RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9963
         (800 letters)



>d1dmta_ d.92.1.4 (A:) Neutral endopeptidase (neprilysin) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 696

 Score =  480 bits (1235), Expect = e-160
 Identities = 224/705 (31%), Positives = 349/705 (49%), Gaps = 39/705 (5%)

Query: 1   MDPGVQPCDNFYKFACGNFLKTSVIPPDRASVSTFSKIEDRLSSQIKTVLEEPQSASGPH 60
           MD   +PC +F+K+ACG +LK +VIP   +    F  + D L   +K VL+EP++     
Sbjct: 19  MDATTEPCTDFFKYACGGWLKRNVIPETSSRYGNFDILRDELEVVLKDVLQEPKTEDIV- 77

Query: 61  IFNLMKKFYATCMDEDTLDKLGVQPMKVIIEQLGGLPVVDGDRWDSSRFSW-INTTYKLR 119
                K  Y +C++E  +D  G +P+  ++  + G PV   +       SW         
Sbjct: 78  AVQKAKALYRSCINESAIDSRGGEPLLKLLPDIYGWPVATENWEQKYGASWTAEKAIAQL 137

Query: 120 DLGFNHNLLINIVFCKQTQHPINTTQIPGAGPDFKNSTRRRLLIDQVD--LKPLEDFLRE 177
           +  +   +LIN+                  G D KNS    + IDQ    L   + +   
Sbjct: 138 NSKYGKKVLINL----------------FVGTDDKNSVNHVIHIDQPRLGLPSRDYYECT 181

Query: 178 GWRNKNVRAYHSYMVKTAVL------FGAPVSRAFRELKDSIDFEITMTKFIVPDQELRN 231
           G   +   AY  +M+  A L           ++   E+   ++ E  +       ++  +
Sbjct: 182 GIYKEACTAYVDFMISVARLIRQEERLPIDENQLALEMNKVMELEKEIANATAKPEDRND 241

Query: 232 LSYLYNLMSVHTLNKYYPSIPCFYLEIDGPSLNKKLEFLNRIIGP-KISIDSEELVMVTQ 290
              LYN M++  +   +       LEI+G   +  L F N I+    ISI +EE V+V  
Sbjct: 242 PMLLYNKMTLAQIQNNFS------LEINGKPFSW-LNFTNEIMSTVNISITNEEDVVVYA 294

Query: 291 PKYMSSIERLVQITPKRILANYMLMQTVLSSSAYLCKSARRPYHDFKYVLTGVNSTRIRS 350
           P+Y++ ++ ++     R L N M  + ++   + L ++ +   + F+  L G  S     
Sbjct: 295 PEYLTKLKPILTKYSARDLQNLMSWRFIMDLVSSLSRTYKESRNAFRKALYGTTSETATW 354

Query: 351 QRCVDEVAEKFSLAVGSLYVRHFFDRTSKENALELVNNLRQEMDYILQNVSWMDPQTKKN 410
           +RC + V      AVG LYV   F   SK    +L+  +R+     L +++WMD +TKK 
Sbjct: 355 RRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKR 414

Query: 411 ALEKSKVLKVHIGYPDELLDDD-KIDLHYKDLRIVPGDLLTSVLNLYKKSVDYAYTQLHE 469
           A EK+  +K  IGYPD+++ +D K++  Y +L     +   +++   K S      +L E
Sbjct: 415 AEEKALAIKERIGYPDDIVSNDNKLNNEYLELNYKEDEYFENIIQNLKFSQSKQLKKLRE 474

Query: 470 PINKTSWKEFGSVATVNAFNHIDKNAIEFPAGILQEPYFAADRPCFLNYGAIGTVIGHEI 529
            ++K  W      A VNAF    +N I FPAGILQ P+F+A +   LNYG IG VIGHEI
Sbjct: 475 KVDKDEW--ISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYGGIGMVIGHEI 532

Query: 530 THTFDDEGSQYDKFGNVMNWWDDESKMRYNEKASCIIKQYSNYVIEDI-GFRINGITTQG 588
           TH FDD G  ++K G++++WW  +S   + E++ C++ QY N+  +   G  +NGI T G
Sbjct: 533 THGFDDNGRNFNKDGDLVDWWTQQSASNFKEQSQCMVYQYGNFSWDLAGGQHLNGINTLG 592

Query: 589 ENIADNGGVKESYRAYLECAKQKNAEYKLPGLENFSDKQMFWISFANVWCTKYRKEAMEL 648
           ENIADNGG+ ++YRAY    K+   E  LPGL + + KQ+F+++FA VWC  YR E    
Sbjct: 593 ENIADNGGLGQAYRAYQNYIKKNGEEKLLPGL-DLNHKQLFFLNFAQVWCGTYRPEYAVN 651

Query: 649 LFKNDDHPPAEIRVNGPLSNSYDFARDFQCYSGSKMNPKHKCEVW 693
             K D H P   R+ G L NS +F+  F C   S MNP+ KC VW
Sbjct: 652 SIKTDVHSPGNFRIIGTLQNSAEFSEAFHCRKNSYMNPEKKCRVW 696



 Score = 68.5 bits (166), Expect = 2e-12
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 701 RIRSQRCVDEVAEKFSLAVGSLYVRHFFDRTSKENALELVNNLRQEMDYILQNVSWMDPQ 760
               +RC + V      AVG LYV   F   SK    +L+  +R+     L +++WMD +
Sbjct: 351 TATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAE 410

Query: 761 TKKNALEKSKVLKVHIGYPDELLDDD-KIDLHYKDLRI 797
           TKK A EK+  +K  IGYPD+++ +D K++  Y +L  
Sbjct: 411 TKKRAEEKALAIKERIGYPDDIVSNDNKLNNEYLELNY 448


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0527    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,110,197
Number of extensions: 151368
Number of successful extensions: 290
Number of sequences better than 10.0: 1
Number of HSP's gapped: 282
Number of HSP's successfully gapped: 6
Length of query: 800
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 707
Effective length of database: 1,130,706
Effective search space: 799409142
Effective search space used: 799409142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.2 bits)