Query psy9964
Match_columns 595
No_of_seqs 635 out of 4623
Neff 10.0
Searched_HMMs 29240
Date Sat Aug 17 00:10:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9964.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9964hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa1_A PGAE, polyketide oxygen 100.0 3.3E-33 1.1E-37 295.0 27.7 286 164-493 98-387 (500)
2 2qa2_A CABE, polyketide oxygen 100.0 2.1E-33 7.1E-38 296.5 26.2 287 163-493 98-388 (499)
3 3fmw_A Oxygenase; mithramycin, 100.0 1.1E-33 3.7E-38 302.4 22.2 289 163-494 139-434 (570)
4 2x3n_A Probable FAD-dependent 100.0 1.6E-32 5.4E-37 283.5 24.7 299 135-476 70-381 (399)
5 3rp8_A Flavoprotein monooxygen 100.0 7.5E-32 2.6E-36 279.2 24.4 304 128-471 80-388 (407)
6 1k0i_A P-hydroxybenzoate hydro 100.0 1.8E-31 6E-36 275.3 19.5 316 132-489 65-389 (394)
7 1pn0_A Phenol 2-monooxygenase; 100.0 6.6E-30 2.2E-34 278.1 26.9 294 128-457 70-427 (665)
8 4hb9_A Similarities with proba 100.0 1.4E-30 4.9E-35 270.2 13.7 254 164-451 104-382 (412)
9 3ihg_A RDME; flavoenzyme, anth 100.0 5.9E-29 2E-33 266.2 21.3 252 164-455 112-375 (535)
10 2r0c_A REBC; flavin adenine di 100.0 2.8E-28 9.4E-33 260.9 25.0 260 164-472 130-409 (549)
11 2vou_A 2,6-dihydroxypyridine h 100.0 5.6E-28 1.9E-32 249.0 22.8 270 138-456 71-371 (397)
12 2dkh_A 3-hydroxybenzoate hydro 100.0 1.2E-27 4.2E-32 260.1 25.7 292 128-456 90-417 (639)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.1E-27 3.8E-32 245.3 17.0 264 132-446 72-343 (379)
14 3c96_A Flavin-containing monoo 99.9 7.3E-27 2.5E-31 241.7 22.6 279 132-447 66-366 (410)
15 3e1t_A Halogenase; flavoprotei 99.9 6.5E-26 2.2E-30 240.9 23.2 265 162-457 101-373 (512)
16 2xdo_A TETX2 protein; tetracyc 99.9 4E-26 1.4E-30 235.2 19.8 290 131-461 89-394 (398)
17 3oz2_A Digeranylgeranylglycero 99.9 5.7E-25 2E-29 226.7 25.8 272 140-453 71-350 (397)
18 3cgv_A Geranylgeranyl reductas 99.9 1.1E-24 3.6E-29 224.8 23.1 273 140-455 71-352 (397)
19 3atr_A Conserved archaeal prot 99.9 1.3E-24 4.5E-29 227.6 23.5 248 165-455 93-357 (453)
20 3i3l_A Alkylhalidase CMLS; fla 99.9 1.1E-24 3.6E-29 233.2 20.9 261 163-457 119-387 (591)
21 3c4a_A Probable tryptophan hyd 99.9 7.5E-25 2.6E-29 224.2 14.3 252 165-470 91-353 (381)
22 3nix_A Flavoprotein/dehydrogen 99.9 8E-23 2.7E-27 212.5 25.9 280 163-490 97-386 (421)
23 2gmh_A Electron transfer flavo 99.9 4.8E-22 1.6E-26 213.4 18.5 254 165-454 137-426 (584)
24 2weu_A Tryptophan 5-halogenase 99.9 3.8E-21 1.3E-25 204.6 24.8 242 163-456 164-410 (511)
25 2pyx_A Tryptophan halogenase; 99.9 3.5E-21 1.2E-25 205.1 19.5 244 163-454 166-416 (526)
26 2aqj_A Tryptophan halogenase, 99.9 2.4E-20 8.3E-25 199.3 22.2 237 163-452 156-398 (538)
27 2e4g_A Tryptophan halogenase; 99.8 8.2E-20 2.8E-24 195.4 23.8 240 163-455 185-432 (550)
28 3ihm_A Styrene monooxygenase A 99.8 1.5E-18 5E-23 180.1 16.3 273 163-485 113-406 (430)
29 2bry_A NEDD9 interacting prote 99.6 7.6E-15 2.6E-19 154.5 14.8 251 167-442 161-451 (497)
30 3iek_A Ribonuclease TTHA0252; 99.4 2.1E-13 7.1E-18 140.4 8.9 100 4-110 1-100 (431)
31 2i7t_A Cleavage and polyadenyl 99.4 5.2E-13 1.8E-17 139.2 9.3 101 3-108 11-111 (459)
32 3zq4_A Ribonuclease J 1, RNAse 99.4 6.9E-13 2.4E-17 140.3 8.6 102 1-107 6-111 (555)
33 1yvv_A Amine oxidase, flavin-c 99.3 3.8E-11 1.3E-15 120.1 19.4 195 186-417 119-328 (336)
34 3bk2_A RNAse J, metal dependen 99.3 1.2E-12 4E-17 139.3 8.1 103 1-106 14-123 (562)
35 2az4_A Hypothetical protein EF 99.3 3.3E-12 1.1E-16 132.3 9.5 96 3-102 6-122 (429)
36 2xr1_A Cleavage and polyadenyl 99.3 3.1E-12 1.1E-16 137.9 9.1 100 3-107 183-283 (640)
37 2cbn_A Ribonuclease Z; phospho 99.3 2.6E-12 9E-17 126.8 7.9 92 4-105 2-107 (306)
38 2ycb_A Beta-CAsp RNAse, cleava 99.3 2.7E-12 9.4E-17 138.6 7.9 102 3-107 179-280 (636)
39 3zwf_A Zinc phosphodiesterase 99.3 2.2E-12 7.6E-17 129.8 6.5 93 4-106 1-107 (368)
40 1y44_A Ribonuclease Z; zinc-de 99.2 1.1E-11 3.6E-16 123.2 8.1 91 4-104 1-104 (320)
41 3af5_A Putative uncharacterize 99.2 8.8E-12 3E-16 134.8 7.5 102 3-108 188-296 (651)
42 1zkp_A Hypothetical protein BA 99.2 1.8E-11 6.1E-16 118.2 8.8 87 3-100 24-124 (268)
43 3g1p_A Protein PHNP; C-P lyase 99.2 1.9E-11 6.4E-16 117.2 6.0 82 2-97 1-105 (258)
44 2i7x_A Protein CFT2; polyadeny 99.2 1.3E-11 4.6E-16 133.8 5.1 98 4-107 1-104 (717)
45 2zwr_A Metallo-beta-lactamase 99.2 2.3E-11 7.8E-16 112.5 5.5 85 3-102 2-86 (207)
46 3dha_A N-acyl homoserine lacto 99.1 8.2E-12 2.8E-16 119.6 2.2 95 1-100 5-135 (254)
47 3aj3_A MLR6805 protein, 4-pyri 99.1 1.3E-11 4.4E-16 119.7 3.6 95 1-100 1-123 (274)
48 3md7_A Beta-lactamase-like; ss 99.1 3.5E-11 1.2E-15 117.6 5.8 89 3-103 28-145 (293)
49 3jxp_A Coenzyme PQQ synthesis 99.1 1.7E-11 5.8E-16 120.7 3.3 89 1-102 1-122 (321)
50 3m8t_A 'BLR6230 protein; subcl 99.1 6.1E-11 2.1E-15 116.2 4.3 86 6-101 47-132 (294)
51 3adr_A Putative uncharacterize 99.1 4.5E-10 1.5E-14 107.9 10.0 86 1-101 1-89 (261)
52 1k07_A FEZ-1 beta-lactamase; m 99.0 6.1E-11 2.1E-15 114.1 2.7 85 6-100 17-101 (263)
53 2xf4_A Hydroxyacylglutathione 99.0 1.2E-10 4.2E-15 107.9 4.4 84 3-101 2-87 (210)
54 1sml_A Protein (penicillinase) 99.0 9.1E-11 3.1E-15 113.3 2.6 77 16-99 37-113 (269)
55 1ztc_A Hypothetical protein TM 99.0 8.6E-11 2.9E-15 109.8 2.0 82 4-95 13-103 (221)
56 2p4z_A Metal-dependent hydrola 99.0 5.1E-10 1.8E-14 108.5 7.4 73 16-97 32-104 (284)
57 3esh_A Protein similar to meta 99.0 1.1E-10 3.8E-15 113.3 2.6 84 16-100 47-141 (280)
58 4ax1_B Metallo-beta-lactamase 99.0 1.7E-10 6E-15 113.5 2.6 80 16-102 57-136 (303)
59 2qed_A Hydroxyacylglutathione 98.9 2.9E-10 1E-14 108.5 3.2 81 2-96 6-87 (258)
60 3iog_A Beta-lactamase; hydrola 98.9 3.9E-10 1.3E-14 105.9 3.7 81 15-104 21-101 (227)
61 1pn0_A Phenol 2-monooxygenase; 98.9 7.7E-10 2.6E-14 120.3 6.1 72 509-593 7-83 (665)
62 2r2d_A AGR_PTI_140P, Zn-depend 98.9 6.7E-10 2.3E-14 107.6 5.0 81 17-102 43-140 (276)
63 2zo4_A Metallo-beta-lactamase 98.9 1.1E-09 3.8E-14 108.4 6.4 82 16-103 21-102 (317)
64 3tp9_A Beta-lactamase and rhod 98.9 5.1E-10 1.7E-14 117.2 3.9 83 1-98 3-87 (474)
65 3rp8_A Flavoprotein monooxygen 98.9 1E-09 3.5E-14 112.8 5.4 73 507-592 20-92 (407)
66 3q6v_A Beta-lactamase; metallo 98.9 9.5E-10 3.3E-14 103.6 4.6 87 8-103 17-103 (233)
67 4dik_A Flavoprotein; TM0755, e 98.9 4.4E-10 1.5E-14 114.0 2.2 81 17-103 52-132 (410)
68 4efz_A Metallo-beta-lactamase 98.9 9.9E-10 3.4E-14 107.5 4.2 91 2-100 5-102 (298)
69 3ihg_A RDME; flavoenzyme, anth 98.9 2.7E-09 9.1E-14 113.8 7.8 72 508-592 3-74 (535)
70 1p9e_A Methyl parathion hydrol 98.8 6E-10 2.1E-14 110.7 2.1 81 17-99 97-178 (331)
71 2qa1_A PGAE, polyketide oxygen 98.8 2.9E-09 9.9E-14 112.0 7.4 67 507-585 8-74 (500)
72 2qa2_A CABE, polyketide oxygen 98.8 2.9E-09 1E-13 111.9 7.4 66 508-585 10-75 (499)
73 1qh5_A Glyoxalase II, protein 98.8 1.3E-09 4.3E-14 104.1 3.8 66 18-95 13-80 (260)
74 3fmw_A Oxygenase; mithramycin, 98.8 3.3E-09 1.1E-13 113.1 6.8 65 509-585 48-112 (570)
75 2vw8_A PA1000, PQSE; quinolone 98.8 1.2E-09 4.1E-14 107.3 3.0 78 16-100 23-102 (303)
76 2gcu_A Putative hydroxyacylglu 98.8 1.3E-09 4.4E-14 103.2 3.0 84 2-96 1-88 (245)
77 3r2u_A Metallo-beta-lactamase 98.8 1.5E-09 5E-14 113.0 3.7 82 1-97 24-107 (466)
78 1xm8_A Glyoxalase II; structur 98.8 1.9E-09 6.5E-14 102.6 3.9 68 18-98 13-82 (254)
79 4hl2_A Beta-lactamase NDM-1; s 98.8 7.1E-10 2.4E-14 105.2 0.9 76 15-100 46-122 (243)
80 4eyb_A Beta-lactamase NDM-1; m 98.8 1E-09 3.5E-14 105.7 1.4 75 16-99 74-148 (270)
81 2bib_A CBPE, teichoic acid pho 98.8 6.9E-09 2.3E-13 110.6 7.2 93 3-99 5-115 (547)
82 3l6n_A Metallo-beta-lactamase; 98.8 2E-09 6.9E-14 100.3 2.7 77 16-101 30-106 (219)
83 3c96_A Flavin-containing monoo 98.8 4.4E-09 1.5E-13 108.2 5.4 66 508-585 2-68 (410)
84 2p18_A Glyoxalase II; metallop 98.8 4.7E-09 1.6E-13 102.9 5.2 84 4-96 29-125 (311)
85 1e5d_A Rubredoxin\:oxygen oxid 98.8 2E-09 6.7E-14 110.5 2.6 79 16-102 34-112 (402)
86 2r0c_A REBC; flavin adenine di 98.7 1E-08 3.5E-13 109.3 7.8 71 508-591 24-94 (549)
87 1m2x_A Class B carbapenemase B 98.7 2.5E-09 8.5E-14 100.0 2.6 75 16-100 26-101 (223)
88 3hnn_A Putative diflavin flavo 98.7 7.1E-10 2.4E-14 106.4 -1.4 77 17-101 43-119 (262)
89 1jjt_A IMP-1 metallo beta-lact 98.7 4.4E-09 1.5E-13 98.6 4.1 75 16-100 32-106 (228)
90 2dkh_A 3-hydroxybenzoate hydro 98.7 9.8E-09 3.4E-13 111.4 6.8 65 509-585 31-96 (639)
91 3alj_A 2-methyl-3-hydroxypyrid 98.7 1.1E-08 3.8E-13 104.0 6.7 71 508-591 9-79 (379)
92 2x3n_A Probable FAD-dependent 98.7 1.1E-08 3.8E-13 104.8 6.2 65 509-585 5-69 (399)
93 1a7t_A Metallo-beta-lactamase; 98.7 5.1E-09 1.7E-13 98.5 3.2 75 17-100 37-111 (232)
94 3kl7_A Putative metal-dependen 98.7 2.8E-08 9.7E-13 93.2 8.2 75 4-100 30-104 (235)
95 4ad9_A Lactb2, beta-lactamase- 98.7 1.1E-08 3.8E-13 99.7 5.6 75 16-95 31-107 (289)
96 1mqo_A Beta-lactamase II; alph 98.7 5.9E-09 2E-13 97.7 3.5 75 16-99 40-114 (227)
97 1k0i_A P-hydroxybenzoate hydro 98.7 7.6E-09 2.6E-13 105.8 4.6 71 510-591 2-72 (394)
98 2y8b_A Metallo-B-lactamase; hy 98.7 8E-09 2.7E-13 99.2 3.8 76 16-101 67-143 (265)
99 2ohh_A Type A flavoprotein FPR 98.6 5.9E-09 2E-13 107.0 2.1 78 17-101 35-115 (404)
100 2vou_A 2,6-dihydroxypyridine h 98.6 3.9E-08 1.3E-12 100.6 8.2 63 508-581 3-65 (397)
101 2e7y_A TRNAse Z; tRNA maturati 98.6 1.5E-08 5E-13 98.3 4.3 72 18-105 13-91 (280)
102 3rpc_A Possible metal-dependen 98.6 5.7E-08 2E-12 93.1 8.2 85 4-97 5-100 (264)
103 1ycg_A Nitric oxide reductase; 98.6 6E-09 2E-13 106.7 1.3 77 17-101 36-112 (398)
104 2fhx_A SPM-1; metallo-beta-lac 98.6 1.5E-08 5E-13 96.3 3.8 80 15-103 28-108 (246)
105 3oz2_A Digeranylgeranylglycero 98.6 2.3E-08 7.8E-13 102.1 5.5 62 507-582 1-62 (397)
106 3nix_A Flavoprotein/dehydrogen 98.6 2.7E-08 9.2E-13 102.6 5.9 65 508-585 3-67 (421)
107 3i3l_A Alkylhalidase CMLS; fla 98.6 4.9E-08 1.7E-12 104.4 6.9 65 508-585 21-85 (591)
108 2q9u_A A-type flavoprotein; fl 98.6 7.5E-09 2.6E-13 106.5 0.3 78 17-102 41-118 (414)
109 4hb9_A Similarities with proba 98.5 9.6E-08 3.3E-12 98.0 6.3 63 511-583 2-64 (412)
110 3h3e_A Uncharacterized protein 98.5 5.6E-08 1.9E-12 92.0 3.8 62 17-97 32-93 (267)
111 2p97_A Hypothetical protein; p 98.5 5.8E-08 2E-12 88.9 3.5 72 14-100 21-92 (201)
112 2xdo_A TETX2 protein; tetracyc 98.5 1.4E-07 4.8E-12 96.5 6.1 68 508-585 24-92 (398)
113 3bv6_A Metal-dependent hydrola 98.4 3.6E-07 1.2E-11 92.3 8.4 89 4-100 62-175 (379)
114 2wyl_A L-ascorbate-6-phosphate 98.4 3.9E-07 1.3E-11 91.5 8.3 92 3-100 37-151 (360)
115 2pyx_A Tryptophan halogenase; 98.4 1.2E-07 4E-12 100.7 4.6 61 509-582 6-78 (526)
116 1ryi_A Glycine oxidase; flavop 98.4 5.4E-06 1.8E-10 84.0 16.6 70 167-240 159-229 (382)
117 3e1t_A Halogenase; flavoprotei 98.4 2.4E-07 8.2E-12 97.9 6.7 65 508-585 5-70 (512)
118 3kkj_A Amine oxidase, flavin-c 98.3 3E-07 1E-11 88.9 4.8 36 509-548 1-36 (336)
119 2e4g_A Tryptophan halogenase; 98.3 4E-07 1.4E-11 97.1 6.1 62 508-582 23-88 (550)
120 2cfu_A SDSA1; SDS-hydrolase, l 98.3 8.1E-08 2.8E-12 103.7 0.4 78 17-99 123-203 (658)
121 3cgv_A Geranylgeranyl reductas 98.3 4.5E-07 1.5E-11 92.5 5.6 62 508-583 2-63 (397)
122 2yhe_A SEC-alkyl sulfatase; hy 97.6 8.6E-08 2.9E-12 102.8 0.0 76 17-97 133-211 (668)
123 2aqj_A Tryptophan halogenase, 98.3 6.7E-07 2.3E-11 95.1 6.4 62 508-582 3-68 (538)
124 2gag_B Heterotetrameric sarcos 98.2 1.1E-05 3.9E-10 82.3 14.7 73 167-242 169-242 (405)
125 2weu_A Tryptophan 5-halogenase 98.2 5.6E-07 1.9E-11 95.2 4.2 60 510-582 2-64 (511)
126 2bry_A NEDD9 interacting prote 98.2 1.4E-06 4.9E-11 91.4 6.0 62 508-582 90-151 (497)
127 3atr_A Conserved archaeal prot 98.1 1.6E-06 5.6E-11 90.1 5.3 62 509-583 5-66 (453)
128 1vjn_A Zn-dependent hydrolase 98.0 5.1E-06 1.8E-10 76.8 6.2 51 16-81 19-69 (220)
129 4fk1_A Putative thioredoxin re 98.0 2.9E-06 9.8E-11 83.1 4.7 38 507-548 3-40 (304)
130 1y56_B Sarcosine oxidase; dehy 98.0 0.00011 3.8E-09 74.3 15.2 70 167-240 144-215 (382)
131 3ihm_A Styrene monooxygenase A 98.0 8.7E-06 3E-10 83.8 7.0 60 509-579 21-83 (430)
132 3fpz_A Thiazole biosynthetic e 97.9 1.4E-05 4.8E-10 79.0 7.5 69 509-580 64-132 (326)
133 4gcm_A TRXR, thioredoxin reduc 97.9 7E-06 2.4E-10 80.6 4.9 38 507-548 3-40 (312)
134 3jsk_A Cypbp37 protein; octame 97.9 1.3E-05 4.5E-10 78.4 6.6 70 509-581 78-147 (344)
135 1c0p_A D-amino acid oxidase; a 97.9 1.6E-05 5.4E-10 80.0 7.1 65 509-577 5-83 (363)
136 3v76_A Flavoprotein; structura 97.9 7.5E-06 2.6E-10 83.6 4.7 41 504-548 21-61 (417)
137 3c4a_A Probable tryptophan hyd 97.9 2.8E-06 9.4E-11 86.2 1.4 61 512-582 2-63 (381)
138 1yvv_A Amine oxidase, flavin-c 97.8 9.9E-06 3.4E-10 80.4 4.8 35 510-548 2-36 (336)
139 2ivd_A PPO, PPOX, protoporphyr 97.8 2.2E-05 7.4E-10 82.2 7.1 74 507-584 13-93 (478)
140 2gf3_A MSOX, monomeric sarcosi 97.8 3.2E-05 1.1E-09 78.5 7.9 68 167-238 145-213 (389)
141 3i6d_A Protoporphyrinogen oxid 97.8 1.6E-05 5.6E-10 82.8 5.4 71 509-583 4-87 (470)
142 2cul_A Glucose-inhibited divis 97.8 1.6E-05 5.3E-10 74.4 4.6 36 508-547 1-36 (232)
143 1rp0_A ARA6, thiazole biosynth 97.8 3E-05 1E-09 74.9 6.8 68 509-580 38-105 (284)
144 3dme_A Conserved exported prot 97.7 1.9E-05 6.5E-10 79.4 4.8 35 509-547 3-37 (369)
145 3nyc_A D-arginine dehydrogenas 97.7 0.00015 5E-09 73.2 11.4 71 166-240 148-219 (381)
146 1ryi_A Glycine oxidase; flavop 97.7 2.2E-05 7.5E-10 79.5 5.2 39 506-548 13-51 (382)
147 2oln_A NIKD protein; flavoprot 97.7 2E-05 6.7E-10 80.3 4.8 35 510-548 4-38 (397)
148 4a5l_A Thioredoxin reductase; 97.7 2E-05 6.7E-10 77.4 4.4 35 510-548 4-38 (314)
149 3da1_A Glycerol-3-phosphate de 97.7 1.9E-05 6.6E-10 84.0 4.4 37 508-548 16-52 (561)
150 2qcu_A Aerobic glycerol-3-phos 97.7 0.00094 3.2E-08 70.0 17.2 68 168-238 145-219 (501)
151 2gqf_A Hypothetical protein HI 97.6 2.8E-05 9.7E-10 79.0 4.6 37 508-548 2-38 (401)
152 3lov_A Protoporphyrinogen oxid 97.6 5E-05 1.7E-09 79.3 6.6 73 508-584 2-83 (475)
153 2i0z_A NAD(FAD)-utilizing dehy 97.6 3E-05 1E-09 80.3 4.8 37 508-548 24-60 (447)
154 4gde_A UDP-galactopyranose mut 97.6 3.2E-05 1.1E-09 81.7 5.1 69 509-580 9-85 (513)
155 2gag_B Heterotetrameric sarcos 97.6 3.3E-05 1.1E-09 78.9 5.0 41 504-548 15-57 (405)
156 4b87_A DNA cross-LINK repair 1 97.6 8.2E-06 2.8E-10 81.4 0.4 59 21-103 31-89 (367)
157 1y56_B Sarcosine oxidase; dehy 97.6 3.6E-05 1.2E-09 77.9 5.2 36 509-548 4-39 (382)
158 2e1m_A L-glutamate oxidase; L- 97.6 8.1E-05 2.8E-09 74.3 7.6 73 507-583 41-131 (376)
159 3p1w_A Rabgdi protein; GDI RAB 97.6 8E-05 2.7E-09 76.6 7.7 39 506-548 16-54 (475)
160 2uzz_A N-methyl-L-tryptophan o 97.6 2.6E-05 9E-10 78.6 4.0 36 510-549 2-37 (372)
161 3dje_A Fructosyl amine: oxygen 97.6 3.5E-05 1.2E-09 79.6 5.0 37 509-549 5-42 (438)
162 1sez_A Protoporphyrinogen oxid 97.6 7.4E-05 2.5E-09 78.7 7.5 71 509-583 12-89 (504)
163 2gf3_A MSOX, monomeric sarcosi 97.6 3.8E-05 1.3E-09 77.8 5.0 36 510-549 3-38 (389)
164 2gmh_A Electron transfer flavo 97.6 4.4E-05 1.5E-09 81.7 5.6 59 509-574 34-94 (584)
165 2yg5_A Putrescine oxidase; oxi 97.6 6.2E-05 2.1E-09 78.1 6.6 70 508-581 3-79 (453)
166 3zdk_A 5' exonuclease apollo; 97.6 1.6E-05 5.3E-10 78.3 1.8 42 59-105 23-64 (336)
167 2gjc_A Thiazole biosynthetic e 97.6 7.6E-05 2.6E-09 72.6 6.5 70 509-581 64-133 (326)
168 2vvm_A Monoamine oxidase N; FA 97.6 7.2E-05 2.5E-09 78.6 6.9 70 511-584 40-116 (495)
169 3qj4_A Renalase; FAD/NAD(P)-bi 97.6 4.7E-05 1.6E-09 75.7 5.1 34 511-548 2-38 (342)
170 2ywl_A Thioredoxin reductase r 97.6 0.00018 6E-09 64.1 8.2 67 169-240 53-119 (180)
171 2qcu_A Aerobic glycerol-3-phos 97.6 4.7E-05 1.6E-09 80.0 4.8 36 509-548 2-37 (501)
172 2oln_A NIKD protein; flavoprot 97.5 0.0011 3.8E-08 67.2 14.6 70 167-240 148-218 (397)
173 1qo8_A Flavocytochrome C3 fuma 97.5 5.4E-05 1.8E-09 80.8 4.9 39 507-549 118-156 (566)
174 3g3e_A D-amino-acid oxidase; F 97.5 7.6E-05 2.6E-09 74.5 5.6 63 511-577 1-78 (351)
175 3nks_A Protoporphyrinogen oxid 97.5 0.00011 3.7E-09 76.8 6.8 70 511-584 3-85 (477)
176 2bcg_G Secretory pathway GDP d 97.5 7.1E-05 2.4E-09 77.5 5.3 36 509-548 10-45 (453)
177 2rgh_A Alpha-glycerophosphate 97.5 3.4E-05 1.2E-09 82.3 2.8 35 510-548 32-66 (571)
178 2zbw_A Thioredoxin reductase; 97.5 7.1E-05 2.4E-09 74.1 4.9 37 508-548 3-39 (335)
179 3nyc_A D-arginine dehydrogenas 97.5 5.4E-05 1.9E-09 76.4 4.2 35 508-547 7-41 (381)
180 2ywl_A Thioredoxin reductase r 97.5 7.6E-05 2.6E-09 66.5 4.6 33 511-547 2-34 (180)
181 4a9w_A Monooxygenase; baeyer-v 97.5 7.1E-05 2.4E-09 74.7 4.9 37 508-548 1-37 (357)
182 3k7m_X 6-hydroxy-L-nicotine ox 97.5 6.4E-05 2.2E-09 77.4 4.6 33 511-547 2-34 (431)
183 3urh_A Dihydrolipoyl dehydroge 97.5 6.4E-05 2.2E-09 78.8 4.6 40 504-547 19-58 (491)
184 2jae_A L-amino acid oxidase; o 97.5 0.00012 4E-09 76.8 6.5 37 508-548 9-45 (489)
185 4at0_A 3-ketosteroid-delta4-5a 97.5 7.4E-05 2.5E-09 78.7 4.9 37 508-548 39-75 (510)
186 3ps9_A TRNA 5-methylaminomethy 97.5 0.00079 2.7E-08 73.5 13.1 64 166-232 411-474 (676)
187 3nlc_A Uncharacterized protein 97.4 6.8E-05 2.3E-09 78.9 4.3 36 509-548 106-141 (549)
188 3ps9_A TRNA 5-methylaminomethy 97.4 0.00011 3.8E-09 80.2 5.8 35 509-547 271-305 (676)
189 3hdq_A UDP-galactopyranose mut 97.4 0.00011 3.9E-09 73.9 5.2 73 507-583 26-107 (397)
190 3ka7_A Oxidoreductase; structu 97.4 9.3E-05 3.2E-09 76.0 4.7 34 511-548 1-34 (425)
191 3ab1_A Ferredoxin--NADP reduct 97.4 0.0001 3.4E-09 73.9 4.8 36 509-548 13-48 (360)
192 3d1c_A Flavin-containing putat 97.4 0.00011 3.7E-09 73.9 5.1 36 508-547 2-38 (369)
193 3itj_A Thioredoxin reductase 1 97.4 8.7E-05 3E-09 73.5 4.3 36 508-547 20-55 (338)
194 3axb_A Putative oxidoreductase 97.4 6.3E-05 2.1E-09 77.9 3.3 36 508-547 21-58 (448)
195 3pvc_A TRNA 5-methylaminomethy 97.4 0.00011 3.8E-09 80.3 5.4 35 509-547 263-297 (689)
196 3fbs_A Oxidoreductase; structu 97.4 0.00011 3.8E-09 71.2 4.8 35 510-548 2-36 (297)
197 3cty_A Thioredoxin reductase; 97.4 0.00012 4E-09 72.0 4.9 35 509-547 15-49 (319)
198 1rsg_A FMS1 protein; FAD bindi 97.4 0.0001 3.5E-09 77.8 4.8 37 508-548 6-43 (516)
199 1y0p_A Fumarate reductase flav 97.4 0.00013 4.3E-09 78.1 5.3 37 508-548 124-160 (571)
200 3pvc_A TRNA 5-methylaminomethy 97.4 0.0014 4.7E-08 71.7 13.6 64 166-232 406-470 (689)
201 4dgk_A Phytoene dehydrogenase; 97.4 9.2E-05 3.2E-09 77.9 4.0 33 512-548 3-35 (501)
202 3o0h_A Glutathione reductase; 97.4 0.00012 4.1E-09 76.5 4.9 35 509-547 25-59 (484)
203 2q7v_A Thioredoxin reductase; 97.3 0.00015 5.1E-09 71.4 5.2 36 508-547 6-41 (325)
204 3nrn_A Uncharacterized protein 97.3 0.00013 4.5E-09 74.8 4.8 33 512-548 2-34 (421)
205 2bs2_A Quinol-fumarate reducta 97.3 0.00014 4.7E-09 78.6 5.0 37 508-548 3-39 (660)
206 3ces_A MNMG, tRNA uridine 5-ca 97.3 0.00013 4.4E-09 77.5 4.7 35 509-547 27-61 (651)
207 3f8d_A Thioredoxin reductase ( 97.3 0.00017 5.8E-09 70.8 5.2 34 509-546 14-47 (323)
208 2i0z_A NAD(FAD)-utilizing dehy 97.3 0.00059 2E-08 70.4 9.5 68 171-241 133-212 (447)
209 2wdq_A Succinate dehydrogenase 97.3 0.00014 4.7E-09 77.8 4.8 37 509-549 6-42 (588)
210 1d5t_A Guanine nucleotide diss 97.3 0.00027 9.1E-09 72.7 6.7 36 509-548 5-40 (433)
211 4dna_A Probable glutathione re 97.3 0.00015 5.2E-09 75.3 4.8 35 509-547 4-38 (463)
212 2zxi_A TRNA uridine 5-carboxym 97.3 0.00015 5E-09 76.8 4.7 35 509-547 26-60 (637)
213 1v59_A Dihydrolipoamide dehydr 97.3 0.00012 4.3E-09 76.3 4.1 35 509-547 4-38 (478)
214 3lzw_A Ferredoxin--NADP reduct 97.3 0.00017 5.7E-09 71.2 4.8 36 509-548 6-41 (332)
215 3cp8_A TRNA uridine 5-carboxym 97.3 0.00015 5.2E-09 77.0 4.6 36 508-547 19-54 (641)
216 3ic9_A Dihydrolipoamide dehydr 97.3 0.00014 4.9E-09 76.1 4.4 35 509-547 7-41 (492)
217 1trb_A Thioredoxin reductase; 97.3 0.00015 5E-09 71.3 4.3 35 508-546 3-37 (320)
218 3lad_A Dihydrolipoamide dehydr 97.3 0.00013 4.5E-09 76.1 4.0 35 509-547 2-36 (476)
219 2a8x_A Dihydrolipoyl dehydroge 97.3 0.00018 6.1E-09 74.8 4.9 35 509-547 2-36 (464)
220 1vdc_A NTR, NADPH dependent th 97.3 0.00012 4.1E-09 72.4 3.4 34 508-545 6-39 (333)
221 1kf6_A Fumarate reductase flav 97.2 0.00012 4.1E-09 78.4 3.5 36 509-548 4-41 (602)
222 3c4n_A Uncharacterized protein 97.2 0.00055 1.9E-08 69.7 8.2 71 167-241 167-248 (405)
223 2gv8_A Monooxygenase; FMO, FAD 97.2 0.00024 8.2E-09 73.5 5.5 35 509-547 5-41 (447)
224 3t37_A Probable dehydrogenase; 97.2 0.00018 6.2E-09 76.1 4.7 37 509-548 16-52 (526)
225 2h88_A Succinate dehydrogenase 97.2 0.00019 6.5E-09 76.9 4.8 36 509-548 17-52 (621)
226 2b9w_A Putative aminooxidase; 97.2 0.0002 6.9E-09 73.5 4.8 68 509-580 5-80 (424)
227 1s3e_A Amine oxidase [flavin-c 97.2 0.00019 6.6E-09 75.8 4.8 69 509-581 3-79 (520)
228 3v76_A Flavoprotein; structura 97.2 0.00057 1.9E-08 69.6 8.0 68 169-240 129-207 (417)
229 3l8k_A Dihydrolipoyl dehydroge 97.2 0.00022 7.5E-09 74.1 5.0 35 509-547 3-37 (466)
230 3c4n_A Uncharacterized protein 97.2 0.00019 6.5E-09 73.1 4.4 39 508-548 34-72 (405)
231 2iid_A L-amino-acid oxidase; f 97.2 0.00036 1.2E-08 73.2 6.7 36 509-548 32-67 (498)
232 1i8t_A UDP-galactopyranose mut 97.2 0.00024 8.2E-09 71.2 4.7 69 511-583 2-78 (367)
233 3g5s_A Methylenetetrahydrofola 97.2 0.00027 9.2E-09 69.7 4.8 34 511-548 2-35 (443)
234 2bi7_A UDP-galactopyranose mut 97.2 0.00028 9.5E-09 71.2 5.0 71 509-583 2-82 (384)
235 2q0l_A TRXR, thioredoxin reduc 97.2 0.00025 8.5E-09 69.3 4.6 33 511-547 2-35 (311)
236 3qfa_A Thioredoxin reductase 1 97.1 0.00031 1.1E-08 74.0 5.3 36 508-547 30-65 (519)
237 3dk9_A Grase, GR, glutathione 97.1 0.00025 8.6E-09 74.0 4.5 36 508-547 18-53 (478)
238 1fl2_A Alkyl hydroperoxide red 97.1 0.00032 1.1E-08 68.5 4.9 34 510-547 1-34 (310)
239 1jnr_A Adenylylsulfate reducta 97.1 0.00033 1.1E-08 75.8 5.1 36 509-548 21-60 (643)
240 2a87_A TRXR, TR, thioredoxin r 97.1 0.00025 8.6E-09 70.2 3.9 35 508-546 12-46 (335)
241 3qvp_A Glucose oxidase; oxidor 97.1 0.00038 1.3E-08 73.8 5.5 38 507-547 16-53 (583)
242 3pl8_A Pyranose 2-oxidase; sub 97.1 0.00033 1.1E-08 75.3 5.0 37 509-549 45-81 (623)
243 2hqm_A GR, grase, glutathione 97.1 0.00033 1.1E-08 73.1 4.8 36 508-547 9-44 (479)
244 1kdg_A CDH, cellobiose dehydro 97.1 0.00033 1.1E-08 74.4 4.9 36 509-548 6-41 (546)
245 3q9t_A Choline dehydrogenase a 97.1 0.00042 1.5E-08 73.5 5.5 37 508-548 4-41 (577)
246 3s5w_A L-ornithine 5-monooxyge 97.1 0.00024 8.2E-09 73.9 3.5 36 509-548 29-69 (463)
247 1w4x_A Phenylacetone monooxyge 97.1 0.0004 1.4E-08 73.6 5.3 37 508-548 14-50 (542)
248 3gwf_A Cyclohexanone monooxyge 97.1 0.00038 1.3E-08 73.5 5.1 36 508-547 6-42 (540)
249 1ojt_A Surface protein; redox- 97.1 0.00036 1.2E-08 72.9 4.7 35 509-547 5-39 (482)
250 1pj5_A N,N-dimethylglycine oxi 97.1 0.00034 1.2E-08 78.3 4.8 36 509-548 3-39 (830)
251 1mo9_A ORF3; nucleotide bindin 97.1 0.00043 1.5E-08 73.0 5.3 37 507-547 40-76 (523)
252 1dxl_A Dihydrolipoamide dehydr 97.1 0.00031 1E-08 73.2 4.1 36 508-547 4-39 (470)
253 2qae_A Lipoamide, dihydrolipoy 97.0 0.00039 1.3E-08 72.4 4.7 34 510-547 2-35 (468)
254 1zmd_A Dihydrolipoyl dehydroge 97.0 0.0004 1.4E-08 72.3 4.8 36 508-547 4-39 (474)
255 2e5v_A L-aspartate oxidase; ar 97.0 0.0004 1.4E-08 72.2 4.6 31 512-546 1-31 (472)
256 3dgz_A Thioredoxin reductase 2 97.0 0.00043 1.5E-08 72.4 4.9 36 508-547 4-39 (488)
257 2eq6_A Pyruvate dehydrogenase 97.0 0.00045 1.5E-08 71.8 4.9 36 508-547 4-39 (464)
258 1chu_A Protein (L-aspartate ox 97.0 0.0005 1.7E-08 72.7 5.2 36 508-548 6-41 (540)
259 1ges_A Glutathione reductase; 97.0 0.00049 1.7E-08 71.1 5.1 35 509-547 3-37 (450)
260 3dme_A Conserved exported prot 97.0 0.0016 5.6E-08 65.0 8.8 72 167-240 145-220 (369)
261 4dgk_A Phytoene dehydrogenase; 97.0 0.0031 1.1E-07 66.1 11.3 65 172-238 221-285 (501)
262 2cul_A Glucose-inhibited divis 97.0 0.00079 2.7E-08 62.6 6.0 66 170-239 66-133 (232)
263 2r9z_A Glutathione amide reduc 97.0 0.00047 1.6E-08 71.5 4.9 35 509-547 3-37 (463)
264 3nlc_A Uncharacterized protein 97.0 0.0015 5.2E-08 68.6 8.7 69 170-240 218-290 (549)
265 1onf_A GR, grase, glutathione 97.0 0.00045 1.5E-08 72.4 4.7 34 510-547 2-35 (500)
266 3axb_A Putative oxidoreductase 97.0 0.006 2.1E-07 62.8 13.2 73 167-240 176-264 (448)
267 3r9u_A Thioredoxin reductase; 97.0 0.00035 1.2E-08 68.3 3.6 34 509-546 3-37 (315)
268 2yqu_A 2-oxoglutarate dehydrog 97.0 0.00047 1.6E-08 71.4 4.6 34 510-547 1-34 (455)
