +E ++ F+ + +YK + RS + NLKD NP L +FG I +L +MTA
Sbjct: 415 ELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTA 474
Query: 139 E 139
E
Sbjct: 475 E 475
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
++LA +EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 345 DDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTA 404
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E E+A+ E+ R + ++ + AQ+ + T+ D+
Sbjct: 405 E-------------ELASKELSEWR---LAKAEELAQMVVLPSTEVDV 436
>gi|401428110|ref|XP_003878538.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494786|emb|CBZ30089.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 476
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 146 DEPMTTF----EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
D+P F E A E + E+ D+A L T L KCG+C KR+CT+ +
Sbjct: 396 DQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAML-----NITSLFKCGRCGKRHCTFYE 450
Query: 202 VQTRSADEPMTTLHHFYIT 220
QTRSADEP T YIT
Sbjct: 451 QQTRSADEPTTK----YIT 465
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++ F+ TDNRYK++
Sbjct: 663 QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTESEVGKIALHIEKEMFQLFQVTDNRYKSK 722
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + IS +KL M E
Sbjct: 723 YRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 758
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++ F+ TDNRYK++
Sbjct: 663 QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTESEVGKIALHIEKEMFQLFQVTDNRYKSK 722
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + IS +KL M E
Sbjct: 723 YRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPE 758
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA+++E +Y F + +Y+ R RS + NLKD NP L + ISA +L +MTAE
Sbjct: 262 LASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSMTAE- 320
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E+A+ E+ R +E A++ +Q T D+
Sbjct: 321 ------------ELASKELSQWRQAKAEEM---AKMVVLQDTDIDV 351
>gi|398021913|ref|XP_003864119.1| transcription elongation factor-like protein [Leishmania donovani]
gi|322502353|emb|CBZ37437.1| transcription elongation factor-like protein [Leishmania donovani]
Length = 473
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 146 DEPMTTF----EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
D+P F E A E + E+ D+A L T L KCG+C KR+CT+ +
Sbjct: 393 DQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAML-----NITSLFKCGRCSKRHCTFYE 447
Query: 202 VQTRSADEPMTTLHHFYIT 220
QTRSADEP T YIT
Sbjct: 448 QQTRSADEPTTK----YIT 462
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA+++E +Y F + +Y+ R RS + NLKD NP L + ISA +L +MTAE
Sbjct: 264 LASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSMTAE- 322
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E+A+ E+ R +E A++ +Q T D+
Sbjct: 323 ------------ELASKELSQWRQAKAEEM---AKMVVLQDTDIDV 353
>gi|146098158|ref|XP_001468341.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
gi|134072708|emb|CAM71425.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
Length = 473
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 146 DEPMTTF----EMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQ 201
D+P F E A E + E+ D+A L T L KCG+C KR+CT+ +
Sbjct: 393 DQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAML-----NITSLFKCGRCGKRHCTFYE 447
Query: 202 VQTRSADEPMTTLHHFYIT 220
QTRSADEP T YIT
Sbjct: 448 QQTRSADEPTTK----YIT 462
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 29 EKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEA 88
++KE K S + P + +VR K +E ++++ D D ++ ++AT +E A
Sbjct: 116 KRKETKSSSSASFLPPGLDKMRATVRTKMKE----NLELADADT---SNAPDVATAIEIA 168
Query: 89 IYNEFK-----NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTR 143
+ F Y + R NLK KN L + + +SA +L M+ E
Sbjct: 169 MARMFSVGFPGENKKDYTAKFRQLSFNLK--KNARLREDLLLDVVSAEQLINMSPE---- 222
Query: 144 SADEPMTTFEMANDEMKTLRNKFIKESIDDAQL-------------ATVQGTKTDLLKCG 190
E+A DE + K ++ A+L ++ L CG
Sbjct: 223 ---------ELATDEKRHEIEKLRDDAFQRARLDWADANEDKINKQCGIEKNSKGLFTCG 273
Query: 191 KCKKRNCTYNQVQTRSADEPMTTL 214
+CK + Q QTRSADEPMT
Sbjct: 274 RCKSSKTSNTQKQTRSADEPMTVF 297
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA+E+E ++ F + +YK + RS + NLKD NP L + G I+ +L +MTAE
Sbjct: 394 LASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSMTAE 452
>gi|163954997|ref|YP_001648101.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
gi|163638446|gb|ABY27805.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
Length = 167
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
N YK++ NL++ +P L+R I + + + M E D P T + +
Sbjct: 53 NMYKHKFLQLQYNLRN--SPALNRWIIEKKVKSKDVVDMRPE--ELWPDGPCAT-AIEDK 107
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+K LR ++ + I D + CG+CK +Y Q+QTRSADEPMTT
Sbjct: 108 IVKDLRKAYLAQEIKDTE---------GFFTCGRCKSNKTSYYQLQTRSADEPMTTF 155
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 44 QKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNR 103
Q + + ++R +E+L + D + + + ++A +E+ ++N F TDNRYK++
Sbjct: 827 QPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVGKIALNIEKEMFNLFHATDNRYKSK 886
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
RS + NLKDPKN L + + S+L M E
Sbjct: 887 YRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPE 922
>gi|313768224|ref|YP_004061904.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
gi|312598920|gb|ADQ90944.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
Length = 171
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EEA ++ K T + YK + S +LKD NP L ++ I + + + M E
Sbjct: 46 EEAAWDNHKYT-SIYKQKFLSIQKSLKD--NPKLKKSIIEKRLKSHDVINMRPE------ 96
Query: 146 DEPMTTFEMANDEM--KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
E+ D + K + K KE I L+ + KCG+CK TY Q+Q
Sbjct: 97 -------ELCPDGLYAKQIETKIHKE-IRKEYLSREIKNQDGFFKCGRCKSMKTTYYQLQ 148
Query: 204 TRSADEPMTTL 214
TRSADEPMTT
Sbjct: 149 TRSADEPMTTF 159
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA+ +E ++ F + +YK + RS + NLKD NP L +FG I +L +MTAE
Sbjct: 366 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMTAE 424
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE-MANDE 158
Y + R NLK KN L +N + +S +L MTAE + +E E + +D
Sbjct: 182 YMAKYRQLSFNLK--KNGELRQNLLDDNVSGDQLVKMTAE--ELATEEKRAQIEKLRDDA 237
Query: 159 MKTLRNKFIKESIDDAQLAT-VQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ R + + + D Q T +GTK L CG+CK + Q QTRSADEPMT
Sbjct: 238 FQEARLDWAEANHDKIQKQTGTEGTK-GLFTCGRCKSSKTSNTQKQTRSADEPMTVF 293
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA+++E +Y F + +Y+ R RS + NLKD NP L + ISA +L +MTAE
Sbjct: 204 LASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSMTAE- 262
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDL 186
E+A+ E+ R +E A++ +Q T D+
Sbjct: 263 ------------ELASKELSQWRQAKAEEM---AKMVVLQDTDIDV 293
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 69 DLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAI 128
DL+M + + +L +E +++ F+NTD++Y N+ R+ + NLKDPKN L + G I
Sbjct: 568 DLEMSE-SEVAKLVACIETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEI 626
Query: 129 SASKLATMTA-EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
+L M+ ++Q +A EP E + D+ K N S A G D+L
Sbjct: 627 GPFRLVRMSQKDMQAITAPEPKAA-EKSQDQKK---NPAPPSSKVRASHPGQDGAAPDIL 682
Query: 188 KC 189
C
Sbjct: 683 SC 684
>gi|260665894|ref|YP_003212848.1| hypothetical protein H665_p024 [Ostreococcus tauri virus 1]
gi|260160912|emb|CAY39612.1| hypothetical protein OTV1_024 [Ostreococcus tauri virus 1]
Length = 167
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 98 NRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMAND 157
N YK++ NL++ +P L+R + + + + M E D P T + +
Sbjct: 53 NMYKHKFLQLQYNLRN--SPALNRWIVEKKVKSKDVVDMRPE--ELWPDGPCAT-AIEDK 107
Query: 158 EMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+K LR ++ + I D + CG+CK +Y Q+QTRSADEPMTT
Sbjct: 108 IVKDLRKAYLAQEIKDTE---------GFFTCGRCKSNKTSYYQLQTRSADEPMTTF 155
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA +EE ++ F + +YK + RS + NLKD NP L + G I+ +L +MTA
Sbjct: 339 ESLAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTA 398
Query: 139 E 139
E
Sbjct: 399 E 399
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA +E+ ++N NTD++YKN+ RS + NLKDPKN L I G ++ +L ++AE
Sbjct: 674 LAFAIEKEMFNLCLNTDSKYKNKYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAE 732
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 49/83 (59%)
Query: 37 SVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNT 96
+++ P Q + + ++R +E+L + D + + ++A +E+ ++N F+ T
Sbjct: 637 AMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVT 696
Query: 97 DNRYKNRVRSRIANLKDPKNPML 119
DNRYK++ RS + NLKDPKN ++
Sbjct: 697 DNRYKSKYRSIMFNLKDPKNQVM 719
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA+++E ++ F+ + +YK + RS + NLKD NP L + + G IS +L MTA
Sbjct: 355 ELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTA 414
Query: 139 E 139
E
Sbjct: 415 E 415
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA +E+ ++N +TD++YKN+ RS + NLKDPKN L + G +S +L ++AE
Sbjct: 693 LAVAIEKEMFNLCLSTDSKYKNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAE 751
>gi|310831288|ref|YP_003969931.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
gi|309386472|gb|ADO67332.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
Length = 157
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 31/155 (20%)
Query: 72 MDGLASLEELATELEEAIY---NEFKNT--------DNRYKNRVRSRIANLKDPKNPMLS 120
M L +LAT+LE +I+ N++ T +N Y+++ I +L NP L
Sbjct: 10 MLDLVKDSKLATKLENSIFKWTNDYMETNITPPFMFENFYQDKFSDIIKHLNIKNNPYLL 69
Query: 121 RNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF-IKESIDDAQLATV 179
G I +A + E E+ ++ + + NK ++++I D Q T
Sbjct: 70 EAIKTGKIKPENIAFLKPE-------------EIYPEKFEAILNKRKLEKAIKDNQATT- 115
Query: 180 QGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D KC +CKKR +Q Q R+ DEPMTT
Sbjct: 116 -----DAFKCPRCKKRKAKIDQKQIRAGDEPMTTF 145
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA+ +E ++ F + +YK + RS + NLKD NP L +FG I +L +MTA
Sbjct: 394 ELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMTA 453
Query: 139 E 139
E
Sbjct: 454 E 454
>gi|378706130|gb|AFC34931.1| hypothetical protein OtV6_023c [Ostreococcus tauri virus RT-2011]
Length = 171
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K + + IKE + A LA + CG+CK + TY Q+QTRSADEPMTT
Sbjct: 106 KMMEERIIKE-MRKAYLAQEVKNQEGFFTCGRCKSKKTTYYQLQTRSADEPMTTF 159
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 13 ISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCR----EMLQNSI-QV 67
+S + ++KK+E+K+ + K+ + PP+K T+ +RL R E+L + I +
Sbjct: 1231 VSPKQTPNTKKQESKQAIIQSKQQQIKPSPPRKPE--TEPIRLNIRKTLTELLSSRIKET 1288
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
DL + + +LA +E +Y FK+T +YK + RS + N+KD KN L R +
Sbjct: 1289 EDLKLTD-EEIADLAYNIELELYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIADRS 1347
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
++ + ++ + EMA+ E+ R K K QL ++ + DL+
Sbjct: 1348 LTPDAVVRLSPD-------------EMASQELAEWREKETKH-----QLEMIKKNELDLM 1389
Query: 188 KCGKC 192
K
Sbjct: 1390 AQAKS 1394
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYK 101
P Q + + ++R +E+L D M + + ++A +E+ ++N F TDNRYK
Sbjct: 302 PSQPNSQIRQNIRRSLKEILWKRASDSDDLMMTESEVGKVAFHIEKEMFNLFHVTDNRYK 361
Query: 102 NRVRSRIANLKDPKNPML 119
++ RS + NLKDPKN ++
Sbjct: 362 SKYRSIMFNLKDPKNQVM 379
>gi|357289731|gb|AET73044.1| transcription elongation factor A [Phaeocystis globosa virus 12T]
gi|357292531|gb|AET73867.1| transcription elongation factor A 1 [Phaeocystis globosa virus 14T]
Length = 173
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 36/161 (22%)
Query: 72 MDGLASL---EELATELEEAIYN------EFKNTDNRYKN---------RVRSRIANLKD 113
+D L S+ E++A +E+ IYN + KN ++ N +++ I N+ D