269 3uox_A Otemo; baeyer-villiger 97.0 0.00054 1.8E-08 72.4 5.1 36 508-547 7-42 (545)
270 1zk7_A HGII, reductase, mercur 97.0 0.00054 1.9E-08 71.2 5.0 35 509-547 3-37 (467)
271 3da1_A Glycerol-3-phosphate de 97.0 0.0034 1.2E-07 66.6 11.2 70 168-240 166-242 (561)
272 3dgh_A TRXR-1, thioredoxin red 96.9 0.0005 1.7E-08 71.8 4.6 35 508-546 7-41 (483)
273 1v0j_A UDP-galactopyranose mut 96.9 0.00048 1.6E-08 69.9 4.4 71 510-583 7-87 (399)
274 4dsg_A UDP-galactopyranose mut 96.9 0.00052 1.8E-08 71.6 4.7 37 508-548 7-44 (484)
275 4ap3_A Steroid monooxygenase; 96.9 0.00057 1.9E-08 72.3 4.9 36 508-547 19-54 (549)
276 1ebd_A E3BD, dihydrolipoamide 96.9 0.00059 2E-08 70.7 4.8 35 509-547 2-36 (455)
277 1lvl_A Dihydrolipoamide dehydr 96.8 0.00069 2.4E-08 70.2 4.6 36 508-547 3-38 (458)
278 1fec_A Trypanothione reductase 96.8 0.00059 2E-08 71.3 4.1 33 509-545 2-35 (490)
279 2vdc_G Glutamate synthase [NAD 96.8 0.00075 2.6E-08 69.6 4.6 37 508-548 120-156 (456)
280 3fim_B ARYL-alcohol oxidase; A 96.8 0.00051 1.8E-08 72.7 3.4 37 510-549 2-38 (566)
281 1hyu_A AHPF, alkyl hydroperoxi 96.8 0.00082 2.8E-08 70.8 4.8 36 508-547 210-245 (521)
282 4b1b_A TRXR, thioredoxin reduc 96.8 0.00095 3.2E-08 70.2 5.2 35 509-547 41-75 (542)
283 3gyx_A Adenylylsulfate reducta 96.8 0.0007 2.4E-08 73.0 4.3 40 509-548 21-62 (662)
284 2xve_A Flavin-containing monoo 96.8 0.0008 2.7E-08 69.8 4.6 34 511-548 3-42 (464)
285 1d4d_A Flavocytochrome C fumar 96.8 0.0011 3.8E-08 70.6 5.6 36 509-548 125-160 (572)
286 3k30_A Histamine dehydrogenase 96.7 0.00089 3E-08 73.2 4.7 36 508-547 389-424 (690)
287 3i6d_A Protoporphyrinogen oxid 96.7 0.0094 3.2E-07 61.7 12.4 57 173-234 236-292 (470)
288 1ju2_A HydroxynitrIle lyase; f 96.7 0.00091 3.1E-08 70.6 4.5 35 509-548 25-59 (536)
289 3lxd_A FAD-dependent pyridine 96.7 0.0011 3.7E-08 67.8 4.9 37 508-548 7-45 (415)
290 1q1r_A Putidaredoxin reductase 96.7 0.0012 3.9E-08 67.9 5.2 36 509-548 3-40 (431)
291 3h28_A Sulfide-quinone reducta 96.7 0.0011 3.9E-08 67.9 4.8 34 511-548 3-38 (430)
292 1gpe_A Protein (glucose oxidas 96.7 0.0013 4.6E-08 70.1 5.4 39 507-549 21-60 (587)
293 2wpf_A Trypanothione reductase 96.7 0.00096 3.3E-08 69.8 4.2 33 509-545 6-39 (495)
294 3dje_A Fructosyl amine: oxygen 96.7 0.0029 1E-07 65.0 7.6 63 167-232 156-222 (438)
295 2v3a_A Rubredoxin reductase; a 96.6 0.0014 4.9E-08 66.1 5.1 34 510-547 4-39 (384)
296 3nrn_A Uncharacterized protein 96.6 0.021 7.2E-07 58.1 13.9 61 172-238 189-249 (421)
297 3qj4_A Renalase; FAD/NAD(P)-bi 96.6 0.049 1.7E-06 53.6 16.1 41 186-229 123-163 (342)
298 2bc0_A NADH oxidase; flavoprot 96.6 0.001 3.6E-08 69.5 4.0 36 509-548 34-72 (490)
299 3h8l_A NADH oxidase; membrane 96.6 0.0011 3.9E-08 67.4 4.0 33 512-548 3-38 (409)
300 4gut_A Lysine-specific histone 96.6 0.001 3.6E-08 73.0 3.9 36 509-548 335-370 (776)
301 1xhc_A NADH oxidase /nitrite r 96.6 0.0016 5.5E-08 65.2 4.8 33 511-548 9-41 (367)
302 1b37_A Protein (polyamine oxid 96.6 0.0014 4.9E-08 68.1 4.6 36 509-548 3-39 (472)
303 2x8g_A Thioredoxin glutathione 96.6 0.0014 4.9E-08 70.4 4.7 35 508-546 105-139 (598)
304 3kd9_A Coenzyme A disulfide re 96.5 0.0015 5.1E-08 67.5 4.5 38 509-548 2-39 (449)
305 1xdi_A RV3303C-LPDA; reductase 96.5 0.0014 4.6E-08 68.8 4.2 37 510-547 2-38 (499)
306 2gqf_A Hypothetical protein HI 96.5 0.005 1.7E-07 62.4 8.2 61 170-231 107-168 (401)
307 3iwa_A FAD-dependent pyridine 96.5 0.0013 4.5E-08 68.4 4.0 37 510-548 3-39 (472)
308 1n4w_A CHOD, cholesterol oxida 96.5 0.0017 5.8E-08 68.0 4.8 36 509-548 4-39 (504)
309 1o94_A Tmadh, trimethylamine d 96.5 0.0019 6.5E-08 70.9 5.4 37 508-548 387-423 (729)
310 1coy_A Cholesterol oxidase; ox 96.5 0.0022 7.5E-08 67.2 5.3 37 508-548 9-45 (507)
311 3ab1_A Ferredoxin--NADP reduct 96.4 0.0055 1.9E-07 61.0 7.9 68 169-238 71-138 (360)
312 1ps9_A 2,4-dienoyl-COA reducta 96.4 0.0024 8.1E-08 69.5 5.5 37 508-548 371-407 (671)
313 2jbv_A Choline oxidase; alcoho 96.4 0.0028 9.4E-08 67.1 5.7 39 508-549 11-49 (546)
314 3fg2_P Putative rubredoxin red 96.4 0.0021 7.3E-08 65.3 4.7 34 511-548 2-37 (404)
315 1rp0_A ARA6, thiazole biosynth 96.4 0.0072 2.5E-07 58.0 8.1 65 170-237 117-197 (284)
316 2uzz_A N-methyl-L-tryptophan o 96.4 0.0071 2.4E-07 60.5 8.1 62 167-232 144-205 (372)
317 2gqw_A Ferredoxin reductase; f 96.3 0.0021 7.1E-08 65.4 4.0 36 509-548 6-43 (408)
318 2gag_A Heterotetrameric sarcos 96.3 0.0024 8.2E-08 72.3 4.8 36 509-548 127-162 (965)
319 3oc4_A Oxidoreductase, pyridin 96.3 0.0024 8.1E-08 66.0 4.4 36 511-548 3-38 (452)
320 1b37_A Protein (polyamine oxid 96.3 0.08 2.7E-06 54.8 16.0 56 173-231 207-270 (472)
321 2z3y_A Lysine-specific histone 96.3 0.003 1E-07 68.6 5.3 37 508-548 105-141 (662)
322 3sx6_A Sulfide-quinone reducta 96.3 0.002 6.8E-08 66.2 3.7 34 511-548 5-41 (437)
323 3ka7_A Oxidoreductase; structu 96.2 0.094 3.2E-06 53.3 16.0 61 172-237 196-257 (425)
324 1y56_A Hypothetical protein PH 96.2 0.0021 7.1E-08 67.2 3.3 36 508-548 106-141 (493)
325 3ef6_A Toluene 1,2-dioxygenase 96.2 0.0031 1.1E-07 64.2 4.5 34 511-548 3-38 (410)
326 2cdu_A NADPH oxidase; flavoenz 96.2 0.0029 9.8E-08 65.4 4.3 36 511-548 1-36 (452)
327 3cgb_A Pyridine nucleotide-dis 96.2 0.0034 1.2E-07 65.3 4.8 36 511-548 37-72 (480)
328 2xag_A Lysine-specific histone 96.2 0.0039 1.3E-07 69.0 5.4 36 509-548 277-312 (852)
329 3klj_A NAD(FAD)-dependent dehy 96.2 0.004 1.4E-07 62.7 5.0 37 508-548 7-43 (385)
330 1m6i_A Programmed cell death p 96.2 0.0036 1.2E-07 65.4 4.8 39 508-548 9-47 (493)
331 1cjc_A Protein (adrenodoxin re 96.1 0.0031 1.1E-07 65.1 4.2 35 510-548 6-42 (460)
332 3ics_A Coenzyme A-disulfide re 96.1 0.0036 1.2E-07 67.0 4.6 39 508-548 34-72 (588)
333 3gwf_A Cyclohexanone monooxyge 96.1 0.012 4.2E-07 61.9 8.5 66 168-234 83-150 (540)
334 2zbw_A Thioredoxin reductase; 96.0 0.014 4.9E-07 57.3 7.9 67 169-238 62-128 (335)
335 1lqt_A FPRA; NADP+ derivative, 96.0 0.0052 1.8E-07 63.4 4.8 40 509-548 2-44 (456)
336 3ces_A MNMG, tRNA uridine 5-ca 95.9 0.012 4.1E-07 62.6 7.4 68 167-238 119-188 (651)
337 4a9w_A Monooxygenase; baeyer-v 95.9 0.011 3.7E-07 58.5 6.9 61 168-232 72-133 (357)
338 3kkj_A Amine oxidase, flavin-c 95.9 0.57 1.9E-05 43.7 18.9 37 376-418 293-329 (336)
339 1vg0_A RAB proteins geranylger 95.9 0.0072 2.5E-07 64.2 5.4 37 509-549 7-43 (650)
340 1gte_A Dihydropyrimidine dehyd 95.9 0.0052 1.8E-07 70.1 4.7 35 509-547 186-221 (1025)
341 3ayj_A Pro-enzyme of L-phenyla 95.8 0.005 1.7E-07 66.3 4.1 34 510-547 56-97 (721)
342 2gv8_A Monooxygenase; FMO, FAD 95.8 0.011 3.9E-07 60.7 6.7 65 167-234 110-180 (447)
343 1nhp_A NADH peroxidase; oxidor 95.8 0.0064 2.2E-07 62.6 4.7 36 511-548 1-36 (447)
344 1qo8_A Flavocytochrome C3 fuma 95.8 0.012 4.1E-07 62.6 6.8 67 169-237 247-318 (566)
345 4g6h_A Rotenone-insensitive NA 95.7 0.0071 2.4E-07 63.1 4.8 38 507-548 39-76 (502)
346 3nks_A Protoporphyrinogen oxid 95.7 0.23 7.9E-06 51.2 16.1 56 173-232 235-291 (477)
347 1s3e_A Amine oxidase [flavin-c 95.5 0.74 2.5E-05 48.0 19.6 53 174-232 217-269 (520)
348 1w4x_A Phenylacetone monooxyge 95.5 0.024 8.2E-07 59.9 8.0 66 168-234 90-157 (542)
349 3ntd_A FAD-dependent pyridine 95.5 0.0081 2.8E-07 63.9 4.3 35 512-548 3-37 (565)
350 1fl2_A Alkyl hydroperoxide red 95.5 0.03 1E-06 54.2 8.1 65 169-233 53-117 (310)
351 2q0l_A TRXR, thioredoxin reduc 95.5 0.02 6.8E-07 55.5 6.7 63 168-234 55-117 (311)
352 4eqs_A Coenzyme A disulfide re 95.5 0.0068 2.3E-07 62.2 3.4 34 511-548 1-36 (437)
353 2v3a_A Rubredoxin reductase; a 95.4 0.023 7.8E-07 57.1 7.1 59 172-233 187-245 (384)
354 3vrd_B FCCB subunit, flavocyto 95.4 0.0094 3.2E-07 60.4 4.2 35 512-548 4-38 (401)
355 1vdc_A NTR, NADPH dependent th 95.4 0.02 6.7E-07 56.2 6.2 61 168-233 66-126 (333)
356 4b63_A L-ornithine N5 monooxyg 95.3 0.0036 1.2E-07 65.4 0.7 42 507-548 36-87 (501)
357 3jsk_A Cypbp37 protein; octame 95.3 0.017 5.8E-07 56.4 5.3 68 170-237 158-257 (344)
358 2zxi_A TRNA uridine 5-carboxym 95.3 0.032 1.1E-06 59.1 7.7 67 167-237 118-186 (637)
359 3hyw_A Sulfide-quinone reducta 95.2 0.011 3.8E-07 60.4 4.1 35 512-548 4-38 (430)
360 4ap3_A Steroid monooxygenase; 95.2 0.03 1E-06 59.0 7.4 65 168-233 95-161 (549)
361 3cp8_A TRNA uridine 5-carboxym 95.2 0.038 1.3E-06 58.7 8.1 67 166-236 111-179 (641)
362 1y0p_A Fumarate reductase flav 95.0 0.035 1.2E-06 59.0 7.3 65 170-236 253-322 (571)
363 4gut_A Lysine-specific histone 95.0 0.56 1.9E-05 51.4 16.9 42 185-229 542-583 (776)
364 2yqu_A 2-oxoglutarate dehydrog 94.9 0.026 8.9E-07 58.2 5.9 59 172-233 208-266 (455)
365 2rgh_A Alpha-glycerophosphate 94.9 0.17 5.8E-06 53.6 12.3 69 169-239 185-259 (571)
366 3uox_A Otemo; baeyer-villiger 94.8 0.034 1.2E-06 58.6 6.3 66 168-234 83-150 (545)
367 3lov_A Protoporphyrinogen oxid 94.7 0.2 6.7E-06 51.8 11.8 53 174-232 238-290 (475)
368 2ivd_A PPO, PPOX, protoporphyr 94.6 0.16 5.6E-06 52.4 11.0 53 174-232 240-295 (478)
369 1ges_A Glutathione reductase; 94.5 0.049 1.7E-06 56.0 6.6 59 173-233 209-267 (450)
370 1pj5_A N,N-dimethylglycine oxi 94.4 0.05 1.7E-06 60.7 6.8 69 167-239 146-216 (830)
371 1hyu_A AHPF, alkyl hydroperoxi 94.3 0.083 2.8E-06 55.4 8.0 64 169-232 264-327 (521)
372 3o0h_A Glutathione reductase; 94.3 0.055 1.9E-06 56.2 6.4 59 172-233 232-290 (484)
373 1d4d_A Flavocytochrome C fumar 94.2 0.065 2.2E-06 56.9 7.0 66 170-237 253-323 (572)
374 2jae_A L-amino acid oxidase; o 94.2 1.4 4.9E-05 45.4 17.2 52 174-230 241-295 (489)
375 3fwz_A Inner membrane protein 94.0 0.051 1.7E-06 45.6 4.6 35 510-548 7-41 (140)
376 3lzw_A Ferredoxin--NADP reduct 94.0 0.11 3.8E-06 50.5 7.9 64 169-235 64-127 (332)
377 2r9z_A Glutathione amide reduc 93.9 0.072 2.5E-06 54.9 6.5 58 173-233 208-266 (463)
378 2xve_A Flavin-containing monoo 93.9 0.071 2.4E-06 55.0 6.4 66 168-234 97-169 (464)
379 2q7v_A Thioredoxin reductase; 93.8 0.098 3.3E-06 50.9 7.0 63 168-232 61-124 (325)
380 3klj_A NAD(FAD)-dependent dehy 93.8 0.071 2.4E-06 53.5 5.9 33 512-548 148-180 (385)
381 2yg5_A Putrescine oxidase; oxi 93.8 1.6 5.4E-05 44.5 16.3 55 174-236 217-272 (453)
382 1c0p_A D-amino acid oxidase; a 93.7 0.47 1.6E-05 46.9 11.9 51 166-232 136-186 (363)
383 2eq6_A Pyruvate dehydrogenase 93.7 0.079 2.7E-06 54.7 6.2 60 172-234 210-274 (464)
384 1nhp_A NADH peroxidase; oxidor 93.6 0.086 2.9E-06 54.1 6.3 57 511-579 150-206 (447)
385 2a87_A TRXR, TR, thioredoxin r 93.5 0.12 4.2E-06 50.5 7.1 60 168-232 67-127 (335)
386 3iwa_A FAD-dependent pyridine 93.5 0.11 3.9E-06 53.6 7.1 58 172-232 202-259 (472)
387 1xdi_A RV3303C-LPDA; reductase 93.5 0.11 3.7E-06 54.2 6.9 58 173-233 224-281 (499)
388 2g1u_A Hypothetical protein TM 93.5 0.067 2.3E-06 45.8 4.4 35 510-548 19-53 (155)
389 1kf6_A Fumarate reductase flav 93.4 0.11 3.9E-06 55.3 7.0 64 172-237 134-203 (602)
390 1fec_A Trypanothione reductase 93.4 0.13 4.3E-06 53.5 7.2 59 172-232 231-289 (490)
391 2wpf_A Trypanothione reductase 93.3 0.14 4.6E-06 53.4 7.3 59 173-233 236-294 (495)
392 1lss_A TRK system potassium up 93.3 0.066 2.2E-06 44.6 4.1 33 511-547 5-37 (140)
393 1trb_A Thioredoxin reductase; 93.2 0.14 4.8E-06 49.6 6.9 60 168-232 58-117 (320)
394 3d1c_A Flavin-containing putat 93.2 0.18 6.2E-06 49.9 7.9 60 169-232 85-144 (369)
395 3ef6_A Toluene 1,2-dioxygenase 93.1 0.12 4.2E-06 52.2 6.5 66 172-240 185-252 (410)
396 1m6i_A Programmed cell death p 93.1 0.14 4.7E-06 53.3 7.0 58 172-232 226-283 (493)
397 1id1_A Putative potassium chan 93.1 0.097 3.3E-06 44.6 4.9 34 510-547 3-36 (153)
398 3lxd_A FAD-dependent pyridine 93.0 0.17 5.9E-06 51.2 7.5 59 172-233 194-253 (415)
399 4gcm_A TRXR, thioredoxin reduc 93.0 0.084 2.9E-06 51.1 5.0 33 512-548 147-179 (312)
400 3fg2_P Putative rubredoxin red 93.0 0.13 4.5E-06 51.8 6.5 66 172-240 184-252 (404)
401 1mo9_A ORF3; nucleotide bindin 92.9 0.13 4.3E-06 54.0 6.5 60 172-234 255-319 (523)
402 2vvm_A Monoamine oxidase N; FA 92.9 0.2 7E-06 52.0 8.0 58 172-232 255-313 (495)
403 1lvl_A Dihydrolipoamide dehydr 92.9 0.11 3.9E-06 53.4 5.9 56 511-579 172-227 (458)
404 3cty_A Thioredoxin reductase; 92.8 0.15 5E-06 49.5 6.3 60 168-232 68-127 (319)
405 1xhc_A NADH oxidase /nitrite r 92.8 0.12 4E-06 51.5 5.7 54 512-579 145-198 (367)
406 2gqw_A Ferredoxin reductase; f 92.6 0.18 6.3E-06 50.9 6.9 56 512-579 147-202 (408)
407 3llv_A Exopolyphosphatase-rela 92.6 0.091 3.1E-06 44.0 3.9 33 512-548 8-40 (141)
408 2gjc_A Thiazole biosynthetic e 92.6 0.21 7.1E-06 48.4 6.9 69 170-238 144-246 (326)
409 1onf_A GR, grase, glutathione 92.6 0.27 9.3E-06 51.1 8.3 60 172-233 217-277 (500)
410 4eqs_A Coenzyme A disulfide re 92.4 0.19 6.3E-06 51.4 6.8 56 512-580 149-204 (437)
411 3itj_A Thioredoxin reductase 1 92.3 0.22 7.7E-06 48.4 7.1 62 168-233 80-144 (338)
412 3p1w_A Rabgdi protein; GDI RAB 92.3 0.22 7.6E-06 51.0 7.1 58 172-230 256-313 (475)
413 2hqm_A GR, grase, glutathione 92.3 0.16 5.5E-06 52.6 6.2 59 172-233 226-287 (479)
414 3fbs_A Oxidoreductase; structu 92.1 0.26 8.8E-06 47.0 7.0 63 168-234 52-115 (297)
415 2z3y_A Lysine-specific histone 92.0 5.3 0.00018 42.9 17.9 48 178-229 403-456 (662)
416 3f8d_A Thioredoxin reductase ( 91.9 0.38 1.3E-05 46.4 8.1 60 169-232 67-126 (323)
417 2qae_A Lipoamide, dihydrolipoy 91.8 0.23 7.8E-06 51.2 6.6 59 172-233 215-278 (468)
418 1q1r_A Putidaredoxin reductase 91.6 0.24 8.1E-06 50.5 6.4 60 172-232 191-251 (431)
419 2bc0_A NADH oxidase; flavoprot 91.4 0.26 8.8E-06 51.2 6.6 56 512-579 196-251 (490)
420 3cgb_A Pyridine nucleotide-dis 91.4 0.2 6.7E-06 51.9 5.7 55 512-579 188-242 (480)
421 4g65_A TRK system potassium up 91.4 0.046 1.6E-06 56.1 0.8 65 511-581 4-68 (461)
422 3s5w_A L-ornithine 5-monooxyge 91.3 0.21 7.1E-06 51.4 5.7 64 168-231 123-192 (463)
423 3oc4_A Oxidoreductase, pyridin 91.2 0.46 1.6E-05 48.6 8.2 57 172-232 189-245 (452)
424 4a5l_A Thioredoxin reductase; 91.2 0.18 6.2E-06 48.6 4.8 33 512-548 154-186 (314)
425 1ebd_A E3BD, dihydrolipoamide 91.2 0.2 7E-06 51.3 5.5 59 172-233 211-272 (455)
426 3ic5_A Putative saccharopine d 91.1 0.21 7.3E-06 39.9 4.4 34 511-548 6-40 (118)
427 4g6h_A Rotenone-insensitive NA 90.9 0.21 7.2E-06 51.9 5.3 60 512-580 219-288 (502)
428 1ojt_A Surface protein; redox- 90.8 0.22 7.6E-06 51.5 5.3 59 172-233 226-288 (482)
429 3k7m_X 6-hydroxy-L-nicotine ox 90.8 0.33 1.1E-05 49.3 6.5 52 175-230 207-258 (431)
430 1dxl_A Dihydrolipoamide dehydr 90.4 0.31 1E-05 50.2 6.0 59 172-233 218-281 (470)
431 4at0_A 3-ketosteroid-delta4-5a 90.3 0.55 1.9E-05 48.9 7.9 59 172-232 202-265 (510)
432 1sez_A Protoporphyrinogen oxid 90.1 3.1 0.00011 43.0 13.5 44 187-233 256-310 (504)
433 2hmt_A YUAA protein; RCK, KTN, 89.9 0.2 6.8E-06 41.8 3.4 32 512-547 8-39 (144)
434 1v59_A Dihydrolipoamide dehydr 89.6 0.35 1.2E-05 49.9 5.6 61 172-233 224-289 (478)
435 1zmd_A Dihydrolipoyl dehydroge 89.6 0.42 1.4E-05 49.3 6.2 59 172-233 220-284 (474)
436 3ntd_A FAD-dependent pyridine 89.6 0.56 1.9E-05 49.6 7.3 62 172-233 192-269 (565)
437 2a8x_A Dihydrolipoyl dehydroge 89.4 0.45 1.5E-05 48.9 6.3 58 172-232 212-272 (464)
438 4dna_A Probable glutathione re 89.4 0.46 1.6E-05 48.8 6.3 58 172-232 211-269 (463)
439 3dk9_A Grase, GR, glutathione 89.3 0.57 1.9E-05 48.3 7.0 56 511-579 188-243 (478)
440 2wdq_A Succinate dehydrogenase 89.1 0.95 3.3E-05 48.0 8.6 60 172-233 143-208 (588)
441 2xag_A Lysine-specific histone 88.9 15 0.0005 40.7 18.0 47 178-228 574-626 (852)
442 3tl2_A Malate dehydrogenase; c 88.8 0.43 1.5E-05 46.0 5.1 37 506-546 4-41 (315)
443 1d5t_A Guanine nucleotide diss 88.6 0.29 1E-05 49.8 4.1 58 172-232 234-291 (433)
444 3l4b_C TRKA K+ channel protien 88.5 0.27 9.1E-06 44.7 3.3 33 512-548 2-34 (218)
445 3ado_A Lambda-crystallin; L-gu 88.5 0.32 1.1E-05 46.9 4.0 34 511-548 7-40 (319)
446 3lad_A Dihydrolipoamide dehydr 88.5 0.92 3.2E-05 46.7 7.9 57 172-231 221-280 (476)
447 2h88_A Succinate dehydrogenase 88.4 0.81 2.8E-05 48.8 7.4 60 172-233 155-219 (621)
448 2cdu_A NADPH oxidase; flavoenz 88.2 0.69 2.4E-05 47.3 6.7 59 172-233 191-249 (452)
449 1chu_A Protein (L-aspartate ox 88.1 0.33 1.1E-05 51.0 4.2 61 172-234 138-211 (540)
450 3dfz_A SIRC, precorrin-2 dehyd 88.0 0.49 1.7E-05 42.9 4.7 34 510-547 31-64 (223)
451 3urh_A Dihydrolipoyl dehydroge 88.0 0.62 2.1E-05 48.2 6.2 58 172-232 239-301 (491)
452 1f0y_A HCDH, L-3-hydroxyacyl-C 87.7 0.46 1.6E-05 45.6 4.6 32 512-547 17-48 (302)
453 3i83_A 2-dehydropantoate 2-red 87.6 0.49 1.7E-05 45.9 4.8 33 511-547 3-35 (320)
454 3dgh_A TRXR-1, thioredoxin red 87.6 1 3.5E-05 46.5 7.5 58 172-231 227-289 (483)
455 2e5v_A L-aspartate oxidase; ar 87.5 0.66 2.3E-05 47.7 6.0 61 171-236 118-181 (472)
456 3gvi_A Malate dehydrogenase; N 87.5 0.54 1.8E-05 45.5 4.9 36 508-547 5-41 (324)
457 2x8g_A Thioredoxin glutathione 87.3 0.78 2.7E-05 48.8 6.6 54 512-579 288-341 (598)
458 1pzg_A LDH, lactate dehydrogen 87.3 0.51 1.8E-05 45.9 4.7 33 511-547 10-43 (331)
459 3kd9_A Coenzyme A disulfide re 87.2 0.47 1.6E-05 48.5 4.7 33 512-548 150-182 (449)
460 2hjr_A Malate dehydrogenase; m 87.1 0.58 2E-05 45.5 5.0 33 511-547 15-48 (328)
461 1kyq_A Met8P, siroheme biosynt 86.9 0.34 1.2E-05 45.5 3.0 33 511-547 14-46 (274)
462 3h8l_A NADH oxidase; membrane 86.8 0.92 3.1E-05 45.6 6.5 52 172-230 218-269 (409)
463 3k96_A Glycerol-3-phosphate de 86.7 0.54 1.9E-05 46.3 4.5 39 505-547 24-62 (356)
464 3dtt_A NADP oxidoreductase; st 86.5 0.52 1.8E-05 43.7 4.1 38 507-548 16-53 (245)
465 1rsg_A FMS1 protein; FAD bindi 86.5 0.94 3.2E-05 47.2 6.5 44 186-231 214-257 (516)
466 3hn2_A 2-dehydropantoate 2-red 86.1 0.56 1.9E-05 45.3 4.2 33 511-547 3-35 (312)
467 1zk7_A HGII, reductase, mercur 86.0 0.97 3.3E-05 46.4 6.3 58 172-233 216-273 (467)
468 3qfa_A Thioredoxin reductase 1 86.0 0.97 3.3E-05 47.1 6.3 54 512-579 212-265 (519)
469 3ghy_A Ketopantoate reductase 85.6 0.65 2.2E-05 45.3 4.5 32 511-546 4-35 (335)
470 2bcg_G Secretory pathway GDP d 85.6 0.85 2.9E-05 46.6 5.6 57 173-232 243-301 (453)
471 4e12_A Diketoreductase; oxidor 85.5 0.67 2.3E-05 44.0 4.4 34 511-548 5-38 (283)
472 3l8k_A Dihydrolipoyl dehydroge 85.5 1.3 4.3E-05 45.5 6.8 34 511-548 173-206 (466)
473 2raf_A Putative dinucleotide-b 85.3 0.88 3E-05 40.9 4.9 34 511-548 20-53 (209)
474 3l9w_A Glutathione-regulated p 85.3 0.58 2E-05 47.1 4.0 62 511-579 5-66 (413)
475 3p7m_A Malate dehydrogenase; p 85.2 0.87 3E-05 44.0 5.1 36 508-547 3-39 (321)
476 1lld_A L-lactate dehydrogenase 85.0 0.78 2.7E-05 44.4 4.7 33 511-547 8-42 (319)
477 2v6b_A L-LDH, L-lactate dehydr 84.7 0.85 2.9E-05 43.8 4.7 32 512-547 2-35 (304)
478 3k6j_A Protein F01G10.3, confi 84.6 0.92 3.2E-05 46.0 5.1 34 511-548 55-88 (460)
479 1ks9_A KPA reductase;, 2-dehyd 84.3 0.92 3.2E-05 43.0 4.9 33 512-548 2-34 (291)
480 2dpo_A L-gulonate 3-dehydrogen 84.3 0.72 2.5E-05 44.6 4.0 34 511-548 7-40 (319)
481 2y0c_A BCEC, UDP-glucose dehyd 84.2 0.73 2.5E-05 47.4 4.3 34 510-547 8-41 (478)
482 1jw9_B Molybdopterin biosynthe 83.9 0.77 2.6E-05 42.6 3.9 34 510-547 31-65 (249)
483 3lk7_A UDP-N-acetylmuramoylala 83.9 1.2 4.2E-05 45.3 5.8 33 511-547 10-42 (451)
484 1y6j_A L-lactate dehydrogenase 83.7 1 3.6E-05 43.4 4.9 34 510-547 7-42 (318)
485 3ic9_A Dihydrolipoamide dehydr 83.5 1.9 6.6E-05 44.5 7.2 57 172-232 215-275 (492)
486 1t2d_A LDH-P, L-lactate dehydr 83.5 1.1 3.6E-05 43.5 4.8 33 511-547 5-38 (322)
487 3ics_A Coenzyme A-disulfide re 83.4 1.4 4.8E-05 46.7 6.3 56 172-232 228-283 (588)
488 2ewd_A Lactate dehydrogenase,; 82.9 0.9 3.1E-05 43.9 4.1 33 511-547 5-38 (317)
489 3pqe_A L-LDH, L-lactate dehydr 82.9 1 3.5E-05 43.5 4.5 34 510-547 5-40 (326)
490 3oj0_A Glutr, glutamyl-tRNA re 82.9 0.55 1.9E-05 39.3 2.3 33 511-547 22-54 (144)
491 4b1b_A TRXR, thioredoxin reduc 82.9 2 6.8E-05 44.9 7.0 60 172-234 263-322 (542)
492 4dio_A NAD(P) transhydrogenase 82.8 1.2 4E-05 44.3 4.9 35 510-548 190-224 (405)
493 3g17_A Similar to 2-dehydropan 82.5 0.72 2.4E-05 44.1 3.2 33 511-547 3-35 (294)
494 2ew2_A 2-dehydropantoate 2-red 82.3 1 3.4E-05 43.4 4.2 32 512-547 5-36 (316)
495 1vg0_A RAB proteins geranylger 82.3 2.5 8.5E-05 44.9 7.4 55 171-227 377-433 (650)
496 1cjc_A Protein (adrenodoxin re 82.2 1.2 4.3E-05 45.5 5.1 34 511-548 146-200 (460)
497 1zcj_A Peroxisomal bifunctiona 82.0 1 3.6E-05 46.0 4.4 33 511-547 38-70 (463)
498 3ego_A Probable 2-dehydropanto 82.0 1.4 4.7E-05 42.4 5.0 32 511-547 3-34 (307)
499 1bg6_A N-(1-D-carboxylethyl)-L 82.0 1 3.5E-05 44.2 4.3 33 511-547 5-37 (359)
500 3gg2_A Sugar dehydrogenase, UD 81.9 1 3.4E-05 45.9 4.2 33 511-547 3-35 (450)
No 1
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=3.3e-33 Score=295.03 Aligned_cols=286 Identities=19% Similarity=0.181 Sum_probs=217.4
Q ss_pred ccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc---EEEecEEEEecCCCchhhhhcCCC
Q psy9964 164 RISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE---SIECKLLLGTDGARSQVRNAMNVQ 240 (595)
Q Consensus 164 ~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~---~~~adlvVgADG~~S~vR~~l~~~ 240 (595)
++++.++|..|++.|.+.+.+.|++|+++++|+++++ ++++|+|++++|+ ++++|+||||||.+|.||++++++
T Consensus 98 ~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~---~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~ 174 (500)
T 2qa1_A 98 QAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTD---DGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFD 174 (500)
T ss_dssp GCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEE---ETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCC
T ss_pred CceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEE---cCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCC
Confidence 4578999999999999999988999999999999986 4668999998886 899999999999999999999988
Q ss_pred CcccCCCCeEEEEEEEeccCCCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhh-HHHHhCCCchHHHHHHHHhcCCC
Q psy9964 241 YSNWSYDQKGIVATVKISTSPPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPEN-AKALLQMPGESFVDALNSEFNKP 319 (595)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 319 (595)
.....+...++.+.+....++ .. ....+.++++++++|.+++..++++...... .......+.+++.+.+...+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 252 (500)
T 2qa1_A 175 FPGTAATMEMYLADIKGVELQ-PR-MIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDD 252 (500)
T ss_dssp CCEECCCCEEEEEEEESCCCC-CE-EEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCC
T ss_pred cCCCccceEEEEEEEEeCCCC-Cc-eEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCC
Confidence 777677667777777654322 21 2334567889999999988777776643221 11112234444444433322110
Q ss_pred cchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccchhhh
Q psy9964 320 AELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQGVN 399 (595)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n 399 (595)
+. +.. ..+...|+.....+++|..|||+|+|||||.|+|++|||+|
T Consensus 253 ------------------------------~~--~~~--~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n 298 (500)
T 2qa1_A 253 ------------------------------IA--HAE--PVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMN 298 (500)
T ss_dssp ------------------------------CT--TSE--EEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHH
T ss_pred ------------------------------CC--ccc--eeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchh
Confidence 00 000 11223466666678899999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccChhHHH
Q psy9964 400 LGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSLTPVKILGNLGFQLVNAVRPIKS 479 (595)
Q Consensus 400 ~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 479 (595)
+||+||.+|+++|...+. +.. .+.+|+.|+++|++++..++..++.+.+++.. ++....+|+.++..+ ..|.+++
T Consensus 299 ~gi~DA~~La~~La~~~~-g~~--~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~~ 373 (500)
T 2qa1_A 299 TSIQDAVNLGWKLGAVVN-GTA--TEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELI-QYGEVAR 373 (500)
T ss_dssp HHHHHHHHHHHHHHHHHT-TSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CGGGHHHHHHHHHHH-TSHHHHH
T ss_pred hhHHHHHHHHHHHHHHHc-CCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHHH
Confidence 999999999999987664 333 57899999999999999999999999998875 566678898887766 6888888
Q ss_pred HHHHHHHHHhhhhh
Q psy9964 480 ILCDIFMRTSMEKV 493 (595)
Q Consensus 480 ~~~~~~~~~~~~~~ 493 (595)
.+.+.+++....|.
T Consensus 374 ~~~~~~~g~~~~Y~ 387 (500)
T 2qa1_A 374 HLAGMVSGLEITYD 387 (500)
T ss_dssp HHHHHHHSTTCCCC
T ss_pred HHhhhhccCCCccC
Confidence 88888877665554
No 2
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=2.1e-33 Score=296.47 Aligned_cols=287 Identities=18% Similarity=0.170 Sum_probs=217.7
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc---EEEecEEEEecCCCchhhhhcCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE---SIECKLLLGTDGARSQVRNAMNV 239 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~---~~~adlvVgADG~~S~vR~~l~~ 239 (595)
.++++.++|..|++.|.+.+.+.|++|+++++|+++++ ++++|+|++.+|+ +++||+||||||.+|.||+.+++
T Consensus 98 ~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~---~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~ 174 (499)
T 2qa2_A 98 HYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTD---EGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGF 174 (499)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEE---CSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred CCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCC
Confidence 34578999999999999999888999999999999996 5678999999886 89999999999999999999998
Q ss_pred CCcccCCCCeEEEEEEEeccCCCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhH-HHHhCCCchHHHHHHHHhcCC
Q psy9964 240 QYSNWSYDQKGIVATVKISTSPPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENA-KALLQMPGESFVDALNSEFNK 318 (595)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 318 (595)
+.....+...++.+.+....++ .. ....+.++++++++|++++..++++....... ......+.+++.+.+...+..
T Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~-~~-~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 252 (499)
T 2qa2_A 175 DFPGTSASREMFLADIRGCEIT-PR-PIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQ 252 (499)
T ss_dssp CCCEECCCCCEEEEEEESCCCC-CE-EEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSC
T ss_pred CCCCCCCccEEEEEEEEECCCC-cc-eEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCC
Confidence 8777666667777777654322 21 23345678899999999888777766432110 000112333333333322211
Q ss_pred CcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccchhh
Q psy9964 319 PAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQGV 398 (595)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~ 398 (595)
. +. +. ...+...|++....+++|..|||+|+|||||.|+|++|||+
T Consensus 253 ~------------------------------~~--~~--~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~ 298 (499)
T 2qa2_A 253 D------------------------------IS--HG--EPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGM 298 (499)
T ss_dssp C------------------------------CT--TC--EEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHH
T ss_pred C------------------------------CC--cc--ceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccch
Confidence 0 00 00 01122346666667889999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccChhHH
Q psy9964 399 NLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSLTPVKILGNLGFQLVNAVRPIK 478 (595)
Q Consensus 399 n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 478 (595)
|+||+||.+|+++|...+. +.. .+.+|+.|+++|++++..++..++.+.+++.. ++....+|+.++..+ ..|.++
T Consensus 299 n~gi~DA~~La~~La~~l~-g~~--~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~-~~~~~~~R~~~~~~~-~~~~~~ 373 (499)
T 2qa2_A 299 NVSVQDSVNLGWKLAAVVS-GRA--PAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS-GDEMQPLRDVLSELI-RYDEVS 373 (499)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TSS--CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CGGGHHHHHHHHHHH-TSSHHH
T ss_pred hhhHHHHHHHHHHHHHHHc-CCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHhh-cCHHHH
Confidence 9999999999999987664 333 57899999999999999999999999998874 566778899888776 678888
Q ss_pred HHHHHHHHHHhhhhh
Q psy9964 479 SILCDIFMRTSMEKV 493 (595)
Q Consensus 479 ~~~~~~~~~~~~~~~ 493 (595)
+.+.+.+++....|.
T Consensus 374 ~~~~~~~~~~~~~Y~ 388 (499)
T 2qa2_A 374 RHLAGMVSGLDIRYE 388 (499)
T ss_dssp HHHHHHHHTTTCCCC
T ss_pred HHHHHHHhCCCCccC
Confidence 888888887666554
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=1.1e-33 Score=302.36 Aligned_cols=289 Identities=19% Similarity=0.222 Sum_probs=220.7
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEE--cCC-cEEEecEEEEecCCCchhhhhcCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKF--ESG-ESIECKLLLGTDGARSQVRNAMNV 239 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~--~dG-~~~~adlvVgADG~~S~vR~~l~~ 239 (595)
.+.++.++|..|.+.|.+.+.+.|++|+++++|+++++ ++++|+|++ .+| ++++||+||+|||.+|.||+.+++
T Consensus 139 ~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~---~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi 215 (570)
T 3fmw_A 139 HPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQ---DAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAAD 215 (570)
T ss_dssp CCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCB---CSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTC
T ss_pred CCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE---cCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCC
Confidence 44678999999999999999888999999999999996 567888888 788 689999999999999999999998
Q ss_pred CCcccCCCCeEEEEEEEeccCCCCceEEEEeCCCCcEEE-eeCCCCCe-EEEEecCHhh-HHHHhCCCchHHHHHHHHhc
Q psy9964 240 QYSNWSYDQKGIVATVKISTSPPNRTAWQRFTPSGTVAL-LPLSDEFS-SLVWATTPEN-AKALLQMPGESFVDALNSEF 316 (595)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 316 (595)
......|...++.+.+....+. ....+ .+.+.|++++ +|++++.. +++|...... .......+.+++.+.+...+
T Consensus 216 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~-~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 293 (570)
T 3fmw_A 216 RFPGTEATVRALIGYVTTPERE-VPRRW-ERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVR 293 (570)
T ss_dssp CCCCCCCCEEEEEEECCCCSCS-SCCCC-CCCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSS
T ss_pred CCccceeeeEEEEEEEEecCCC-cceEE-EecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHh
Confidence 8887788777777766654432 11111 3456777777 79998877 7777654322 11122233333333222111
Q ss_pred CCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccc-cceeeeccccccccccCCCEEEEccccccccCccc
Q psy9964 317 NKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEK-SRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAG 395 (595)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~G 395 (595)
+. .+...... +...|++....+++|..|||+|+|||||.++|++|
T Consensus 294 ~~----------------------------------~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~G 339 (570)
T 3fmw_A 294 GT----------------------------------PLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGG 339 (570)
T ss_dssp SC----------------------------------CCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSS
T ss_pred hc----------------------------------ccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcC
Confidence 10 01111112 44567877778899999999999999999999999
Q ss_pred hhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCchHHHHHHHHHHHhhccCh
Q psy9964 396 QGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSLTPVKILGNLGFQLVNAVR 475 (595)
Q Consensus 396 qG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 475 (595)
||+|+||+||.+|+++|...+.. .. .+.+|+.|+++|++++..++..++.+.++|+...++...+|+.++..+ ..|
T Consensus 340 qG~n~gl~DA~~La~~La~~~~g-~~--~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~~~~~~lR~~~~~l~-~~~ 415 (570)
T 3fmw_A 340 QGLNTGLQDAVNLGWKLAARVRG-WG--SEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELL-GTD 415 (570)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHS-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTHHHHHHHHHHHT-TSH
T ss_pred cCHhHHHHHHHHHHHHHHHHHcC-CC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHh-cCH
Confidence 99999999999999999887653 33 588999999999999999999999999999886665889999999988 799
Q ss_pred hHHHHHHHHHHHHhhhhhh
Q psy9964 476 PIKSILCDIFMRTSMEKVT 494 (595)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~ 494 (595)
.+++.+++.++|...+|..
T Consensus 416 ~~~~~~~~~~~g~~~~Y~~ 434 (570)
T 3fmw_A 416 EVNRYFTGMITGTDVRYAT 434 (570)
T ss_dssp HHHHHHHHHHHSTTCCCCC
T ss_pred HHHHHHHHHHhCCCcccCC
Confidence 9999999999998888753
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-32 Score=283.53 Aligned_cols=299 Identities=16% Similarity=0.191 Sum_probs=209.7
Q ss_pred cccccCcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcC-CceEEeCCeEeEEecCCCCCCce--EEE
Q psy9964 135 YVMIKGTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTL-NIDIVYQKKVAHYELPEQPLNNV--KIK 211 (595)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-gv~i~~~~~v~~v~~~~~~~~~v--~v~ 211 (595)
...+...+.+++.++.....++......+.+++.++|..|.+.|.+.+.+. |++|+++++|++++. +++++ .|+
T Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~---~~~~v~g~v~ 146 (399)
T 2x3n_A 70 RGGRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQR---DERHAIDQVR 146 (399)
T ss_dssp TTCEEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEE---CTTSCEEEEE
T ss_pred hCCCcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEE---cCCceEEEEE
Confidence 334445667777766555566655433456789999999999999999985 999999999999986 45678 899
Q ss_pred EcCCcEEEecEEEEecCCCchhhhhcCCCCccc--CCCC--eEEEEEEEeccCCCCceEEEEeCC-CCcEEEeeCCCCCe
Q psy9964 212 FESGESIECKLLLGTDGARSQVRNAMNVQYSNW--SYDQ--KGIVATVKISTSPPNRTAWQRFTP-SGTVALLPLSDEFS 286 (595)
Q Consensus 212 ~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~ 286 (595)
+.||+++++|+||+|||.+|.+|+.++...... .+.. .++...++...+ . . . .++.+ +++++++|++++.
T Consensus 147 ~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~-~-~-~-~~~~~~~~~~~~~p~~~~~- 221 (399)
T 2x3n_A 147 LNDGRVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAE-R-N-R-LYVDSQGGLAYFYPIGFDR- 221 (399)
T ss_dssp ETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHH-C-E-E-EEECTTSCEEEEEEETTTE-
T ss_pred ECCCCEEECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCC-C-c-c-EEEcCCCcEEEEEEcCCCE-
Confidence 999999999999999999999999998765444 4444 555544433221 1 1 3 56678 8999999998744
Q ss_pred EEEEec--CHhhHHHHhC-CCchHHHHHHHHhcCCCcchhhHHHHhhhhhh-chhhhccccCCCcccCCCccceeccccc
Q psy9964 287 SLVWAT--TPENAKALLQ-MPGESFVDALNSEFNKPAELNESIQVATKFTH-NVLEFFNLSTGNEQVVPPRVMSVEEKSR 362 (595)
Q Consensus 287 ~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (595)
+.|.+ +.+....+.. .+.+.+.+.+. .+... +. ..+. .......
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~-----------------~~~~~~~ 269 (399)
T 2x3n_A 222 -ARLVVSFPREEARELMADTRGESLRRRLQ-RFVGD-------------ESAEAIA-----------------AVTGTSR 269 (399)
T ss_dssp -EEEEEECCHHHHHHHHHSTTSHHHHHHHH-TTCCG-------------GGHHHHH-----------------TCCCSTT
T ss_pred -EEEEEEeCccccccccccCCHHHHHHHHh-hcCCc-------------chhhHHh-----------------cCCccce
Confidence 44444 5543222221 33444443332 11110 00 0000 0010123
Q ss_pred eeeeccc-cccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccch
Q psy9964 363 AAFPLGF-GHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLP 441 (595)
Q Consensus 363 ~~~~~~~-~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~ 441 (595)
..+|+.. ...++|..|||+|+|||||.|+|++|||+|+||+||..|+++|......+.+ .+.+|+.|+++|++++..
T Consensus 270 ~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~--~~~~l~~Y~~~r~~~~~~ 347 (399)
T 2x3n_A 270 FKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACA--LEDALAGYQAERFPVNQA 347 (399)
T ss_dssp CEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSC--HHHHHHHHHHHHHHHHHH
T ss_pred EEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccch--HHHHHHHHHHHhccHHHH
Confidence 4456654 5678899999999999999999999999999999999999999887654444 578999999999999999
Q ss_pred HHHHHHHHHHhhcCCchHHHHHHHHHHHhhccChh
Q psy9964 442 VMLSIDLMYRVYRSSLTPVKILGNLGFQLVNAVRP 476 (595)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 476 (595)
++..++.+.+++..++++..++ +.+++.+...|.
T Consensus 348 ~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 381 (399)
T 2x3n_A 348 IVSYGHALATSLEDRQRFAGVF-DTALQGSSRTPE 381 (399)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HC----------
T ss_pred HHHHHHHhhhhhcccCchHHHH-HHHHhhhcCCCc
Confidence 9999999999999888888888 888887776663
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=7.5e-32 Score=279.16 Aligned_cols=304 Identities=15% Similarity=0.131 Sum_probs=219.4
Q ss_pred HHHHhhhcccccCcEEEEecC-CCcceEEcCCcc--CccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCC
Q psy9964 128 LKIQILKYVMIKGTSKVWGHS-SDDLLEFNKAHN--YQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQP 204 (595)
Q Consensus 128 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~ 204 (595)
+.+++.+.+.+...+.+++.+ +.....++.... .....++.++|..|++.|.+.+.+ ++|+++++|++++. +
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~---~ 154 (407)
T 3rp8_A 80 MGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEE---D 154 (407)
T ss_dssp CHHHHHHHSCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEE---E
T ss_pred CHHHHHhhcCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEe---c
Confidence 345566666777788888887 666666665321 123568999999999999999976 89999999999996 5
Q ss_pred CCceEEEEcCCcEEEecEEEEecCCCchhhhhc-CCCCcccCCCCeEEEEEEEeccCCCCceEE-EEeCCCCcEEEeeCC
Q psy9964 205 LNNVKIKFESGESIECKLLLGTDGARSQVRNAM-NVQYSNWSYDQKGIVATVKISTSPPNRTAW-QRFTPSGTVALLPLS 282 (595)
Q Consensus 205 ~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~p~~ 282 (595)
+++++|++.||+++++|+||+|||++|.||+.+ +.......+....+...+..+........+ .++.++++++++|++
T Consensus 155 ~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 234 (407)
T 3rp8_A 155 ADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVS 234 (407)
T ss_dssp TTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEET
T ss_pred CCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcC
Confidence 678999999999999999999999999999999 654322222233444455544322233333 334678899999999
Q ss_pred CCCeEEEEecCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccc
Q psy9964 283 DEFSSLVWATTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSR 362 (595)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (595)
++...+++....... ...+.+.+.+.+.+.+....+ .+.++++...+ .....+
T Consensus 235 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~--------------~~~~~~ 287 (407)
T 3rp8_A 235 AGRFYFFFDVPLPAG---LAEDRDTLRADLSRYFAGWAP----------PVQKLIAALDP--------------QTTNRI 287 (407)
T ss_dssp TTEEEEEEEEECCTT---CSCCTTTHHHHHHHHTTTCCH----------HHHHHHHHSCG--------------GGCEEE
T ss_pred CCeEEEEEEeCCCcC---CCCCchhHHHHHHHHhcCCCh----------HHHHHHHcCCc--------------cceeEE
Confidence 987777666543221 122334455555555433221 11112221100 000113
Q ss_pred eeeeccccccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchH
Q psy9964 363 AAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPV 442 (595)
Q Consensus 363 ~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~ 442 (595)
..+++.. .++|+.+||+|+|||||.|+|++|||+|+||+||..|+++|... + + .+.+|+.|+++|++++..+
T Consensus 288 ~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~-~--~~~~l~~Y~~~r~~~~~~~ 359 (407)
T 3rp8_A 288 EIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---R-D--IAAALREYEAQRCDRVRDL 359 (407)
T ss_dssp EEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---C-C--HHHHHHHHHHHHHHHHHHH
T ss_pred eeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---C-C--HHHHHHHHHHHHHHHHHHH
Confidence 3444432 37889999999999999999999999999999999999999742 2 3 6889999999999999999
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHhh
Q psy9964 443 MLSIDLMYRVYRSSLTPVKILGNLGFQLV 471 (595)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 471 (595)
+..++.+.++++..++.....|+..++..
T Consensus 360 ~~~s~~~~~~~~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 360 VLKARKRCDITHGKDMQLTEAWYQELREE 388 (407)
T ss_dssp HHHHHHHHHHHTTTTHHHHHHHHHHHHSC
T ss_pred HHHHHHhhhhhhcCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999998754
No 6
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.97 E-value=1.8e-31 Score=275.27 Aligned_cols=316 Identities=13% Similarity=0.128 Sum_probs=210.5
Q ss_pred hhhcccccCcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEE
Q psy9964 132 ILKYVMIKGTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIK 211 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~ 211 (595)
+.+.+.+...+.+++..+ ...++.........++.++|..+.+.|.+.+.+.|++|+++++|++++.. +++.+.|+
T Consensus 65 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~ 140 (394)
T 1k0i_A 65 MARDGLVHEGVEIAFAGQ--RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVT 140 (394)
T ss_dssp HHHHCEEESCEEEEETTE--EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEE
T ss_pred HHhcCCccceEEEEECCc--eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEE
Confidence 334444555666665432 22333221111346788999999999999998889999999999999862 34568888
Q ss_pred E-cCCc--EEEecEEEEecCCCchhhhhcCCCCcccCCCC---eEEEEEEEeccCCCCceEEEEeCCCCcEEEeeCCCCC
Q psy9964 212 F-ESGE--SIECKLLLGTDGARSQVRNAMNVQYSNWSYDQ---KGIVATVKISTSPPNRTAWQRFTPSGTVALLPLSDEF 285 (595)
Q Consensus 212 ~-~dG~--~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 285 (595)
+ .||+ ++++|+||+|||.+|.||+.++.... ..|.. ..+........+......+ ...++++.++.|..++.
T Consensus 141 ~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 218 (394)
T 1k0i_A 141 FERDGERLRLDCDYIAGCDGFHGISRQSIPAERL-KVFERVYPFGWLGLLADTPPVSHELIY-ANHPRGFALCSQRSATR 218 (394)
T ss_dssp EEETTEEEEEECSEEEECCCTTCSTGGGSCGGGC-EEEEEEEEEEEEEEEESSCCSCSSCEE-ECCTTCCEEEEEEETTE
T ss_pred EecCCcEEEEEeCEEEECCCCCcHHHHhcCcccc-ccccccccceeEEEecCCCCCccceEE-EEcCCceEEEEecCCCc
Confidence 8 7887 79999999999999999999965421 11211 1111111111111112222 22355555555555566
Q ss_pred eEEEEecCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceee
Q psy9964 286 SSLVWATTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAF 365 (595)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (595)
.++++...... .....+.+.+.+.+.+.+.. ... + .+.. ........+
T Consensus 219 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~-----------------~~~----~-----~~~~----~~~~~~~~~ 266 (394)
T 1k0i_A 219 SQYYVQVPLSE--KVEDWSDERFWTELKARLPS-----------------EVA----E-----KLVT----GPSLEKSIA 266 (394)
T ss_dssp EEEEEEECTTC--CGGGCCHHHHHHHHHHTSCH-----------------HHH----H-----HCCC----CCEEEEEEE
T ss_pred EEEEEEeCCCC--CccccCHHHHHHHHHHhhCc-----------------ccc----c-----cccc----CcceeeEEE
Confidence 66666654321 11122333344444333211 000 0 0000 000012335
Q ss_pred eccccccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHH
Q psy9964 366 PLGFGHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLS 445 (595)
Q Consensus 366 ~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~ 445 (595)
|+......+|..|||+|+|||||.|+|++|||+|+||+||..|+++|......+ .+.+|+.|+++|++++..++..
T Consensus 267 ~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~----~~~~L~~Y~~~r~~~~~~~~~~ 342 (394)
T 1k0i_A 267 PLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG----RGELLERYSAICLRRIWKAERF 342 (394)
T ss_dssp EEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC----CGGGGGGHHHHHHHHHHHHHHH
T ss_pred EhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC----chHHHHHHHHHHHHHHHHHHHH
Confidence 555555778889999999999999999999999999999999999998765432 3579999999999999999999
Q ss_pred HHHHHHhhc---CCchHHHHHHHHHHHhhccChhHHHHHHHHHHHHh
Q psy9964 446 IDLMYRVYR---SSLTPVKILGNLGFQLVNAVRPIKSILCDIFMRTS 489 (595)
Q Consensus 446 ~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (595)
++.+..++. .+.++...+|+..+..+...|.+++.+++.++|..
T Consensus 343 s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g~p 389 (394)
T 1k0i_A 343 SWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVGLP 389 (394)
T ss_dssp HHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhcCCC
Confidence 988877765 34578889999999999999999999999988763
No 7
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.97 E-value=6.6e-30 Score=278.13 Aligned_cols=294 Identities=17% Similarity=0.192 Sum_probs=199.5
Q ss_pred HHHHhhhcccccCcEEEEecCCCcceE----EcCCcc-CccccceeeeHHHHHHHHHHHHhcCC---ceEEeCCeEeEEe
Q psy9964 128 LKIQILKYVMIKGTSKVWGHSSDDLLE----FNKAHN-YQDRISYIVENDLIIDAVTKKLNTLN---IDIVYQKKVAHYE 199 (595)
Q Consensus 128 l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~R~~L~~~L~~~~~~~g---v~i~~~~~v~~v~ 199 (595)
+.+++.+.+.+...+.+|+.++...+. ++.... ......+.++|..|+++|.+.+.+.| ++|+++++|++++
T Consensus 70 l~~~l~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~ 149 (665)
T 1pn0_A 70 LADKILSEANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKME 149 (665)
T ss_dssp CHHHHHTTCBCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEE
T ss_pred CHHHHHHhccccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEE
Confidence 345555666667778888865432222 221111 12334578999999999999998855 8999999999998
Q ss_pred cCCC-----CCCceEEEEc------------------------------------------CC--cEEEecEEEEecCCC
Q psy9964 200 LPEQ-----PLNNVKIKFE------------------------------------------SG--ESIECKLLLGTDGAR 230 (595)
Q Consensus 200 ~~~~-----~~~~v~v~~~------------------------------------------dG--~~~~adlvVgADG~~ 230 (595)
++++ ++.+|+|++. +| ++++||+||||||++
T Consensus 150 ~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~ 229 (665)
T 1pn0_A 150 IDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGH 229 (665)
T ss_dssp ECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTT
T ss_pred ecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCC
Confidence 7310 1246888774 45 479999999999999
Q ss_pred chhhhhcCCCCcccCCCCeEEEEEEE-eccCCC-CceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHH----HHhCCC
Q psy9964 231 SQVRNAMNVQYSNWSYDQKGIVATVK-ISTSPP-NRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAK----ALLQMP 304 (595)
Q Consensus 231 S~vR~~l~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~ 304 (595)
|.||++++++.....+...+....+. ....+. .........+.++++++|.+++..++++........ .....+
T Consensus 230 S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t 309 (665)
T 1pn0_A 230 SWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFT 309 (665)
T ss_dssp CHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCC
T ss_pred CHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCC
Confidence 99999999876655543222222221 111122 112222223678899999999888888776543211 112233
Q ss_pred chHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeecccccccccc-CCCEEEE
Q psy9964 305 GESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYI-GPGCALL 383 (595)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~grvvLv 383 (595)
.+.+.+.+.+. +. |+. ..+. ...++..|++....+++|. .|||+|+
T Consensus 310 ~e~~~~~~~~~---------------------~~---~~~-------~~~~--~~~~~~~~~~~~r~a~~~~~~gRV~L~ 356 (665)
T 1pn0_A 310 PEVVIANAKKI---------------------FH---PYT-------FDVQ--QLDWFTAYHIGQRVTEKFSKDERVFIA 356 (665)
T ss_dssp HHHHHHHHHHH---------------------HT---TSC-------CEEE--EEEEEEEEEEEEEECSCSEETTTEEEC
T ss_pred HHHHHHHHHHH---------------------hC---ccc-------Ccee--eEEEEEeeeccceehhhcccCCCEEEE
Confidence 33333333222 11 100 0111 1234566777777889998 7999999
Q ss_pred ccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCc
Q psy9964 384 GDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSL 457 (595)
Q Consensus 384 GDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~ 457 (595)
|||||.|+|++|||+|+||+||.+|+|+|...+. +.. .+.+|+.|+++|++++..++..++.+.++|+...
T Consensus 357 GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~-g~a--~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~ 427 (665)
T 1pn0_A 357 GDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT-GRA--KRDILKTYEEERQPFAQALIDFDHQFSRLFSGRP 427 (665)
T ss_dssp GGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT-TCB--CGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCB
T ss_pred ECccccCCCcccCCcchhHHHHHHHHHHHHHHHc-CCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999987664 433 5789999999999999999999999999987653
No 8
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.97 E-value=1.4e-30 Score=270.23 Aligned_cols=254 Identities=18% Similarity=0.261 Sum_probs=159.7
Q ss_pred ccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcCCCCcc
Q psy9964 164 RISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMNVQYSN 243 (595)
Q Consensus 164 ~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~ 243 (595)
...+.++|.+|+++|.+.+. .+|+++++|+++++. +++.|+|+|+||++++||+||||||++|.||+++++....
T Consensus 104 ~~~~~i~R~~L~~~L~~~~~---~~v~~~~~v~~~~~~--~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~ 178 (412)
T 4hb9_A 104 EQRLSISRTELKEILNKGLA---NTIQWNKTFVRYEHI--ENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIER 178 (412)
T ss_dssp -CEEEEEHHHHHHHHHTTCT---TTEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCC
T ss_pred ccceEeeHHHHHHHHHhhcc---ceEEEEEEEEeeeEc--CCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccc
Confidence 34578999999999988663 469999999999863 4567999999999999999999999999999999776555
Q ss_pred cCCCCeEEEEEEEeccC-----CC--CceEEEEeCCC--------------CcEEEeeCCCCCeEEEEecC--Hhh-HHH
Q psy9964 244 WSYDQKGIVATVKISTS-----PP--NRTAWQRFTPS--------------GTVALLPLSDEFSSLVWATT--PEN-AKA 299 (595)
Q Consensus 244 ~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~--------------g~~~~~p~~~~~~~~~~~~~--~~~-~~~ 299 (595)
..+....+.+....... +. .......+.+. +....++.......+.|... .+. ...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (412)
T 4hb9_A 179 FDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDN 258 (412)
T ss_dssp EEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTT
T ss_pred cccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEEEeccccccccc
Confidence 44444555555543321 00 00000001111 11111111121222222221 111 111
Q ss_pred HhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeec-cccccccccCC
Q psy9964 300 LLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPL-GFGHSVRYIGP 378 (595)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 378 (595)
....+.+...+.+...+....+ .++.++... .......+.+ ......+|..|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~p----------~~~~li~~~-----------------~~~~~~~~~~~~~~~~~~~~~g 311 (412)
T 4hb9_A 259 ITDFSAEALCDLVQSRMISWDP----------SLHTLVQQS-----------------DMENISPLHLRSMPHLLPWKSS 311 (412)
T ss_dssp GGGCCHHHHHHHHHHHTTTSCH----------HHHHHHHTS-----------------CTTCCEEEEEEECCCCCCCCCC
T ss_pred ccccchHHHHHHHHHHhccCCh----------HHHHHHHhc-----------------ccceeccchhcccccccccccc
Confidence 1223334444444444433211 111122210 0011111111 12245789999
Q ss_pred CEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHH
Q psy9964 379 GCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYR 451 (595)
Q Consensus 379 rvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~ 451 (595)
||+|+|||||+|+|++|||+|+||+||.+|+++|........+ .+.+|+.||++|+|++..++..+....+
T Consensus 312 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~--~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 312 TVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEE--LVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp SEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887655444 5789999999999999999998887654
No 9
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=5.9e-29 Score=266.24 Aligned_cols=252 Identities=16% Similarity=0.161 Sum_probs=182.9
Q ss_pred ccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCC----ceEEEEcCC---cEEEecEEEEecCCCchhhhh
Q psy9964 164 RISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLN----NVKIKFESG---ESIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 164 ~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~----~v~v~~~dG---~~~~adlvVgADG~~S~vR~~ 236 (595)
..++.++|..|.+.|.+.+.+.|++|+++++|+++++ +++ +|+|++.++ ++++||+||+|||.+|.||+.
T Consensus 112 ~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~---~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~ 188 (535)
T 3ihg_A 112 AGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQ---HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRES 188 (535)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE---ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred CcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE---CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHH
Confidence 3478899999999999999989999999999999996 455 899999887 689999999999999999999
Q ss_pred cCCCCcccCCCCeEEEEEEEeccC--C-CC-ceEEEEeCCCCcEEEeeCCC-CCeEEEEecCHhhHHHHhCCCchHHHHH
Q psy9964 237 MNVQYSNWSYDQKGIVATVKISTS--P-PN-RTAWQRFTPSGTVALLPLSD-EFSSLVWATTPENAKALLQMPGESFVDA 311 (595)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~g~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (595)
++++.....+....+...+....+ . .. ...+..+.+.+..+++|+.+ +...+.|...++........+.+.+.+.
T Consensus 189 lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 268 (535)
T 3ihg_A 189 LGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVEL 268 (535)
T ss_dssp TTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHH
T ss_pred cCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHH
Confidence 998776655533333333332211 1 11 12233445777888889887 4556666655432111222344444444
Q ss_pred HHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEcccccccc
Q psy9964 312 LNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIH 391 (595)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~ 391 (595)
+.+.+.... .+. .......|++....+++|..|||+|+|||||.|+
T Consensus 269 l~~~~~~~~-----------------------------~~~-----~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~ 314 (535)
T 3ihg_A 269 IGLALDAPE-----------------------------VKP-----ELVDIQGWEMAARIAERWREGRVFLAGDAAKVTP 314 (535)
T ss_dssp HHHHHTCSS-----------------------------CCC-----EEEEEEEEEEEEEEESCSEETTEEECTTTTEECC
T ss_pred HHHHhCCCC-----------------------------Cce-----eEEEeeEeeeeEEEECccccCCEEEEecccccCC
Confidence 433322100 000 1122445677777789999999999999999999
Q ss_pred CccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcC
Q psy9964 392 PLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRS 455 (595)
Q Consensus 392 P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 455 (595)
|++|||+|+||+||.+|+++|...++ +.. .+.+|+.|+++|++++..++..+....+.+..