Sbjct: 19 VDKLNSMLDNEKIALNMEKGIYNYSIQTADKKNLIKKWNNEQFVTIYIQKLKMIINNITD 78
Query: 114 PKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDD 173
P+ L I A +A MT E E + + DE NKF +
Sbjct: 79 PE---LLDKITSKTIKAHLIAFMTHEELRPDLWEELIAIKKMKDE-----NKFSPK---- 126
Query: 174 AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
++ + TD C KCK+ CTY Q+QTRSADE MTT
Sbjct: 127 -----IEAS-TDEFTCFKCKENKCTYYQLQTRSADESMTTF 161
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA+E+E ++ F + +YK + RS + NLKD NP L + G I +L +MTAE
Sbjct: 284 LASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMSGEIPPGRLCSMTAE- 342
Query: 141 QTRSADEPMTTFEMANDE 158
A + ++ + MA E
Sbjct: 343 --ELASKELSEWRMAKAE 358
>gi|294887906|ref|XP_002772275.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
gi|239876350|gb|EER04091.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
Length = 78
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 154 MANDEMKTLRNKFIKESIDDAQ--LATVQGT--KTDLLKCGKCKKRNCTYNQVQTRSADE 209
MA++ R K ++++ Q A G K+ + +CGKC+K TY Q+QTRS+DE
Sbjct: 1 MASEAKNQHRANAAKAALEECQSDWAMRHGAIQKSGMFQCGKCRKSQTTYFQMQTRSSDE 60
Query: 210 PMTTL 214
PMTT
Sbjct: 61 PMTTF 65
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 51 DSVRLKCREMLQNSI-QVGDLDMDGLASLEE------LATELEEAIYNEFKNTDNRYKNR 103
D++R K R +L S+ +V GL +A ++E ++ + + +
Sbjct: 279 DALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPICVAADVESVMFQKMGAFNGAKTVK 338
Query: 104 VRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTL 162
RS + NLKDPKNP L R + G I KL TMT+E + + FE A MK+L
Sbjct: 339 YRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQ----FENAQIRMKSL 393
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 46 SHNLTD-SVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNRY 100
SH + + +R R L+ + +D D L +E +AT +E ++N +++TD+RY
Sbjct: 622 SHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVARIATNIEREMFNLYRDTDSRY 681
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
K + R+ + NLKDPKN L + I +KL + E
Sbjct: 682 KAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 720
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 46 SHNLTD-SVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNRY 100
SH + + +R R L+ + +D D L +E +AT +E ++N +++TD+RY
Sbjct: 694 SHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVARIATNIEREMFNLYRDTDSRY 753
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
K + R+ + NLKDPKN L + I +KL + E
Sbjct: 754 KAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 792
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 46 SHNLTD-SVRLKCREMLQNSIQVGDLDMDGLASLE----ELATELEEAIYNEFKNTDNRY 100
SH + + +R R L+ + +D D L +E +AT +E ++N +++TD+RY
Sbjct: 609 SHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVARIATNIEREMFNLYRDTDSRY 668
Query: 101 KNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
K + R+ + NLKDPKN L + I +KL + E
Sbjct: 669 KAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 707
>gi|448926167|gb|AGE49744.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Can18-4]
Length = 180
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
SID A +A +L+CGKCK R +Y ++QTRSADEPMT ++
Sbjct: 130 SIDPADMAD------GMLQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVC 174
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%)
Query: 52 SVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANL 111
SVR R++L + + +L + + S+ +L ++E + F T+N+YK + RS I NL
Sbjct: 20 SVRRVLRQVLVSRCKQDELLVIQVESIGKLCKKIESELLKLFVETNNKYKAKSRSLIFNL 79
Query: 112 KDPKNPMLSRNYIFGAISASKLATMTAE 139
+D +N +L + + G I+ +L MT E
Sbjct: 80 RDNQNKILYKRVVSGEITPYELVRMTPE 107
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA +E+ ++N +TD++YKN+ RS + NLKDPKN L + G +S +L ++AE
Sbjct: 769 LAFAIEKEMFNLCLSTDSKYKNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAE 827
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A++N + T++RYK + RS + NL+DP+NP L + G I+ L M+
Sbjct: 693 VEGIAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMS 752
Query: 138 A 138
+
Sbjct: 753 S 753
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA+++E ++ F + +YK + RS + NLKD NP L + + G IS +L MTA
Sbjct: 361 ELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTA 420
Query: 139 E 139
E
Sbjct: 421 E 421
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA+++E ++ F + +YK + RS + NLKD NP L + + G IS +L MTA
Sbjct: 361 ELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTA 420
Query: 139 E 139
E
Sbjct: 421 E 421
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 20 SSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKC----REMLQNSIQ-VGDLDMDG 74
S + E K +++ + S +P Q+ L VR RE+L + +Q + DL +
Sbjct: 560 SPVEGEEKPDEQNGAEDSAQLWPQQEKLPLDAGVRSTVVRAMREVLWSRLQELPDLVLSE 619
Query: 75 LASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
++E LA +E A+++ T+ Y+ + RS + NL+DP+NP L I G ++ L
Sbjct: 620 -GAVEGLAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLV 678
Query: 135 TMTA 138
M +
Sbjct: 679 RMNS 682
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A++N + T+ RYK + RS + NL+DP+NP L + G I+ L M+
Sbjct: 578 VEGIAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMS 637
Query: 138 A 138
+
Sbjct: 638 S 638
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 90 YNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPM 149
YN+F D +YK + RS + N+KDPKN + +F ++ +L MTA+
Sbjct: 1030 YNQFSKVDQKYKTKYRSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTAD---------- 1079
Query: 150 TTFEMANDEMKTLR---NKFIKESIDDAQLATVQGTKTDLLKCGK 191
EMA+ E+ R NK E I +L + K L+K K
Sbjct: 1080 ---EMASQELAEWRERENKHQIEMIRKTELDMMNQPKALLMKTHK 1121
>gi|281206908|gb|EFA81092.1| hypothetical protein PPL_05928 [Polysphondylium pallidum PN500]
Length = 79
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+DL C KC KR CTY Q+QTRSAD+P+TT
Sbjct: 16 SDLFTCPKCGKRKCTYFQLQTRSADDPLTTF 46
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A++N + T+ RYK + RS + NL+DP+NP L + G I+ L M+
Sbjct: 656 VEGIAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMS 715
Query: 138 A 138
+
Sbjct: 716 S 716
>gi|448934363|gb|AGE57916.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NW665.2]
Length = 181
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
SID A +A +L+CGKCK R +Y ++QTRSADEPMT
Sbjct: 131 SIDPADMAD------GMLQCGKCKSRKTSYYEMQTRSADEPMTVF 169
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 78 LEELATELEEAIYNEFKN-TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
++ L+ ++EE ++ F+N D +YK++ RS I N+KDPKN L + + IS L +
Sbjct: 1151 IDNLSIKIEEKLFKHFENKVDTKYKSKYRSLIFNIKDPKNETLYKKIVDNLISPKDLVKL 1210
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCG 190
+ E E+A+ E+ R K + QL ++ T+ +L+ G
Sbjct: 1211 SPE-------------ELASQELARWREKE-----NQHQLEMIKKTELELMTKG 1246
>gi|448928188|gb|AGE51759.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVM-1]
Length = 181
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
+L+CGKCK R +Y ++QTRSADEPMT ++
Sbjct: 141 MLQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVC 175
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 39 TQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGL---------ASLEELATELEEAI 89
T PP N+ +V+ +E L D D G + ++ E+EE +
Sbjct: 297 TTPPPAAGENIRVTVKKTLKEHLLQRTSELDEDKSGAQLLAVRLSESEIDAFVAEVEEEM 356
Query: 90 YNEF-KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
+ F K+T +Y+ + RS + N+KD KN L + I A +L MT E
Sbjct: 357 FGMFNKDTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPE--------- 407
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
E+A+ E+ R E+ + QL ++ ++ DLL C K
Sbjct: 408 ----ELASQELAQWR-----ENENKHQLEMIKKSELDLLACAK 441
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E LA +EE ++ F + +YK + RS + NLKD NP L + G I +L +MTA
Sbjct: 342 EILAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTA 401
Query: 139 E 139
E
Sbjct: 402 E 402
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 23 KKEAKEEKKEDKKPSVTQYPPQKSHNLTD-----SVRLKCREMLQNSIQ-VGDLDMDGLA 76
+ E +E + D Q PQ+ D +V +E+L + +Q + DL + A
Sbjct: 503 EAEDREPGERDGGEDPAQLQPQQEKKPLDIGVRGTVVRAMQEVLWSRLQELPDLVLSEEA 562
Query: 77 SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
+E +A +E A+++ + T+ RYK + RS + NL+DP+NP L + G ++ L M
Sbjct: 563 -VEGIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDVTPQGLVQM 621
Query: 137 TA 138
++
Sbjct: 622 SS 623
>gi|155121849|gb|ABT13717.1| hypothetical protein MT325_M163L [Paramecium bursaria chlorella
virus MT325]
Length = 180
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 170 SIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYIT 220
S+D A +A +L+CGKCK R +Y ++QTRSADEPMT ++
Sbjct: 130 SMDPADMAD------GMLQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVC 174
>gi|1085870|pir||S47663 transcription elongation factor TFIIS homolog - Chlorella virus
CV-K2
gi|565274|dbj|BAA04187.1| transcription elongation factor SII [Chlorella virus]
gi|448928857|gb|AGE52426.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CvsA1]
gi|448931619|gb|AGE55180.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus MA-1E]
Length = 180
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|448927837|gb|AGE51409.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CviKI]
Length = 180
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|448930913|gb|AGE54476.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus KS1B]
Length = 180
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|9631693|ref|NP_048472.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1131468|gb|AAC96492.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 180
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|397624121|gb|EJK67280.1| hypothetical protein THAOC_11713 [Thalassiosira oceanica]
Length = 2246
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 51 DSVRLKCREMLQNSIQVG---------DLDMDGLASLEELATELEEAIYNEFKN-----T 96
+SVR K R ++ SI G D + SL LA ++E+ +N + +
Sbjct: 1939 ESVRDKSRNFIEKSILTGIETMGFCQDDTEARDFCSL--LAWKIEDHCFNVYHSDPTASI 1996
Query: 97 DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
YKN+VRS NL+DPKNP L I G +S +L +AE SA
Sbjct: 1997 SPEYKNKVRSLRFNLQDPKNPSLCARVIVGDMSIDELIDASAEDLASSA 2045
>gi|367008648|ref|XP_003678825.1| hypothetical protein TDEL_0A02820 [Torulaspora delbrueckii]
gi|359746482|emb|CCE89614.1| hypothetical protein TDEL_0A02820 [Torulaspora delbrueckii]
Length = 568
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 81 LATELEEAIYNEFKNTDNR-YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
L +EL EA ++ N + Y +VRS +NLKD KN L + + G++ SKLATM+A+
Sbjct: 242 LESELYEACLDKENNRLGKFYPEKVRSIFSNLKDKKNLTLKTHVVNGSLPLSKLATMSAQ 301
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
E+AN +++ + K +S+D QL Q K +K K
Sbjct: 302 -------------ELANPDLQAFKEKVDSQSLD--QLIIEQPNKPRWVKTHK 338
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSI-----QVGDLDMDGLASLEEL--ATELEEAIYNEFK 94
P ++ +D +R K R +L S+ +V + M+ + + + A ++E ++
Sbjct: 192 PSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMG 251
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ + + RS + N+KDPKNP L R + G I KL TMTAE
Sbjct: 252 LFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAE 296
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSI-QVGDLDMDGL 75
K +S+KK+EAK + K+ +T ++ + ++R E+L + I + DL +
Sbjct: 105 KQTSTKKQEAKPSPSQLKQTKLTPVKKPETEPIRVNIRKTLTELLSSRIKETEDLKLTD- 163
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
+ +LA +E +Y FK+T ++YK + RS + N+KD KN L R +++ +
Sbjct: 164 EEIADLAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVR 223
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
++ + EMA+ E+ R K K QL ++ + DL+ K
Sbjct: 224 LSPD-------------EMASQELAEWREKETKH-----QLEMIKKNELDLMAQAKS 262