T Consensus 315 P~~GqG~n~ai~DA~~La~~La~~l~-g~~--~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~ 375 (535)
T 3ihg_A 315 PTGGMSGNAAVADGFDLAWKLAAVLQ-GQA--GAGLLDTYEDERKVAAELVVAEALAIYAQRMA 375 (535)
T ss_dssp STTSCHHHHHHHHHHHHHHHHHHHHT-TSS--CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CccCCccccccccHHHHHHHHHHHhc-CCC--cHHHHHhhHHHHHHHHHHHHHHHHHhhHhhcc
Confidence 99999999999999999999987654 333 46899999999999999999999888766543
No 10
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.96 E-value=2.8e-28 Score=260.85 Aligned_cols=260 Identities=14% Similarity=0.137 Sum_probs=176.2
Q ss_pred ccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC---C--cEEEecEEEEecCCCchhhhhcC
Q psy9964 164 RISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES---G--ESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 164 ~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d---G--~~~~adlvVgADG~~S~vR~~l~ 238 (595)
..++.++|..|++.|.+.+.+. |+++++|+++++ ++++|+|++.+ | ++++||+||||||.+|.||+.++
T Consensus 130 ~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~---~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 130 EPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQ---RDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp SCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEE---CSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred CcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEE---eCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 4568999999999999999865 999999999996 56778898876 7 37999999999999999999999
Q ss_pred CCCcccCCCCeEEEEEEEeccC-----CCCceEEEEeCCC-CcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHH
Q psy9964 239 VQYSNWSYDQKGIVATVKISTS-----PPNRTAWQRFTPS-GTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDAL 312 (595)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (595)
++.....+....+...+..+.. ......+..+.++ +.++++|++++. .+.+..+... . ..+.+.+.+.+
T Consensus 204 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~~~~~~~~~~-~---~~~~~~~~~~l 278 (549)
T 2r0c_A 204 IDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-LYRLTVGVDD-A---SKSTMDSFELV 278 (549)
T ss_dssp CCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-EEEEEEECST-T---CCSCCCHHHHH
T ss_pred CCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-EEEEEecCCC-C---CCCHHHHHHHH
Confidence 8777666654555555554311 0111222233466 678888986643 2333321111 0 12333333333
Q ss_pred HHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccC
Q psy9964 313 NSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHP 392 (595)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P 392 (595)
.+.+.. .++.. ..+...|++....+++|..|||+|+|||||.|+|
T Consensus 279 ~~~~~~------------------------------~~~~~-----~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P 323 (549)
T 2r0c_A 279 RRAVAF------------------------------DTEIE-----VLSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSP 323 (549)
T ss_dssp HHHBCS------------------------------CCCCE-----EEEEEEEEECCEECSCSEETTEEECGGGTEECCC
T ss_pred HHHhCC------------------------------CCcee-----EEEEecchhHhhhHHhhcCCcEEEEccccccCCC
Confidence 322211 01101 1123456666677889999999999999999999
Q ss_pred ccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCC---------chHHHHH
Q psy9964 393 LAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSS---------LTPVKIL 463 (595)
Q Consensus 393 ~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 463 (595)
++|||+|+||+||.+|+|+|...+.. .. .+.+|+.|+++|+|++..++..+..+.+++... ++....+
T Consensus 324 ~~GqG~n~gi~DA~~La~~La~~l~g-~a--~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (549)
T 2r0c_A 324 SGGFGMNTGIGSAADLGWKLAATLRG-WA--GPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERI 400 (549)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHT-CS--CTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHH
T ss_pred ccCCccccccHHHHHHHHHHHHHHcC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHH
Confidence 99999999999999999999876643 22 467999999999999999999999888887642 4556677
Q ss_pred HHHHHHhhc
Q psy9964 464 GNLGFQLVN 472 (595)
Q Consensus 464 r~~~~~~~~ 472 (595)
|+.+...+.
T Consensus 401 R~~~~~~~~ 409 (549)
T 2r0c_A 401 RAAVAEKLE 409 (549)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666554
No 11
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.96 E-value=5.6e-28 Score=249.01 Aligned_cols=270 Identities=13% Similarity=0.114 Sum_probs=175.5
Q ss_pred ccCcEEEEec-CCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc
Q psy9964 138 IKGTSKVWGH-SSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE 216 (595)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~ 216 (595)
+...+.+++. ++.....++.. ...+.|..|.+.|.+.+ .+++|+++++|++++. ++++++|++.||+
T Consensus 71 ~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~---~~~~v~v~~~~g~ 138 (397)
T 2vou_A 71 PSSSMEYVDALTGERVGSVPAD-------WRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQ---DSETVQMRFSDGT 138 (397)
T ss_dssp CCCEEEEEETTTCCEEEEEECC-------CCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEE---CSSCEEEEETTSC
T ss_pred cccceEEEecCCCCccccccCc-------ccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEe---cCCEEEEEECCCC
Confidence 3345666666 55433333221 13578899999999987 5889999999999986 5678999999999
Q ss_pred EEEecEEEEecCCCchhhhhcCCCCcccCCC-CeEEEEEEEeccCCCC------ceEEEEeCCCCcEEEeeCCCC-----
Q psy9964 217 SIECKLLLGTDGARSQVRNAMNVQYSNWSYD-QKGIVATVKISTSPPN------RTAWQRFTPSGTVALLPLSDE----- 284 (595)
Q Consensus 217 ~~~adlvVgADG~~S~vR~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~p~~~~----- 284 (595)
++++|+||+|||.+|.||+.++ +. ...|. ...+.+.+.....+.. .....++.+++++.++|++++
T Consensus 139 ~~~ad~vV~AdG~~S~vr~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 216 (397)
T 2vou_A 139 KAEANWVIGADGGASVVRKRLL-GI-EPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAES 216 (397)
T ss_dssp EEEESEEEECCCTTCHHHHHHH-CC-CCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSC
T ss_pred EEECCEEEECCCcchhHHHHhc-cC-CCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccc
Confidence 9999999999999999999998 43 33331 1222333331111110 111222346667888888764
Q ss_pred -CeEEEEecCHhh---HHHHhC-CC-------------chHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCC
Q psy9964 285 -FSSLVWATTPEN---AKALLQ-MP-------------GESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGN 346 (595)
Q Consensus 285 -~~~~~~~~~~~~---~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (595)
..+++|..+... ...... .+ .+....++.+.+....+ . +.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~------- 279 (397)
T 2vou_A 217 PRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFK---------P-FRDLVLN------- 279 (397)
T ss_dssp CEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCH---------H-HHHHHHH-------
T ss_pred eeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhCh---------H-HHHHHhc-------
Confidence 345677654322 111100 00 11111222221111000 0 1111110
Q ss_pred cccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChH
Q psy9964 347 EQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPE 426 (595)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~ 426 (595)
. .....+|+....+++|+.|||+|+|||||.|+|++|||+|+||+||..|+++|.. ..+ .+.
T Consensus 280 ----------~--~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~----~~~--~~~ 341 (397)
T 2vou_A 280 ----------A--SSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK----NHD--LRG 341 (397)
T ss_dssp ----------C--SSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH----CSC--HHH
T ss_pred ----------c--CCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc----CCC--HHH
Confidence 0 0112345544467789999999999999999999999999999999999999964 223 578
Q ss_pred HHHHHHHHhhhccchHHHHHHHHHHhhcCC
Q psy9964 427 SLTKYESIRQRENLPVMLSIDLMYRVYRSS 456 (595)
Q Consensus 427 ~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 456 (595)
+|+.|+++|++++..++..++.+.+++..+
T Consensus 342 ~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 342 SLQSWETRQLQQGHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999888754
No 12
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.96 E-value=1.2e-27 Score=260.10 Aligned_cols=292 Identities=19% Similarity=0.220 Sum_probs=189.5
Q ss_pred HHHHhhhcccccCcEEEEecC----CCcce--EEcCCcc-CccccceeeeHHHHHHHHHHHHhcCCc--eEEeCCeEeEE
Q psy9964 128 LKIQILKYVMIKGTSKVWGHS----SDDLL--EFNKAHN-YQDRISYIVENDLIIDAVTKKLNTLNI--DIVYQKKVAHY 198 (595)
Q Consensus 128 l~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~-~~~~~~~~i~R~~L~~~L~~~~~~~gv--~i~~~~~v~~v 198 (595)
+.+++.+.+.+...+.+|+.+ +.... .++.... ......+.++|..|++.|.+.+.+.|+ +|+++++|+++
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l 169 (639)
T 2dkh_A 90 FADSILKEACWINDVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDV 169 (639)
T ss_dssp CHHHHHHHSEEECEEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEE
T ss_pred cHHHHHHhcccccceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEE
Confidence 345555566666677788753 22111 1221111 123445789999999999999998765 99999999999
Q ss_pred ecCCC-CCCceEEEEc------CC--cEEEecEEEEecCCCchhhhhcCCCCcccCCCCeEEEEEEE-eccCCC-CceEE
Q psy9964 199 ELPEQ-PLNNVKIKFE------SG--ESIECKLLLGTDGARSQVRNAMNVQYSNWSYDQKGIVATVK-ISTSPP-NRTAW 267 (595)
Q Consensus 199 ~~~~~-~~~~v~v~~~------dG--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~ 267 (595)
+++++ +..+|+|+++ +| ++++||+||||||.+|.||+.++++.....+...+....+. ....+. .....
T Consensus 170 ~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~ 249 (639)
T 2dkh_A 170 KVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVA 249 (639)
T ss_dssp EECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEE
T ss_pred EECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEE
Confidence 87311 1136888876 46 47999999999999999999999876655544333222221 111111 11111
Q ss_pred EEeCCCCcEEEeeCCCC-CeEEEEecCHh--h-HHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhcccc
Q psy9964 268 QRFTPSGTVALLPLSDE-FSSLVWATTPE--N-AKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLS 343 (595)
Q Consensus 268 ~~~~~~g~~~~~p~~~~-~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (595)
... +.++++++|.+++ ..++++..... . .......+.+.+.+.+.+. +..+
T Consensus 250 ~~~-~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---------------------~~~~--- 304 (639)
T 2dkh_A 250 IQS-EQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRV---------------------LHPY--- 304 (639)
T ss_dssp EEE-TTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHH---------------------HTTS---
T ss_pred EEc-CCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHH---------------------hCcc---
Confidence 122 7788999999888 67777776541 1 0011122333333333221 1100
Q ss_pred CCCcccCCCccceeccccceeeecccccccccc------------CCCEEEEccccccccCccchhhhhchHHHHHHHHH
Q psy9964 344 TGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYI------------GPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQL 411 (595)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~ 411 (595)
...+.. ..++..|++....+++|. .|||+|+|||||.|+|++|||+|+||+||.+|+|+
T Consensus 305 -------~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawk 375 (639)
T 2dkh_A 305 -------KLEVKN--VPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWK 375 (639)
T ss_dssp -------CEEEEE--EEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHH
T ss_pred -------cCccee--eeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHH
Confidence 000111 123445666666677777 89999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCC
Q psy9964 412 SAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSS 456 (595)
Q Consensus 412 L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 456 (595)
|+..+. +.. .+.+|+.|+++|++++..++..++.+.++++..
T Consensus 376 La~vl~-g~a--~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 376 LAAVLR-KQC--APELLHTYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp HHHHHT-TSB--CGGGGHHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred HHHHHc-CCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 987664 333 578999999999999999999999988888754
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=1.1e-27 Score=245.25 Aligned_cols=264 Identities=17% Similarity=0.181 Sum_probs=173.9
Q ss_pred hhhcccccCcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEE
Q psy9964 132 ILKYVMIKGTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIK 211 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~ 211 (595)
+.+.+.+...+.+++. +.....++.. ...++.++|..|.+.|.+.+.+.|++|+++++|++++. ++ +|+
T Consensus 72 ~~~~~~~~~~~~~~~~-g~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-----~~-~v~ 140 (379)
T 3alj_A 72 VLQGSHTPPTYETWMH-NKSVSKETFN----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-----VG-RLT 140 (379)
T ss_dssp HHTTCBCCSCEEEEET-TEEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-----TT-EEE
T ss_pred HHhhCCCccceEEEeC-CceeeeccCC----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-----CC-EEE
Confidence 3344455566777776 5444444332 22468999999999999999989999999999999984 34 888
Q ss_pred EcCCcEEEecEEEEecCCCchhhhhcCCCCcccCCCCeEEEEEEEecc---CCC-CceEEE---EeCCCCcEEEeeCCCC
Q psy9964 212 FESGESIECKLLLGTDGARSQVRNAMNVQYSNWSYDQKGIVATVKIST---SPP-NRTAWQ---RFTPSGTVALLPLSDE 284 (595)
Q Consensus 212 ~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~---~~~~~g~~~~~p~~~~ 284 (595)
+.||+++++|+||+|||.+|.+|+.++.......+....+...++... +.. ...... ++.++++++++|++++
T Consensus 141 ~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (379)
T 3alj_A 141 LQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNEN 220 (379)
T ss_dssp ETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSS
T ss_pred ECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCC
Confidence 999999999999999999999999997643221122233344444321 111 122333 4667888999999998
Q ss_pred CeEEEEecCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceecccccee
Q psy9964 285 FSSLVWATTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAA 364 (595)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (595)
...+++...... ...+.+.+.+.. +.... ..+.++++... ......
T Consensus 221 ~~~~~~~~~~~~------~~~~~l~~~~~~----------~~~~~-~~~~~~l~~~~-----------------~~~~~~ 266 (379)
T 3alj_A 221 ELYLGLMAPAAD------PRGSSVPIDLEV----------WVEMF-PFLEPCLIEAA-----------------KLKTAR 266 (379)
T ss_dssp EEEEEEEECTTC------TTTTCSSCCHHH----------HHHHC-GGGHHHHHHHH-----------------TCTTCC
T ss_pred cEEEEEEecCCC------CCHHHHHHHHhc----------CCchh-ccHHHHHhhCC-----------------ccceEE
Confidence 766666654311 000100000000 00000 00001111100 001112
Q ss_pred eeccc-cccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHH
Q psy9964 365 FPLGF-GHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVM 443 (595)
Q Consensus 365 ~~~~~-~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~ 443 (595)
+++.. ...++|..|||+|+|||||.|+|++|||+|+||+||..|+++|... .+ .+.+|+.|+++|++++..++
T Consensus 267 ~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~----~~--~~~~l~~Y~~~r~~~~~~~~ 340 (379)
T 3alj_A 267 YDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG----SS--VEDALVAWETRIRPITDRCQ 340 (379)
T ss_dssp EEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS----SC--HHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc----cC--HHHHHHHHHHHHHHHHHHHH
Confidence 33322 2367888999999999999999999999999999999999999542 22 47899999999999999998
Q ss_pred HHH
Q psy9964 444 LSI 446 (595)
Q Consensus 444 ~~~ 446 (595)
..+
T Consensus 341 ~~s 343 (379)
T 3alj_A 341 ALS 343 (379)
T ss_dssp HHH
T ss_pred HHh
Confidence 877
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.95 E-value=7.3e-27 Score=241.72 Aligned_cols=279 Identities=14% Similarity=0.096 Sum_probs=172.1
Q ss_pred hhhcccccCcEEEEecCCCcceEEcCCcc-CccccceeeeHHHHHHHHHHHHhc-CC-ceEEeCCeEeEEecCCCCCCce
Q psy9964 132 ILKYVMIKGTSKVWGHSSDDLLEFNKAHN-YQDRISYIVENDLIIDAVTKKLNT-LN-IDIVYQKKVAHYELPEQPLNNV 208 (595)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~R~~L~~~L~~~~~~-~g-v~i~~~~~v~~v~~~~~~~~~v 208 (595)
+.+.+.+...+.+++.++......+.... ......+.++|..|.+.|.+.+.+ .| ++|+++++|++++. +++|
T Consensus 66 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~----~~~v 141 (410)
T 3c96_A 66 LAATAIPTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE----RDGR 141 (410)
T ss_dssp HHHHSEEECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE----ETTE
T ss_pred HHhhCCCcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec----CCcc
Confidence 33444455566677766554433332110 112345889999999999999976 35 68999999999984 4578
Q ss_pred EEEEcC---C--cEEEecEEEEecCCCchhhhhcCCCCcccCCCCeE-EEEEEEeccCCCCceEEEEeC--CCCcEEEee
Q psy9964 209 KIKFES---G--ESIECKLLLGTDGARSQVRNAMNVQYSNWSYDQKG-IVATVKISTSPPNRTAWQRFT--PSGTVALLP 280 (595)
Q Consensus 209 ~v~~~d---G--~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~p 280 (595)
+|++.+ | ++++||+||||||++|.||+.++.......|.... +........ .........+. ++++++++|
T Consensus 142 ~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p 220 (410)
T 3c96_A 142 VLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDR-FLDGKTMIVANDEHWSRLVAYP 220 (410)
T ss_dssp EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESC-CTTSSEEEEEECTTCCEEEEEE
T ss_pred EEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccc-ccCCCeEEEecCCCCcEEEEEe
Confidence 898876 8 48999999999999999999997544333332111 122222222 11222333343 367888999
Q ss_pred CCC-----CCeEEEEecCHhhHHH-----HhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccC
Q psy9964 281 LSD-----EFSSLVWATTPENAKA-----LLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVV 350 (595)
Q Consensus 281 ~~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (595)
+.+ +...+.|......... ......+...+++...+........ .+..++.
T Consensus 221 ~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~i~------------ 281 (410)
T 3c96_A 221 ISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWF-------DIRDLLT------------ 281 (410)
T ss_dssp CCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTB-------CHHHHHH------------
T ss_pred cCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchh-------HHHHHHh------------
Confidence 863 5556666554322111 0000100011122111111000000 0000011
Q ss_pred CCccceeccccceeeeccc-cccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHH
Q psy9964 351 PPRVMSVEEKSRAAFPLGF-GHSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLT 429 (595)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~ 429 (595)
.. .....+|+.. ...++|+.|||+|+|||||.|+|++|||+|+||+||..|+++|... .+ .+.+|+
T Consensus 282 -----~~--~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----~~--~~~~L~ 348 (410)
T 3c96_A 282 -----RN--QLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN----AD--VAAALR 348 (410)
T ss_dssp -----TC--SEEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----SS--HHHHHH
T ss_pred -----cC--cccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----CC--HHHHHH
Confidence 00 1122344432 2467899999999999999999999999999999999999999752 22 578999
Q ss_pred HHHHHhhhccchHHHHHH
Q psy9964 430 KYESIRQRENLPVMLSID 447 (595)
Q Consensus 430 ~Y~~~r~~~~~~~~~~~~ 447 (595)
.|+++|++++..++..++
T Consensus 349 ~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 349 EYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999987776
No 15
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.94 E-value=6.5e-26 Score=240.89 Aligned_cols=265 Identities=15% Similarity=0.152 Sum_probs=182.3
Q ss_pred ccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCC---ceEEEEcCCc--EEEecEEEEecCCCchhhhh
Q psy9964 162 QDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLN---NVKIKFESGE--SIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 162 ~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~---~v~v~~~dG~--~~~adlvVgADG~~S~vR~~ 236 (595)
...++|.++|..|.+.|.+.+.+.|++|+++++|++++. +++ +|++...||+ +++||+||+|||.+|.+|+.
T Consensus 101 ~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~---~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~ 177 (512)
T 3e1t_A 101 PYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF---EGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQA 177 (512)
T ss_dssp TTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE---ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGG
T ss_pred CcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHH
Confidence 456789999999999999999989999999999999986 333 3566667785 89999999999999999999
Q ss_pred cCCCCcccCCCCeEEEEEEEecc---CCCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHH
Q psy9964 237 MNVQYSNWSYDQKGIVATVKIST---SPPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALN 313 (595)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (595)
++.......+...++...+.... .+.....+..+.+.|+++++|+.++..+++|..+....... ....++....+.
T Consensus 178 lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~-~~~~~~~~~~~l 256 (512)
T 3e1t_A 178 VGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEAI-KDGHEAALLRYI 256 (512)
T ss_dssp TCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTTT-SSCHHHHHHHHH
T ss_pred cCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhhh-cCCHHHHHHHHH
Confidence 97654444444456666665321 12233445556688999999999988888888765543221 112222222222
Q ss_pred HhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCc
Q psy9964 314 SEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPL 393 (595)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~ 393 (595)
... + .+...+....+ +...........+.......+|..+||+|||||||.|+|+
T Consensus 257 ~~~-------p-------~~~~~l~~~~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~ 311 (512)
T 3e1t_A 257 DRC-------P-------IIKEYLAPATR-----------VTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPV 311 (512)
T ss_dssp HTS-------H-------HHHHHHTTCEE-----------CCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCST
T ss_pred HhC-------c-------hHHHHHhcCcc-----------ccccccccceeeccccccccccccCCEEEEechhhcCCCc
Confidence 210 0 01111111000 0000000000111111135677889999999999999999
Q ss_pred cchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCc
Q psy9964 394 AGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSL 457 (595)
Q Consensus 394 ~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~ 457 (595)
.|||+|+|++||..|+++|...+..+.+ .+.+|+.|++.|+++...+......++.+....+
T Consensus 312 ~GqG~~~Al~dA~~La~~L~~~l~~~~~--~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~d 373 (512)
T 3e1t_A 312 FSSGVHLATYSALLVARAINTCLAGEMS--EQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTD 373 (512)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTTTCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred cccCHHHHHHHHHHHHHHHHHHHcCCcc--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999999999877654333 5689999999999999999999888888775443
No 16
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=4e-26 Score=235.21 Aligned_cols=290 Identities=16% Similarity=0.121 Sum_probs=175.2
Q ss_pred HhhhcccccCcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEE
Q psy9964 131 QILKYVMIKGTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKI 210 (595)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v 210 (595)
++.+...+... .+++.++.....+.... ........++|..|.+.|.+.+.+ ++|+++++|++++. ++++++|
T Consensus 89 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~---~~~~v~v 161 (398)
T 2xdo_A 89 TYYDLALPMGV-NIADEKGNILSTKNVKP-ENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEP---GKKKWTL 161 (398)
T ss_dssp HHHHHCBCCCE-EEECSSSEEEEECCCGG-GTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEE---CSSSEEE
T ss_pred HHHHhhcccce-EEECCCCCchhhccccc-cCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEE---CCCEEEE
Confidence 33333444444 66766554433321011 011233579999999999998853 68999999999986 4568999
Q ss_pred EEcCCcEEEecEEEEecCCCchhhhhcCCCCcccCCC-CeEEEEEEEecc---CC----CCceEEEEeCCCCcEEEeeCC
Q psy9964 211 KFESGESIECKLLLGTDGARSQVRNAMNVQYSNWSYD-QKGIVATVKIST---SP----PNRTAWQRFTPSGTVALLPLS 282 (595)
Q Consensus 211 ~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~-~~~~~~~~~~~~---~~----~~~~~~~~~~~~g~~~~~p~~ 282 (595)
++.||+++++|+||+|||.+|.||+.++.. ...|. ..++...+.... +. .....+..+.++..++.+|.+
T Consensus 162 ~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 239 (398)
T 2xdo_A 162 TFENKPSETADLVILANGGMSKVRKFVTDT--EVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNN 239 (398)
T ss_dssp EETTSCCEEESEEEECSCTTCSCCTTTCCC--CCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEE
T ss_pred EECCCcEEecCEEEECCCcchhHHhhccCC--CceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCC
Confidence 999999999999999999999999998642 22231 122223332110 00 011122234455566677887
Q ss_pred CCCeEEEEecCHhh-HHH---HhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceec
Q psy9964 283 DEFSSLVWATTPEN-AKA---LLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVE 358 (595)
Q Consensus 283 ~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (595)
++..++++.+.... ... ....+.+.+.+.+.+.+....+ .+.+++.. ...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~-----------~~~~---- 294 (398)
T 2xdo_A 240 NGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDE----------RYKELIHT-----------TLSF---- 294 (398)
T ss_dssp TTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCH----------HHHHHHHH-----------CSCC----
T ss_pred CCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCCh----------HHHHHHhC-----------cccc----
Confidence 77666665542211 100 0112334445555544432111 11111110 0000
Q ss_pred cccceeeeccccccccccC-C--CEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHh
Q psy9964 359 EKSRAAFPLGFGHSVRYIG-P--GCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIR 435 (595)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~-g--rvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r 435 (595)
..+..+.+. ...+|.. + ||+|+|||||.|+|++|||+|+||+||..|+++|... +.++ .+.+|+.|+++|
T Consensus 295 -~~~~~~~~~--~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~-~~~~L~~Y~~~r 367 (398)
T 2xdo_A 295 -VGLATRIFP--LEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG---KFNS-IEEAVKNYEQQM 367 (398)
T ss_dssp -EEEEEEECC--CCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC---CSSS-HHHHHHHHHHHH
T ss_pred -eeeeeEecc--CCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc---cCch-HHHHHHHHHHHH
Confidence 011112211 1246654 5 9999999999999999999999999999999999753 1111 368999999999
Q ss_pred hhccchHHHHHHHHH-HhhcCCchHHH
Q psy9964 436 QRENLPVMLSIDLMY-RVYRSSLTPVK 461 (595)
Q Consensus 436 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ 461 (595)
++++..++..+.... .+|+.+.++..
T Consensus 368 ~~~~~~~~~~s~~~~~~~~~~~~~~~~ 394 (398)
T 2xdo_A 368 FIYGKEAQEESTQNEIEMFKPDFTFQQ 394 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCC--
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccccc
Confidence 999999998887665 46666655443
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.94 E-value=5.7e-25 Score=226.73 Aligned_cols=272 Identities=13% Similarity=0.177 Sum_probs=174.8
Q ss_pred CcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEE-cCCc-
Q psy9964 140 GTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKF-ESGE- 216 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~-~dG~- 216 (595)
.++.++..++.....+.... .....+|.++|..|++.|.+.+.+.|++++++++|+++.. +++.+ .+.. .+|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~---~~~~~~~v~~~~~~~~ 146 (397)
T 3oz2_A 71 KGARIYGPSEKRPIILQSEK-AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK---ENGKVAGAKIRHNNEI 146 (397)
T ss_dssp SEEEEECTTCSSCEEEECSS-SSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE---ETTEEEEEEEEETTEE
T ss_pred ceEEEEeCCCceEeeccccc-cCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee---ccceeeeeeecccccc
Confidence 45667777666555555443 3467789999999999999999999999999999999986 23333 3333 2333
Q ss_pred -EEEecEEEEecCCCchhhhhcCCCCcccCCCCeEEEEEEEeccCCC-CceEEEEe---CCCCcEEEeeCCCCCeEEEEe
Q psy9964 217 -SIECKLLLGTDGARSQVRNAMNVQYSNWSYDQKGIVATVKISTSPP-NRTAWQRF---TPSGTVALLPLSDEFSSLVWA 291 (595)
Q Consensus 217 -~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~g~~~~~p~~~~~~~~~~~ 291 (595)
+++||+||||||++|.||+.++.......+........+....... ......++ .+.++.+++|.+++..++.+.
T Consensus 147 ~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~ 226 (397)
T 3oz2_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIG 226 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEe
Confidence 7999999999999999999998765555544344333333322221 12222222 356788889988887777665
Q ss_pred cCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccc
Q psy9964 292 TTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGH 371 (595)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (595)
......... ...+.+.+.+.+.+ + . +.. . ..+. ......|+. ..
T Consensus 227 ~~~~~~~~~--~~~~~~l~~~~~~~----~-------------~-l~~-----------~---~~~~-~~~~~~~~~-~~ 270 (397)
T 3oz2_A 227 SSINWIHNR--FELKNYLDRFIENH----P-------------G-LKK-----------G---QDIQ-LVTGGVSVS-KV 270 (397)
T ss_dssp EETTTSCSH--HHHHHHHHHHHHTC----H-------------H-HHT-----------S---EEEE-EEEEEEECC-CC
T ss_pred eccchhhhh--hhHHHHHHHHHHhC----c-------------c-ccc-----------c---ceee-eeecccccc-Cc
Confidence 433210000 00011111111100 0 0 000 0 0000 011112221 12
Q ss_pred cccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHH
Q psy9964 372 SVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYR 451 (595)
Q Consensus 372 ~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~ 451 (595)
..+|+.+||+|+|||||.++|++|||+|+||+||..||++|.+++..++. ++++|+.|++.++++..+..........
T Consensus 271 ~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~--~~~~L~~Ye~~~~~~~~~~~~~~~~~~~ 348 (397)
T 3oz2_A 271 KMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQMMQKYEKLIKERFERKHLRNWVAKE 348 (397)
T ss_dssp CSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999999999999999999999999999999998887765 6899999999988877665554444444
Q ss_pred hh
Q psy9964 452 VY 453 (595)
Q Consensus 452 ~~ 453 (595)
.+
T Consensus 349 ~~ 350 (397)
T 3oz2_A 349 KL 350 (397)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 18
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.93 E-value=1.1e-24 Score=224.82 Aligned_cols=273 Identities=12% Similarity=0.115 Sum_probs=182.9
Q ss_pred CcEEEEecCCCcceEEcCCccCccccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEc---CC
Q psy9964 140 GTSKVWGHSSDDLLEFNKAHNYQDRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFE---SG 215 (595)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~---dG 215 (595)
.++.+++.++...+.++... ...+.++.++|..|.+.|.+.+.+.|++|+++++|++++. +++.++ |++. ++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~---~~~~v~gv~~~~~~~~ 146 (397)
T 3cgv_A 71 KGARIYGPSEKRPIILQSEK-AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK---ENGKVAGAKIRHNNEI 146 (397)
T ss_dssp SEEEEECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE---ETTEEEEEEEEETTEE
T ss_pred ceEEEEcCCCCEEEEEeccc-cCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEE---eCCEEEEEEEEECCeE
Confidence 45667776655435555543 2356789999999999999999989999999999999986 355565 7663 55
Q ss_pred cEEEecEEEEecCCCchhhhhcCCCC-cccC-CCCeEEEEEEEeccCCCCceEEEEe---CCCCcEEEeeCCCCCeEEEE
Q psy9964 216 ESIECKLLLGTDGARSQVRNAMNVQY-SNWS-YDQKGIVATVKISTSPPNRTAWQRF---TPSGTVALLPLSDEFSSLVW 290 (595)
Q Consensus 216 ~~~~adlvVgADG~~S~vR~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~p~~~~~~~~~~ 290 (595)
++++||+||+|||.+|.+|+.++.+. .... ....++...+.....+ .......+ .+.++++++|.+++..++.+
T Consensus 147 ~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~ 225 (397)
T 3cgv_A 147 VDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGI 225 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEETTEEEEEE
T ss_pred EEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECCCCeEEEEE
Confidence 68999999999999999999998765 2211 1112222222221211 22222222 46788999999998877777
Q ss_pred ecCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeecccc
Q psy9964 291 ATTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFG 370 (595)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (595)
....... .......+.+... +... ..+. ...+.......+|+. .
T Consensus 226 ~~~~~~~-----~~~~~~~~~l~~~-----------------~~~~-~~~~------------~~~~~~~~~~~~p~~-~ 269 (397)
T 3cgv_A 226 GSSINWI-----HNRFELKNYLDRF-----------------IENH-PGLK------------KGQDIQLVTGGVSVS-K 269 (397)
T ss_dssp EEETTTC-----SCHHHHHHHHHHH-----------------HHTC-HHHH------------TSEEEEEEEEEEECC-C
T ss_pred Eeccccc-----cCCCCHHHHHHHH-----------------HHhC-cCCC------------CCeEEeeeeeeeecC-C
Confidence 7654321 0111111111110 0000 0000 000111123344553 3
Q ss_pred ccccccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHH
Q psy9964 371 HSVRYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMY 450 (595)
Q Consensus 371 ~~~~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~ 450 (595)
..++|..+|++|+|||||.++|++|||+|+|++||..|+++|.+....+.. .+.+|+.|++.|+++..+.+..++.+.
T Consensus 270 ~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~~ 347 (397)
T 3cgv_A 270 VKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQMMQKYEKLIKERFERKHLRNWVAK 347 (397)
T ss_dssp CCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999999999999999999999887766554 678999999999999999999998888
Q ss_pred HhhcC
Q psy9964 451 RVYRS 455 (595)
Q Consensus 451 ~~~~~ 455 (595)
+++..
T Consensus 348 ~~~~~ 352 (397)
T 3cgv_A 348 EKLAM 352 (397)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 87654
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.93 E-value=1.3e-24 Score=227.59 Aligned_cols=248 Identities=14% Similarity=0.095 Sum_probs=169.4
Q ss_pred cceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEc---CCc--EEEecEEEEecCCCchhhhhcC
Q psy9964 165 ISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFE---SGE--SIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 165 ~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~---dG~--~~~adlvVgADG~~S~vR~~l~ 238 (595)
.++.++|..|++.|.+.+.+.|++|+++++|++++. +++.+. |++. ||+ +++||+||+|||.+|.+|+.++
T Consensus 93 ~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~---~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 93 EGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF---EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp EEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE---ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred CcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE---ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 478999999999999999889999999999999986 344543 5554 776 8999999999999999999997
Q ss_pred CCCc--ccCCC---CeEEEEEEEeccCCCC-ceEEEEe----CCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCc-hH
Q psy9964 239 VQYS--NWSYD---QKGIVATVKISTSPPN-RTAWQRF----TPSGTVALLPLSDEFSSLVWATTPENAKALLQMPG-ES 307 (595)
Q Consensus 239 ~~~~--~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~----~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 307 (595)
...+ ...+. ..++...+....+... .....++ .++++++++|.+++..++.+...... ...+. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~----~~~~~~~~ 245 (453)
T 3atr_A 170 PELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGM----GYPSIHEY 245 (453)
T ss_dssp TTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSS----CCCCHHHH
T ss_pred CCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCC----CCCCHHHH
Confidence 6542 11111 2333444444432211 2221223 25788999999888777776654221 00111 11
Q ss_pred HHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEcccc
Q psy9964 308 FVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSA 387 (595)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAA 387 (595)
+.+.+.. +...+... .+.. ......|. ....++|+.+|++|+||||
T Consensus 246 ~~~~l~~---------------------~~~~~~~~---------~~~~---~~~~~~p~-~~~~~~~~~~~v~lvGDAA 291 (453)
T 3atr_A 246 YKKYLDK---------------------YAPDVDKS---------KLLV---KGGALVPT-RRPLYTMAWNGIIVIGDSG 291 (453)
T ss_dssp HHHHHHH---------------------HCTTEEEE---------EEEE---EEEEEEEC-SSCCSCSEETTEEECGGGG
T ss_pred HHHHHHh---------------------hhhhcCCC---------eEEe---ccceeccC-CCCCCceecCCEEEEeCcc
Confidence 2111111 00101000 0000 01112333 3456788899999999999
Q ss_pred ccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcC
Q psy9964 388 HRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRS 455 (595)
Q Consensus 388 H~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 455 (595)
|.++|++|||+|+||+||..||++|.+++..++. .+++|+.|+++|++++...+..++.+.+++..