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSI-----QVGDLDMDGLASLEEL--ATELEEAIYNEFK 94
P ++ +D +R K R +L S+ +V + M+ + + + A ++E ++
Sbjct: 192 PSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMG 251
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ + + RS + N+KDPKNP L R + G I KL TMTAE
Sbjct: 252 LFNGTKQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAE 296
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 45.4 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 53 VRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLK 112
VR+ + + S ++ DL + A ++ +A ++E A+++ + T RYK + R+ + NL+
Sbjct: 538 VRVLWKALWSRSQKLSDLGLSEEA-VKGIAADIEAALFDLMQGTTYRYKTKYRTLLFNLR 596
Query: 113 DPKNPMLSRNYIFGAISASKLATMTA 138
DP+NP L + G ++ L M++
Sbjct: 597 DPRNPDLFLKVVHGNVTPHDLVRMSS 622
>gi|448929538|gb|AGE53105.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Fr5L]
Length = 180
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
+L CGKCK R +Y ++QTRSADEPMT ++
Sbjct: 140 MLSCGKCKSRKTSYYEMQTRSADEPMTVFAKCHV 173
>gi|261334448|emb|CBH17442.1| transcription elongation factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 213
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D ++ T + L C CK +NCT+ Q QTRSADEPMT
Sbjct: 158 DLTEIRKATSTTSTLFPCPSCKAKNCTWTQKQTRSADEPMTIF 200
>gi|71755313|ref|XP_828571.1| transcription elongation factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70833957|gb|EAN79459.1| transcription elongation factor, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 213
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
D ++ T + L C CK +NCT+ Q QTRSADEPMT
Sbjct: 158 DLTEIRKATSTTSTLFPCPSCKAKNCTWTQKQTRSADEPMTIF 200
>gi|448926845|gb|AGE50420.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVA-1]
gi|448928528|gb|AGE52098.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVR-1]
Length = 180
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLSCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|254578054|ref|XP_002495013.1| ZYRO0B01386p [Zygosaccharomyces rouxii]
gi|238937903|emb|CAR26080.1| ZYRO0B01386p [Zygosaccharomyces rouxii]
Length = 512
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
E + ELE +YN + + N Y R+R+ +NLKD KN L + I G I+ S+L M+A
Sbjct: 216 EKSQELERELYNVYPDHRN-YTERIRTIFSNLKDAKNLSLKAHVIKGQITTSQLVRMSAT 274
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
E+AN +++ R K ++++ QL Q + +K K
Sbjct: 275 -------------ELANPDLQEFREKIDEQAL--TQLVVEQPGRPRWVKTHK 311
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA 76
K S+S++K + K++ T+ PP + T+ +RL R+ L + + + LA
Sbjct: 1267 KPSTSQQKPVQSPKEQ----IATKTPPPRKPE-TEPIRLTVRKTLAELLTSRVKEANDLA 1321
Query: 77 SLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
EE LA ++E ++ FK+T +YK++ RS + N+KD KN L R ++S +
Sbjct: 1322 ITEEEISELALQIELEMFKFFKDTGQKYKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAA 1381
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
+ ++ + EMA+ E+ R K K QL ++ + DL+ K
Sbjct: 1382 VVKLSPD-------------EMASQELAEWREKENKH-----QLEMIKKNELDLMAQAKS 1423
>gi|290973573|ref|XP_002669522.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
gi|284083071|gb|EFC36778.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
Length = 176
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTL 214
KC KC+ CTY Q+QTRS+DEPMTT
Sbjct: 137 FKCTKCQSTQCTYYQLQTRSSDEPMTTF 164
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 17 KDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLA 76
K S+S++K + K++ T+ PP + T+ +RL R+ L + + + LA
Sbjct: 1274 KPSTSQQKPVQSPKEQ----IATKTPPPRKPE-TEPIRLTVRKTLAELLTSRVKEANDLA 1328
Query: 77 SLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
EE LA ++E ++ FK+T +YK++ RS + N+KD KN L R ++S +
Sbjct: 1329 ITEEEISELALQIELEMFKFFKDTGQKYKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAA 1388
Query: 133 LATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
+ ++ + EMA+ E+ R K K QL ++ + DL+ K
Sbjct: 1389 VVKLSPD-------------EMASQELAEWREKENKH-----QLEMIKKNELDLMAQAKS 1430
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E++ +E ++ +++T ++YK + R+ + NLKD N L R + G IS SKL MT
Sbjct: 818 IEKVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMT 877
Query: 138 AE 139
+E
Sbjct: 878 SE 879
>gi|157953358|ref|YP_001498249.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
gi|156068006|gb|ABU43713.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
Length = 180
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRS+DEPMT
Sbjct: 140 MLQCGKCKSRKTSYYELQTRSSDEPMTVF 168
>gi|313844000|ref|YP_004061663.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|312599385|gb|ADQ91407.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|357541718|gb|AET84480.1| hypothetical protein OLOG_00014 [Ostreococcus lucimarinus virus
OlV4]
Length = 178
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 35/139 (25%)
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EEA ++ K T N YK++ NLK N + +++I +T +V+TR
Sbjct: 53 EEAAWDNHKYT-NIYKHKFLQIQHNLK---NSSVLKDWI-----------ITKKVKTREV 97
Query: 146 ----------DEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKR 195
D P T +M K +R ++ + + + + C +CK +
Sbjct: 98 IDMRPEDLWPDGPYAT-KMQERMYKEIRKAYLAQEVKNQE---------GFFTCARCKSK 147
Query: 196 NCTYNQVQTRSADEPMTTL 214
TY Q+QTRSADEPMTT
Sbjct: 148 KTTYYQLQTRSADEPMTTF 166
>gi|155370263|ref|YP_001425797.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
gi|155123583|gb|ABT15450.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
Length = 180
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L CGKCK R +Y ++QTRSADEPMT
Sbjct: 140 MLTCGKCKSRKTSYYEMQTRSADEPMTVF 168
>gi|183234876|ref|XP_648942.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800868|gb|EAL43551.2| hypothetical protein EHI_055430 [Entamoeba histolytica HM-1:IMSS]
gi|407039077|gb|EKE39445.1| transcription factor S-II (TFIIS) domain containing protein
[Entamoeba nuttalli P19]
gi|449704587|gb|EMD44802.1| transcription elongation factor SII, putative [Entamoeba
histolytica KU27]
Length = 171
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 35 KPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFK 94
KP+V+ + N T ++++ L I+ D+ +DG+ E + ++K
Sbjct: 8 KPAVSGSNSYNTANKTKALKV-----LSKYIKESDI-LDGIG----------EGLAVKYK 51
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+ ++ +R +A L+ KN L N ++ ++L M+ + +M
Sbjct: 52 EDNEKFNFHLRQILAGLR--KNKKLVDNLCSKKVTPNELIEMSPD-------------DM 96
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGT-KTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
A++ +K ++ + IK+ D + + + KCGKC R QTRSADEPMT
Sbjct: 97 ADEAVKEIKERIIKDEEDKKKPIDISKIPDNNEFKCGKCGSRKIQETLAQTRSADEPMT 155
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 42 PPQKSHNL--TDSVRLKCREMLQNSIQ--VGDLDMDGLASLE-----ELATELEEAIYNE 92
PP+ + + D++R K RE+L ++ V + + + LA + +A +E ++ +
Sbjct: 28 PPKLTSMIKCNDALRDKFREILYEALSKVVSEAEGEDLARVNACDPVRIAVSVETVMFEK 87
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++ K + RS + NLKD NP L R + G I KL MTAE
Sbjct: 88 LGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAE 134
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 44.3 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 56 KCREMLQNSIQVGDLDMDGLASLEEL-------------ATELEEAIYNEFKNTDNRYKN 102
KC E L S+ L GL SL EL A +E A+++ + T+ RYK
Sbjct: 560 KCLESLPGSVP---LPYPGLHSLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKT 616
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+ RS + NL+DP+N L + GA++ L M++
Sbjct: 617 KYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSS 652
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 44.3 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYK 101
P Q + + ++R +E+L + D + + +A +E+ +++ F TDNRYK
Sbjct: 673 PSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVGRVALHIEKEMFSLFHVTDNRYK 732
Query: 102 NRVRSRIANLKDPKN 116
++ RS + NLKDPKN
Sbjct: 733 SKYRSIMFNLKDPKN 747
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 80 ELATELEEAIYNEFK-----NTDNRYKNRVRSRIANLKDPKNPMLSRNYIF-GAISASKL 133
+LA +E++IYN+F N Y ++R+ + NL DPKNP L RN IF G + +L
Sbjct: 2 DLACRIEQSIYNQFPFSTKFNLKESYNAKLRNILFNLSDPKNPDL-RNRIFSGELEPERL 60
Query: 134 ATMTAEVQTRSADEPMTTFEMANDEMKTLR 163
MT + EMA+ EM+ +
Sbjct: 61 PIMTND-------------EMASSEMRKWK 77
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA E+E ++ + +YK + RS + NLKD NP+L + G I+ +L +MT E
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTE 138
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+NP L + G I+ L M+
Sbjct: 579 VESIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMS 638
Query: 138 A 138
+
Sbjct: 639 S 639
>gi|388549029|gb|AFK66230.1| transcription elongation factor TFIIS [Ostreococcus lucimarinus
virus OlV3]
Length = 171
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 167 IKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + + A L CG+CK + +Y Q+QTRSADEPMTT
Sbjct: 112 IHKDLRKAYLTKEMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTF 159
>gi|314055114|ref|YP_004063452.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
gi|313575005|emb|CBI70018.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
Length = 171
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 167 IKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I + + A L CG+CK + +Y Q+QTRSADEPMTT
Sbjct: 112 IHKDLRKAYLTREMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTF 159
>gi|388548782|gb|AFK65984.1| hypothetical protein OLVG_00230 [Ostreococcus lucimarinus virus
OlV6]
Length = 171
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSA 145
EE ++ K T N YK++ NLK+ +P+L +N+I S L + +
Sbjct: 46 EEPAWDNHKYT-NIYKHKFLQLQYNLKN--SPVL-KNWILNRKVKS-LDVIEMRPEDLWP 100
Query: 146 DEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTR 205
D P ++ K LR ++ + +++ + CG+CK + +Y Q+QTR
Sbjct: 101 DGPYAK-KIEEKIHKDLRKDYLTKEMNNTE---------GFFTCGRCKSKKTSYYQLQTR 150
Query: 206 SADEPMTTL 214
SADEPMTT
Sbjct: 151 SADEPMTTF 159
>gi|344254957|gb|EGW11061.1| Death-inducer obliterator 1 [Cricetulus griseus]
Length = 803
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKN 116
+ ++A +E+ ++N F+ TDNRYK++ RS + NLKDPKN
Sbjct: 738 VGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 776
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
LA E+E ++ + +YK + RS + NLKD NP+L + G I+ +L +MT E
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTE 381
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 56 KCREMLQNSIQVGDLDMDGLASLEEL-------------ATELEEAIYNEFKNTDNRYKN 102
KC E L S+ GL SL EL A +E A+++ + T+ RYK
Sbjct: 3 KCLESLLGSVPP---PCPGLHSLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKT 59
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+ RS + NL+DP+N L + G ++ L M++
Sbjct: 60 KYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSS 95
>gi|448934703|gb|AGE58255.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NY-2B]
gi|448935075|gb|AGE58626.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NYs1]
Length = 180
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++QTRS+DEPM+
Sbjct: 140 MLQCGKCKSRKTSYYELQTRSSDEPMSVF 168
>gi|448925154|gb|AGE48734.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus AP110A]
Length = 194
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL----HHFYI 219
+L+CGKCK R +Y ++QTRSADEP + H YI
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPKMSWVEKHHAIYI 177
>gi|9857927|gb|AAG00938.1|AF272555_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 328
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 38/147 (25%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT--- 137
L+ ++E ++ Y N+ RS IANL+ ++ I G + LA M
Sbjct: 195 LSIKIENSVVLRLGTHLKEYTNKCRSIIANLQ--RSDEFRSKIINGIFTPDDLAAMNPRD 252
Query: 138 ----------AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
A+ +TR D + + +AN ++K +G T
Sbjct: 253 FLEDSLKKKRAKKETRIIDSKRSDYILANSKIK-------------------EGMYT--- 290
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
C KCK + T+ + QTRSADEPMTT
Sbjct: 291 -CEKCKSKKTTFYEQQTRSADEPMTTF 316
>gi|9857929|gb|AAG00939.1|AF272556_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 324
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 38/147 (25%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT--- 137
L+ ++E ++ Y N+ RS IANL+ ++ I G + LA M
Sbjct: 191 LSIKIENSVVLRLGTHLKEYTNKCRSIIANLQ--RSDEFRSKIINGIFTPDDLAAMNPRD 248
Query: 138 ----------AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLL 187
A+ +TR D + + +AN ++K +G T
Sbjct: 249 FLEDSLKKKRAKKETRIIDSKRSDYILANSKIK-------------------EGMYT--- 286
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTL 214
C KCK + T+ + QTRSADEPMTT
Sbjct: 287 -CEKCKSKKTTFYEQQTRSADEPMTTF 312
>gi|71424226|ref|XP_812723.1| transcription elongation factor-like protein [Trypanosoma cruzi
strain CL Brener]
gi|70877539|gb|EAN90872.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
M DE + + K D +L + T L KC C K C+Y + QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTT 462
>gi|448927189|gb|AGE50763.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVB-1]
Length = 195
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL----HHFYI 219
LL CGKCK R +Y ++QTRSADEP + H YI
Sbjct: 141 LLMCGKCKSRKTSYYEMQTRSADEPKMSWVEKHHAIYI 178
>gi|407866945|gb|EKG08471.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
M DE + + K D +L + T L KC C K C+Y + QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTT 462
>gi|407393614|gb|EKF26679.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi marinkellei]
Length = 477
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
M DE + + K D +L + T L KC C K C+Y + QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEDQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTT 462
>gi|302415831|ref|XP_003005747.1| transcription elongation factor S-II [Verticillium albo-atrum
VaMs.102]
gi|261355163|gb|EEY17591.1| transcription elongation factor S-II [Verticillium albo-atrum
VaMs.102]
Length = 287
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 82 ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
A E E A Y +K + YK +++S +NLK N L RN + G I+A + TMT
Sbjct: 213 AVECEAAAYRHYKGVTDDYKKKIKSLFSNLKVKTNRELGRNIMDGKITADRFVTMT 268
>gi|448932703|gb|AGE56261.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NE-JV-1]
Length = 194
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 173 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL----HHFYI 219
DA A + +L CGKCK + +Y ++QTRSADEP + H YI
Sbjct: 127 DASSADPKDMADSVLTCGKCKSKKVSYYEMQTRSADEPKMSWVEKHHAIYI 177
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 19 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 78
Query: 138 A 138
+
Sbjct: 79 S 79
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 65 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 124
Query: 138 A 138
+
Sbjct: 125 S 125
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 60 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 119
Query: 138 A 138
+
Sbjct: 120 S 120
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 42.7 bits (99), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 42 PPQKSHNL--TDSVRLKCREMLQNSIQVGDLDMDG--LASLE-----ELATELEEAIYNE 92
PP+ + + D++R K RE+L ++ + +G LA + +A +E ++ +
Sbjct: 28 PPKLTSMIKCNDALRDKFREILYEALSKVASEAEGEDLARVNACDPVRIAVSVETVMFEK 87
Query: 93 FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
++ K + RS + NLKD NP L R + G I KL MTAE
Sbjct: 88 LGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAE 134
>gi|448927516|gb|AGE51089.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVG-1]
Length = 194
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL----HHFYI 219
+L CGKCK R +Y ++QTRSADEP + H YI
Sbjct: 140 MLSCGKCKSRKTSYYEMQTRSADEPKMSWVEKHHAIYI 177
>gi|448930217|gb|AGE53782.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus IL-3A]
Length = 192
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
+L+CGKCK R +Y ++QTRSADEP HH +
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPK---HHGW 169
>gi|448933656|gb|AGE57211.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NE-JV-4]
Length = 192
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
+L+CGKCK R +Y ++QTRSADEP HH +
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPK---HHGW 169
>gi|448924785|gb|AGE48366.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus AN69C]
Length = 192
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
+L+CGKCK R +Y ++QTRSADEP HH +
Sbjct: 140 MLQCGKCKSRKTSYYEMQTRSADEPK---HHGW 169
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 55 LKCREMLQNSIQV-GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKD 113
LK EM + G + +G S E+A +E A+Y + + D Y+ R RS +NL+D
Sbjct: 20 LKAMEMAAEETKASGHDEANGTPS--EVAAAVESALYKKCGSADKEYRTRARSLKSNLQD 77
Query: 114 PKNPMLSRNYIFGAISASKLATMT 137
+NP L + + AS+L M+
Sbjct: 78 VRNPQLRARVLANDLKASQLVDMS 101
>gi|448935448|gb|AGE58998.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus OR0704.2.2]
Length = 180
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
+L C KCK R +Y ++QTRSADEPMT ++
Sbjct: 140 MLTCSKCKSRKTSYYEMQTRSADEPMTVFAKCHV 173
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 42.4 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 77 SLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
++E +A +E A+++ + T RYK + RS + NL+DP+NP L + G ++ L M
Sbjct: 589 AVEGIAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQGDVTPHDLVRM 648
Query: 137 T 137
+
Sbjct: 649 S 649
>gi|13358507|ref|NP_078754.1| Transcription factor SII homolog [Lymphocystis disease virus 1]
Length = 89
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 163 RNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+N+ I+E D+ L ++ K +LKC KCKK VQTRSADEPM+ +
Sbjct: 27 KNRLIEEHEDNYFLNPIEVEK-GILKCRKCKKTKIFSTHVQTRSADEPMSLI 77
>gi|157115423|ref|XP_001652602.1| hypothetical protein AaeL_AAEL007181 [Aedes aegypti]
gi|108876924|gb|EAT41149.1| AAEL007181-PA, partial [Aedes aegypti]
Length = 1504
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 94 KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFE 153
K+T +Y+ + R+ + N+KDPKN L + I A +LA MT E E
Sbjct: 739 KDTGTKYRAKYRTLVFNIKDPKNLSLFQKICEKRIGAKQLARMTPE-------------E 785
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
+A+ E+ R E+ + QL ++ ++ DLL C K
Sbjct: 786 LASQELAQWR-----ENENKHQLEMIKKSELDLLACAK 818
>gi|449017739|dbj|BAM81141.1| RNA polymerase III subunit [Cyanidioschyzon merolae strain 10D]
Length = 288
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 181 GTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
G +T ++C +C R ++ Q+QTRSADEPMTT +
Sbjct: 243 GQETSQVRCERCSARKASFYQLQTRSADEPMTTFY 277
>gi|357542240|gb|AET85000.1| transcription elongation factor [Micromonas pusilla virus SP1]
Length = 169
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 167 IKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
I E + L + C +CK + TY Q+QTRSADEPMTT
Sbjct: 110 IHEEMRKEYLTKEMKNQEGFFTCNRCKSKKTTYYQLQTRSADEPMTTF 157
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 58 REMLQNSIQVGDLDMDGLASLEE----LATELEEAIYNEFKNTDNRYKNRVRSRIANLKD 113
+E+L++ +Q ++ LA EE +A +E A+++ + T RYK + RS + NL+D
Sbjct: 110 QEVLRSRLQ----ELPELALSEEVVGGIAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRD 165
Query: 114 PKNPMLSRNYIFGAISASKLATMTAEVQTR 143
P+NP L + G ++ L + Q R
Sbjct: 166 PRNPDLFLKVLHGDVTPHDLGLEVIKQQQR 195
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 42.0 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 34 KKPSVTQYPPQKSHNLTDSVR----LKCREMLQNSIQVGDLDMDGLASLEE----LATEL 85
++ S P Q+ +L VR RE+L + +Q ++ L EE +A ++
Sbjct: 551 REDSAQLQPQQEKLSLDIGVRGAVVHAMREVLWSRLQ----ELPDLVLSEEAVGGIAADI 606
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E A+++ + T+ RYK + RS + NL+DP+NP L + G ++ L M++
Sbjct: 607 EAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSS 659
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+ LA +EE ++ +YK + RS + NLKD NP+L + G I+ L +MT
Sbjct: 336 QSLALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTT 395
Query: 139 E 139
E
Sbjct: 396 E 396
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA +E+ ++N +TD++YKN+ R+ + +LKDPKN L + G ++ +L + AE
Sbjct: 689 LAFAIEKEMFNLCLSTDSKYKNKYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAE- 747
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKES 170
E+ + EM R + ES
Sbjct: 748 ------------ELVSREMSEWRRRDAPES 765
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G +S L M+
Sbjct: 706 VESVAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMS 765
Query: 138 A 138
+
Sbjct: 766 S 766
>gi|71409051|ref|XP_806892.1| transcription elongation factor S-II [Trypanosoma cruzi strain CL
Brener]
gi|70870766|gb|EAN85041.1| transcription elongation factor S-II, putative [Trypanosoma cruzi]
Length = 477
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 154 MANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
M DE + + K + +L + T L KC C K C+Y + QTRSADEP T
Sbjct: 404 MTEDERRMEEARITKMIEEQEKLKLANVSVTSLFKCPNCGKNRCSYYEQQTRSADEPTT 462
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKN 116
+E +A +EEA+++ ++T+ RYKN+ RS + NL+DP+N
Sbjct: 30 VEAIAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRN 68
>gi|7521741|pir||S47662 transcription elongation factor TFIIS homolog - Chlorella virus
CV-U1
Length = 180
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+CGKCK R +Y ++Q R++DEPMT
Sbjct: 140 MLQCGKCKSRKTSYYEMQCRASDEPMTVF 168
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T RYK + RS + NL+DP+NP L + G ++ L M
Sbjct: 547 VEGIAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMN 606
Query: 138 A 138
+
Sbjct: 607 S 607
>gi|119607147|gb|EAW86741.1| transcription elongation factor A (SII), 1, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 38 VTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIY 90
V+ +P ++ + +DSVRLKCREML +++ GD + A EEL +++EE I
Sbjct: 113 VSSFP--RAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDIL 163
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 56 KCREMLQNSIQVGDLDMDGLASLEEL-------------ATELEEAIYNEFKNTDNRYKN 102
KC E L S+ L GL SL EL A +E A+++ + T+ RYK
Sbjct: 910 KCLESLLGSVP---LPCPGLHSLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKT 966
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+ RS + NL+DP+N L + G ++ L M++
Sbjct: 967 KYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSS 1002
>gi|300234|gb|AAC60551.1| RNA polymerase II elongation factor homolog [Saccharomyces
cerevisiae]
Length = 505
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 181 DVISISQEFAHNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 240
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMAN---DEMKTLRNKFIKESI 171
+ +KL M A E+AN E K R+K I E+
Sbjct: 241 LPLNKLVNMNAS-------------ELANPDLQEFKEKRDKIILENF 274
>gi|157952479|ref|YP_001497371.1| hypothetical protein NY2A_B175L [Paramecium bursaria Chlorella
virus NY2A]
gi|155122706|gb|ABT14574.1| hypothetical protein NY2A_B175L [Paramecium bursaria Chlorella
virus NY2A]
Length = 192
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
+L+CGKCK R +Y ++QTRS+DEP HH +
Sbjct: 140 MLQCGKCKSRKTSYYELQTRSSDEPK---HHGW 169
>gi|351704572|gb|EHB07491.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 741
Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 27 KEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSI-QVGDLDMDGLASLEELATEL 85
K EK KPSV Q L +R +E+L + + GDL + + + A L
Sbjct: 219 KPEKLCLPKPSV-----QPESQLRQIIRHSLKEILWKRVCESGDL-IRTENEVGKTAIRL 272