T Consensus 292 h~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~--~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 292 FTVNPVHGGGKGSAMISGYCAAKAILSAFETGDF--SASGLWDMNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp TCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--STTTTTHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred cCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887654433 46799999999999999999999888887653
No 20
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.92 E-value=1.1e-24 Score=233.16 Aligned_cols=261 Identities=13% Similarity=0.131 Sum_probs=184.7
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc-CC--cEEEecEEEEecCCCchhhhhcCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE-SG--ESIECKLLLGTDGARSQVRNAMNV 239 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~-dG--~~~~adlvVgADG~~S~vR~~l~~ 239 (595)
.+.++.++|..|.+.|.+.+.+.|++++++++|++++. ++++.+.|++. +| ++++||+||+|||.+|.+|+.++.
T Consensus 119 ~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~--~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~ 196 (591)
T 3i3l_A 119 FDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDL--SDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGV 196 (591)
T ss_dssp CSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEC--CSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTC
T ss_pred cCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCC
Confidence 45688999999999999999989999999999999986 24567888887 77 589999999999999999999987
Q ss_pred CCcccCCCCeEEEEEEEecc---CCCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHHHhc
Q psy9964 240 QYSNWSYDQKGIVATVKIST---SPPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALNSEF 316 (595)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (595)
......+...++...+.... .+.....+..+.+.|+++.+|+.++..++.|..+.+....+...+.+.+.+.+...+
T Consensus 197 ~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 276 (591)
T 3i3l_A 197 RQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKC 276 (591)
T ss_dssp EEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTC
T ss_pred CCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhC
Confidence 64433343344444444321 122344555566889999999999888888887665543333333444444333211
Q ss_pred CCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccch
Q psy9964 317 NKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQ 396 (595)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~Gq 396 (595)
+ .+...+....+ + ......+......++|..+|++|||||||.++|+.||
T Consensus 277 p--------------~l~~~l~~~~~-----------~-----~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 277 A--------------KAMDILGGAEQ-----------V-----DEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp H--------------HHHHHHTTCEE-----------C-----SCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCC
T ss_pred H--------------HHHHHHhcCcc-----------c-----cCceEecccccchhhcccCCEEEEccccccCCCcccc
Confidence 0 01111111000 0 0011111112235678899999999999999999999
Q ss_pred hhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHH--HhhcCCc
Q psy9964 397 GVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMY--RVYRSSL 457 (595)
Q Consensus 397 G~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~--~~~~~~~ 457 (595)
|+|+|++||..|+++|...+..+.. .+.+++.|++.++++...+......++ ......+
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~~~--~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~d 387 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHGDE--KDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPD 387 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 9999999999999999887665433 467899999999999999999988887 4444433
No 21
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.92 E-value=7.5e-25 Score=224.23 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=157.1
Q ss_pred cceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcCCCCccc
Q psy9964 165 ISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMNVQYSNW 244 (595)
Q Consensus 165 ~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~ 244 (595)
..+.++|.+|.+.|.+.+.+.|++|+++++|++++. . +++++|+||+|||.+|. |+.+.... ..
T Consensus 91 ~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~---~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~-g~ 154 (381)
T 3c4a_A 91 LLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE---L-----------PLADYDLVVLANGVNHK-TAHFTEAL-VP 154 (381)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG---C-----------CGGGCSEEEECCGGGGG-TCCSSGGG-CC
T ss_pred ceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh---c-----------ccccCCEEEECCCCCch-HHhhhhhc-CC
Confidence 457899999999999999888999999999999974 1 12589999999999999 99873211 11
Q ss_pred CCC-CeEEEEEEEeccCCCCceEEEEeCCCCcEE--EeeCCCCCeEEEEecCHhhHH--HHhCCCchHHHHHHHHhcCCC
Q psy9964 245 SYD-QKGIVATVKISTSPPNRTAWQRFTPSGTVA--LLPLSDEFSSLVWATTPENAK--ALLQMPGESFVDALNSEFNKP 319 (595)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 319 (595)
.+. ..+................+..+.+.|+++ ++|++++...+++..+.+... .+...+.+.+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------- 227 (381)
T 3c4a_A 155 QVDYGRNKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYV------- 227 (381)
T ss_dssp CCEEEEEEEEEEEESSCCSSEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHH-------
T ss_pred CcccCCccEEEEecCCCCCcceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHH-------
Confidence 111 012222222221111112222233566543 689988776544443322110 00111222222222
Q ss_pred cchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeec-cccccccccCCCEEEEccccccccCccchhh
Q psy9964 320 AELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPL-GFGHSVRYIGPGCALLGDSAHRIHPLAGQGV 398 (595)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~grvvLvGDAAH~~~P~~GqG~ 398 (595)
.+.+..+.+.. .+ +... . ..|++ .....++|+.|||+|+|||||+|+|++|||+
T Consensus 228 --------------~~~~~~~~~~~----~l---~~~~--~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~ 282 (381)
T 3c4a_A 228 --------------AKVFQAELGGH----GL---VSQP--G--LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGT 282 (381)
T ss_dssp --------------HHHTHHHHTTC----CC---BCCT--T--TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHH
T ss_pred --------------HHHhcccCCCc----hh---hcCC--C--cceeeeccccCCCcccCCEEEEEccccccCCCccccH
Confidence 22233222211 00 0000 0 01222 1234678999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCC-----chHHHHHHHHHHHh
Q psy9964 399 NLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSS-----LTPVKILGNLGFQL 470 (595)
Q Consensus 399 n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~ 470 (595)
|+||+||..|+++|... .+ .+.+|+.|+++|++++..++..++.+.+++... .++....|+..++.
T Consensus 283 ~~al~Da~~La~~L~~~----~~--~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 283 TMAVVVAQLLVKALCTE----DG--VPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHHHHHHHHHHHHHHHS----SS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHhcc----cc--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhcc
Confidence 99999999999999763 22 578999999999999999999999888554332 14455667666654
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.91 E-value=8e-23 Score=212.47 Aligned_cols=280 Identities=11% Similarity=0.100 Sum_probs=183.9
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc--eEEEEcCCc--EEEecEEEEecCCCchhhhhcC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN--VKIKFESGE--SIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~--v~v~~~dG~--~~~adlvVgADG~~S~vR~~l~ 238 (595)
...++.++|..|.+.|.+.+.+.|++|+++++|++++. ++++ +.|+..+|+ +++||+||+|||.+|.+|+.++
T Consensus 97 ~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~---~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 97 WNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKF---FGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp CCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEE---ETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred CCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 55789999999999999999888999999999999986 2334 566668898 7999999999999999999998
Q ss_pred CCCcccCCCCeEEEEEEEeccCCC----CceEE--EEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHH
Q psy9964 239 VQYSNWSYDQKGIVATVKISTSPP----NRTAW--QRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDAL 312 (595)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (595)
.+.....+....+...+....+.. ..... ....+.++++++|.+++..++.+..+.+..... ..+.+++...+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~~-~~~~~~~l~~~ 252 (421)
T 3nix_A 174 LDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDEY-TGTPEERMRAM 252 (421)
T ss_dssp CEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTTS-CSCHHHHHHHH
T ss_pred CCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhhc-CCCHHHHHHHH
Confidence 776555555566666655432111 11111 112367789999999998888888776543211 12333444433
Q ss_pred HHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccC
Q psy9964 313 NSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHP 392 (595)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P 392 (595)
...++. +...+.... .......++......++|..++++|+|||||.++|
T Consensus 253 ~~~~p~--------------~~~~l~~~~----------------~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P 302 (421)
T 3nix_A 253 IANEGH--------------IAERFKSEE----------------FLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDP 302 (421)
T ss_dssp HHTCTT--------------THHHHTTCC----------------BSSCCEEEECCCBEESCSEETTEEECGGGTCBCCS
T ss_pred HHhCcH--------------HHHHHhcCc----------------cccCceeecccceeeeeeccCCEEEecccccccCC
Confidence 332111 111111100 00112233433345667888999999999999999
Q ss_pred ccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCCchHHHHHHHHHHHhhc
Q psy9964 393 LAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSSLTPVKILGNLGFQLVN 472 (595)
Q Consensus 393 ~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 472 (595)
+.|||+|+|++||..|+++|.+....+. ...++.|++.++............ ++.. .+.+. +....
T Consensus 303 ~~G~G~~~A~~~a~~la~~l~~~~~~~~----~~~~~~y~~~~~~~~~~~~~~~~~---~~~~------~~~~~-~~~~~ 368 (421)
T 3nix_A 303 IFSSGATFAMESGSKGGKLAVQFLKGEE----VNWEKDFVEHMMQGIDTFRSFVTG---WYDG------TLHAV-FFAKN 368 (421)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHTTCC----CCHHHHTHHHHHHHHHHHHHHHHH---HHHS------HHHHH-HTCSS
T ss_pred cccccHHHHHHHHHHHHHHHHHHhcCCc----hhHHHHHHHHHHHHHHHHHHHHHH---Hcch------hhhhh-hhCcC
Confidence 9999999999999999999988765432 247888998887655544433222 2211 12222 22234
Q ss_pred cChhHHHHHHHHHHHHhh
Q psy9964 473 AVRPIKSILCDIFMRTSM 490 (595)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ 490 (595)
..|.+++.+...+.|...
T Consensus 369 ~~~~~~~~i~~~l~g~~~ 386 (421)
T 3nix_A 369 PDPDHKRMICSVLAGYVW 386 (421)
T ss_dssp CCHHHHHHHHHHHTTCTT
T ss_pred CChhHHHHHHHHhhhhhc
Confidence 456677777776665533
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.88 E-value=4.8e-22 Score=213.44 Aligned_cols=254 Identities=13% Similarity=0.112 Sum_probs=159.7
Q ss_pred cceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEc------CC---------cEEEecEEEEecC
Q psy9964 165 ISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFE------SG---------ESIECKLLLGTDG 228 (595)
Q Consensus 165 ~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~------dG---------~~~~adlvVgADG 228 (595)
.+|.++|..|.+.|.+.+++.|++|+++++|+++..+ +++.|. |++. || .+++||+||+|||
T Consensus 137 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~--~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG 214 (584)
T 2gmh_A 137 GNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFH--EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEG 214 (584)
T ss_dssp TCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEEC--TTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCC
T ss_pred CCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeC
Confidence 4789999999999999999899999999999999862 233443 7765 34 6899999999999
Q ss_pred CCchhhhhc----CCCCcccCCCCeE--EEEEEEeccC-CCCceEEEEeC------CCCcEEEeeCC--CCCeEEEEecC
Q psy9964 229 ARSQVRNAM----NVQYSNWSYDQKG--IVATVKISTS-PPNRTAWQRFT------PSGTVALLPLS--DEFSSLVWATT 293 (595)
Q Consensus 229 ~~S~vR~~l----~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~------~~g~~~~~p~~--~~~~~~~~~~~ 293 (595)
.+|.+|+.+ ++.... .+...+ +...+.++.. .........+. ..+..+++|.. ++..+++|...
T Consensus 215 ~~S~vr~~l~~~~gl~~~~-~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~ 293 (584)
T 2gmh_A 215 CHGHLAKQLYKKFDLRANC-EPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVG 293 (584)
T ss_dssp TTCHHHHHHHHHTTTTTTS-CCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEE
T ss_pred CCchHHHHHHHHhCCCCCC-CchhHHhhhhhheecCcccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEe
Confidence 999999987 544221 111222 2223333321 11222222211 12335667877 67777777654
Q ss_pred HhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccc
Q psy9964 294 PENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSV 373 (595)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (595)
...... ..++. +.+.+ +... ..+..+++. . ..+....+..++......+
T Consensus 294 ~~~~~~--~~~~~---~~l~~-~~~~-----------p~i~~~l~~-----------~---~~~~~~~~~~~~~~~~~~~ 342 (584)
T 2gmh_A 294 LDYQNP--YLSPF---REFQR-WKHH-----------PSIKPTLEG-----------G---KRIAYGARALNEGGFQSIP 342 (584)
T ss_dssp TTCCCT--TCCHH---HHHHH-HTTS-----------TTTHHHHTT-----------C---EEEEEEEEEEECCGGGGCC
T ss_pred cCcccc--cCChH---HHHHH-HHhC-----------hHHHHHhCC-----------C---eEEEecceEccCCCcccCC
Confidence 322100 01111 11111 1110 011111210 0 0011111222333344567
Q ss_pred cccCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhCCC-CCCChHH---HHHHHHHhhhc-cchHHHHHHH
Q psy9964 374 RYIGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGY-PIGHPES---LTKYESIRQRE-NLPVMLSIDL 448 (595)
Q Consensus 374 ~~~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~-~~~~~~~---L~~Y~~~r~~~-~~~~~~~~~~ 448 (595)
+|+.+|++|+|||||.|+|+.|||+|+||+||..||++|..++..+. . .+++ |+.|+++|+++ +.+.+..++.
T Consensus 343 ~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~--~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~ 420 (584)
T 2gmh_A 343 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQ--SKTIGLHVTEYEDNLKNSWVWKELYSVRN 420 (584)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCC--CSSSSCCCTHHHHHHHTSHHHHHHHHTTT
T ss_pred ccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcc--hhhhhhhHHHHHHHHHHhHHHHHHHHHhC
Confidence 88999999999999999999999999999999999999988775443 2 2344 99999999988 6777777766
Q ss_pred HHHhhc
Q psy9964 449 MYRVYR 454 (595)
Q Consensus 449 ~~~~~~ 454 (595)
+..+|.
T Consensus 421 ~~~~~~ 426 (584)
T 2gmh_A 421 IRPSCH 426 (584)
T ss_dssp TTGGGG
T ss_pred hhHHHH
Confidence 666654
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.88 E-value=3.8e-21 Score=204.62 Aligned_cols=242 Identities=14% Similarity=0.098 Sum_probs=162.1
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhh-hcCCCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRN-AMNVQY 241 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~-~l~~~~ 241 (595)
..+++.++|..|.+.|.+.+.+.|++++++ +|++++.+ ++...+.|++.+|++++||+||+|||.+|.+|+ .++.+.
T Consensus 164 ~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~ 241 (511)
T 2weu_A 164 FPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQD-ERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRF 241 (511)
T ss_dssp CSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCE
T ss_pred CCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCC
Confidence 456789999999999999999899999999 99999862 112237888999989999999999999999954 556543
Q ss_pred cc---cCCCCeEEEEEEEeccCC-CCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHHHhcC
Q psy9964 242 SN---WSYDQKGIVATVKISTSP-PNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALNSEFN 317 (595)
Q Consensus 242 ~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (595)
.. ..+...++...+....+. ........+.+.|+++++|..+ ...+.+..... ..+.++..+.+.+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~------~~~~~~~~~~l~~~~~ 314 (511)
T 2weu_A 242 QSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE------FISPEEAERELRSTVA 314 (511)
T ss_dssp EECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT------TSCHHHHHHHHHHHHC
T ss_pred ccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC------CCCHHHHHHHHHHHhC
Confidence 22 112223443344433221 1222233455778999999987 34444433211 1122233333322221
Q ss_pred CCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccchh
Q psy9964 318 KPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQG 397 (595)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~GqG 397 (595)
. .|. + .....+++.....++|..+||+|||||||.++|+.|||
T Consensus 315 ~----------------------~~~----------~-----~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G 357 (511)
T 2weu_A 315 P----------------------GRD----------D-----LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTG 357 (511)
T ss_dssp T----------------------TCT----------T-----SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCH
T ss_pred c----------------------ccc----------c-----ccceeEEeeccccccccCCCEEEEechhhccCcccccc
Confidence 0 000 0 00111233223355667899999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcCC
Q psy9964 398 VNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRSS 456 (595)
Q Consensus 398 ~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~ 456 (595)
+|+|++||..|+++|.. +.. .+.+|+.|++.|+++...+.........+....
T Consensus 358 ~~~a~~da~~La~~l~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~ 410 (511)
T 2weu_A 358 IFFIQHAIEQLVKHFPG----ERW--DPVLISAYNERMAHMVDGVKEFLVLHYKGAQRE 410 (511)
T ss_dssp HHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHhcc----CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 99999999999998852 222 578999999999999998888877777765443
No 25
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.86 E-value=3.5e-21 Score=205.14 Aligned_cols=244 Identities=14% Similarity=0.148 Sum_probs=159.0
Q ss_pred cccceeeeHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh-hhhcCCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV-RNAMNVQ 240 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v-R~~l~~~ 240 (595)
...++.++|..|.+.|.+.+.+ .|++++++ +|++++.. ++...+.|++.+|++++||+||+|||.+|.+ |+.++.+
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINN-QHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEec-CCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 3467899999999999999998 89999999 69999862 1122357888898889999999999999999 6777765
Q ss_pred CcccC--C-CCeEEEEEEEecc--CCCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHHHh
Q psy9964 241 YSNWS--Y-DQKGIVATVKIST--SPPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALNSE 315 (595)
Q Consensus 241 ~~~~~--~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (595)
..... + ...++........ ..........+.+.|+++.+|++++. .+.+.+.... .+.+...+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~~------~~~~~~~~~l~~~ 316 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSSH------TNDIDAQKTLFNY 316 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTTT------CCHHHHHHHHHHH
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCCC------CChHHHHHHHHHH
Confidence 42211 1 1234443444332 11112222234577889999998753 3334333211 1122222222222
Q ss_pred cCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccc
Q psy9964 316 FNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAG 395 (595)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~G 395 (595)
+.... ..+. . .....+++.....++|..|||+|+|||||.++|+.|
T Consensus 317 l~~~~--------------~~l~-----------------~---~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~G 362 (526)
T 2pyx_A 317 LGVDG--------------AAAD-----------------K---LEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEA 362 (526)
T ss_dssp HTCCH--------------HHHH-----------------H---CCCEEEECCCEEESCSEETTEEECGGGTEECCCTTC
T ss_pred HHhcC--------------cccc-----------------c---CCceEEecccCccccccCCCEEEEEhhhcccCcccc
Confidence 21100 0000 0 011123443344667778999999999999999999
Q ss_pred hhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhc
Q psy9964 396 QGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYR 454 (595)
Q Consensus 396 qG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~ 454 (595)
||+|+|++||..|+++|... +.. .+.+|+.|+++|+++...+............
T Consensus 363 qGi~~ai~da~~La~~L~~~---~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~ 416 (526)
T 2pyx_A 363 SALALIEWTASTLAQQLPPN---RMV--MDTISARVNERYQQHWQQIIDFLKLHYVISQ 416 (526)
T ss_dssp HHHHHHHHHHHHHHHTCCSC---HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHHHhhhc---CCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988521 111 3679999999999999888876666665533
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.85 E-value=2.4e-20 Score=199.35 Aligned_cols=237 Identities=12% Similarity=0.115 Sum_probs=156.5
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhh-hcCCCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRN-AMNVQY 241 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~-~l~~~~ 241 (595)
.++++.++|..|.+.|.+.+.+.|++++++ +|++++.. +++..+.|++.+|++++||+||+|||.+|.+|+ .++...
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~ 233 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLN-NRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPF 233 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCE
T ss_pred CCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEc-CCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCc
Confidence 456789999999999999998899999999 89999862 112236788999989999999999999999965 445543
Q ss_pred cccC---CCCeEEEEEEEeccC--CCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHHHhc
Q psy9964 242 SNWS---YDQKGIVATVKISTS--PPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALNSEF 316 (595)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (595)
.... ....++...+....+ .........+.+.|+++++|++++ ..+.+..... ..+.+...+.+.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~------~~~~~~~~~~l~~~~ 306 (538)
T 2aqj_A 234 IDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH------FTSRDQATADFLKLW 306 (538)
T ss_dssp EECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT------TSCHHHHHHHHHHHH
T ss_pred cccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC------CCChHHHHHHHHHHh
Confidence 2221 112333333332211 011112223557788999999874 3344433211 112222223332221
Q ss_pred CCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCccch
Q psy9964 317 NKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLAGQ 396 (595)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~Gq 396 (595)
.. .| + .....+++.....++|..|||+|+|||||.++|+.||
T Consensus 307 ~~----------------------~~-------~---------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gq 348 (538)
T 2aqj_A 307 GL----------------------SD-------N---------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLEST 348 (538)
T ss_dssp TC----------------------CT-------T---------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSC
T ss_pred cC----------------------CC-------C---------CCceEEeeccccccccccCCEEEEcccccccCcchhc
Confidence 11 00 0 0011233333345677789999999999999999999
Q ss_pred hhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHh
Q psy9964 397 GVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRV 452 (595)
Q Consensus 397 G~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~ 452 (595)
|+|+|++||..|+++|.. +.. .+.+|+.|+++|+++...+..........
T Consensus 349 G~~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 349 GIYFIYAALYQLVKHFPD----TSF--DPRLSDAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp HHHHHHHHHHHHHHTCCB----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhhc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999988742 222 57899999999999988877766655544
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.85 E-value=8.2e-20 Score=195.44 Aligned_cols=240 Identities=13% Similarity=0.149 Sum_probs=158.5
Q ss_pred cccceeeeHHHHHHHHHHHHhcC-CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh-hhhcCCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTL-NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV-RNAMNVQ 240 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~-gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v-R~~l~~~ 240 (595)
..+++.++|..|.+.|.+.+.+. |++++++ +|++++.. ++...+.|++.+|++++||+||+|||.+|.+ ++.++..
T Consensus 185 ~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~-~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 185 TNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRD-ANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 34578999999999999999886 9999999 99999862 1122378889999999999999999999999 5666654
Q ss_pred CcccC---CCCeEEEEEEEeccC---CCCceEEEEeCCCCcEEEeeCCCCCeEEEEecCHhhHHHHhCCCchHHHHHHHH
Q psy9964 241 YSNWS---YDQKGIVATVKISTS---PPNRTAWQRFTPSGTVALLPLSDEFSSLVWATTPENAKALLQMPGESFVDALNS 314 (595)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (595)
..... .....+........+ ..... .....+.++++++|+++. ..+.+..... ..+.++..+.+.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ipl~~~-~~~g~v~~~~------~~~~~~~~~~l~~ 334 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPFT-SAIAMKSGWTWKIPMLGR-FGTGYVYSSR------FATEDEAVREFCE 334 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSE-EEEECSSEEEEEEECSSE-EEEEEEECTT------TSCHHHHHHHHHH
T ss_pred cccccccccccceEEEeecccCCcccCCCce-eeeecCCceEEEccCCCc-cceEEEEecC------CCChHHHHHHHHH
Confidence 32221 112333333332211 11111 222347788899998773 3333333211 1122222333322
Q ss_pred hcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccceeccccceeeeccccccccccCCCEEEEccccccccCcc
Q psy9964 315 EFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHSVRYIGPGCALLGDSAHRIHPLA 394 (595)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~grvvLvGDAAH~~~P~~ 394 (595)
.+... | . +. ....+++.....+++..+|++|||||||.++|+.
T Consensus 335 ~~~~~----------------------p---------~-l~-----~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~ 377 (550)
T 2e4g_A 335 MWHLD----------------------P---------E-TQ-----PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLE 377 (550)
T ss_dssp HTTCC----------------------T---------T-TS-----CCEEEECCCEEESCSEETTEEECSTTTEECCGGG
T ss_pred hhCcC----------------------c---------c-cC-----CCceEEecCCCccccccCCEEEEehhhcccCccc
Confidence 22110 0 0 00 0011233333455667899999999999999999
Q ss_pred chhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchHHHHHHHHHHhhcC
Q psy9964 395 GQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPVMLSIDLMYRVYRS 455 (595)
Q Consensus 395 GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 455 (595)
|||+|+|++||..|+++|.. +.. .+.+|+.|+++|++++..+.........+...
T Consensus 378 GqGi~~a~~da~~La~~L~~----~~~--~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r 432 (550)
T 2e4g_A 378 STGIYFVYAALYQLVKHFPD----KSL--NPVLTARFNREIETMFDDTRDFIQAHFYFSPR 432 (550)
T ss_dssp SCHHHHHHHHHHHHHHTCCC----TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hhhHHHHHHHHHHHHHhccc----cCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999988742 222 57899999999999999998888877776443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.78 E-value=1.5e-18 Score=180.05 Aligned_cols=273 Identities=14% Similarity=0.074 Sum_probs=152.8
Q ss_pred cccceeeeHHHHHHHHHHHHhcCCceEEeCC-eEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcCCCC
Q psy9964 163 DRISYIVENDLIIDAVTKKLNTLNIDIVYQK-KVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMNVQY 241 (595)
Q Consensus 163 ~~~~~~i~R~~L~~~L~~~~~~~gv~i~~~~-~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~ 241 (595)
..+++.+.|..+...|.+.+.+.|+++++.. ++.+++. ...++|+||+|||.+|.+|... ...
T Consensus 113 ~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~~---------------~~~~ad~VV~AdG~~S~~~~~~-~~~ 176 (430)
T 3ihm_A 113 KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLEG---------------LSEQYDLLVVCTGKYALGKVFE-KQS 176 (430)
T ss_dssp EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHHH---------------HHTTSSEEEECCCCTTGGGGSC-BCG
T ss_pred CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhhh---------------hcccCCEEEECCCCcchHHhcc-CCC
Confidence 4567899999999999999998999988732 1222221 0126899999999999998543 221
Q ss_pred ccc--CCCCeE-EEEEEEec-cCCCCceEEEEeCCCCcEEEeeCCC--CCe--EEEEecCHhhHHHHhCC----CchHHH
Q psy9964 242 SNW--SYDQKG-IVATVKIS-TSPPNRTAWQRFTPSGTVALLPLSD--EFS--SLVWATTPENAKALLQM----PGESFV 309 (595)
Q Consensus 242 ~~~--~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~p~~~--~~~--~~~~~~~~~~~~~~~~~----~~~~~~ 309 (595)
... .+.... ....+... .+......+..+...|.++++|... +.. .++|..+......+... +++++.
T Consensus 177 ~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (430)
T 3ihm_A 177 ENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFL 256 (430)
T ss_dssp GGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHH
T ss_pred CCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHH
Confidence 111 222222 22222221 1122344555566667788888532 322 23344443221122222 333333
Q ss_pred HHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCCCccc--eec-ccc---ceeeeccccccccccCCCEEE-
Q psy9964 310 DALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVPPRVM--SVE-EKS---RAAFPLGFGHSVRYIGPGCAL- 382 (595)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~---~~~~~~~~~~~~~~~~grvvL- 382 (595)
+.+.+.+ ..+.|+.... ...+. ... ... ...+|+......+|..||++|
T Consensus 257 ~~~~~~~---------------------~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 312 (430)
T 3ihm_A 257 DLMLEKL---------------------GKHHPSVAER---IDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIG 312 (430)
T ss_dssp HHHHHHH---------------------HHHCHHHHTT---BCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEE
T ss_pred HHHHHHH---------------------HHhCccHHHH---HhhchhccccCccceeecceeecccccccccCCCCEEEE
Confidence 3333221 1111110000 00000 000 000 012343334567889999999
Q ss_pred EccccccccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhh-hccchHHHHHHHHHHhhcCCchHHH
Q psy9964 383 LGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQ-RENLPVMLSIDLMYRVYRSSLTPVK 461 (595)
Q Consensus 383 vGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (595)
+|||||.|+|++|||+|+||+||..|+++|... + + .+++|..|+.+|+ +++..+.+.+..+..-...+.+
T Consensus 313 ~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~-~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--- 383 (430)
T 3ihm_A 313 LGDIQATVDPVLGQGANMASYAAWILGEEILAH---S-V--YDLRFSEHLERRRQDRVLCATRWTNFTLSALSALPP--- 383 (430)
T ss_dssp CGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---S-C--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH---
T ss_pred ecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---C-C--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcH---
Confidence 999999999999999999999999999999764 2 2 5789999999988 5655555555444321111111
Q ss_pred HHHHHHHHhhccChhHHHHHHHHH
Q psy9964 462 ILGNLGFQLVNAVRPIKSILCDIF 485 (595)
Q Consensus 462 ~~r~~~~~~~~~~~~~~~~~~~~~ 485 (595)
.++ .++..+...|.+.+.+.+.+
T Consensus 384 ~~~-~~~~~~~~~~~~~~~~~~~~ 406 (430)
T 3ihm_A 384 EFL-AFLQILSQSREMADEFTDNF 406 (430)
T ss_dssp HHH-HHHHHHHHCHHHHHHHHHGG
T ss_pred HHH-HHHHHHhhCHHHHHHHHHhC
Confidence 122 23333456677777766543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.59 E-value=7.6e-15 Score=154.54 Aligned_cols=251 Identities=16% Similarity=0.084 Sum_probs=136.0
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEE--c-CC--cEEEecEEEEecCCCchhhhhcCCCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKF--E-SG--ESIECKLLLGTDGARSQVRNAMNVQY 241 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~--~-dG--~~~~adlvVgADG~~S~vR~~l~~~~ 241 (595)
..+++..|.+.|.+.+.+.|++|+++++|++++..+++++.+.|++ . +| +++++|+||+|||.+|.+|+..+...
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~ 240 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIREM 240 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccchhh
Confidence 3588999999999999889999999999999986311235678877 4 66 47999999999999999998776543
Q ss_pred cccCCCCeEEEEEEEe---cc---CCCCceEEEE---eC-----CCC-cEE-EeeCCCCCeEEEEecCHhh---------
Q psy9964 242 SNWSYDQKGIVATVKI---ST---SPPNRTAWQR---FT-----PSG-TVA-LLPLSDEFSSLVWATTPEN--------- 296 (595)
Q Consensus 242 ~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~---~~-----~~g-~~~-~~p~~~~~~~~~~~~~~~~--------- 296 (595)
.+... .......+.. .. .......+.. +. ..| .+. ++|++++...++.......
T Consensus 241 ~g~~~-~~~~~~l~~~~~~~~~~~~~~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 319 (497)
T 2bry_A 241 RGKLA-IGITANFVNGRTVEETQVPEISGVARIYNQKFFQSLLKATGIDLENIVYYKDETHYFVMTAKKQCLLRLGVLRQ 319 (497)
T ss_dssp ECSCC-EEEEEEEECCCCHHHHTSCCBCC----CCSSHHHHHHHHHCCCEEEEEEEESSEEEEEEEECHHHHHHTTSBSS
T ss_pred cCcee-EeeeeeeeeeccccccchhhcCceEEecChhhhHhHHhhcCCCcccccccCCCeEEEEeccccccccccceeec
Confidence 33321 0111111211 00 0111111110 00 011 111 3344443322222111100
Q ss_pred ----HHHHhC---CCchHHHHHHHHhcCCCcchhhHHHHhhhhhhchhhhccccCCCcccCC-Cccceeccccceeeecc
Q psy9964 297 ----AKALLQ---MPGESFVDALNSEFNKPAELNESIQVATKFTHNVLEFFNLSTGNEQVVP-PRVMSVEEKSRAAFPLG 368 (595)
Q Consensus 297 ----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 368 (595)
...+.. .+.+.+...... ..+.. .+.....+.... ..+. +.+.-....+...|++.
T Consensus 320 ~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~ 383 (497)
T 2bry_A 320 DLSETDQLLGKANVVPEALQRFARA-------AADFA---THGKLGKLEFAQ------DARGRPDVAAFDFTSMMRAESS 383 (497)
T ss_dssp CCSSHHHHTSTTTBCHHHHHHHHHH-------HHHHH---TTTTTCSCCBCB------CTTSSBCEEEEECSEEEEESCS
T ss_pred cccchHhhhhhccCCHHHHHHhhcc-------ccccc---hhhccccchhhh------hccCCCCCceeeeEEEEecchh
Confidence 000000 011111000000 00000 000000000000 0011 11111133456678888
Q ss_pred ccccccccCCC-EEEEccccc-cccCccchhhhhchHHHHHHHHHHHHhhhCCCCCCChHHHHHHHHHhhhccchH
Q psy9964 369 FGHSVRYIGPG-CALLGDSAH-RIHPLAGQGVNLGFGDIACLVQLSAESVSNGYPIGHPESLTKYESIRQRENLPV 442 (595)
Q Consensus 369 ~~~~~~~~~gr-vvLvGDAAH-~~~P~~GqG~n~Al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~r~~~~~~~ 442 (595)
...+++|..|| ++|+||||| .+.| .|||+|++|+||..|+|.|+.. .+|.. ....| .+|++.+..+
T Consensus 384 ~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~-~~g~~--~~~~l----~~r~~~~~~l 451 (497)
T 2bry_A 384 ARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRW-AEGAG--PLEVL----AERESLYQLL 451 (497)
T ss_dssp EEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHH-HTTCC--HHHHH----HHHHHHHTTG
T ss_pred hHHHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHH-hCCCC--ccchh----hhHHHHhhhh
Confidence 88899999998 999999999 4555 9999999999999999999876 45544 34555 6677655543
No 30
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.42 E-value=2.1e-13 Score=140.44 Aligned_cols=100 Identities=38% Similarity=0.714 Sum_probs=81.2
Q ss_pred eEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHh
Q psy9964 4 IKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEM 83 (595)
Q Consensus 4 ~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~ 83 (595)
|+|+++|+++++|+|||+|+.+++.+|||||..... .....+...++++.+|++||+||.|.||++|++.+.+.
T Consensus 1 M~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~------~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~ 74 (431)
T 3iek_A 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGK------EEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE 74 (431)
T ss_dssp CEEEECSCSSSSSCCCEEEEETTEEEEECCCCCCGG------GGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT
T ss_pred CEEEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcch------hhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc
Confidence 689999999999999999999999999999973211 11123444556668999999999999999999999884
Q ss_pred cCCCccEEEcCccchhhHHHHHhhhcc
Q psy9964 84 FGYAGPIYMTHPTKAIAPILLEDFRKI 110 (595)
Q Consensus 84 ~~~~~~v~~~~~~~~~~~~~l~~~~~~ 110 (595)
+++++||++.++...+...+.+...+
T Consensus 75 -~~~~~Iy~t~~t~~l~~~~l~d~~~~ 100 (431)
T 3iek_A 75 -GYRGPVYATRATVLLMEIVLEDALKV 100 (431)
T ss_dssp -TCCSCEEECHHHHHHHHHHHHHHHHH
T ss_pred -CCCCeEEEcHHHHHHHHHHHHHHHhh
Confidence 45799999999998888877765443
No 31
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.39 E-value=5.2e-13 Score=139.25 Aligned_cols=101 Identities=50% Similarity=0.904 Sum_probs=79.1
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHH
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTE 82 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~ 82 (595)
+|++++||+++++|+|||+|+.++..+|||||......... .+..+. ++.+.+|++||+||.|.||++|++.+..
T Consensus 11 ~m~i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~---~~~~l~--~~~~~~Id~VllTH~H~DH~ggl~~l~~ 85 (459)
T 2i7t_A 11 QLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMD---ALPYID--LIDPAEIDLLLISHFHLDHCGALPWFLQ 85 (459)
T ss_dssp EEEEEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGG---GSCCGG--GSCGGGCCEEECCCSSHHHHTTHHHHHH
T ss_pred eEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCccccc---ccCccc--ccCcccCcEEEECCCChhhhhhhHHHHH
Confidence 48999999999999999999999999999999753211111 112222 3445789999999999999999999988
Q ss_pred hcCCCccEEEcCccchhhHHHHHhhh
Q psy9964 83 MFGYAGPIYMTHPTKAIAPILLEDFR 108 (595)
Q Consensus 83 ~~~~~~~v~~~~~~~~~~~~~l~~~~ 108 (595)
..+++.+||++.++..++...+.+..
T Consensus 86 ~~~~~~~iy~t~~t~~l~~~~l~d~~ 111 (459)
T 2i7t_A 86 KTSFKGRTFMTHATKAIYRWLLSDYV 111 (459)
T ss_dssp HSSCCSEEEEEHHHHHHHHHHHHHHC
T ss_pred hcCCCCCEEechHHHHHHHHHHHHHH
Confidence 77777899999998877776665543
No 32
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.36 E-value=6.9e-13 Score=140.30 Aligned_cols=102 Identities=24% Similarity=0.422 Sum_probs=79.8
Q ss_pred CCceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCC----CCCCccccccCCCCCCCccEEEeCCCChhhcCC
Q psy9964 1 MSEIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDR----KFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGA 76 (595)
Q Consensus 1 m~~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~----~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g 76 (595)
|..|+++++|+.+++|+|||+|+.+++.+|||||......... ..+.+.++.. .+.+|++||+||+|.||++|
T Consensus 6 ~~~i~i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~---~~~~Id~I~lTH~H~DHigg 82 (555)
T 3zq4_A 6 NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVK---NEDKIKGLFITHGHEDHIGG 82 (555)
T ss_dssp CCSEEEEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHT---TTTTEEEEEESCCCHHHHTT
T ss_pred CCcEEEEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhc---CccCCCEEEECCCchhhhCC
Confidence 4569999999999999999999999999999999754322111 1122344433 23789999999999999999
Q ss_pred cHHHHHhcCCCccEEEcCccchhhHHHHHhh
Q psy9964 77 LPYFTEMFGYAGPIYMTHPTKAIAPILLEDF 107 (595)
Q Consensus 77 ~~~l~~~~~~~~~v~~~~~~~~~~~~~l~~~ 107 (595)
++++.+. ++++||+++.+...+...+...
T Consensus 83 l~~l~~~--~~~pIy~t~~t~~ll~~~l~~~ 111 (555)
T 3zq4_A 83 IPYLLRQ--VNIPVYGGKLAIGLLRNKLEEH 111 (555)
T ss_dssp HHHHHTT--CCCCEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHh--cCceEEECHHHHHHHHHHHHHc
Confidence 9999985 3689999999888877766543
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.34 E-value=3.8e-11 Score=120.12 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=116.2
Q ss_pred CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEE-ecEEEEecCCCchhhhhcCCCC-----cccCCCCeEEEEEEEecc
Q psy9964 186 NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIE-CKLLLGTDGARSQVRNAMNVQY-----SNWSYDQKGIVATVKIST 259 (595)
Q Consensus 186 gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~-adlvVgADG~~S~vR~~l~~~~-----~~~~~~~~~~~~~~~~~~ 259 (595)
|++|+++++|++++. ++++++|++.+|++.. +|+||+|||.+|.+|.....+. ....|. ..+...+..+.
T Consensus 119 g~~i~~~~~v~~i~~---~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~ 194 (336)
T 1yvv_A 119 DMPVSFSCRITEVFR---GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMD-PTWAVALAFET 194 (336)
T ss_dssp TCCEECSCCEEEEEE---CSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEE-EEEEEEEEESS
T ss_pred cCcEEecCEEEEEEE---eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCcc-ceeEEEEEecC
Confidence 789999999999996 5678999999998664 9999999999999996633211 223342 22333344443
Q ss_pred CCCCceEEEEeCCCCcEEEe------eCCCCC-eEEEEecCHhhHHHHhCCCchHHHHHHHHhcCCCcchhhHHHHhhhh
Q psy9964 260 SPPNRTAWQRFTPSGTVALL------PLSDEF-SSLVWATTPENAKALLQMPGESFVDALNSEFNKPAELNESIQVATKF 332 (595)
Q Consensus 260 ~~~~~~~~~~~~~~g~~~~~------p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (595)
+.. ......+.+++.+.++ |...+. ..++|....+........+.+++.+.+.+.+
T Consensus 195 ~~~-~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l---------------- 257 (336)
T 1yvv_A 195 PLQ-TPMQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF---------------- 257 (336)
T ss_dssp CCS-CCCCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH----------------
T ss_pred CCC-CCCCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHH----------------
Confidence 221 1122223456666555 444443 5788888766555555566666666554432
Q ss_pred hhchhhhccccCCCcccCCCccceeccccceeeecccccc-ccc-cCCCEEEEccccccccCccchhhhhchHHHHHHHH
Q psy9964 333 THNVLEFFNLSTGNEQVVPPRVMSVEEKSRAAFPLGFGHS-VRY-IGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQ 410 (595)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~ 410 (595)
.+++... ...|... . ...+...+|...... ..| ..+|++|+|||+|. .|++.|+.|+..||+
T Consensus 258 -~~~lg~~-------~~~p~~~-~-~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g------~gv~~a~~sg~~lA~ 321 (336)
T 1yvv_A 258 -AELIDCT-------MPAPVFS-L-AHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS------GRVEGAWLSGQEAAR 321 (336)
T ss_dssp -HTTCSSC-------CCCCSEE-E-EEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT------SSHHHHHHHHHHHHH
T ss_pred -HHHhCCC-------CCCCcEE-E-ccccCccCCCCCCCCCeeecCCCCEEEEecCCCC------CCHHHHHHHHHHHHH
Confidence 2222210 0001111 1 111112223221111 112 34899999999974 499999999999999
Q ss_pred HHHHhhh
Q psy9964 411 LSAESVS 417 (595)
Q Consensus 411 ~L~~~~~ 417 (595)
.|.+.+.
T Consensus 322 ~l~~~~~ 328 (336)
T 1yvv_A 322 RLLEHLQ 328 (336)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9977643
No 34
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.33 E-value=1.2e-12 Score=139.32 Aligned_cols=103 Identities=22% Similarity=0.398 Sum_probs=77.9
Q ss_pred CCceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCC----CCCCccccccCCCCCCCccEEEeCCCChhhcCC
Q psy9964 1 MSEIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDR----KFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGA 76 (595)
Q Consensus 1 m~~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~----~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g 76 (595)
|..|++++||+.+++|+|||+|+.+++.+|||||.+....... ..+.+.++.. .+.+|++||+||.|.||++|
T Consensus 14 ~~~~~i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~---~~~~Id~I~iTH~H~DHigg 90 (562)
T 3bk2_A 14 QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIE---HRHKIKAWVLTHGHEDHIGG 90 (562)
T ss_dssp CCCEEEEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHH---TGGGEEEEECCCCCHHHHTT
T ss_pred CCcEEEEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhc---CcccCcEEEECCCChHHhCC
Confidence 5679999999999999999999999999999999753321100 0122333322 23789999999999999999
Q ss_pred cHHHHHhcC---CCccEEEcCccchhhHHHHHh
Q psy9964 77 LPYFTEMFG---YAGPIYMTHPTKAIAPILLED 106 (595)
Q Consensus 77 ~~~l~~~~~---~~~~v~~~~~~~~~~~~~l~~ 106 (595)
+++|.+.+. .+++||++..+...+...+..
T Consensus 91 l~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~ 123 (562)
T 3bk2_A 91 LPFLLPMIFGKESPVPIYGARLTLGLLRGKLEE 123 (562)
T ss_dssp HHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHhhccccCCceEEeCHHHHHHHHHHHHH
Confidence 999998641 148999999988877766543
No 35
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.31 E-value=3.3e-12 Score=132.26 Aligned_cols=96 Identities=25% Similarity=0.313 Sum_probs=72.0
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCC---C---------CCCCcccccc---------CCCCCCCc
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDD---R---------KFPDFKFIAP---------QGPVTDMI 61 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~---~---------~~~~~~~l~~---------~~~~~~~i 61 (595)
+|+|++||+++++|+|||+|+.+++.+|||||.+...... . ..+.+.++.. .+..+.+|
T Consensus 6 ~m~i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i 85 (429)
T 2az4_A 6 KTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQH 85 (429)
T ss_dssp CEEEEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSE
T ss_pred ceEEEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccC
Confidence 3899999999999999999999999999999986432110 0 1122222210 13345789
Q ss_pred cEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhhHH
Q psy9964 62 DCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIAPI 102 (595)
Q Consensus 62 ~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~~~ 102 (595)
++||+||.|.||++|++.+.+ +++||++..+...+..
T Consensus 86 ~~v~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~ 122 (429)
T 2az4_A 86 TAVFLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNS 122 (429)
T ss_dssp EEEECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHH
T ss_pred CEEEECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHH
Confidence 999999999999999999976 4899999988776654
No 36
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.30 E-value=3.1e-12 Score=137.92 Aligned_cols=100 Identities=37% Similarity=0.709 Sum_probs=77.7
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCC-CCCCccEEEeCCCChhhcCCcHHHH
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGP-VTDMIDCLIISHFHLDHCGALPYFT 81 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~-~~~~i~~i~lTH~H~DH~~g~~~l~ 81 (595)
.|++++||+++++|+|||+|+.++..+|||||..... . ...+..+...+. .+.+|++||+||.|.||+||+++|.
T Consensus 183 ~m~I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~-~---~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~ 258 (640)
T 2xr1_A 183 WVRVTALGGCKEVGRSCFLLSTPESRILIDCGVNVGS-D---ENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLF 258 (640)
T ss_dssp CCEEEEEECSSSSBCCEEEEECSSCEEEECCCCBCSS-C---SSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHH
T ss_pred ceEEEEEecCCCCCCcEEEEEECCeEEEEeCCCCccc-c---ccccccccccccCCcccCcEEEECCCChhhhccHHHHH
Confidence 4899999999999999999998889999999976321 0 122233332233 4578999999999999999999999
Q ss_pred HhcCCCccEEEcCccchhhHHHHHhh
Q psy9964 82 EMFGYAGPIYMTHPTKAIAPILLEDF 107 (595)
Q Consensus 82 ~~~~~~~~v~~~~~~~~~~~~~l~~~ 107 (595)
+. .++++||++..+...+...+.++
T Consensus 259 ~~-~~~~~Iy~t~~t~~ll~~~l~d~ 283 (640)
T 2xr1_A 259 KY-GYEGPVYCTPPTRDLMVLLQLDY 283 (640)
T ss_dssp HT-TCCSCEEECHHHHHHHHHHHHHH
T ss_pred hc-CCCCeEEECHHHHHHHHHHHHHH
Confidence 73 44689999999888776665544
No 37
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.30 E-value=2.6e-12 Score=126.78 Aligned_cols=92 Identities=22% Similarity=0.249 Sum_probs=72.6
Q ss_pred eEEEEecCCCCC-----CCcEEEEEE----CCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhc
Q psy9964 4 IKVTPLGAGQDV-----GRSCILVSM----GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHC 74 (595)
Q Consensus 4 ~~i~~lg~~~~~-----~~~~~~i~~----~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~ 74 (595)
|+|++||+++++ +.|||+|.. +++.+|||||.+. ...+.+.++.+.+|++||+||.|.||+
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~----------~~~l~~~~~~~~~i~~i~iTH~H~DH~ 71 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGT----------QHQLLHTAFNPGKLDKIFISHLHGDHL 71 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTH----------HHHHHTSCCCTTTEEEEECSCCCHHHH
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHH----------HHHHHHhCCCHHHcCEEEEecCCchhh
Confidence 789999999876 359999997 7889999999642 234555555568999999999999999
Q ss_pred CCcHHHHHhc-----CCCccEEEcCccchhhHHHHH
Q psy9964 75 GALPYFTEMF-----GYAGPIYMTHPTKAIAPILLE 105 (595)
Q Consensus 75 ~g~~~l~~~~-----~~~~~v~~~~~~~~~~~~~l~ 105 (595)
+|++.+.+.. ...++||++..+...+...+.
T Consensus 72 ~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 107 (306)
T 2cbn_A 72 FGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALR 107 (306)
T ss_dssp TTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHH
T ss_pred CChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHH
Confidence 9999987642 135789999988777665543
No 38
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.29 E-value=2.7e-12 Score=138.56 Aligned_cols=102 Identities=33% Similarity=0.682 Sum_probs=77.5
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHH
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTE 82 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~ 82 (595)
.|+++++|+++++|.|||+|+.++..+|||||...... .....+..+...+..+.+|++||+||+|.||+||++++.+
T Consensus 179 ~m~i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~--~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~ 256 (636)
T 2ycb_A 179 WARLTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGG--DDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYH 256 (636)
T ss_dssp CCEEEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSC--CHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHH
T ss_pred eEEEEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccc--cchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHh
Confidence 38999999999999999999998899999999763210 0001122232223455799999999999999999999987
Q ss_pred hcCCCccEEEcCccchhhHHHHHhh
Q psy9964 83 MFGYAGPIYMTHPTKAIAPILLEDF 107 (595)
Q Consensus 83 ~~~~~~~v~~~~~~~~~~~~~l~~~ 107 (595)
. +++++||++..+...+...+.+.
T Consensus 257 ~-~~~~~Iy~t~~t~~l~~~~l~d~ 280 (636)
T 2ycb_A 257 Y-GYDGPVYCTAPTRDLMTLLQLDH 280 (636)
T ss_dssp T-TCCSCEEECHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEcchHHHHHHHHHHHH
Confidence 3 44689999999888776665544
No 39
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.28 E-value=2.2e-12 Score=129.76 Aligned_cols=93 Identities=24% Similarity=0.281 Sum_probs=74.8
Q ss_pred eEEEEecCCCCC-----CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcH
Q psy9964 4 IKVTPLGAGQDV-----GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALP 78 (595)
Q Consensus 4 ~~i~~lg~~~~~-----~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~ 78 (595)
|+|++||+++.. +.|||+|..++..+|||||.+. ...+.+.++++.+|++|||||.|.||++|++
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~----------~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~ 70 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGT----------QTQLMKSQLKAGRITKIFITHLHGDHFFGLP 70 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTH----------HHHHHHSSSCGGGEEEEECCCSSGGGTTTHH
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhH----------HHHHHHcCCChHHCCEEEECCCChHHhCcHH
Confidence 689999988754 4699999999999999999652 2445555666679999999999999999999
Q ss_pred HHHHhcC---------CCccEEEcCccchhhHHHHHh
Q psy9964 79 YFTEMFG---------YAGPIYMTHPTKAIAPILLED 106 (595)
Q Consensus 79 ~l~~~~~---------~~~~v~~~~~~~~~~~~~l~~ 106 (595)
.|..... ..++||++.....++...++.
T Consensus 71 ~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l~~ 107 (368)
T 3zwf_A 71 GLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMEL 107 (368)
T ss_dssp HHHHHHHHHC------CCEEEEEETTHHHHHHHHHHH
T ss_pred HHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHHHh
Confidence 9886531 157899999988877766543
No 40
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.23 E-value=1.1e-11 Score=123.19 Aligned_cols=91 Identities=20% Similarity=0.265 Sum_probs=71.4
Q ss_pred eEEEEecCCCCC-----CCcEEEEEE---CCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcC
Q psy9964 4 IKVTPLGAGQDV-----GRSCILVSM---GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCG 75 (595)
Q Consensus 4 ~~i~~lg~~~~~-----~~~~~~i~~---~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~ 75 (595)
|+|++||+++.+ +.|||+|.. ++..+|||||.+. ...+.+.++.+.+|++||+||.|.||++
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~----------~~~l~~~~~~~~~i~~I~iTH~H~DH~~ 70 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEAT----------QHQMLHTTIKPRKIEKIFITHMHGDHVY 70 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTH----------HHHHTTSSCCGGGEEEEECSBCCGGGTT
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHH----------HHHHHHcCCCHHHcCEEEEeCCChhhhC
Confidence 589999999876 469999998 8889999999652 1344444555678999999999999999
Q ss_pred CcHHHHHhc-----CCCccEEEcCccchhhHHHH
Q psy9964 76 ALPYFTEMF-----GYAGPIYMTHPTKAIAPILL 104 (595)
Q Consensus 76 g~~~l~~~~-----~~~~~v~~~~~~~~~~~~~l 104 (595)
|++.+.+.+ ...++||++..+...+...+
T Consensus 71 gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 104 (320)
T 1y44_A 71 GLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSL 104 (320)
T ss_dssp THHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHH
Confidence 999988743 12578999998877666554
No 41
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.22 E-value=8.8e-12 Score=134.84 Aligned_cols=102 Identities=36% Similarity=0.658 Sum_probs=75.6
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCC---C--CC--CCccEEEeCCCChhhcC
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQG---P--VT--DMIDCLIISHFHLDHCG 75 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~---~--~~--~~i~~i~lTH~H~DH~~ 75 (595)
.|+++++|+++++|+|||+|..++..+|||||....... . ....+...+ + .+ .+|++||+||.|.||+|
T Consensus 188 ~m~i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~-~---g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiG 263 (651)
T 3af5_A 188 WIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLN-D---PYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCG 263 (651)
T ss_dssp CEEEEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTT-C---HHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHT
T ss_pred ceEEEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccc-c---chhhcccccchhhccCcccCCCCEEEECCCChHhhc
Confidence 389999999999999999999999999999997632100 0 001111111 1 33 67999999999999999
Q ss_pred CcHHHHHhcCCCccEEEcCccchhhHHHHHhhh
Q psy9964 76 ALPYFTEMFGYAGPIYMTHPTKAIAPILLEDFR 108 (595)
Q Consensus 76 g~~~l~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 108 (595)
|++++.+...++++||++..+...+...+.+..
T Consensus 264 glp~L~~~~~~~~pIy~t~~t~~ll~~~l~d~~ 296 (651)
T 3af5_A 264 MLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFI 296 (651)
T ss_dssp THHHHHHTTCCCSCEEECHHHHHHHHHHHHHHH
T ss_pred CHHHHHhcCCCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999732146899999998887776665443
No 42
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.22 E-value=1.8e-11 Score=118.24 Aligned_cols=87 Identities=22% Similarity=0.283 Sum_probs=67.3
Q ss_pred ceEEEEecCCCCC-----CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCc
Q psy9964 3 EIKVTPLGAGQDV-----GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGAL 77 (595)
Q Consensus 3 ~~~i~~lg~~~~~-----~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~ 77 (595)
.|+|++||+++.+ +.|||+|+.++..+|||||.+. ...+.+. +.+.+|++||+||.|.||++|+
T Consensus 24 ~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~----------~~~l~~~-~~~~~i~~v~iTH~H~DH~~gl 92 (268)
T 1zkp_A 24 AMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGV----------LAQLQKY-ITPSDIDAVVLSHYHHDHVADI 92 (268)
T ss_dssp CEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTH----------HHHHTTT-CCGGGCCEEECSCCCHHHHTTH
T ss_pred CcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHH----------HHHHHHh-CCcccCCEEEEecCCchhhCCH
Confidence 4899999988755 4699999999999999999642 1233333 4457899999999999999999
Q ss_pred HHHHHhc---------CCCccEEEcCccchhh
Q psy9964 78 PYFTEMF---------GYAGPIYMTHPTKAIA 100 (595)
Q Consensus 78 ~~l~~~~---------~~~~~v~~~~~~~~~~ 100 (595)
+.+.+.. ...++||+++.+...+
T Consensus 93 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 124 (268)
T 1zkp_A 93 GVLQYARLITSATKGQLPELPIYGHTFDENGF 124 (268)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEEECSSSHHHH
T ss_pred HHHHHHHHhcccccCCCCceEEEeCccHHHHH
Confidence 9887641 1257899998876543
No 43
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.17 E-value=1.9e-11 Score=117.24 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=63.0
Q ss_pred CceEEEEecCCCCC-----------------------CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCC
Q psy9964 2 SEIKVTPLGAGQDV-----------------------GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVT 58 (595)
Q Consensus 2 ~~~~i~~lg~~~~~-----------------------~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~ 58 (595)
|+|++++||++++. +.+||+|+.+++.+|||||.+. ... .+.+
T Consensus 1 m~~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~---------~~~-----~~~~ 66 (258)
T 3g1p_A 1 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHD---------LAD-----RWSP 66 (258)
T ss_dssp -CEEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTT---------HHH-----HCCT
T ss_pred CceEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchH---------HHh-----hcCc
Confidence 36999999999644 3578999999999999999431 111 1223
Q ss_pred CCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccc
Q psy9964 59 DMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTK 97 (595)
Q Consensus 59 ~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~ 97 (595)
.+|++||+||.|.||++|++.+....+..++||++..+.
T Consensus 67 ~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~ 105 (258)
T 3g1p_A 67 GSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQ 105 (258)
T ss_dssp TSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSS
T ss_pred ccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhh
Confidence 689999999999999999998876433358899998766
No 44
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.16 E-value=1.3e-11 Score=133.83 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=70.8
Q ss_pred eEEEEec-CCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCC-ccccccCCCCCCCccEEEeCCCChhhcCCcHHHH
Q psy9964 4 IKVTPLG-AGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPD-FKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFT 81 (595)
Q Consensus 4 ~~i~~lg-~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~ 81 (595)
|++++++ +.+++++|||+|..++..||||||.... ...++. ..++.+. . .+|++|||||.|.||+||+++|.
T Consensus 1 m~~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~---~~~~~~~l~~L~~~--~-~~IdaVlLTH~H~DHiGgLp~L~ 74 (717)
T 2i7x_A 1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPS---KVSYEQCIKYWEKV--I-PEIDVIILSQPTIECLGAHSLLY 74 (717)
T ss_dssp CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTT---TSCHHHHHHHHHTT--G-GGCCEEECCCSSHHHHTTHHHHH
T ss_pred CEEEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcc---cchhhhHHHHHHhc--C-CCCCEEEECCCChHHHCCHHHHH
Confidence 4577774 4467789999999999999999997631 001111 1223322 2 38999999999999999999998
Q ss_pred HhcC----CCccEEEcCccchhhHHHHHhh
Q psy9964 82 EMFG----YAGPIYMTHPTKAIAPILLEDF 107 (595)
Q Consensus 82 ~~~~----~~~~v~~~~~~~~~~~~~l~~~ 107 (595)
+.++ .+++||++.++..++...+.+.
T Consensus 75 ~~~~~g~~~~~pIY~t~~t~~l~~~~l~d~ 104 (717)
T 2i7x_A 75 YNFTSHFISRIQVYATLPVINLGRVSTIDS 104 (717)
T ss_dssp HHSHHHHHHTCEEEEEHHHHHHHHHHHHHH
T ss_pred HhhhhcccCCceEEecchhHHHHHHHHHHH
Confidence 7531 2589999999888776666543
No 45
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.15 E-value=2.3e-11 Score=112.53 Aligned_cols=85 Identities=20% Similarity=0.339 Sum_probs=63.7
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHH
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTE 82 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~ 82 (595)
+++++..|. .+.|||+|..+++.+|||||.... ...+.+.+.+ .++++||+||.|.||++|++.+.+
T Consensus 2 ~i~~~~~g~---~~~n~~li~~~~~~iliD~G~~~~-------~l~~~l~~~g---~~i~~vilTH~H~DH~gg~~~l~~ 68 (207)
T 2zwr_A 2 RVFPVTLGP---LQENAYLVETGEGPVLIDPGDEPE-------KLLALFQTTG---LIPLAILLTHAHFDHVGAVAPLVE 68 (207)
T ss_dssp EEEEEEETT---TTEEEEEEEETTEEEEECCCSCHH-------HHHHHHHHHT---CCCSCEECSCCCGGGTTTHHHHHH
T ss_pred eEEEEecCC---cccEEEEEEeCCcEEEEeCCCCHH-------HHHHHHHHcC---CcccEEEECCCChHHHccHHHHHH
Confidence 344444444 356999999988999999995311 2234555555 359999999999999999999988
Q ss_pred hcCCCccEEEcCccchhhHH
Q psy9964 83 MFGYAGPIYMTHPTKAIAPI 102 (595)
Q Consensus 83 ~~~~~~~v~~~~~~~~~~~~ 102 (595)
.+ +++||+++.+...+..
T Consensus 69 ~~--~~~v~~~~~~~~~~~~ 86 (207)
T 2zwr_A 69 AL--DLPVYLHPLDLPLYEG 86 (207)
T ss_dssp HH--CCCEEECGGGHHHHHT
T ss_pred Hh--CCcEEECHHHHHHHhC
Confidence 65 5899999988765543
No 46
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.14 E-value=8.2e-12 Score=119.61 Aligned_cols=95 Identities=25% Similarity=0.335 Sum_probs=68.9
Q ss_pred CCceEEEEecCCC------------------CCCCcEEEEEECCeEEEEeCCCCCCCCCC------------------CC
Q psy9964 1 MSEIKVTPLGAGQ------------------DVGRSCILVSMGGKNIMLDCGMHMGYHDD------------------RK 44 (595)
Q Consensus 1 m~~~~i~~lg~~~------------------~~~~~~~~i~~~~~~~liD~G~~~~~~~~------------------~~ 44 (595)
|+.|+++.++++. ..+.|||+|+.+++.+|||||.+...... ..
T Consensus 5 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 84 (254)
T 3dha_A 5 MTVKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEE 84 (254)
T ss_dssp CCBSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGG
T ss_pred cCceEEEEecCccEEechhhccCCCCCCceEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCch
Confidence 5567888886554 12349999999999999999975211000 01
Q ss_pred CCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhh
Q psy9964 45 FPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 45 ~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
....+.+.+.++++.+|++||+||.|.||++|++.|. +++||+++.+...+
T Consensus 85 ~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~~-----~~~i~~~~~~~~~~ 135 (254)
T 3dha_A 85 DRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFT-----NTPIIVQRTEYEAA 135 (254)
T ss_dssp GSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGCS-----SSCEEEEHHHHHHH
T ss_pred hhHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHCC-----CCEEEECHHHHHHh
Confidence 1234566777887788999999999999999998775 47999998766544
No 47
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.14 E-value=1.3e-11 Score=119.67 Aligned_cols=95 Identities=25% Similarity=0.341 Sum_probs=69.7
Q ss_pred CCceEEEEecCCCC------------------CCCcEEEEEECCeEEEEeCCCCCCC----------CCCCCCCCccccc
Q psy9964 1 MSEIKVTPLGAGQD------------------VGRSCILVSMGGKNIMLDCGMHMGY----------HDDRKFPDFKFIA 52 (595)
Q Consensus 1 m~~~~i~~lg~~~~------------------~~~~~~~i~~~~~~~liD~G~~~~~----------~~~~~~~~~~~l~ 52 (595)
|+.|+|++|+++.. .+.|||+|+.+++.+|||||.+... ...........+.
T Consensus 1 m~~~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 80 (274)
T 3aj3_A 1 MSDTKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALG 80 (274)
T ss_dssp -CCCEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHH
T ss_pred CCccEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHH
Confidence 78899999977642 1248999998889999999975310 0000112345677
Q ss_pred cCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhh
Q psy9964 53 PQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 53 ~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
+.++++.+|++||+||.|.||++|++.|. +++||+++.+...+
T Consensus 81 ~~g~~~~~i~~VilTH~H~DH~gg~~~~~-----~a~v~~~~~~~~~~ 123 (274)
T 3aj3_A 81 LLGLEPRDIDVVVNSHFHFDHCGGNKYFP-----HAKKICHRSEVPQA 123 (274)
T ss_dssp HTTCCGGGCCEEECSCCSGGGTTTGGGCT-----TSEEEEETTHHHHH
T ss_pred HcCCCHHHCCEEEecCcCcccCCchhhCC-----CCEEEECHHHHHHH
Confidence 77887889999999999999999999872 48999998776543
No 48
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.12 E-value=3.5e-11 Score=117.63 Aligned_cols=89 Identities=22% Similarity=0.341 Sum_probs=66.1
Q ss_pred ceEEEEecCCCCCC---------------------CcEEEEEE--CC---eEEEEeCCCCCCCCCCCCCCCccccccCCC
Q psy9964 3 EIKVTPLGAGQDVG---------------------RSCILVSM--GG---KNIMLDCGMHMGYHDDRKFPDFKFIAPQGP 56 (595)
Q Consensus 3 ~~~i~~lg~~~~~~---------------------~~~~~i~~--~~---~~~liD~G~~~~~~~~~~~~~~~~l~~~~~ 56 (595)
.|++++||++++.| .+||+|+. ++ ..+|||||.+.. ..+.+.++
T Consensus 28 ~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~----------~~l~~~~~ 97 (293)
T 3md7_A 28 CLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFR----------MQMIDSGV 97 (293)
T ss_dssp EEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHH----------HHHHHHTC
T ss_pred cEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHH----------HHHHhcCC
Confidence 48999999887432 27899984 44 699999996521 33444443
Q ss_pred CCCCccEEEeCCCChhhcCCcHHHHHhc---CCCccEEEcCccchhhHHH
Q psy9964 57 VTDMIDCLIISHFHLDHCGALPYFTEMF---GYAGPIYMTHPTKAIAPIL 103 (595)
Q Consensus 57 ~~~~i~~i~lTH~H~DH~~g~~~l~~~~---~~~~~v~~~~~~~~~~~~~ 103 (595)
.+|++||+||.|.||++|++.|.+.+ ...++||++..+...+...
T Consensus 98 --~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~ 145 (293)
T 3md7_A 98 --HMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDT 145 (293)
T ss_dssp --CCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHH
T ss_pred --CcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHh
Confidence 68999999999999999999887632 3468999998776655543
No 49
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.12 E-value=1.7e-11 Score=120.66 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=65.6
Q ss_pred CCceEEEEecCCCCCC-------------------------CcEEEEEECCeE-EEEeCCCCCCCCCCCCCCCcccccc-
Q psy9964 1 MSEIKVTPLGAGQDVG-------------------------RSCILVSMGGKN-IMLDCGMHMGYHDDRKFPDFKFIAP- 53 (595)
Q Consensus 1 m~~~~i~~lg~~~~~~-------------------------~~~~~i~~~~~~-~liD~G~~~~~~~~~~~~~~~~l~~- 53 (595)
|| |++++||++.+.| .+|++|+.+++. +|||||.+.. ..+.+
T Consensus 1 ~~-M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~----------~~l~~~ 69 (321)
T 3jxp_A 1 MM-MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIR----------AQLQAF 69 (321)
T ss_dssp -C-EEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHH----------HHHHTC
T ss_pred Ce-EEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHH----------HHHHhc
Confidence 54 9999999986432 368999877664 9999996521 11211
Q ss_pred ------CCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhhHH
Q psy9964 54 ------QGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIAPI 102 (595)
Q Consensus 54 ------~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~~~ 102 (595)
.+++..+|++||+||.|.||++|++.|.+. ..++||++..+...+..
T Consensus 70 ~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~--~~~~vy~~~~~~~~l~~ 122 (321)
T 3jxp_A 70 APMQPARALRDTGINAIVLLDSQIDHTTGLLSLREG--CPHQVWCTDMVHQDLTT 122 (321)
T ss_dssp GGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGG--CCEEEEECHHHHHHTTT
T ss_pred ccccccccCCcccCCEEEECCCChhhhhhHHHHHhc--CCCeEEECHHHHHHHHh
Confidence 123457899999999999999999999763 36899999887665543
No 50
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.06 E-value=6.1e-11 Score=116.22 Aligned_cols=86 Identities=17% Similarity=0.182 Sum_probs=66.7
Q ss_pred EEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcC
Q psy9964 6 VTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFG 85 (595)
Q Consensus 6 i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~ 85 (595)
++.+|..+ .|||+|..+++.+|||||.... .......+.+.++++.+|++||+||.|.||++|+..|.+..
T Consensus 47 v~~~~~~~---~n~~li~~~~~~iLID~G~~~~-----~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~- 117 (294)
T 3m8t_A 47 IYYVGTDG---IAVYVIKTSQGLILMDTAMPQS-----TGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET- 117 (294)
T ss_dssp EEECCCSS---SCCEEEEETTEEEEECCCCGGG-----HHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH-
T ss_pred EEEeCCCC---eEEEEEEECCceEEEECCCchh-----HHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc-
Confidence 45665543 5999999999999999996310 00234667777877778999999999999999999998864
Q ss_pred CCccEEEcCccchhhH
Q psy9964 86 YAGPIYMTHPTKAIAP 101 (595)
Q Consensus 86 ~~~~v~~~~~~~~~~~ 101 (595)
+++||+++.+...+.
T Consensus 118 -~~~v~~~~~~~~~~~ 132 (294)
T 3m8t_A 118 -GAQLVAGERDKPLLE 132 (294)
T ss_dssp -CCEEEEEGGGHHHHH
T ss_pred -CCEEEEChHHHHHHh
Confidence 589999988776544
No 51
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.05 E-value=4.5e-10 Score=107.90 Aligned_cols=86 Identities=19% Similarity=0.340 Sum_probs=63.8
Q ss_pred CCceEEEEecCC-CC--CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCc
Q psy9964 1 MSEIKVTPLGAG-QD--VGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGAL 77 (595)
Q Consensus 1 m~~~~i~~lg~~-~~--~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~ 77 (595)
|+...|+++..+ +. ...|||+|..+++.+|||||.+.. ...+ ++ +.+|++||+||.|.||++|+
T Consensus 1 ~~~~~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~---------~~~l---~~-~~~i~~vi~TH~H~DH~gg~ 67 (261)
T 3adr_A 1 MPCRGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNS---------IADF---SF-LDKLDYIVLTHLHIDHIGLL 67 (261)
T ss_dssp -CCCEEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTC---------CCCC---TT-CSCCCEEECSCCSGGGTTTH
T ss_pred CCCCCeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCC---------hhhc---CC-CCCCcEEEECCCCccccCCH
Confidence 556677777554 22 235899997668899999997532 1112 33 47899999999999999999
Q ss_pred HHHHHhcCCCccEEEcCccchhhH
Q psy9964 78 PYFTEMFGYAGPIYMTHPTKAIAP 101 (595)
Q Consensus 78 ~~l~~~~~~~~~v~~~~~~~~~~~ 101 (595)
+.+.+.+ +++||+++.+...+.