Query: 86 EEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASK 132
EE ++N F+ TD+RY+++ RS + LKDP + L G A K
Sbjct: 273 EEEMFNLFRVTDHRYRSKYRSIMLRLKDPASQDLPDTIHIGGRIAPK 319
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 41.2 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + TD RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 634 VEGIAAGIEAALWDLTQGTDGRYKAKYRSLLFNLRDPRNLDLFLRVVHGDVNPYDLVRMS 693
Query: 138 A 138
+
Sbjct: 694 S 694
>gi|410079068|ref|XP_003957115.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
gi|372463700|emb|CCF57980.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
Length = 560
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 73 DGLASLEELATELEEAIYNEFKNTD-----NRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D AS E+A+ LE +Y + N + N Y +VRS +NLKDPKN L + +
Sbjct: 226 DSFAS--EMASNLENELYKAWFNPEESKLSNYYAEKVRSIFSNLKDPKNLNLQAHVVNKD 283
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESI 171
I KL M+A E+AN +++ + K ES+
Sbjct: 284 IPFEKLVRMSAT-------------ELANPDLQQFKEKVNTESL 314
>gi|398364821|ref|NP_012921.3| Bye1p [Saccharomyces cerevisiae S288c]
gi|549655|sp|P36106.1|BYE1_YEAST RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|485977|emb|CAA81837.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813255|tpg|DAA09152.1| TPA: Bye1p [Saccharomyces cerevisiae S288c]
gi|392298137|gb|EIW09235.1| Bye1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 594
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 270 DVISISQEFAHNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 329
Query: 128 ISASKLATMTAEVQTRSADEPMTTFEMAN---DEMKTLRNKFIKESI 171
+ +KL M A E+AN E K R+K I E+
Sbjct: 330 LPLNKLVNMNAS-------------ELANPDLQEFKEKRDKIILENF 363
>gi|207343439|gb|EDZ70897.1| YKL005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 540
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 216 DVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 275
Query: 128 ISASKLATMTA 138
+ +KL M A
Sbjct: 276 LPLNKLVNMNA 286
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 22 KKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSI-QVGDLDMDGLASLEE 80
KK+E+K + K+ +T ++ + ++R E+L + I + DL + + +
Sbjct: 1236 KKQESKSSPSQLKQTKLTPVKKPETEPIRVNIRKSLTELLSSRIKETKDLKLTD-EEIAD 1294
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
LA +E +Y FK+T ++YK + RS + N+KD KN L R +++ + ++ +
Sbjct: 1295 LAFNIEFEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADHSLTPDAVVRLSPD- 1353
Query: 141 QTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
EMA+ E+ R K K QL ++ + DL+ K
Sbjct: 1354 ------------EMASQELAEWREKETKH-----QLEMIKKNELDLMAQAKS 1388
>gi|190409818|gb|EDV13083.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae RM11-1a]
gi|256271938|gb|EEU06959.1| Bye1p [Saccharomyces cerevisiae JAY291]
gi|365764652|gb|EHN06174.1| Bye1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 594
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 270 DVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 329
Query: 128 ISASKLATMTA 138
+ +KL M A
Sbjct: 330 LPLNKLVNMNA 340
>gi|170652914|sp|A6ZZW1.1|BYE1_YEAS7 RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|151941541|gb|EDN59904.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae YJM789]
Length = 594
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 270 DVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 329
Query: 128 ISASKLATMTA 138
+ +KL M A
Sbjct: 330 LPLNKLVNMNA 340
>gi|349579558|dbj|GAA24720.1| K7_Bye1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 594
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 270 DVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 329
Query: 128 ISASKLATMTA 138
+ +KL M A
Sbjct: 330 LPLNKLVNMNA 340
>gi|259147828|emb|CAY81078.1| Bye1p [Saccharomyces cerevisiae EC1118]
Length = 594
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D ++ +E A LEE +Y EF D Y +VRS +NLKD KN L + + G
Sbjct: 270 DVISISQEFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGK 329
Query: 128 ISASKLATMTA 138
+ +KL M A
Sbjct: 330 LPLNKLVNMNA 340
>gi|215274653|sp|P0C8F8.1|TFS2_ASFWA RecName: Full=Transcription factor S-II-related protein
Length = 243
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIF 231
>gi|9628245|ref|NP_042831.1| transcription factor SII homolog [African swine fever virus]
gi|135659|sp|P27948.1|TFS2_ASFB7 RecName: Full=Transcription factor S-II-related protein
gi|215274652|sp|P0C8F7.1|TFS2_ASFP4 RecName: Full=Transcription factor S-II-related protein
gi|210620|gb|AAA42700.1| transcription factor [African swine fever virus]
gi|780507|gb|AAA65367.1| transcription factor SII homolog [African swine fever virus]
gi|162849520|emb|CAN10487.1| Transcription factor SII homolog [African swine fever virus OURT
88/3]
gi|291289581|emb|CBH29238.1| BA71V-I243L (k9L) [African swine fever virus E75]
gi|1097530|prf||2113434EY transcription factor SII-like protein
Length = 243
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIF 231
>gi|303398823|emb|CBW46804.1| I243L [African swine fever virus Georgia 2007/1]
Length = 243
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIF 231
>gi|162849346|emb|CAN10237.1| transcription factor SII homolog [African swine fever virus Benin
97/1]
Length = 243
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIF 231
>gi|215274651|sp|P0C8F6.1|TFS2_ASFM2 RecName: Full=Transcription factor S-II-related protein
gi|450740|emb|CAA50848.1| transcription factor SII [African swine fever virus]
Length = 243
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPSTIF 231
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 6 LFPAPPGISNNKDSS--SKKKEAKEEKKEDKKPS------VTQYPPQKS---HNLTDSVR 54
L P+ P S+N+ S S++K E KE K+ + V P + S + +++R
Sbjct: 127 LRPSSPSTSSNETGSRRSQEKVFNERNKETKEQANIKTTKVGTSPRKDSFMQERVAENIR 186
Query: 55 LKCREMLQNSIQVGDLDMDGL----ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIAN 110
K + +L N I + +L+ G+ ++ ++A ++E A++ ++ D Y ++RS N
Sbjct: 187 EKAKNVL-NQILLENLEDTGVDIDKTNISKIAIDIENALFEKYFKAD--YLEQLRSLTFN 243
Query: 111 LKDPKNPMLSRNYIFGAISASKLATMTAE 139
L+ +N L R + IS ++LA MTA+
Sbjct: 244 LRGKRNLDLKRAIVMSDISPTRLAEMTAD 272
>gi|448930523|gb|AGE54087.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus IL-5-2s1]
gi|448931217|gb|AGE54779.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus MA-1D]
Length = 191
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEP 210
+L+CGKCK R +Y ++QTRS+DEP
Sbjct: 140 MLQCGKCKSRKTSYYELQTRSSDEP 164
>gi|215274650|sp|P0C8F5.1|TFS2_ASFK5 RecName: Full=Transcription factor S-II-related protein
Length = 243
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
+ L KC CK+R CTY +VQTR+ DEP T
Sbjct: 201 SQLYKCPNCKQRMCTYREVQTRALDEPST 229
>gi|167386526|ref|XP_001737794.1| transcription elongation factor S-II [Entamoeba dispar SAW760]
gi|165899246|gb|EDR25885.1| transcription elongation factor S-II, putative [Entamoeba dispar
SAW760]
Length = 171
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 31 KEDK-KPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGD-LDMDGLASLEELATELEEA 88
KED KP+V+ S+N+ + + K ++L I+ D LDM G E
Sbjct: 3 KEDATKPAVSG---SNSYNMAN--KTKALKILSKYIKESDILDMIG------------EG 45
Query: 89 IYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEP 148
+ ++K + ++ +R +A L+ KN L + I+ ++L M+ +
Sbjct: 46 LAIKYKEDNEKFNFHLRQILAGLR--KNKKLVDSLCSKKITPNELIEMSPD--------- 94
Query: 149 MTTFEMANDEMKTLRNKFIKESIDDAQLATVQGT-KTDLLKCGKCKKRNCTYNQVQTRSA 207
+MA++ +K ++ + IK+ D + + ++ KC KC R QTRSA
Sbjct: 95 ----DMADETVKEIKERIIKDEEDKKKPIDISKIPDSNEFKCSKCGSRKIQETLAQTRSA 150
Query: 208 DEPMT 212
DEPMT
Sbjct: 151 DEPMT 155
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 19 SSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASL 78
S ++ E +++ ED P P + + VR + + ++ DL + +
Sbjct: 458 SETENAEPHQQRAED--PGEQGMTPLDAGVRSTVVRAMQEVLWTRAQELPDLALRE-DEV 514
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E +A +EEA+++ ++T+ RYKN+ RS + NL+DP+N L ++ + L M++
Sbjct: 515 EAIAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSS 574
>gi|403349966|gb|EJY74429.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
Y ++ RS + NL D KN L + +SA +L + + A E M E
Sbjct: 420 YSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVK---KLASEWMK----QKREE 472
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
LR +K + D Q QG + +C +C + Y Q+Q ADEPMT + Y
Sbjct: 473 SLLRTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCY 530
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 19 SSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASL 78
S ++ E +++ ED P P + + VR + + ++ DL + +
Sbjct: 211 SETENAEPHQQRAED--PGEQGMTPLDAGVRSTVVRAMQEVLWTRAQELPDLALRE-DEV 267
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E +A +EEA+++ ++T+ RYKN+ RS + NL+DP+N L ++ + L M++
Sbjct: 268 EAIAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSS 327
>gi|403368207|gb|EJY83934.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 100 YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEM 159
Y ++ RS + NL D KN L + +SA +L + + A E M E
Sbjct: 420 YSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVK---KLASEWMK----QKREE 472
Query: 160 KTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFY 218
LR +K + D Q QG + +C +C + Y Q+Q ADEPMT + Y
Sbjct: 473 SLLRTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCY 530
>gi|365759673|gb|EHN01450.1| Bye1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 583
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D + EE A LE+ +Y EF D Y +VRS +NLKD KN L + I G
Sbjct: 262 DAILVSEEFAHNLEDELYRACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVIGGK 321
Query: 128 ISASKLATMTA 138
+ +KL + A
Sbjct: 322 LPLNKLVSKNA 332
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 40.0 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 19 SSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASL 78
S ++ E +++ ED P P + + VR + + ++ DL + +
Sbjct: 251 SETENAEPHQQRAED--PGEQGMTPLDAGVRSTVVRAMQEVLWTRAQELPDLALRE-DEV 307
Query: 79 EELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E +A +EEA+++ ++T+ RYKN+ RS + NL+DP+N L ++ + L M++
Sbjct: 308 EAIAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSS 367
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 40.0 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 637 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
Query: 138 A 138
+
Sbjct: 697 S 697
>gi|449015636|dbj|BAM79038.1| similar to transcription elongation factor TFIIS.h [Cyanidioschyzon
merolae strain 10D]
Length = 691
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 15/92 (16%)
Query: 50 TDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYN--EFKNTDNRYKNRVRSR 107
+ +R K R+ML +++ +A E+E A++ + K D+ Y+ R+R+
Sbjct: 213 VEPIRQKARQMLYEALR------------SPVAYEIESALFELMDHKVHDD-YRARLRNL 259
Query: 108 IANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+ANL+D +N L I G+IS S L M +E
Sbjct: 260 VANLRDQRNDELREAVISGSISPSTLCQMNSE 291
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 638 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 697
Query: 138 A 138
+
Sbjct: 698 S 698
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 637 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
Query: 138 A 138
+
Sbjct: 697 S 697
>gi|407397893|gb|EKF27919.1| hypothetical protein MOQ_008346 [Trypanosoma cruzi marinkellei]
Length = 713
Score = 40.0 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAI------- 128
+ E+ A LEE + N + R ++R RIA KDP NP R+ + AI
Sbjct: 465 GTAEKTAQTLEEKLEEALVNRNRRTAQKLRRRIAMEKDPDNPYADRDVLLDAILRYVPQK 524
Query: 129 -SAS---KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
S S L ++ + +P++ F+ A D+++ ++
Sbjct: 525 RSISLNFLLKSLPPSLSDFLPSKPLSIFQQAPDKIRVFEYRY 566