T Consensus 68 ~~l~~~~--~~~i~~~~~~~~~l~ 89 (261)
T 3adr_A 68 PELLQVY--KAKVLVKSGFKKYLT 89 (261)
T ss_dssp HHHHHHS--CCEEEEETTCTHHHH
T ss_pred HHHHHHh--CCeEEECHHHHHHhc
Confidence 9999865 589999998876543
No 52
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.03 E-value=6.1e-11 Score=114.10 Aligned_cols=85 Identities=15% Similarity=0.152 Sum_probs=64.5
Q ss_pred EEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcC
Q psy9964 6 VTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFG 85 (595)
Q Consensus 6 i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~ 85 (595)
++.+|.. +.|||+|..+++.+|||||.+.. .......+.+.++.+.+|++||+||.|.||++|+..|.+..
T Consensus 17 v~~i~~~---~~n~~li~~~~~~iLID~G~~~~-----~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~- 87 (263)
T 1k07_A 17 LYYVGTD---DLASYLIVTPRGNILINSDLEAN-----VPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT- 87 (263)
T ss_dssp EEECCBS---SBCCEEEEETTEEEEECCCCGGG-----HHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH-
T ss_pred EEEECCC---CeEEEEEEeCCceEEEECCCccc-----HHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc-
Confidence 3445443 35999999988999999996410 00123567777777778999999999999999999998864
Q ss_pred CCccEEEcCccchhh
Q psy9964 86 YAGPIYMTHPTKAIA 100 (595)
Q Consensus 86 ~~~~v~~~~~~~~~~ 100 (595)
+++||+++.+...+
T Consensus 88 -~~~v~~~~~~~~~~ 101 (263)
T 1k07_A 88 -KAKYMVMDEDVSVI 101 (263)
T ss_dssp -CCEEEEEHHHHHHH
T ss_pred -CCEEEEcHHHHHHH
Confidence 58999998766544
No 53
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.02 E-value=1.2e-10 Score=107.86 Aligned_cols=84 Identities=18% Similarity=0.272 Sum_probs=61.3
Q ss_pred ceEEEEecCCCCCCCcEEEEEE--CCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHH
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSM--GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYF 80 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~--~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l 80 (595)
+++.+..|.. +.|||+|.. +++.+|||||.... ...+.+.+.+. ++++||+||.|.||++|+..+
T Consensus 2 ~i~~~~~~~~---~~n~~li~~~~~~~~iLiD~G~~~~-------~l~~~l~~~g~---~i~~ii~TH~H~DH~gg~~~l 68 (210)
T 2xf4_A 2 NYRIIPVTAF---SQNCSLIWCEQTRLAALVDPGGDAE-------KIKQEVDASGV---TLMQILLTHGHLDHVGAASEL 68 (210)
T ss_dssp EEEEEEETTT---TEEEEEEECTTTCEEEEECCCSCHH-------HHHHHHHHHTC---EEEEEECSCSCHHHHTTHHHH
T ss_pred eEEEEeeCCc---ccEEEEEEecCCCcEEEEcCCCCHH-------HHHHHHHHcCC---ceeEEEECCCChhhhcCHHHH
Confidence 3555555443 469999984 67899999994310 12345555553 589999999999999999999
Q ss_pred HHhcCCCccEEEcCccchhhH
Q psy9964 81 TEMFGYAGPIYMTHPTKAIAP 101 (595)
Q Consensus 81 ~~~~~~~~~v~~~~~~~~~~~ 101 (595)
.+.+ +++||+++.+...+.
T Consensus 69 ~~~~--~~~v~~~~~~~~~~~ 87 (210)
T 2xf4_A 69 AQHY--GVPVIGPEKEDEFWL 87 (210)
T ss_dssp HHHH--TCCEECCCGGGHHHH
T ss_pred HHHc--CCcEEEecchHHHHh
Confidence 8865 489999988766543
No 54
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.00 E-value=9.1e-11 Score=113.31 Aligned_cols=77 Identities=17% Similarity=0.267 Sum_probs=60.5
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
+.|||+|..+++.+|||||.... .......+.+.++.+.+|++||+||.|.||++|+..|.+.+ +++||+++.
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~-----~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~--~~~v~~~~~ 109 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQM-----ASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT--GAKVAANAE 109 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGG-----HHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS--SCEEEECHH
T ss_pred CcEEEEEEeCCceEEEECCCCcc-----HHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc--CCeEEECHH
Confidence 34899999988999999996310 00234567777877778999999999999999999999864 589999877
Q ss_pred cchh
Q psy9964 96 TKAI 99 (595)
Q Consensus 96 ~~~~ 99 (595)
+...
T Consensus 110 ~~~~ 113 (269)
T 1sml_A 110 SAVL 113 (269)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 55
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=98.99 E-value=8.6e-11 Score=109.76 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=63.2
Q ss_pred eEEEEecCCCCC---------CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhc
Q psy9964 4 IKVTPLGAGQDV---------GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHC 74 (595)
Q Consensus 4 ~~i~~lg~~~~~---------~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~ 74 (595)
|++++++..+.+ ..|||+|..+++.+|||||.... .......+.+.++++.+|++||+||.|.||+
T Consensus 13 ~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~-----~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~ 87 (221)
T 1ztc_A 13 MELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSS-----MDELEEKFSELGISPDDITDVLFTHVHLDHI 87 (221)
T ss_dssp EEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGG-----HHHHHHHHHHHTCCGGGCCEEECSCCCHHHH
T ss_pred eeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcc-----hHHHHHHHHHcCCCHHHCcEEEEcCCccccC
Confidence 677777666532 35999999989999999996310 0023456777777778999999999999999
Q ss_pred CCcHHHHHhcCCCccEEEcCc
Q psy9964 75 GALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 75 ~g~~~l~~~~~~~~~v~~~~~ 95 (595)
+|++.|. +++||+++.
T Consensus 88 gg~~~~~-----~~~v~~~~~ 103 (221)
T 1ztc_A 88 FNSVLFE-----NATFYVHEV 103 (221)
T ss_dssp GGGGGCT-----TCEEEEEGG
T ss_pred CchhhCC-----CCEEEEeHH
Confidence 9998875 378999876
No 56
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.99 E-value=5.1e-10 Score=108.54 Aligned_cols=73 Identities=25% Similarity=0.259 Sum_probs=59.3
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
.+|||+|+.+++.+|||||.+. .....+.+.++++.+|++||+||.|.||++|++.+.+.++ +++||+++.
T Consensus 32 ~g~s~li~~~~~~iLiD~G~~~--------~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~-~~~v~~~~~ 102 (284)
T 2p4z_A 32 HGLSLLLKKGNKEIVVDTGQSE--------NFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERNP-EVKIYTHKE 102 (284)
T ss_dssp SSCEEEEEETTEEEEECCCSST--------HHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHCT-TCEEEEEGG
T ss_pred CEEEEEEEECCeEEEEeCCCCH--------HHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHcC-CCceecCHH
Confidence 3589999999999999999641 1234566667777899999999999999999999987654 689999887
Q ss_pred cc
Q psy9964 96 TK 97 (595)
Q Consensus 96 ~~ 97 (595)
+.
T Consensus 103 ~~ 104 (284)
T 2p4z_A 103 IL 104 (284)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 57
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=98.98 E-value=1.1e-10 Score=113.35 Aligned_cols=84 Identities=19% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCC---------CCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHH--hc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHD---------DRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTE--MF 84 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~---------~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~--~~ 84 (595)
+.|||+|..+++.+|||||.+..... .........+.+.++++.+|++||+||.|.||++|++.+.+ .+
T Consensus 47 ~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~f 126 (280)
T 3esh_A 47 PTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIF 126 (280)
T ss_dssp ECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSS
T ss_pred eEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCC
Confidence 34899999889999999997632100 01123456778888888899999999999999999999887 33
Q ss_pred CCCccEEEcCccchhh
Q psy9964 85 GYAGPIYMTHPTKAIA 100 (595)
Q Consensus 85 ~~~~~v~~~~~~~~~~ 100 (595)
+ +++||+++.+...+
T Consensus 127 p-~a~i~~~~~~~~~~ 141 (280)
T 3esh_A 127 E-NAIHVVQQDEWHEF 141 (280)
T ss_dssp T-TCEEEEEHHHHHHH
T ss_pred C-CCEEEECHHHHHHh
Confidence 3 68999998766543
No 58
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.95 E-value=1.7e-10 Score=113.46 Aligned_cols=80 Identities=23% Similarity=0.353 Sum_probs=62.8
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
+.|||+|..+++.+|||||.... .......+.+.++++.+|++||+||.|.||++|+..+.+.+ +++||++..
T Consensus 57 ~~~~~li~~~~~~iLiD~G~~~~-----~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v~~~~~ 129 (303)
T 4ax1_B 57 GISALLVTSDAGHILVDAATPQA-----GPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT--GAPVYARAP 129 (303)
T ss_dssp SSCCEEECCTTCEEEECCBSTTC-----HHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH--CCCEEEEHH
T ss_pred CceEEEEEeCCcEEEEECCCccc-----HHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc--CCEEEEcHH
Confidence 45999999888999999995311 11234567777777778999999999999999999999864 589999987
Q ss_pred cchhhHH
Q psy9964 96 TKAIAPI 102 (595)
Q Consensus 96 ~~~~~~~ 102 (595)
+...+..
T Consensus 130 ~~~~l~~ 136 (303)
T 4ax1_B 130 AIDTLKR 136 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7665443
No 59
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.93 E-value=2.9e-10 Score=108.47 Aligned_cols=81 Identities=22% Similarity=0.349 Sum_probs=61.6
Q ss_pred CceEEEEecCCCCCCCcEEEEEE-CCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHH
Q psy9964 2 SEIKVTPLGAGQDVGRSCILVSM-GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYF 80 (595)
Q Consensus 2 ~~~~i~~lg~~~~~~~~~~~i~~-~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l 80 (595)
..|+|+.+..++ +.|||+|.. +++++|||+|... .....+.+.++ +|++|++||.|.||++|+..|
T Consensus 6 g~m~i~~i~~~~--~n~~yli~~~~~~~vlID~G~~~--------~i~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l 72 (258)
T 2qed_A 6 GSMNLNSIPAFQ--DNYIWVLTNDEGRCVIVDPGEAA--------PVLKAIAEHKW---MPEAIFLTHHHHDHVGGVKEL 72 (258)
T ss_dssp -CCEEEEEEETT--TEEEEEEECTTSEEEEECCSCHH--------HHHHHHHHHTC---EEEEEECCSCCHHHHTTHHHH
T ss_pred CccEEEEecccC--ceEEEEEEECCCcEEEEeCCCcH--------HHHHHHHHcCC---CCCEEEeCCCCccccCCHHHH
Confidence 357888887554 345999987 5789999999420 23456666663 799999999999999999999
Q ss_pred HHhcCCCccEEEcCcc
Q psy9964 81 TEMFGYAGPIYMTHPT 96 (595)
Q Consensus 81 ~~~~~~~~~v~~~~~~ 96 (595)
.+.++ +++||+++.+
T Consensus 73 ~~~~~-~~~v~~~~~~ 87 (258)
T 2qed_A 73 LQHFP-QMTVYGPAET 87 (258)
T ss_dssp HHHCT-TCEEEECGGG
T ss_pred HHHCC-CCEEEecccc
Confidence 98654 4899998654
No 60
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.92 E-value=3.9e-10 Score=105.85 Aligned_cols=81 Identities=12% Similarity=0.106 Sum_probs=60.0
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcC
Q psy9964 15 VGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTH 94 (595)
Q Consensus 15 ~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~ 94 (595)
.+.|||+|..+++.+|||||.+... .....+.+.+. .+.+|++||+||.|.||++|+..+.+ .+++||+++
T Consensus 21 ~~~n~~li~~~~~~iLiD~G~~~~~----~~~~~~~l~~~--~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~ 91 (227)
T 3iog_A 21 VQENSMVYFGAKGVTVVGATWTPDT----ARELHKLIKRV--SRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVVSTR 91 (227)
T ss_dssp SCEEEEEEECSSCEEEESCCSSHHH----HHHHHHHHHTT--CCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEH
T ss_pred ccCcEEEEEeCCeEEEEECCCChHH----HHHHHHHHHHh--cCCCeEEEEeCCCchhhcChHHHHhh---CCCeEEECH
Confidence 4569999998888999999953110 00122344442 34789999999999999999999886 369999999
Q ss_pred ccchhhHHHH
Q psy9964 95 PTKAIAPILL 104 (595)
Q Consensus 95 ~~~~~~~~~l 104 (595)
.+...+....
T Consensus 92 ~~~~~~~~~~ 101 (227)
T 3iog_A 92 QTRDLMKSDW 101 (227)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8887766543
No 61
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.91 E-value=7.7e-10 Score=120.32 Aligned_cols=72 Identities=22% Similarity=0.386 Sum_probs=62.2
Q ss_pred ceecEEEECCChHHHHHHHHHhc-----CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ-----NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHI 583 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~-----~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~ 583 (595)
..+||+||||||+|+++|+.|++ . |++|+|+|+.+... ..+|+.+|+++++++|+++|+|+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~----Gi~v~viE~~~~~~--------~~gra~~l~~~tle~l~~lGl~~~l 74 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP----DLKVRIIDKRSTKV--------YNGQADGLQCRTLESLKNLGLADKI 74 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST----TCCEEEECSSSSCC--------CSCSCCEECHHHHHHHHTTTCHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC----CCCEEEEeCCCCCC--------CCCceeEEChHHHHHHHHCCCHHHH
Confidence 46899999999999999999999 8 99999999986322 3789999999999999999999998
Q ss_pred cccccccccc
Q psy9964 584 ESTRTCTVDN 593 (595)
Q Consensus 584 ~~~~~~~~~~ 593 (595)
.+ .+.++..
T Consensus 75 ~~-~~~~~~~ 83 (665)
T 1pn0_A 75 LS-EANDMST 83 (665)
T ss_dssp HT-TCBCCCE
T ss_pred HH-hccccce
Confidence 76 5555544
No 62
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.91 E-value=6.7e-10 Score=107.63 Aligned_cols=81 Identities=22% Similarity=0.298 Sum_probs=60.6
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCC-CCC----------------CCCccccccCCCCCCCccEEEeCCCChhhcCCcHH
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHD-DRK----------------FPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPY 79 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~-~~~----------------~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~ 79 (595)
.|||+|+.+++.+|||||.+..... ... ......+.+.++.+.+|++||+||.|.||++|+..
T Consensus 43 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~ 122 (276)
T 2r2d_A 43 VSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEY 122 (276)
T ss_dssp EEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGG
T ss_pred eEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhh
Confidence 4899999888899999997643210 000 12235677778888899999999999999999998
Q ss_pred HHHhcCCCccEEEcCccchhhHH
Q psy9964 80 FTEMFGYAGPIYMTHPTKAIAPI 102 (595)
Q Consensus 80 l~~~~~~~~~v~~~~~~~~~~~~ 102 (595)
| .+++||+++.+...+..
T Consensus 123 ~-----~~~~v~~~~~~~~~~~~ 140 (276)
T 2r2d_A 123 F-----GKSRLIAHEDEFATAVR 140 (276)
T ss_dssp C-----SSSEEEEEHHHHHHHHH
T ss_pred C-----CCCEEEECHHHHHHHhc
Confidence 7 25899999877654433
No 63
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=98.90 E-value=1.1e-09 Score=108.40 Aligned_cols=82 Identities=15% Similarity=0.234 Sum_probs=63.1
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
..|||+|..+++.+|||||.+.. .........+++.++.+.+|++||+||.|.||++|+..|.+. +++||+++.
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~---~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~ 94 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTR---AARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEE 94 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSH---HHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGG
T ss_pred cEEEEEEEcCCceEEEECCCCCH---HHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHH
Confidence 35999999888999999996521 000012245666777667899999999999999999999984 589999999
Q ss_pred cchhhHHH
Q psy9964 96 TKAIAPIL 103 (595)
Q Consensus 96 ~~~~~~~~ 103 (595)
+...+...
T Consensus 95 ~~~~~~~~ 102 (317)
T 2zo4_A 95 EFARGHRF 102 (317)
T ss_dssp GTTTHHHH
T ss_pred HHHHHHhh
Confidence 87766543
No 64
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.90 E-value=5.1e-10 Score=117.16 Aligned_cols=83 Identities=13% Similarity=0.112 Sum_probs=63.4
Q ss_pred CCceEEEEecCCCCCCCcEEEE--EECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcH
Q psy9964 1 MSEIKVTPLGAGQDVGRSCILV--SMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALP 78 (595)
Q Consensus 1 m~~~~i~~lg~~~~~~~~~~~i--~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~ 78 (595)
||.++.+..|+.+ .|||+| ..+++++|||+|.... .....+.+.+ .+|++||+||.|.||++|+.
T Consensus 3 ~m~i~~~~~~~~~---~n~yli~~~~~~~~ilID~g~~~~-------~~~~~l~~~~---~~i~~Il~TH~H~DH~gg~~ 69 (474)
T 3tp9_A 3 AMYLRRFYDEGLA---HASYLVGCQETGEACVIDPARDVE-------PYLLTAKREG---LRIVAALETHIHADFVSGAR 69 (474)
T ss_dssp CEEEEEEEETTTT---EEEEEEEETTTCEEEEESCCSCCH-------HHHHHHHHHT---CEEEEEECSSCCSSSCCCHH
T ss_pred ceEEEEEecCCce---eEEEEEEECCCCEEEEEcCCCChH-------HHHHHHHHcC---CeeEEEEcCcCchhhhCCHH
Confidence 5555666666644 599999 4567899999995421 2345666666 37999999999999999999
Q ss_pred HHHHhcCCCccEEEcCccch
Q psy9964 79 YFTEMFGYAGPIYMTHPTKA 98 (595)
Q Consensus 79 ~l~~~~~~~~~v~~~~~~~~ 98 (595)
.|.+.+ +++||+++.+..
T Consensus 70 ~l~~~~--~~~i~~~~~~~~ 87 (474)
T 3tp9_A 70 EMADRA--GAAICVSDEGPP 87 (474)
T ss_dssp HHHHHH--CCEEEEECCSCG
T ss_pred HHHHHH--CCcEEEcCcchh
Confidence 999865 589999988654
No 65
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.88 E-value=1e-09 Score=112.81 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=58.8
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCccccccc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIEST 586 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~~ 586 (595)
.++.+||+|||||++|+++|+.|++. |++|+|+|+.+... ..+++..+++.++++|+++|+|+.+.+
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~----G~~V~v~E~~~~~~--------~~~~~~~l~~~~~~~l~~lg~~~~~~~- 86 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQS----GIDCDVYEAVKEIK--------PVGAAISVWPNGVKCMAHLGMGDIMET- 86 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSCC------------CEEEECHHHHHHHHHTTCHHHHHH-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC--------CcCeeEEECHHHHHHHHHCCCHHHHHh-
Confidence 34578999999999999999999999 99999999987432 257889999999999999999998866
Q ss_pred cccccc
Q psy9964 587 RTCTVD 592 (595)
Q Consensus 587 ~~~~~~ 592 (595)
...++.
T Consensus 87 ~~~~~~ 92 (407)
T 3rp8_A 87 FGGPLR 92 (407)
T ss_dssp HSCCCC
T ss_pred hcCCCc
Confidence 444543
No 66
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.88 E-value=9.5e-10 Score=103.62 Aligned_cols=87 Identities=14% Similarity=0.096 Sum_probs=61.4
Q ss_pred EecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCC
Q psy9964 8 PLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYA 87 (595)
Q Consensus 8 ~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~ 87 (595)
.+.++...+.|||+|..+++.+|||||.+.... ......+.+.. ..+|++||+||.|.||++|+..|.+ .+
T Consensus 17 ~i~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~----~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~~~~---~~ 87 (233)
T 3q6v_A 17 IVEDKEYVQENSMVYIGTDGITIIGATWTPETA----ETLYKEIRKVS--PLPINEVINTNYHTDRAGGNAYWKT---LG 87 (233)
T ss_dssp EEEECSSSCEEEEEEECSSCEEEESCCSSHHHH----HHHHHHHHHHC--CCCEEEEECSSSSHHHHTTHHHHHH---TT
T ss_pred EEeCCCcCCCcEEEEEeCCeEEEEECCCCHHHH----HHHHHHHHHhc--CCCcEEEEECCCChhhhChHHHHhh---CC
Confidence 343333345699999988899999999642100 01123333322 3689999999999999999999985 26
Q ss_pred ccEEEcCccchhhHHH
Q psy9964 88 GPIYMTHPTKAIAPIL 103 (595)
Q Consensus 88 ~~v~~~~~~~~~~~~~ 103 (595)
++||+++.+...+...
T Consensus 88 ~~v~~~~~~~~~~~~~ 103 (233)
T 3q6v_A 88 AKIVATQMTYDLQKSQ 103 (233)
T ss_dssp CEEEEEHHHHHHHHHH
T ss_pred CEEEEcHHHHHHHHhh
Confidence 9999998887766553
No 67
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.87 E-value=4.4e-10 Score=113.99 Aligned_cols=81 Identities=19% Similarity=0.168 Sum_probs=61.3
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
-|||||..+++.+|||+|.... .-..++.|++. +++.+|++||+||.|.||+|+++.+.+.++.+++||+++..
T Consensus 52 yNsYLI~~~~~~vLIDtg~~~~-----~~~~l~~l~~~-i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~ 125 (410)
T 4dik_A 52 YNAYLVKLNGANVLIDGWKGNY-----AKEFIDALSKI-VDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFG 125 (410)
T ss_dssp EEEEEEECSSCEEEECCCCGGG-----HHHHHHHHTTT-SCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHH
T ss_pred EEEEEEEECCeEEEEeCCCcch-----HHHHHHHHHHh-cCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHH
Confidence 3999998888999999995310 00122344443 45678999999999999999999999877667899999887
Q ss_pred chhhHHH
Q psy9964 97 KAIAPIL 103 (595)
Q Consensus 97 ~~~~~~~ 103 (595)
..+++..
T Consensus 126 ~~~l~~~ 132 (410)
T 4dik_A 126 KRLLEGF 132 (410)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7665543
No 68
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=98.86 E-value=9.9e-10 Score=107.52 Aligned_cols=91 Identities=18% Similarity=0.193 Sum_probs=62.6
Q ss_pred CceEEEEecCCCCCCCcEEEEEE--CCeEEEEeCCCCCCCCC-----CCCCCCccccccCCCCCCCccEEEeCCCChhhc
Q psy9964 2 SEIKVTPLGAGQDVGRSCILVSM--GGKNIMLDCGMHMGYHD-----DRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHC 74 (595)
Q Consensus 2 ~~~~i~~lg~~~~~~~~~~~i~~--~~~~~liD~G~~~~~~~-----~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~ 74 (595)
|.++.++.+.. +.|||+|.+ +++++|||+|....... .........+++.++ +|++||+||.|.||+
T Consensus 5 m~i~~~~~~~~---~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~---~i~~Il~TH~H~DH~ 78 (298)
T 4efz_A 5 MTVEGFFDPAT---CTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGA---RVRWLLETHVHADHL 78 (298)
T ss_dssp CEEEEEECTTT---CBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTC---EEEEEECSSCCSSSB
T ss_pred eEEEEEecCCc---ccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCC---cceEEEECCCchhhh
Confidence 34444444443 459999986 56799999995311000 000023455666663 599999999999999
Q ss_pred CCcHHHHHhcCCCccEEEcCccchhh
Q psy9964 75 GALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 75 ~g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
+|+..|.+.+ +++||+++......
T Consensus 79 gg~~~l~~~~--~a~i~~~~~~~~~~ 102 (298)
T 4efz_A 79 SAAPYLKTRV--GGEIAIGRHVTRVQ 102 (298)
T ss_dssp CCHHHHHHHH--CCEEEEETTHHHHH
T ss_pred hhHHHHHHHh--CCcEEEChhHHHHH
Confidence 9999999976 58999998866543
No 69
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.86 E-value=2.7e-09 Score=113.77 Aligned_cols=72 Identities=22% Similarity=0.319 Sum_probs=61.7
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIESTR 587 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~~~ 587 (595)
+..+||+||||||+|+++|+.|++. |++|+|+|+.+... ..+|+..+++.++++|+++|+|+.+.+ .
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~----G~~v~viEr~~~~~--------~~~~~~~l~~~~~~~l~~lGl~~~~~~-~ 69 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQ----GVRVLVVERRPGLS--------PYPRAAGQNPRTMELLRIGGVADEVVR-A 69 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSSSCC--------CCCCSCCBCHHHHHHHHHTTCHHHHHH-S
T ss_pred CccCcEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC--------CCCccceECHHHHHHHHHcCCHHHHHh-h
Confidence 3568999999999999999999999 99999999987432 267899999999999999999998876 4
Q ss_pred ccccc
Q psy9964 588 TCTVD 592 (595)
Q Consensus 588 ~~~~~ 592 (595)
..+..
T Consensus 70 ~~~~~ 74 (535)
T 3ihg_A 70 DDIRG 74 (535)
T ss_dssp CCSSC
T ss_pred CCCcc
Confidence 44443
No 70
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.84 E-value=6e-10 Score=110.67 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=59.7
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHH-HHhcCCCccEEEcCc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYF-TEMFGYAGPIYMTHP 95 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l-~~~~~~~~~v~~~~~ 95 (595)
.|||+|+.+++.||||||.+..... ..-.....+.+.++.+.+|++||+||.|.||++|+..+ .+.++ +++||+++.
T Consensus 97 ~n~~LI~~~~~~iLIDtG~~~~~~~-~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp-~a~v~~~~~ 174 (331)
T 1p9e_A 97 VTGYLVNTGSKLVLVDTGAAGLFGP-TLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFP-NAVVRADQK 174 (331)
T ss_dssp EEEEEEECSSCEEEECCCCTTSSCT-TCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESST-TCEEECBHH
T ss_pred EEEEEEEECCEEEEEECCCCCcCCc-chhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCC-CCEEEECHH
Confidence 3699999888999999997632111 11124467778888888999999999999999999843 22233 689999887
Q ss_pred cchh
Q psy9964 96 TKAI 99 (595)
Q Consensus 96 ~~~~ 99 (595)
+...
T Consensus 175 ~~~~ 178 (331)
T 1p9e_A 175 EADF 178 (331)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 71
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.84 E-value=2.9e-09 Score=112.02 Aligned_cols=67 Identities=16% Similarity=0.286 Sum_probs=59.0
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
..+.+||+||||||+|+++|+.|++. |++|+|+|+.+... ..+|+.+++++++++|+++|+|+.+.+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~~--------~~~r~~~l~~~~~~~l~~lGl~~~~~~ 74 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA----GVEVVVLERLVERT--------GESRGLGFTARTMEVFDQRGILPRFGE 74 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCCC-C--------CCCCSEEECHHHHHHHHTTTCGGGGCS
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC--------CCCCcceECHHHHHHHHHCCCHHHHHh
Confidence 34578999999999999999999998 99999999987432 257899999999999999999998865
No 72
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.84 E-value=2.9e-09 Score=111.93 Aligned_cols=66 Identities=17% Similarity=0.342 Sum_probs=58.5
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
.+.+||+||||||+|+++|+.|++. |++|+|+|+.+... ..+|+..+++.++++|+++|+|+.+.+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~----G~~v~vlE~~~~~~--------~~~r~~~l~~~~~~~l~~lGl~~~~~~ 75 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG----GVDVMVLEQLPQRT--------GESRGLGFTARTMEVFDQRGILPAFGP 75 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCSSCC--------CCCCSEEECHHHHHHHHHTTCGGGGCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCC--------CCCceeEECHHHHHHHHHCCCHHHHHh
Confidence 4568999999999999999999998 99999999987432 267999999999999999999998865
No 73
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.83 E-value=1.3e-09 Score=104.09 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=52.2
Q ss_pred cEEEEEEC--CeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 18 SCILVSMG--GKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 18 ~~~~i~~~--~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
|||+|..+ ++++|||+|.. ......+.+.++ +|++||+||.|.||++|+..|.+.++ +++||++..
T Consensus 13 ~~yli~~~~~~~~vlID~G~~--------~~i~~~l~~~g~---~i~~IllTH~H~DH~gg~~~l~~~~~-~~~v~~~~~ 80 (260)
T 1qh5_A 13 YMYLVIDDETKEAAIVDPVQP--------QKVVDAARKHGV---KLTTVLTTHHHWDHAGGNEKLVKLES-GLKVYGGDD 80 (260)
T ss_dssp EEEEEEETTTTEEEEESCSSH--------HHHHHHHHHHTC---EEEEEECCCSSHHHHTTHHHHHHHST-TCEEEESCT
T ss_pred EEEEEEECCCCEEEEEcCCCH--------HHHHHHHHHcCC---CccEEEeCCCCccccCCHHHHHHHCC-CCEEEECcc
Confidence 59999874 68999999932 023456666664 59999999999999999999998764 589999864
No 74
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.81 E-value=3.3e-09 Score=113.12 Aligned_cols=65 Identities=23% Similarity=0.345 Sum_probs=56.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
+.+||+||||||+|+++|+.|++. |++|+|||+.+... ..+|+.+|++.++++|+++|+|+.+.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~----G~~V~VlEr~~~~~--------~~~r~~~l~~~s~~~l~~lGl~~~l~~ 112 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG----GVGALVLEKLVEPV--------GHDRAGALHIRTVETLDLRGLLDRFLE 112 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT----TCCEEEEBSCSSCC--------CSSSCCCBCHHHHHHHHTTTCHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEcCCCCCC--------CCceEEEECHHHHHHHHHcCChHHHHh
Confidence 468999999999999999999999 99999999987432 368999999999999999999998865
No 75
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.81 E-value=1.2e-09 Score=107.34 Aligned_cols=78 Identities=17% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCcEEEE-EECCeEEEEeCCCCCCCCCCCCCCCccccccCCC-CCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEc
Q psy9964 16 GRSCILV-SMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGP-VTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMT 93 (595)
Q Consensus 16 ~~~~~~i-~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~-~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~ 93 (595)
..|||+| ..+++.+|||||.+.. .. .....+.+. + ...+|++||+||.|.||++|+..+.+.++ +++||++
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~--~~---~~~~~l~~~-~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~-~a~v~~~ 95 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRD--AE---LVWADLCRW-VADPSQVHYWLITHKHYDHCGLLPYLCPRLP-NVQVLAS 95 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGG--HH---HHHHHHHHH-CSCGGGEEEEECCCCSTTTTTTHHHHGGGCT-TCEEEEE
T ss_pred CceEEEEEeCCCceEEEECCCCCc--HH---HHHHHHHHH-hcCcccceEEEeccCCccccCCHHHHHHhCC-CCeEEEC
Confidence 3599999 4788999999996410 00 011233332 1 34789999999999999999999998654 6899999
Q ss_pred Cccchhh
Q psy9964 94 HPTKAIA 100 (595)
Q Consensus 94 ~~~~~~~ 100 (595)
+.+...+
T Consensus 96 ~~~~~~~ 102 (303)
T 2vw8_A 96 ERTCQAW 102 (303)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8766544
No 76
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.81 E-value=1.3e-09 Score=103.16 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=60.0
Q ss_pred CceEEEEecCCCCCCCcEEEEEEC----CeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCc
Q psy9964 2 SEIKVTPLGAGQDVGRSCILVSMG----GKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGAL 77 (595)
Q Consensus 2 ~~~~i~~lg~~~~~~~~~~~i~~~----~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~ 77 (595)
|+|.+..+-... .+.|||+|..+ ++++|||+|.... ......+++.+. +|++||+||.|.||++|+
T Consensus 1 ~~m~~~~~~~~~-~~~~~yli~~~~~~~~~~ilID~g~~~~------~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~ 70 (245)
T 2gcu_A 1 MKLLFRQLFENE-SSTFTYLLADVSHPDKPALLIDPVDKTV------DRDLKLIDELGL---KLIYAMNTHVHADHVTGT 70 (245)
T ss_dssp CCEEEEEEEETT-TTEEEEEEEETTSTTCEEEEESCBGGGH------HHHHHHHHHHTC---EEEEEECSSCCSSSCBSH
T ss_pred CCcEEEEeecCC-CceEEEEEEcCCCCCCcEEEEeCCCchH------HHHHHHHHHCCC---eeeEEEeCCCChhhhhhH
Confidence 346666653322 24589999874 6899999995310 012345666663 599999999999999999
Q ss_pred HHHHHhcCCCccEEEcCcc
Q psy9964 78 PYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 78 ~~l~~~~~~~~~v~~~~~~ 96 (595)
..|.+.+. +++||+++.+
T Consensus 71 ~~l~~~~~-~~~v~~~~~~ 88 (245)
T 2gcu_A 71 GLLKTKLP-GVKSVISKAS 88 (245)
T ss_dssp HHHHHHST-TCEEEEEGGG
T ss_pred HHHHHhCC-CCeEEecccc
Confidence 99988443 6899998764
No 77
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.81 E-value=1.5e-09 Score=112.97 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=61.5
Q ss_pred CCceEEEEecCCCCCCCcEEEEEE--CCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcH
Q psy9964 1 MSEIKVTPLGAGQDVGRSCILVSM--GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALP 78 (595)
Q Consensus 1 m~~~~i~~lg~~~~~~~~~~~i~~--~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~ 78 (595)
||.++.++.+..+ .|||+|.+ +++++|||+|.... .....+.+.+ .+|++||+||.|.||++|+.
T Consensus 24 ~m~i~~~~~~~~~---~nsyli~~~~~~~~vlID~g~~~~-------~~~~~l~~~g---~~i~~Il~TH~H~DH~gg~~ 90 (466)
T 3r2u_A 24 AMFFKQFYDKHLS---QASYLIGCQKTGEAMIIDPIRDLS-------SYIRVADEEG---LTITHAAETHIHADFASGIR 90 (466)
T ss_dssp CEEEEEEEETTTT---EEEEEEEETTTCEEEEESCCSCCH-------HHHHHHHHHT---CEEEEEECSSCCSSSCCCHH
T ss_pred CeEEEEEecCCcc---ceEEEEEeCCCCEEEEEcCCCCHH-------HHHHHHHHCC---CeeeEEEECCCChhhhccHH
Confidence 4445556555544 49999964 67899999994311 2345566666 36999999999999999999
Q ss_pred HHHHhcCCCccEEEcCccc
Q psy9964 79 YFTEMFGYAGPIYMTHPTK 97 (595)
Q Consensus 79 ~l~~~~~~~~~v~~~~~~~ 97 (595)
.|.+.+ +++||+++...
T Consensus 91 ~l~~~~--~a~v~~~~~~~ 107 (466)
T 3r2u_A 91 DVAIKL--NANIYVSGESD 107 (466)
T ss_dssp HHHHHH--CCEEEEECCSC
T ss_pred HHHHhh--CCeEEECcchh
Confidence 999976 58999998754
No 78
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.80 E-value=1.9e-09 Score=102.56 Aligned_cols=68 Identities=15% Similarity=0.217 Sum_probs=53.1
Q ss_pred cEEEEEEC--CeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 18 SCILVSMG--GKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 18 ~~~~i~~~--~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
|||+|..+ +..+|||+|... .....+.+.+ .+|++||+||.|.||++|+..|.+.+ +++||+++.