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 40.0 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 637 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
Query: 138 A 138
+
Sbjct: 697 S 697
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 40.0 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 130 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 189
Query: 138 A 138
+
Sbjct: 190 S 190
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 40.0 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 637 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
Query: 138 A 138
+
Sbjct: 697 S 697
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 95 NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
N Y ++R NLK KNP L G ++ ++L +M+ + E+
Sbjct: 157 NVKRDYVAKLRQLSFNLK--KNPDLRARVAGGGVTPAELCSMSVD-------------EL 201
Query: 155 ANDEMKTLRNKFIKESIDDAQLATVQGTKTD---LLKCGKCKKRNCTYNQVQTRSADEPM 211
A E++ R K + E DA+ D + CGKCK + + QTRS DEPM
Sbjct: 202 ATQEVQAERKK-MAEFQHDARSLDWDKKNRDRKTMYPCGKCKSTKVSNYEKQTRSGDEPM 260
Query: 212 T 212
T
Sbjct: 261 T 261
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 39.7 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 536 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMS 595
Query: 138 A 138
+
Sbjct: 596 S 596
>gi|401839212|gb|EJT42524.1| BYE1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 583
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 73 DGLASLEELATELEEAIYN-----EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
D + EE A LE+ +Y EF D Y +VRS +NLKD KN L I G
Sbjct: 262 DAILVSEEFAHNLEDELYRACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAQVIGGK 321
Query: 128 ISASKLATMTA 138
+ +KL + A
Sbjct: 322 LPLNKLVSKNA 332
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 39.7 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
+E +A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M+
Sbjct: 637 VEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMS 696
Query: 138 A 138
+
Sbjct: 697 S 697
>gi|448929196|gb|AGE52764.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CZ-2]
Length = 194
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL----HHFYI 219
+L C KCK R +Y ++QTRSADEP + H YI
Sbjct: 140 MLTCSKCKSRKTSYYEMQTRSADEPKMSWVEKHHAIYI 177
>gi|58269278|ref|XP_571795.1| RNA polymerase III smallest subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228031|gb|AAW44488.1| RNA polymerase III smallest subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 132
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDD---AQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
P ++ + ++R ++ +DD + A KTD C KC R + Q+Q
Sbjct: 25 PTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWANVDKTDT-ACPKCDHRRAYFRQMQI 83
Query: 205 RSADEPMTTLH 215
RSADEPMTT +
Sbjct: 84 RSADEPMTTFY 94
>gi|392575324|gb|EIW68458.1| hypothetical protein TREMEDRAFT_24045, partial [Tremella
mesenterica DSM 1558]
Length = 108
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLK--CGKCKKRNCTYNQVQTRSADE 209
+ +A + ++R ++ +DD D + C KC R Y Q+Q RSADE
Sbjct: 32 YNIAPGKQISMRTHLKRKQVDDVLGGKEAWANVDKIDATCPKCDARKAYYRQLQIRSADE 91
Query: 210 PMTTLH 215
PMTT +
Sbjct: 92 PMTTFY 97
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
++ ++ ++E +Y F +T +YK + R+ I N+KD KN L R+ + G IS L M+
Sbjct: 1296 VKRVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMS 1355
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
++ ++A+ E+ R + K +D
Sbjct: 1356 SD-------------QLASQELMKWREQEAKHELD 1377
>gi|313768016|ref|YP_004061447.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599623|gb|ADQ91644.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 171
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +C +CK T+ Q+QTRSADEPMT
Sbjct: 131 MFRCNRCKSYKTTFYQMQTRSADEPMTVF 159
>gi|321261337|ref|XP_003195388.1| RNA polymerase III smallest subunit [Cryptococcus gattii WM276]
gi|317461861|gb|ADV23601.1| RNA polymerase III smallest subunit, putative [Cryptococcus gattii
WM276]
Length = 131
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDD---AQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
P ++ + ++R ++ +DD + A KTD C KC R + Q+Q
Sbjct: 25 PTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWANVDKTDT-ACPKCDHRRAYFRQMQI 83
Query: 205 RSADEPMTTLH 215
RSADEPMTT +
Sbjct: 84 RSADEPMTTFY 94
>gi|134114353|ref|XP_774105.1| hypothetical protein CNBG4050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256738|gb|EAL19458.1| hypothetical protein CNBG4050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 132
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDD---AQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
P ++ + ++R ++ +DD + A KTD C KC R + Q+Q
Sbjct: 25 PTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWANVDKTDT-ACPKCDHRRAYFRQMQI 83
Query: 205 RSADEPMTTLH 215
RSADEPMTT +
Sbjct: 84 RSADEPMTTFY 94
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 30 KKEDKKPSVTQY-----PPQKSHNLTDSVRLKCR----EMLQNSI-QVGDLDMDGLASLE 79
KK++ KPS +Q P + +RL R E+L + I + DL + +
Sbjct: 1277 KKQEIKPSPSQSKLQIKPTPVRKPEAEPIRLNIRKTLTELLSSRIKETEDLKLTD-EEIA 1335
Query: 80 ELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
+LA +E +Y FK+T ++YK + RS + N+KD KN L R +++ + ++ +
Sbjct: 1336 DLAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPD 1395
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKC 192
EMA+ E+ R K K QL ++ + DL+ K
Sbjct: 1396 -------------EMASQELAEWREKETKH-----QLEMIKKNELDLMAQAKS 1430
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 50 TDSVRLKCR----EMLQNSI-QVGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRV 104
T+ +RL R E+L + I + DL + + +LA +E +Y FK+T +YK +
Sbjct: 1312 TEPIRLNIRKSLTELLSSRIKETEDLKLTD-EEIADLAFNIELEMYKYFKDTGAKYKAKY 1370
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS + N+KD KN L R +++ + ++ + EMA+ E+ R
Sbjct: 1371 RSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPD-------------EMASQELAEWRE 1417
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKC 192
K K QL ++ + DL+ K
Sbjct: 1418 KETKH-----QLEMIKKNELDLMAQAKS 1440
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 80 ELATELEEAIYNE-FKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
E+A +E A++ ++T Y RS + NL+DP+NP L + +SA L
Sbjct: 146 EIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAETLVK--- 202
Query: 139 EVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGKCKK 194
MT E+AN E+ R K ++ +DA L +G +++K K K
Sbjct: 203 ----------MTPAELANKELIEWRKKREEKIGEDAFL---KGVPLEMIKVEKDGK 245
>gi|448932235|gb|AGE55795.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 184
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 171 IDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
DA + +L+C KC + +Y ++QTRSADEPMT
Sbjct: 129 FSDASCMDPETMPDGMLQCKKCGSKKTSYYELQTRSADEPMTVF 172
>gi|340052391|emb|CCC46669.1| putative transcription elongation factor s-II [Trypanosoma vivax
Y486]
Length = 453
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 172 DDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
D +L+ T T L KC C K C++ + Q RSADEP T
Sbjct: 398 DQEKLSLANVTITSLFKCPNCGKNRCSFYEQQIRSADEPTT 438
>gi|312599164|gb|ADQ91187.1| hypothetical protein BpV2_020c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 171
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ +C +CK T+ Q+QTRSADEPMT
Sbjct: 131 MFRCNRCKSYKTTFYQMQTRSADEPMTVF 159
>gi|405121978|gb|AFR96746.1| RNA polymerase III smallest subunit [Cryptococcus neoformans var.
grubii H99]
Length = 118
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 148 PMTTFEMANDEMKTLRNKFIKESIDD---AQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 204
P ++ + ++R ++ +DD + A KTD C KC R + Q+Q
Sbjct: 27 PTCPYQFIIERQISMRTHLKRKEVDDVLGGKEAWANVDKTDT-ACPKCDHRRAYFRQMQI 85
Query: 205 RSADEPMTTLH 215
RSADEPMTT +
Sbjct: 86 RSADEPMTTFY 96
>gi|448926050|gb|AGE49628.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 221
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 181 MLQCRKCGSKKTSYYELQTRSADEPMTVF 209
>gi|448932545|gb|AGE56104.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448933221|gb|AGE56778.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-2]
gi|448936678|gb|AGE60225.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 221
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 181 MLQCRKCGSKKTSYYELQTRSADEPMTVF 209
>gi|155371687|ref|YP_001427221.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
gi|155125007|gb|ABT16874.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
Length = 221
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 181 MLQCRKCGSKKTSYYELQTRSADEPMTVF 209
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 51 DSVRLKCREMLQNSIQVGDLDMDG----LASLEELATELEEAIYNEFKNTDNRYKNRVRS 106
+ +R K R +Q ++++ + G L A +E A++ + T YK + R+
Sbjct: 365 EELRQKVRGGIQQALELVATEAAGEAGRLPEPAPTAEAVEAALFKLYGGTTKDYKQKFRT 424
Query: 107 RIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKF 166
NLKD NP L + + G I+ MTA T A++ + + A +E +
Sbjct: 425 LQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTA---TELANKELAAYRKAKEE------EA 475
Query: 167 IKESIDDAQ 175
+K S+ DA+
Sbjct: 476 LKMSVLDAE 484
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 78 LEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
++ ++ ++E +Y F +T +YK + R+ I N+KD KN L R+ + G IS L M+
Sbjct: 325 VKRVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMS 384
Query: 138 AE 139
++
Sbjct: 385 SD 386
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 47 HNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEELATELEEAIYN-EFKNTD---NRYKN 102
H ++VR RE L +++Q L D ++L+ A +E ++Y F D +RYK
Sbjct: 247 HPTRNAVRDLIREKLCDALQPHVLPGDKYSALD-AAIAIEHSMYQYRFFGKDESNSRYKG 305
Query: 103 RVRSRIANLKDPKNPMLSR 121
R RS + NL+D KNP L R
Sbjct: 306 RARSILFNLRDSKNPDLRR 324
>gi|448925723|gb|AGE49302.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 185
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 145 MLQCRKCGSKKTSYYELQTRSADEPMTVF 173
>gi|448936006|gb|AGE59555.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 180
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 140 MLQCRKCGSKKTSYYELQTRSADEPMTVF 168
>gi|448936359|gb|AGE59907.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 185
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L+C KC + +Y ++QTRSADEPMT
Sbjct: 145 MLQCRKCGSKKTSYYELQTRSADEPMTVF 173
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 79 EELATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
E+ +E +YN F + ++YK++ RS + N+KD KN L + +L MT
Sbjct: 1479 EQFVKSVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMT 1538
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
E E+A+ E+ R + + QL ++ ++ D+L C
Sbjct: 1539 PE-------------ELASQELAKWRQEEARH-----QLEIIEKSELDMLSC 1572
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 79 EELATELEEAIYNEFKNT---DNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
+++A E+E ++ +K Y + R + NL+D +N +L + G +SA+ L
Sbjct: 137 DQIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDRLMSGELSAAALVR 196
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIK----ESIDDA-QLATVQGTKTDLLKCG 190
M+A EMAN ++ R ++IK E + +A L ++ T++D+ +C
Sbjct: 197 MSAN-------------EMANPQLVKQRKQWIKKRTYEVMRNAPDLESL--TESDMFECR 241
Query: 191 KCKKRNCTYNQVQTRS 206
C Y Q + ++
Sbjct: 242 SCGCSRTRYRQWRRKA 257
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 17/99 (17%)
Query: 81 LATELEEAIYNEF----KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
L+ ++E +YN + T+ +Y+ + RS + NLKD KN L + + G +S +L M
Sbjct: 428 LSKDIELKLYNLHNQVPRETNQKYRVKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRM 487
Query: 137 TAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQ 175
+ E ++A+ E+ R K IK+ ++ Q
Sbjct: 488 SPE-------------QLASRELAEWREKTIKKELEMIQ 513
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 78 LEELATELEEAIYNEFKN--TDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
L EL ++E A++ ++ Y+ R RS NL KN L + G I+ + +A
Sbjct: 101 LFELGVKIERALFEAHGEDASNGEYRARARSIAFNLA--KNESLRVGALAGDIAPATIAR 158
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQG-TKTDLLKCGKCKK 194
MT + E+A ++M+ R K + + G T+TD C C+
Sbjct: 159 MTPD-------------ELATEDMRNARKKMEERLTRKRTRTNMDGATETDAFACAHCRS 205
Query: 195 RNCTYNQV 202
C Y +V
Sbjct: 206 TRCQYLRV 213
>gi|322694127|gb|EFY85965.1| PHD finger domain protein, putative [Metarhizium acridum CQMa 102]
Length = 832
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 79 EELATELEEAIYNEFKNTDNR--YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM 136
EE A ++E A+Y+ + + Y ++++S NLK+ NP + R + G S + LA M
Sbjct: 276 EEYALQIERAVYDTHPASKGQKEYNHQIKSLTFNLKN--NPEVMRGLLHGVHSPTTLAVM 333
Query: 137 TAEVQTRSADEPMTTFEM 154
T+E Q SA+ T EM
Sbjct: 334 TSE-QLASAELQKQTAEM 350
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 19/112 (16%)
Query: 79 EELATELEEAIYNEFK-NTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMT 137
E+ +E +YN F + ++YK++ RS + N+KD KN L + +L MT
Sbjct: 1481 EQFVKSVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMT 1540
Query: 138 AEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
E E+A+ E+ R + + QL ++ ++ D+L C
Sbjct: 1541 PE-------------ELASQELAKWREEEARH-----QLEIIEKSELDMLSC 1574
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE---- 80
EA+EE ++ Q +K +L VR +Q + ++ L EE
Sbjct: 577 EAEEEPLLERAEDSAQLQQEKP-SLYIGVRGTVVHSMQEVLWTRLRELPDLVLSEEVVKG 635
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M++
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSS 693
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE---- 80
EA+EE ++ Q +K +L VR +Q + ++ L EE
Sbjct: 577 EAEEEPLLERAEDSAQLQQEKP-SLYIGVRGTVVHSMQEVLWTRLRELPDLVLSEEVVKG 635
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M++
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSS 693
>gi|449684343|ref|XP_004210603.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Hydra magnipapillata]
Length = 74
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC+ + + Q+QTRSADEPMTT +
Sbjct: 36 KCPKCEFKKAYFMQIQTRSADEPMTTFY 63
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 25 EAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQVGDLDMDGLASLEE---- 80
EA+EE ++ Q +K +L VR +Q + ++ L EE
Sbjct: 577 EAEEEPLLERAEDSAQLQQEKP-SLYIGVRGTVVHSMQEVLWTRLRELPDLVLSEEVVKG 635
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M++
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSS 693
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 38.1 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 81 LATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTA 138
+A +E A+++ + T+ RYK + RS + NL+DP+N L + G ++ L M++
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSS 693
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 79 EELATELEEAIYNEF----KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
E LA +E ++++ + YKN+ RS + NLKD N + G +S +L
Sbjct: 124 ESLAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELI 183
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKT----LRNKFIKESI 171
M++E +MAN E+K+ LR K +K SI
Sbjct: 184 KMSSE-------------DMANPELKSKAEVLRQKSLKNSI 211
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 99 RYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDE 158
+YK + RS + NLKD NP L G +S +L +MT E + A + ++ + MA E
Sbjct: 1 KYKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIE---QLASKELSQWRMAKAE 57
>gi|261326497|emb|CBH09458.1| transcription elongation factor A protein 1,putative [Trypanosoma
brucei gambiense DAL972]
Length = 467
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
T L +C +C R C + ++Q RSADEP T
Sbjct: 424 TSLFECPECHGRECEWRELQIRSADEPTT 452
>gi|448933550|gb|AGE57106.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 221
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+L C KC + +Y ++QTRSADEPMT
Sbjct: 181 MLTCRKCGSKKTSYYELQTRSADEPMTVF 209
>gi|84043614|ref|XP_951597.1| transcription elongation factor S-II [Trypanosoma brucei TREU927]
gi|33348490|gb|AAQ15815.1| transcription elongation factor S-II, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359168|gb|AAX79612.1| transcription elongation factor S-II, putative [Trypanosoma brucei]
Length = 467
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
T L +C +C R C + ++Q RSADEP T
Sbjct: 424 TSLFECPECHGRECEWRELQIRSADEPTT 452
>gi|311977721|ref|YP_003986841.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|82000272|sp|Q5UQS8.1|TFS2_MIMIV RecName: Full=Transcription factor S-II-related protein
gi|55416958|gb|AAV50608.1| TFII-like transcription factor [Acanthamoeba polyphaga mimivirus]
gi|308204765|gb|ADO18566.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|351737490|gb|AEQ60525.1| TFII-like transcription factor [Acanthamoeba castellanii mamavirus]
Length = 173
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 175 QLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLHHFYI 219
Q+ATV+ C CK + + Q+QTRSADEPMTT FYI
Sbjct: 125 QMATVEWKP-----CYACKNTSYHFYQLQTRSADEPMTT---FYI 161
>gi|123425416|ref|XP_001306810.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121888405|gb|EAX93880.1| hypothetical protein TVAG_032660 [Trichomonas vaginalis G3]
Length = 256
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 184 TDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
+ L +C +CK N T+ VQTR DEPMT
Sbjct: 214 SGLFQCPRCKGNNTTHVAVQTRGGDEPMTNF 244
>gi|326434198|gb|EGD79768.1| hypothetical protein PTSG_10753 [Salpingoeca sp. ATCC 50818]
Length = 911
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 67 VGDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFG 126
VGDLD+D + + E+E+ + + + RY +R +++++DP N +L R G
Sbjct: 464 VGDLDIDAVVA------EIEKGAFLQHSDNKKRYLATIRRLVSHIRDPDNDLLHR-IASG 516
Query: 127 AISASKLATMTAE 139
+ LA++ E
Sbjct: 517 EVKPVALASLKPE 529
>gi|410902675|ref|XP_003964819.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Takifugu rubripes]
Length = 108
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTLH 215
C KC+ R + Q+QTRSADEPMTT +
Sbjct: 69 CPKCEHRRAFFMQIQTRSADEPMTTFY 95
>gi|403213818|emb|CCK68320.1| hypothetical protein KNAG_0A06630 [Kazachstania naganishii CBS
8797]
Length = 602
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Query: 80 ELATELEEAIYNEFKNTDNR-----YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
ELA +LE+ +YN + N ++ Y RVR+ +NLKD KN L + I +L
Sbjct: 245 ELAVQLEKELYNAWSNPNSDTVGKFYPERVRTIYSNLKDKKNSELKSQVVNRQIPFDELV 304
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
M A ++AN ++++ + K ES++
Sbjct: 305 KMDAS-------------KLANPDLQSFKQKVDTESLN 329
>gi|565273|dbj|BAA04186.1| transcription elongation factor SII [Chlorella virus]
Length = 172
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 186 LLKCGKCKKRNCTYNQVQTRSADEP 210
+L+CGKCK R +Y ++Q R++DEP
Sbjct: 140 MLQCGKCKSRKTSYYEMQCRASDEP 164
>gi|342873110|gb|EGU75339.1| hypothetical protein FOXB_14149 [Fusarium oxysporum Fo5176]
Length = 1501
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 68 GDLDMDGLASLEEL----ATELEEAIYNEFKNTDNR--YKNRVRSRIANLKDPKNPMLSR 121
G+LD++ ++E + + ++E A+Y+ + T + Y +++S NLK+ NP L
Sbjct: 308 GELDLEEGNTIESMTETFSLQIERAVYDSYPVTKGQKEYNQQIKSLSFNLKN--NPELCH 365
Query: 122 NYIFGAISASKLATMTAEVQTRSADEPMTTFEM 154
+ +S + LATMT+E Q S++ T EM
Sbjct: 366 GLVHKTLSPAALATMTSE-QLASSEMKKQTAEM 397
>gi|343474640|emb|CCD13763.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 183
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 153 EMANDEMKTLRNKFIKESIDDAQLATVQGTK-TDLLKCGKCKKRNCTYNQVQTRSADEPM 211
E+ +E K L + I + I++ + ++ T L KC C + C++ + Q RSADEP
Sbjct: 108 ELMTEEEKQLEEQRITKIIEEQEKVSLANVAVTSLFKCPACGENRCSFYEQQIRSADEPT 167
Query: 212 T 212
T
Sbjct: 168 T 168
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 76 ASLEELATELEEAIYNEF-KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
A +E +E +YN F ++ +YK++ RS + N+KD KN L + +L
Sbjct: 1357 AEVEHFVKRVESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLV 1416
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
MT E+A+ E+ R E + QL ++ ++ DLL C +
Sbjct: 1417 RMTPA-------------ELASQELAKWR-----EEENRHQLDMIKKSELDLLSCAQ 1455
>gi|302403747|ref|XP_002999712.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361468|gb|EEY23896.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 826
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 76 ASLEEL-ATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
A+L EL A ++E A+ + + ++Y NR R+ ++NLK NP LS + +S LA
Sbjct: 276 AALSELWAIQIERAVRDSHPDA-SQYSNRCRTLVSNLK--ANPELSMGLLHSTLSPPMLA 332
Query: 135 TMTAE 139
MT++
Sbjct: 333 VMTSD 337
>gi|393234028|gb|EJD41594.1| hypothetical protein AURDEDRAFT_138547 [Auricularia delicata
TFB-10046 SS5]
Length = 97
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTLHHF 217
L C KC+ +NQ+Q RSADEPMT + +
Sbjct: 57 LPCPKCEHNKAFFNQMQIRSADEPMTIFYKY 87
>gi|407037073|gb|EKE38471.1| RNA polymerase III subunit, putative [Entamoeba nuttalli P19]
Length = 107
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 162 LRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
L+ K I + + Q Q KT+++ C KC + + Q+Q RSADEPMTT +
Sbjct: 43 LKRKQIDAVLGEEQWKNAQ--KTEII-CEKCGHNSAYFMQIQIRSADEPMTTFY 93
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 50 TDSVRLKCREMLQNSIQ--VGDLDMDGLASLEE-----LATELEEAIYNEFKNTDNRYKN 102
+D+ R K +E+L ++ + D D +A + + +A +E ++ ++ ++ K
Sbjct: 196 SDATRDKIKEILHEALSKVTREADEDLVAVVNDSDPIRVAVTVESVLFEKWGPSNGAQKV 255
Query: 103 RVRSRIANLKDPKNPMLSRNYIFGAISASKLATM-TAEVQT 142
+ RS + NLKD NP R + G + +L M TAE+ +
Sbjct: 256 KYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMAS 296
>gi|67477563|ref|XP_654238.1| RNA polymerase III subunit [Entamoeba histolytica HM-1:IMSS]
gi|56471268|gb|EAL48851.1| RNA polymerase III subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449706368|gb|EMD46228.1| RNA polymerase III subunit, putative [Entamoeba histolytica KU27]
Length = 107
Score = 37.0 bits (84), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 162 LRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
L+ K I + + Q Q KT+++ C KC + + Q+Q RSADEPMTT +
Sbjct: 43 LKRKQIDAVLGEEQWKNAQ--KTEII-CEKCGHNSAYFMQIQIRSADEPMTTFY 93
>gi|442753419|gb|JAA68869.1| Putative rna polymerase iii [Ixodes ricinus]
Length = 108
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCSHERAYFMQIQTRSADEPMTTFY 95
>gi|167391478|ref|XP_001739791.1| DNA-directed RNA polymerase III subunit RPC10 [Entamoeba dispar
SAW760]
gi|165896395|gb|EDR23814.1| DNA-directed RNA polymerase III subunit RPC10, putative [Entamoeba
dispar SAW760]
Length = 107
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 162 LRNKFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
L+ K I + + Q Q KT+++ C KC + + Q+Q RSADEPMTT +
Sbjct: 43 LKRKQIDAVLGEEQWKNAQ--KTEII-CEKCGYNSAYFMQIQIRSADEPMTTFY 93
>gi|366987475|ref|XP_003673504.1| hypothetical protein NCAS_0A05630 [Naumovozyma castellii CBS 4309]
gi|342299367|emb|CCC67121.1| hypothetical protein NCAS_0A05630 [Naumovozyma castellii CBS 4309]
Length = 602
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 80 ELATELEEAIYNEFKNTDNR-----YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLA 134
ELAT+LE+ + + + +N Y RVRS ANLKD KN L + I + +KL
Sbjct: 258 ELATKLEKELSLAWFDMENDKLSKFYPERVRSLFANLKDSKNISLKSHVINETLDYAKLV 317
Query: 135 TMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
M A E+AN +++ + K E+++ QL + TK +K K
Sbjct: 318 RMNAT-------------ELANPDLQHFKEKVDTETLN--QLIIEKPTKPLYIKTHK 359
>gi|451927375|gb|AGF85253.1| transcription factor [Moumouvirus goulette]
Length = 170
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTLH 215
C CK Y Q+QTRSADEPMTT +
Sbjct: 131 CRACKNTEYFYRQLQTRSADEPMTTFY 157
>gi|441432414|ref|YP_007354456.1| TFII-like transcription factor [Acanthamoeba polyphaga moumouvirus]
gi|371944878|gb|AEX62699.1| transcription factor S-II-related protein [Moumouvirus Monve]
gi|440383494|gb|AGC02020.1| TFII-like transcription factor [Acanthamoeba polyphaga moumouvirus]
Length = 170
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTLH 215
C CK Y Q+QTRSADEPMTT +
Sbjct: 131 CRACKNTEYFYRQLQTRSADEPMTTFY 157
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 37.0 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 42 PPQKSHNLTDSVRLKCREMLQNSIQ--VGDLDMDG----LASLEELATELEEAIYNEFKN 95
P S D VR K RE L +++Q + +L +G L +A ++E +Y N
Sbjct: 396 PSAGSVGNDDEVRSKVREQLASALQRALDELKAEGYTEALPDPAAVAADVETELYKLHDN 455
Query: 96 TDNR-YKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATM-TAEVQTRSADE 147
+ ++ YK + RS NL+D NP L + G + +L T+ AE+ + E
Sbjct: 456 SVSKDYKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSE 509
>gi|403352044|gb|EJY75527.1| DNA-directed RNA polymerase subunit [Oxytricha trifallax]
Length = 106
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+C KC R + Q+Q RSADEPMTT +
Sbjct: 67 ECHKCGNRRAYFMQIQIRSADEPMTTFY 94
>gi|346470135|gb|AEO34912.1| hypothetical protein [Amblyomma maculatum]
Length = 108
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCSHERAYFMQIQTRSADEPMTTFY 95
>gi|260829971|ref|XP_002609935.1| hypothetical protein BRAFLDRAFT_114926 [Branchiostoma floridae]
gi|229295297|gb|EEN65945.1| hypothetical protein BRAFLDRAFT_114926 [Branchiostoma floridae]
Length = 108
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC+ + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCEHPRAYFMQIQTRSADEPMTTFY 95
>gi|170097063|ref|XP_001879751.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645154|gb|EDR09402.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 106
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 152 FEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLK--CGKCKKRNCTYNQVQTRSADE 209
+E + T R + +++ +DD D + C KC + Q+Q RSADE
Sbjct: 29 YEFPISKQMTSRTRLVRKQVDDVLGGDEMWAHADQTQASCDKCNHDQAYFYQLQIRSADE 88
Query: 210 PMTTLH 215
PMTT +
Sbjct: 89 PMTTFY 94
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ-V 67
+PP + ++ +E ++ ED P P + + VR +E+L +Q +
Sbjct: 318 SPPASCQSDFMETESEEPLQQGTED--PGEQDTMPLDAGVRSTVVR-TMQEVLWTRVQEL 374
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
DL + + +A ++E A+++ ++T+ RYK + RS + NLKDP+N L
Sbjct: 375 PDLPLRK-EEVASIAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCD 433
Query: 128 ISASKLATMTA 138
+S L M++
Sbjct: 434 VSPQDLVQMSS 444
>gi|36938592|gb|AAQ86835.1| RNA polymerase III [Ixodes scapularis]
Length = 108
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCGHERAYFMQIQTRSADEPMTTFY 95
>gi|241012140|ref|XP_002405456.1| RNA polymerase III [Ixodes scapularis]
gi|215491748|gb|EEC01389.1| RNA polymerase III [Ixodes scapularis]
Length = 109
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 69 KCPKCGHERAYFMQIQTRSADEPMTTFY 96
>gi|392585297|gb|EIW74637.1| hypothetical protein CONPUDRAFT_113195 [Coniophora puteana
RWD-64-598 SS2]
Length = 106
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 129 SASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTD--L 186
+ + L ++AE +E + T R K ++ +DD D
Sbjct: 6 TCANLLVISAETGYNKWACNTCAYEFPITKQMTSRTKMKRKQVDDVLGGDEMWKHADSTA 65
Query: 187 LKCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+ C KC + Q+Q RSADEPMTT +
Sbjct: 66 ISCDKCNHGRAYFYQLQIRSADEPMTTFY 94
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQ-V 67
+PP + ++ +E ++ ED P P + + VR +E+L +Q +
Sbjct: 319 SPPASCQSDFMETESEEPLQQGTED--PGEQDTMPLDAGVRSTVVR-TMQEVLWTRVQEL 375
Query: 68 GDLDMDGLASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGA 127
DL + + +A ++E A+++ ++T+ RYK + RS + NLKDP+N L
Sbjct: 376 PDLPLRK-EEVASIAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCD 434
Query: 128 ISASKLATMTA 138
+S L M++
Sbjct: 435 VSPQDLVQMSS 445
>gi|391345184|ref|XP_003746871.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Metaseiulus occidentalis]
Length = 108
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 171 IDDAQLATVQGTKTDLLK--CGKCKKRNCTYNQVQTRSADEPMTTLH 215
IDD +T D + C KC+ + Q+QTRSADEPMTT +
Sbjct: 49 IDDILGSTAAWANVDSTEEACPKCEHPRAFFRQMQTRSADEPMTTFY 95
>gi|365991701|ref|XP_003672679.1| hypothetical protein NDAI_0K02450 [Naumovozyma dairenensis CBS 421]
gi|343771455|emb|CCD27436.1| hypothetical protein NDAI_0K02450 [Naumovozyma dairenensis CBS 421]
Length = 667
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 81 LATELEEAIYN-EFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLATMTAE 139
L +EL +A ++ E Y +VR+ +NLKDPKN L + I +I SKL M+
Sbjct: 281 LESELYKAWFDMEHDKLSKYYPEKVRNLFSNLKDPKNLNLKSHVINQSIPMSKLVRMSVS 340
Query: 140 VQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKCGK 191
E+AN +++ + K +S++ QL TK +K K
Sbjct: 341 -------------ELANPDLQQFKEKVNTDSLN--QLVIEAPTKPKYIKTHK 377
>gi|209732138|gb|ACI66938.1| DNA-directed RNA polymerase III subunit RPC10 [Salmo salar]
Length = 93
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC+ + Q+QTRSADEPMTT +
Sbjct: 53 KCPKCEHPRAFFMQIQTRSADEPMTTFY 80
>gi|340372557|ref|XP_003384810.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Amphimedon queenslandica]
Length = 108
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCSHPKAYFMQIQTRSADEPMTTFY 95
>gi|290985184|ref|XP_002675306.1| predicted protein [Naegleria gruberi]
gi|284088901|gb|EFC42562.1| predicted protein [Naegleria gruberi]
Length = 109
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 168 KESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTL 214
K+ +DD ++T KCGKC + QTRSADEPMT
Sbjct: 50 KKEVDDVIDDEANWSETVETKCGKCDHNKAYFQMFQTRSADEPMTQF 96
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 26 AKEEKKEDKKPSVTQY--PPQKSHNLTDSVRLKCREMLQNSIQV---------GDLDMDG 74
+++E++++K P ++ P + ++ +R+ R L+ + D +
Sbjct: 1256 SRKEREKEKAPVASRVASPVRAGSTKSEPIRVNVRRTLKEQLLARIKEAQEANKDKAIKW 1315
Query: 75 LASLE--ELATELEEAIYNEF-KNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISAS 131
L SLE + A +E +Y+ F ++ +YK++ RS + N+KD KN L +
Sbjct: 1316 LTSLEVEQFAKSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPK 1375
Query: 132 KLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQLATVQGTKTDLLKC 189
+L MT E ++A+ E+ R E + QL ++ ++ D+L C
Sbjct: 1376 QLVRMTPE-------------QLASQELAKWR-----EEENRHQLDMIKKSELDMLSC 1415
>gi|242011387|ref|XP_002426432.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative
[Pediculus humanus corporis]
gi|212510537|gb|EEB13694.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide, putative
[Pediculus humanus corporis]
Length = 108
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+C KC + Q+QTRSADEPMTT +
Sbjct: 68 RCPKCSHSRAYFMQIQTRSADEPMTTFY 95
>gi|440291488|gb|ELP84757.1| DNA-directed RNA polymerase III subunit RPC10, putative [Entamoeba
invadens IP1]
Length = 107
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 161 TLRNKFIKESI-DDAQLATVQG-------TKTDLLKCGKCKKRNCTYNQVQTRSADEPMT 212
T K + ES+ QL V G KTD+ C KC + Q+Q RSADEPMT
Sbjct: 32 TFNKKIVYESVLKKKQLDAVLGEEQWKNAQKTDI-NCEKCGFGQAYFMQIQIRSADEPMT 90
Query: 213 TLH 215
T +
Sbjct: 91 TFY 93
>gi|388855201|emb|CCF51095.1| uncharacterized protein [Ustilago hordei]
Length = 1089
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 76 ASLEELATELEEAIYNEFKNTDNRYKNRVRSRIANLKDPKNPMLSRNYIFGAISASKLAT 135
A LEE E ++ + +YK+R R+ + +LKD KN L G + AS+LA
Sbjct: 363 ALLEEELFETNADLHGSIRIVGTKYKDRFRTFLFSLKDAKNTTLHSRIATGDLKASELAK 422
Query: 136 MTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESIDDAQL 176
M+ E E+AND ++ K E++ + L
Sbjct: 423 MSNE-------------ELANDAIRQATEKARLEALHRSTL 450
>gi|427786159|gb|JAA58531.1| Putative rna polymerase iii subunit c11 [Rhipicephalus pulchellus]
Length = 108
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCSHGRAYFMQIQTRSADEPMTTFY 95
>gi|194753758|ref|XP_001959177.1| GF12752 [Drosophila ananassae]
gi|190620475|gb|EDV35999.1| GF12752 [Drosophila ananassae]
Length = 342
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
+C +C + + Q+QTRSADEPMTT +
Sbjct: 68 ECPQCSHKRAYFMQLQTRSADEPMTTFY 95
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRN 164
RS + N+KD N R + G I + +MT +MA+++ K
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFS-------------DMASEQRKKETE 47
Query: 165 KFIKESIDDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQ 203
+S+ + +L TD KCGKC +R TY++ +
Sbjct: 48 GIKAKSMFECELGATAVASTDQFKCGKCLQRKTTYSRCR 86
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 36.2 bits (82), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 33/199 (16%)
Query: 8 PAPPGISNNKDSSSKKKEAKEEKKEDKKPSVTQYPPQKSHNLTDSVRLKCREMLQNSIQV 67
P P + N S + ++ KE P V P +S + VR+ R L++ +
Sbjct: 1226 PQPTTVHANTLGISSVRPLAKKDKEKPIPPVQAPVPNRSAGKPEPVRIGIRRSLRDQLLA 1285
Query: 68 ------------GDLDMDGLASLE--ELATELEEAIYNEF-KNTDNRYKNRVRSRIANLK 112
G L +LE + +E ++N F ++ +YK + RS + N+K
Sbjct: 1286 RIKEAQAAEENSGQAPTQWLTALEVDQFVKSVELEMFNSFGRDVGAKYKAKYRSLMFNIK 1345
Query: 113 DPKNPMLSRNYIFGAISASKLATMTAEVQTRSADEPMTTFEMANDEMKTLRNKFIKESID 172
D KN L + +L MT E ++A+ E+ R E +
Sbjct: 1346 DRKNRTLFEKICAKQVEPKQLVRMTPE-------------QLASQELAKWR-----EEEN 1387
Query: 173 DAQLATVQGTKTDLLKCGK 191
QL ++ ++ D+L C +
Sbjct: 1388 RHQLDMIKKSELDMLACAQ 1406
>gi|281207317|gb|EFA81500.1| RNA polymerase II elongation factor [Polysphondylium pallidum
PN500]
Length = 275
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 9 APPGISNNKDSSSKKKEAKEEKKEDKKPSVTQ------YPP------QKSHN-------- 48
+PP S+ S +K + K+EKKE++ S Y P Q S +
Sbjct: 118 SPPQSSSLTPSLKRKLDIKDEKKENEDGSSASTTAAKPYSPISVKKQQSSRSTSYSTELP 177
Query: 49 -LTDSVRLKCREMLQNSIQVGDLDMDGLASL---EELATELEEAIYNEFKNTDNRYKNRV 104
L+D R K +++ +S++ D G+ +L + A +E +YN F Y+ +
Sbjct: 178 YLSDDTRAKTMKLIADSLE----DKSGVETLMHHNQAAAAIESEMYNIFNGPTTEYRTKA 233
Query: 105 RSRIANLKDPKNPMLSRNYIFGAISASKLATMTAEV 140
RS I NLK +N L + + IS ++ +M + V
Sbjct: 234 RSIIFNLK--QNKALRDSILSAEISITRFCSMDSNV 267
>gi|198458321|ref|XP_001360991.2| GA17233 [Drosophila pseudoobscura pseudoobscura]
gi|198136301|gb|EAL25567.2| GA17233 [Drosophila pseudoobscura pseudoobscura]
Length = 335
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTLH 215
C C + + Q+QTRSADEPMTT +
Sbjct: 69 CPSCSHKRAYFMQIQTRSADEPMTTFY 95
>gi|225717070|gb|ACO14381.1| DNA-directed RNA polymerase III subunit RPC10 [Esox lucius]
Length = 108
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 188 KCGKCKKRNCTYNQVQTRSADEPMTTLH 215
KC KC+ + Q+QTRSADEPMTT +
Sbjct: 68 KCPKCEHPRAYFMQIQTRSADEPMTTFY 95
>gi|195154030|ref|XP_002017926.1| GL17434 [Drosophila persimilis]
gi|194113722|gb|EDW35765.1| GL17434 [Drosophila persimilis]
Length = 335
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 189 CGKCKKRNCTYNQVQTRSADEPMTTLH 215
C C + + Q+QTRSADEPMTT +
Sbjct: 69 CPSCSHKRAYFMQIQTRSADEPMTTFY 95
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.127 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,126,958,085
Number of Sequences: 23463169
Number of extensions: 114010899
Number of successful extensions: 587642
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 307
Number of HSP's that attempted gapping in prelim test: 584489
Number of HSP's gapped (non-prelim): 2506
length of query: 221
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 84
effective length of database: 9,144,741,214
effective search space: 768158261976
effective search space used: 768158261976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)