T Consensus 13 ~~yli~~~~~~~~~lID~g~~~--------~i~~~l~~~g---~~i~~Il~TH~H~DH~gg~~~l~~~~--~~~v~~~~~ 79 (254)
T 1xm8_A 13 YAYILHDEDTGTVGVVDPSEAE--------PIIDSLKRSG---RNLTYILNTHHHYDHTGGNLELKDRY--GAKVIGSAM 79 (254)
T ss_dssp EEEEEECTTTCCEEEECCSSHH--------HHHHHHHHHT---CCCCEEECSSCCHHHHTTHHHHHHHH--CCEEEEEGG
T ss_pred EEEEEEECCCCEEEEEeCCCHH--------HHHHHHHHcC---CCccEEEECCCCCcccccHHHHHHHc--CCeEEEchh
Confidence 49999864 579999998320 2345666665 47999999999999999999999866 489999876
Q ss_pred cch
Q psy9964 96 TKA 98 (595)
Q Consensus 96 ~~~ 98 (595)
+..
T Consensus 80 ~~~ 82 (254)
T 1xm8_A 80 DKD 82 (254)
T ss_dssp GGG
T ss_pred hhh
Confidence 543
No 79
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.80 E-value=7.1e-10 Score=105.22 Aligned_cols=76 Identities=16% Similarity=0.288 Sum_probs=56.8
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccC-CCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEc
Q psy9964 15 VGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQ-GPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMT 93 (595)
Q Consensus 15 ~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~-~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~ 93 (595)
.+.|||+|..+++.+|||||.... ........+.+. + .+|++||+||.|.||++|+..|.+. +++||++
T Consensus 46 ~~~n~~li~~~~~~iLID~G~~~~----~~~~l~~~l~~~~~---~~i~~vi~TH~H~DH~gg~~~l~~~---~~~v~~~ 115 (243)
T 4hl2_A 46 VASNGLIVRDGGRVLVVDTAWTDD----QTAQILNWIKQEIN---LPVALAVVTHAHQDKMGGMDALHAA---GIATYAN 115 (243)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHH----HHHHHHHHHHHHTC---CCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEE
T ss_pred ccceEEEEEECCcEEEEECCCCCc----cHHHHHHHHHHhhC---CCeeEEEECCCCccccCCHHHHHhC---CCeEEEC
Confidence 346999999999999999995310 000123445554 4 4699999999999999999999883 6899999
Q ss_pred Cccchhh
Q psy9964 94 HPTKAIA 100 (595)
Q Consensus 94 ~~~~~~~ 100 (595)
+.+...+
T Consensus 116 ~~~~~~~ 122 (243)
T 4hl2_A 116 ALSNQLA 122 (243)
T ss_dssp HHHHHHG
T ss_pred HHHHHHH
Confidence 8765443
No 80
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.78 E-value=1e-09 Score=105.72 Aligned_cols=75 Identities=13% Similarity=0.241 Sum_probs=55.3
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
..|||+|..+++++|||+|.+.. .....++.+++..- .+|++||+||.|.||++|+..|.+. ++++|+++.
T Consensus 74 ~~N~ylv~~~~~~ilIDtg~~~~----~~~~l~~~i~~~~~--~~I~~Ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~ 144 (270)
T 4eyb_A 74 ASNGLIVRDGGRVLVVDTAWTDD----QTAQILNWIKQEIN--LPVALAVVTHAHQDKMGGMDALHAA---GIATYANAL 144 (270)
T ss_dssp EEEEEEEEETTEEEEESCCSSHH----HHHHHHHHHHHHTC--CCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHH
T ss_pred ceEEEEEEECCEEEEEeCCCCHH----HHHHHHHHHHHhcC--CceEEEEeCCCChhhcCcHHHHHHC---CCeEEECHH
Confidence 35999999999999999996411 00012344443321 5799999999999999999999883 589999876
Q ss_pred cchh
Q psy9964 96 TKAI 99 (595)
Q Consensus 96 ~~~~ 99 (595)
+...
T Consensus 145 ~~~~ 148 (270)
T 4eyb_A 145 SNQL 148 (270)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 81
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.77 E-value=6.9e-09 Score=110.65 Aligned_cols=93 Identities=17% Similarity=0.344 Sum_probs=65.7
Q ss_pred ceEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCC------------------CCCCccccccCCCCCCCccEE
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDR------------------KFPDFKFIAPQGPVTDMIDCL 64 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~------------------~~~~~~~l~~~~~~~~~i~~i 64 (595)
.++|+++..+.. .++|++|+.+++.+|||||......... .....++|.+.++ .+|++|
T Consensus 5 ~~~I~~ldvG~g-qg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi--~~id~v 81 (547)
T 2bib_A 5 GNKIHFINVQEG-GSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSV--QKLDFI 81 (547)
T ss_dssp CEEEEEECBSSS-BCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTC--CCBSCE
T ss_pred CceEEEEEcCCC-CceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCc--ccccEE
Confidence 478888876531 2489999998999999999752111000 0012345666665 679999
Q ss_pred EeCCCChhhcCCcHHHHHhcCCCccEEEcCccchh
Q psy9964 65 IISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAI 99 (595)
Q Consensus 65 ~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~ 99 (595)
|+||.|.||++|++.|.+.++ ..+||++......
T Consensus 82 ilTH~H~DHiggl~~l~~~~~-~~~i~~~~~~~~~ 115 (547)
T 2bib_A 82 LVTHTHSDHIGNVDELLSTYP-VDRVYLKKYSDSR 115 (547)
T ss_dssp ECCCSCHHHHTTHHHHHHHSC-BSEEECCCCCGGG
T ss_pred EEcCCCccccCCHHHHHHhCC-ccEEEECcccccc
Confidence 999999999999999998765 2369988765543
No 82
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.76 E-value=2e-09 Score=100.30 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=55.9
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
..|||+|..+++.+|||||.... ........+.+.. ..+|++||+||.|.||++|++.|.+ + +++||+++.
T Consensus 30 ~~n~~li~~~~~~iLiD~G~~~~----~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~l~~-~--~~~v~~~~~ 100 (219)
T 3l6n_A 30 SANSMYLVTKKGVVLFDVPWEKV----QYQSLMDTIKKRH--NLPVVAVFATHSHDDRAGDLSFFNN-K--GIKTYATAK 100 (219)
T ss_dssp EEEEEEEEETTEEEEESCCSSGG----GHHHHHHHHHHHH--SCCEEEEECSSSSTTTTCCTHHHHH-T--TCEEEECHH
T ss_pred cceEEEEEeCCEEEEEeCCCChH----HHHHHHHHHHHhc--CCceeEEEecCCCcccccCHHHHHh-C--CCEEEEcHH
Confidence 35999999999999999996411 0001223333311 1579999999999999999999987 3 689999987
Q ss_pred cchhhH
Q psy9964 96 TKAIAP 101 (595)
Q Consensus 96 ~~~~~~ 101 (595)
+...+.
T Consensus 101 ~~~~~~ 106 (219)
T 3l6n_A 101 TNEFLK 106 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 83
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.76 E-value=4.4e-09 Score=108.17 Aligned_cols=66 Identities=20% Similarity=0.316 Sum_probs=56.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCce-EEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLS-ILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~-v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
|..+||+||||||+|+++|+.|++. |++ |+|+|+.+... ..+++..+++.++++|+++|+|+.+..
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~----G~~~v~v~E~~~~~~--------~~g~g~~l~~~~~~~l~~lg~~~~l~~ 68 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQA----GIGKVTLLESSSEIR--------PLGVGINIQPAAVEALAELGLGPALAA 68 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT----TCSEEEEEESSSSCC--------CCSCEEEECHHHHHHHHHTTCHHHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCCCcc--------cceeEEEEChHHHHHHHHCCChHHHHh
Confidence 3468999999999999999999998 999 99999877432 256888999999999999999988765
No 84
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.76 E-value=4.7e-09 Score=102.93 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=57.1
Q ss_pred eEEEEecCCCCCCCcEEEEEE--CCeEEEEeCCCCCCCCCCCCCCCccccccC----CC--CCCCccEEEeCCCChhhcC
Q psy9964 4 IKVTPLGAGQDVGRSCILVSM--GGKNIMLDCGMHMGYHDDRKFPDFKFIAPQ----GP--VTDMIDCLIISHFHLDHCG 75 (595)
Q Consensus 4 ~~i~~lg~~~~~~~~~~~i~~--~~~~~liD~G~~~~~~~~~~~~~~~~l~~~----~~--~~~~i~~i~lTH~H~DH~~ 75 (595)
|+|+.+...+ +.|||+|.. +++++|||||.... .....+.+. ++ .+.+|++||+||.|.||++
T Consensus 29 m~i~~i~~~~--~n~~ylI~~~~~~~~ilID~G~~~~-------~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~g 99 (311)
T 2p18_A 29 FSVTVVPTLK--DNFSYLINDHTTHTLAAVDVNADYK-------PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSG 99 (311)
T ss_dssp EEEEEEEETT--TEEEEEEEETTTTEEEEESCCSCCH-------HHHHHHHHTC--------CCEEEEEEESSSSHHHHT
T ss_pred cEEEEEecCC--CcEEEEEEeCCCCcEEEEeCCCChH-------HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccC
Confidence 5666664433 235999988 57899999984311 123445444 42 1357999999999999999
Q ss_pred CcHHHHHhcCC-----CccEEEcCcc
Q psy9964 76 ALPYFTEMFGY-----AGPIYMTHPT 96 (595)
Q Consensus 76 g~~~l~~~~~~-----~~~v~~~~~~ 96 (595)
|+..|.+.++. +++||++..+
T Consensus 100 g~~~l~~~~~~~~~~~~~~v~~~~~~ 125 (311)
T 2p18_A 100 GNAKLKAELEAMNSTVPVVVVGGAND 125 (311)
T ss_dssp THHHHHHHHHSCC--CCCEEEEEGGG
T ss_pred CHHHHHHhhhhcccCCCCEEEEechh
Confidence 99999986521 3788887643
No 85
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.76 E-value=2e-09 Score=110.49 Aligned_cols=79 Identities=27% Similarity=0.248 Sum_probs=59.0
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
+.|||+|. +++.+|||||.... .......+.+. +.+.+|++||+||.|.||++|++.+.+.++ +++||+++.
T Consensus 34 ~~n~~li~-~~~~iliD~G~~~~-----~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~ 105 (402)
T 1e5d_A 34 TYNAYLVE-DEKTTLFDTVKAEY-----KGELLCGIASV-IDPKKIDYLVIQHLELDHAGALPALIEACQ-PEKIFTSSL 105 (402)
T ss_dssp EEEEEEEC-SSSCEEECCCCGGG-----HHHHHHHHHTT-SCGGGCCEEEECCCSHHHHTTHHHHHHHHC-CSEEEEEHH
T ss_pred ceEEEEEE-CCCEEEEeCCCCcc-----HHHHHHHHHHh-CCcccCCEEEeCCCCccccccHHHHHHHCC-CCEEEEChH
Confidence 45899998 56799999996410 00123444444 445789999999999999999999998764 689999988
Q ss_pred cchhhHH
Q psy9964 96 TKAIAPI 102 (595)
Q Consensus 96 ~~~~~~~ 102 (595)
+...+..
T Consensus 106 ~~~~~~~ 112 (402)
T 1e5d_A 106 GQKAMES 112 (402)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7765544
No 86
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.75 E-value=1e-08 Score=109.33 Aligned_cols=71 Identities=28% Similarity=0.394 Sum_probs=60.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIESTR 587 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~~~ 587 (595)
+..+||+||||||+|+++|+.|++. |++|+|+|+.+... ..+|+..+++.++++|+++|+++.+.+ .
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~----G~~V~vlEr~~~~~--------~~~~~~~l~~~~~~~l~~lGl~~~~~~-~ 90 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHR----QVGHLVVEQTDGTI--------THPRVGTIGPRSMELFRRWGVAKQIRT-A 90 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCSCC--------SSCCCCEECHHHHHHHHHTTCHHHHHT-S
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCC--------CCCceeeeCHHHHHHHHHcCChHHHHh-h
Confidence 3568999999999999999999998 99999999987432 257889999999999999999998865 4
Q ss_pred cccc
Q psy9964 588 TCTV 591 (595)
Q Consensus 588 ~~~~ 591 (595)
..|.
T Consensus 91 ~~~~ 94 (549)
T 2r0c_A 91 GWPG 94 (549)
T ss_dssp SCCT
T ss_pred cCCc
Confidence 4443
No 87
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.74 E-value=2.5e-09 Score=99.98 Aligned_cols=75 Identities=21% Similarity=0.287 Sum_probs=56.1
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccC-CCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcC
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQ-GPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTH 94 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~-~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~ 94 (595)
+.|||+|..+++.+|||||.+.. ........+.+. + .+|++||+||.|.||++|+..+.+ . +++||+++
T Consensus 26 ~~n~~li~~~~~~iLiD~G~~~~----~~~~~~~~l~~~~g---~~i~~vi~TH~H~DH~gg~~~~~~-~--~~~v~~~~ 95 (223)
T 1m2x_A 26 AANAVYLVTDKGVVVIDCPWGED----KFKSFTDEIYKKHG---KKVIMNIATHSHDDRAGGLEYFGK-I--GAKTYSTK 95 (223)
T ss_dssp EEEEEEEEETTEEEEESCCSSGG----GHHHHHHHHHHHHC---CCEEEEECSSSSTTTTTTHHHHHH-T--TCEEEEEH
T ss_pred cccEEEEEeCCEEEEEeCCCChh----HHHHHHHHHHHHhC---CCeEEEEeccCCccccCchhhHhh-C--CCeEEEcH
Confidence 46999999889999999996411 000123445444 4 479999999999999999999987 2 68999998
Q ss_pred ccchhh
Q psy9964 95 PTKAIA 100 (595)
Q Consensus 95 ~~~~~~ 100 (595)
.+...+
T Consensus 96 ~~~~~~ 101 (223)
T 1m2x_A 96 MTDSIL 101 (223)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 88
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.74 E-value=7.1e-10 Score=106.41 Aligned_cols=77 Identities=10% Similarity=0.082 Sum_probs=56.5
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
.|||+|.. ++.+|||||.... .......+.+. +++.+|++||+||.|.||++|+..+.+.++ +++||+++.+
T Consensus 43 ~N~yli~~-~~~iLID~G~~~~-----~~~~~~~l~~~-~~~~~i~~IilTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~ 114 (262)
T 3hnn_A 43 SNSYVIEG-DKTAIIDPPVESF-----MKIYLEALQQT-VNLKKLDYVILGHFSPNRIPTFKALLELAP-QITFVCSLPA 114 (262)
T ss_dssp EEEEEEES-SSEEEECCCCHHH-----HHHHHHHHHHH-SCGGGEEEEECSSCCGGGHHHHHHHHHHCT-TCEEEECHHH
T ss_pred EEEEEEEC-CCEEEEECCCcch-----HHHHHHHHHHh-CChhhCCEEEECCCCcchhchHHHHHHHCC-CCEEEECHHH
Confidence 48999986 7899999995310 00112333333 334689999999999999999999998764 6999999877
Q ss_pred chhhH
Q psy9964 97 KAIAP 101 (595)
Q Consensus 97 ~~~~~ 101 (595)
...+.
T Consensus 115 ~~~l~ 119 (262)
T 3hnn_A 115 AGDLR 119 (262)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 89
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.74 E-value=4.4e-09 Score=98.63 Aligned_cols=75 Identities=19% Similarity=0.307 Sum_probs=56.7
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
+.|||+|..+++.+|||||.+.. ........+++.+ .+|++||+||.|.||++|+..+.+ . +++||+++.
T Consensus 32 ~~n~~li~~~~~~iliD~g~~~~----~~~~~~~~l~~~g---~~i~~ii~TH~H~DH~gg~~~l~~-~--~~~v~~~~~ 101 (228)
T 1jjt_A 32 PKHGLVVLVNAEAYLIDTPFTAK----DTEKLVTWFVERG---YKIKGSISSHFHSDSTGGIEWLNS-R--SIPTYASEL 101 (228)
T ss_dssp EEEEEEEEETTEEEEESCCSSHH----HHHHHHHHHHTTT---CEEEEEECSSSSHHHHTTHHHHHH-T--TCCEEEEHH
T ss_pred cceEEEEEECCcEEEEeCCCChh----hHHHHHHHHHHcC---CCeeEEEeCCCChhhhccHHHHHh-C--CCEEEEChH
Confidence 45999999888999999996410 0001234555555 379999999999999999999987 2 689999987
Q ss_pred cchhh
Q psy9964 96 TKAIA 100 (595)
Q Consensus 96 ~~~~~ 100 (595)
+...+
T Consensus 102 ~~~~~ 106 (228)
T 1jjt_A 102 TNELL 106 (228)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 90
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.72 E-value=9.8e-09 Score=111.41 Aligned_cols=65 Identities=28% Similarity=0.355 Sum_probs=57.7
Q ss_pred ceecEEEECCChHHHHHHHHHhc-CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ-NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~-~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
..+||+||||||+|+++|+.|++ . |++|+|+|+.+... ..+|+..++++++++|+++|+++.+.+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~----G~~V~viEr~~~~~--------~~g~a~~l~~~t~e~l~~lGl~~~~~~ 96 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP----DIRTCIVEQKEGPM--------ELGQADGIACRTMEMFEAFEFADSILK 96 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT----TSCEEEECSSSSCC--------SSCSCCEECHHHHHHHHHTTCHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC----CCCEEEEeCCCCCC--------CCCceeeeCHHHHHHHHHcCcHHHHHH
Confidence 46899999999999999999999 8 99999999987432 267899999999999999999988754
No 91
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.72 E-value=1.1e-08 Score=103.95 Aligned_cols=71 Identities=25% Similarity=0.318 Sum_probs=59.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIESTR 587 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~~~ 587 (595)
|..+||+|||||++|+++|+.|++. |++|+|+|+.+... ..+++..+++.++++|+++|+++.+.. .
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~----G~~v~viE~~~~~~--------~~~~~~~l~~~~~~~l~~~g~~~~~~~-~ 75 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQN----GWDVRLHEKSSELR--------AFGAGIYLWHNGLRVLEGLGALDDVLQ-G 75 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSCC--------CCSSEEEEEHHHHHHHHHTTCHHHHHT-T
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCCCC--------CCCceEEeCccHHHHHHHcCCHHHHHh-h
Confidence 4568999999999999999999998 99999999877432 156888999999999999999998865 3
Q ss_pred cccc
Q psy9964 588 TCTV 591 (595)
Q Consensus 588 ~~~~ 591 (595)
..+.
T Consensus 76 ~~~~ 79 (379)
T 3alj_A 76 SHTP 79 (379)
T ss_dssp CBCC
T ss_pred CCCc
Confidence 4443
No 92
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.70 E-value=1.1e-08 Score=104.77 Aligned_cols=65 Identities=18% Similarity=0.358 Sum_probs=56.1
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+.+... ..+++..+++.+.++|+++|+|+.+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~----G~~V~viE~~~~~~--------~~~~~~~l~~~~~~~l~~~g~~~~~~~ 69 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ----GHRVVVVEQARRER--------AINGADLLKPAGIRVVEAAGLLAEVTR 69 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCCC-----------CCCCEECHHHHHHHHHTTCHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCCCCC--------ccCceeeECchHHHHHHHcCcHHHHHH
Confidence 468999999999999999999998 99999999886432 256888999999999999999998754
No 93
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.70 E-value=5.1e-09 Score=98.48 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=55.6
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
.|||+|..+++.+|||||.+.. ........+.+.+ ..+|++||+||.|.||++|+..+.+ . +++||+++.+
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~----~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~~~~-~--~~~v~~~~~~ 107 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDA----QTEMLVNWVTDSL--HAKVTTFIPNHWHGDCIGGLGYLQR-K--GVQSYANQMT 107 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHH----HHHHHHHHHHHHH--CCEEEEEECSSSSHHHHTTHHHHHH-T--TCEEEEEHHH
T ss_pred ceEEEEEeCCEEEEEeCCCCHH----HHHHHHHHHHHhc--CCCeEEEEeCCCCccccCCHHHHHh-C--CCeEEEcHHH
Confidence 5999999989999999996410 0001234444442 2579999999999999999999987 2 6899999876
Q ss_pred chhh
Q psy9964 97 KAIA 100 (595)
Q Consensus 97 ~~~~ 100 (595)
...+
T Consensus 108 ~~~~ 111 (232)
T 1a7t_A 108 IDLA 111 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 94
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=98.69 E-value=2.8e-08 Score=93.24 Aligned_cols=75 Identities=13% Similarity=0.124 Sum_probs=56.3
Q ss_pred eEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHh
Q psy9964 4 IKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEM 83 (595)
Q Consensus 4 ~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~ 83 (595)
|+|+.+|. |||+|+.++.++|||+|.... .+. ...++++||+||.|.||+ ++..+...
T Consensus 30 ~~it~lg~------s~~li~~~~~~iliDpg~~~~-----------~~~----~~~~id~VliTH~H~DH~-~~~~l~~~ 87 (235)
T 3kl7_A 30 LTITFIKH------GSLMLTYDNHSIQVDPVSEYA-----------DYT----TFPKADIILITHEHGDHL-DPKAIQAV 87 (235)
T ss_dssp EEEEEEET------TEEEEEETTEEEEESCCTTTC-----------CTT----SSCCCSEEEECCSSTTTC-CHHHHHHH
T ss_pred eEEEEEcc------eEEEEEECCEEEEECCCCCcc-----------chh----hCCCCCEEEECCCccccC-CHHHHHHh
Confidence 77888864 899999999999999996521 011 125799999999999999 67777653
Q ss_pred cCCCccEEEcCccchhh
Q psy9964 84 FGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 84 ~~~~~~v~~~~~~~~~~ 100 (595)
...+++||++..+...+
T Consensus 88 ~~~~~~v~~~~~~~~~l 104 (235)
T 3kl7_A 88 EKSDTEIIANENSQKKL 104 (235)
T ss_dssp CCTTCEEEECHHHHHHH
T ss_pred hcCCCEEEEcHHHHHHh
Confidence 33468999987765443
No 95
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=98.69 E-value=1.1e-08 Score=99.66 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=53.2
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcC--CCccEEEc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFG--YAGPIYMT 93 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~--~~~~v~~~ 93 (595)
+.|||+|..+++.+|||||...... ........+.+.+ .+|++||+||.|.||++|++.|.+.++ ..+++|++
T Consensus 31 ~~n~~li~~~~~~ilID~G~~~~~~--~~~~l~~~l~~~~---~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~ 105 (289)
T 4ad9_A 31 GTNTYLVGTGPRRILIDTGEPAIPE--YISCLKQALTEFN---TAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKL 105 (289)
T ss_dssp CCEEEEECSSSSEEEECCCSTTCHH--HHHHHHHHHHHTT---CCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEEC
T ss_pred ceEEEEEecCCceEEEeCCCCCChH--HHHHHHHHHHHcC---CCceEEEEcCCCCcccccHHHHHHhhccCCCceEEec
Confidence 5799999988889999999542100 0001223444445 479999999999999999999999752 25677775
Q ss_pred Cc
Q psy9964 94 HP 95 (595)
Q Consensus 94 ~~ 95 (595)
..
T Consensus 106 ~~ 107 (289)
T 4ad9_A 106 PR 107 (289)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 96
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.69 E-value=5.9e-09 Score=97.70 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=55.0
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCc
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHP 95 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~ 95 (595)
..|||+|..+++.+|||||..... .....+.+.+.. ..+|++||+||.|.||++|+..+.+. +++||+++.
T Consensus 40 ~~n~~li~~~~~~iliD~G~~~~~----~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~ 110 (227)
T 1mqo_A 40 PSNGLVLNTSKGLVLVDSSWDDKL----TKELIEMVEKKF--QKRVTDVIITHAHADRIGGIKTLKER---GIKAHSTAL 110 (227)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHH----HHHHHHHHHHHH--TSCEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHH
T ss_pred cceEEEEEeCCeEEEEECCCChHH----HHHHHHHHHHhc--CCCceEEEeCCCCchhccchHHHhhC---CcEEEeccc
Confidence 359999998899999999964100 001223444432 26899999999999999999999885 488998876
Q ss_pred cchh
Q psy9964 96 TKAI 99 (595)
Q Consensus 96 ~~~~ 99 (595)
+...
T Consensus 111 ~~~~ 114 (227)
T 1mqo_A 111 TAEL 114 (227)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 6543
No 97
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.69 E-value=7.6e-09 Score=105.77 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=57.4
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccccccc
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIESTRTC 589 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~~~~~ 589 (595)
.+||+|||||++|+++|+.|++. |++|+|+|+.+.... ....|+..+++.++++|+++|+|+.+.+ ...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~------~~~~~~g~l~~~~~~~l~~lg~~~~~~~-~~~ 70 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA----GIDNVILERQTPDYV------LGRIRAGVLEQGMVDLLREAGVDRRMAR-DGL 70 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH----TCCEEEECSSCHHHH------HTCCCCCEECHHHHHHHHHTTCCHHHHH-HCE
T ss_pred CccEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCcc------cCCCceEeECHHHHHHHHHcCCcHHHHh-cCC
Confidence 47999999999999999999998 999999998774210 0134666799999999999999998865 344
Q ss_pred cc
Q psy9964 590 TV 591 (595)
Q Consensus 590 ~~ 591 (595)
|+
T Consensus 71 ~~ 72 (394)
T 1k0i_A 71 VH 72 (394)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 98
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.67 E-value=8e-09 Score=99.16 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccC-CCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcC
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQ-GPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTH 94 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~-~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~ 94 (595)
+.|||+|..+++.+|||||.+.. ........+.+. + .+|++||+||.|.||++|+..+.+. +++||+++
T Consensus 67 ~~n~~li~~~~~~iLID~G~~~~----~~~~l~~~l~~~~g---~~i~~VilTH~H~DH~gg~~~~~~~---~a~v~~~~ 136 (265)
T 2y8b_A 67 SSNGLIVRDADELLLIDTAWGAK----NTVALLAEIEKQIG---LPVTRSISTHFHDDRVGGVDVLRAA---GVATYTSP 136 (265)
T ss_dssp EEEEEEEEETTEEEEESCCSSHH----HHHHHHHHHHHHTC---SCEEEEECSSSSHHHHTTHHHHHHT---TCEEEECH
T ss_pred cceEEEEEECCeEEEEeCCCCHH----HHHHHHHHHHHhcC---CCeEEEEeCCCChhhcCCHHHHhhC---CCeEEECH
Confidence 45999999999999999996410 000123445554 4 3799999999999999999998872 68999998
Q ss_pred ccchhhH
Q psy9964 95 PTKAIAP 101 (595)
Q Consensus 95 ~~~~~~~ 101 (595)
.+...+.
T Consensus 137 ~~~~~~~ 143 (265)
T 2y8b_A 137 LTRQLAE 143 (265)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7765443
No 99
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.65 E-value=5.9e-09 Score=106.97 Aligned_cols=78 Identities=19% Similarity=0.150 Sum_probs=57.5
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCC---CCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGP---VTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMT 93 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~---~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~ 93 (595)
.|||+|..+++.+|||||.... .......+.+. + .+.+|++||+||.|.||++|++.+.+.++ +++||++
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~-----~~~~~~~l~~~-~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p-~~~v~~~ 107 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGT-----FDELMARVEDA-LQQVGMERVDYIIQNHVEKDHSGVLVELHRRFP-EAPIYCT 107 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTC-----HHHHHHHHHHH-HHHHTCCCCCEEECSCCSHHHHTTHHHHHHHST-TCCEEEC
T ss_pred EEEEEEEeCCcEEEEeCCCCcc-----HHHHHHHHHHH-hccCCccCCCEEEeCCCCCcccchHHHHHHHCC-CCEEEEC
Confidence 4899999887899999996411 00122344443 1 23789999999999999999999998764 6899999
Q ss_pred CccchhhH
Q psy9964 94 HPTKAIAP 101 (595)
Q Consensus 94 ~~~~~~~~ 101 (595)
+.+...+.
T Consensus 108 ~~~~~~~~ 115 (404)
T 2ohh_A 108 EVAVKGLL 115 (404)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87665443
No 100
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.64 E-value=3.9e-08 Score=100.57 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=54.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWD 581 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~ 581 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+... ...++++.+++.++++|+++|+++
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~-------~~~~~g~~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDA----GVDVDVYERSPQPL-------SGFGTGIVVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSC-------CCCSCEEECCHHHHHHHHHTTCCG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCCCC-------CccccccccChhHHHHHHHcCCcc
Confidence 4568999999999999999999998 99999999876421 114577789999999999999997
No 101
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=98.63 E-value=1.5e-08 Score=98.33 Aligned_cols=72 Identities=14% Similarity=0.194 Sum_probs=50.8
Q ss_pred cEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHH----hc---CCCccE
Q psy9964 18 SCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTE----MF---GYAGPI 90 (595)
Q Consensus 18 ~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~----~~---~~~~~v 90 (595)
+|++| ++..+|||||.+.. ..+.. ...++++||+||.|.||++|++.+.. .+ ...++|
T Consensus 13 ~~~~i--~~~~iLiD~G~~~~----------~~l~~---~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v 77 (280)
T 2e7y_A 13 TWIYY--SPERILFDAGEGVS----------TTLGS---KVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDV 77 (280)
T ss_dssp EEEEE--GGGTEEEEECTTHH----------HHHGG---GGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEE
T ss_pred EEEEE--CCcEEEEECCcchH----------HHhcc---CccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEE
Confidence 45555 46789999996521 12222 23689999999999999999999853 12 124899
Q ss_pred EEcCccchhhHHHHH
Q psy9964 91 YMTHPTKAIAPILLE 105 (595)
Q Consensus 91 ~~~~~~~~~~~~~l~ 105 (595)
|++..+. .+...+.
T Consensus 78 ~~~~~~~-~l~~~~~ 91 (280)
T 2e7y_A 78 FYPEGNR-AVEEYTE 91 (280)
T ss_dssp EEETTCH-HHHHHHH
T ss_pred EECccHH-HHHHHHH
Confidence 9999887 6665443
No 102
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=98.62 E-value=5.7e-08 Score=93.10 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=56.7
Q ss_pred eEEEEecCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCC------ccccccCCCCC----CCccEEEeCCCChhh
Q psy9964 4 IKVTPLGAGQDVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPD------FKFIAPQGPVT----DMIDCLIISHFHLDH 73 (595)
Q Consensus 4 ~~i~~lg~~~~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~------~~~l~~~~~~~----~~i~~i~lTH~H~DH 73 (595)
|+|+.+|. +||+|+.++..||||++........ .+.- .+.+.+..+.+ .++++|++||.|.||
T Consensus 5 m~it~lGh------a~~li~~~g~~iLiDp~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH 77 (264)
T 3rpc_A 5 TQYTHIRN------ATGKLTIKNTTFLIDPFLAPKDTYP-GFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDH 77 (264)
T ss_dssp CEEEEEET------TEEEEEETTEEEEESCCCCCTTCBC-CCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGG
T ss_pred EEEEEEeC------cEEEEEECCEEEEeCcccCCCcCcc-CCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhh
Confidence 78999975 7999999999999999754211000 0000 01111111222 279999999999999
Q ss_pred cCCcHHHHHhcCCCccEEEc-Cccc
Q psy9964 74 CGALPYFTEMFGYAGPIYMT-HPTK 97 (595)
Q Consensus 74 ~~g~~~l~~~~~~~~~v~~~-~~~~ 97 (595)
++++..+.. ..+++||++ ....
T Consensus 78 ~~~~~~~~~--~~~~~v~~~~~~~~ 100 (264)
T 3rpc_A 78 WDDTAINSI--PKSLPIFVQNTADK 100 (264)
T ss_dssp SCHHHHHHS--CTTSCEEESSHHHH
T ss_pred CCCHHHHhh--ccCCeEEEeCHHHH
Confidence 999988776 336899998 4443
No 103
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.62 E-value=6e-09 Score=106.69 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=57.1
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
.|||+|.. ++.+|||||.... .......+.+. +.+.+|++||+||.|.||++|++.+.+.++ +++||+++.+
T Consensus 36 ~n~~li~~-~~~iliD~g~~~~-----~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~ 107 (398)
T 1ycg_A 36 YNAYLIVD-DKTALVDTVYEPF-----KEELIAKLKQI-KDPVKLDYLVVNHTESDHAGAFPAIMELCP-DAHVLCTQRA 107 (398)
T ss_dssp ECCEEECS-SSCEEECCCCGGG-----HHHHHHHHHHH-CSSCCCSEEEESCCSHHHHTTHHHHHHHCT-TCEEEECHHH
T ss_pred EEEEEEEC-CCEEEEeCCCccc-----HHHHHHHHHHh-cCcccCCEEEeCCCCcchhhhHHHHHHHCC-CCEEEEcHHH
Confidence 58999984 5699999996410 00123445444 445789999999999999999999998764 6899999876
Q ss_pred chhhH
Q psy9964 97 KAIAP 101 (595)
Q Consensus 97 ~~~~~ 101 (595)
...+.
T Consensus 108 ~~~l~ 112 (398)
T 1ycg_A 108 FDSLK 112 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 104
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.62 E-value=1.5e-08 Score=96.29 Aligned_cols=80 Identities=15% Similarity=0.221 Sum_probs=55.1
Q ss_pred CCCcEEEEEEC-CeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEc
Q psy9964 15 VGRSCILVSMG-GKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMT 93 (595)
Q Consensus 15 ~~~~~~~i~~~-~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~ 93 (595)
.+.|||+|..+ ++.+|||||.... ........+++. +.+..+ +||+||.|.||++|+..+.+ + +++||++
T Consensus 28 ~~~n~~li~~~~~~~iLiD~G~~~~----~~~~l~~~l~~~-~~~~~~-~vi~TH~H~DH~gg~~~l~~-~--~~~v~~~ 98 (246)
T 2fhx_A 28 YSSNVLVAKMLDGTVVIVSSPFENL----GTQTLMDWVAKT-MKPKKV-VAINTHFHLDGTGGNEIYKK-M--GAETWSS 98 (246)
T ss_dssp TTEEEEEEECTTSEEEEESCCSSHH----HHHHHHHHHHHH-HCCSEE-EEECCSSSHHHHTTHHHHHH-T--TCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCHH----HHHHHHHHHHHh-cCCCcE-EEEeCCCCccccChHHHHhh-c--CCEEEEc
Confidence 35699999865 4689999996410 000112334442 222345 79999999999999999987 3 5899999
Q ss_pred CccchhhHHH
Q psy9964 94 HPTKAIAPIL 103 (595)
Q Consensus 94 ~~~~~~~~~~ 103 (595)
+.+...+...
T Consensus 99 ~~~~~~~~~~ 108 (246)
T 2fhx_A 99 DLTKQLRLEE 108 (246)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9887765543
No 105
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.62 E-value=2.3e-08 Score=102.10 Aligned_cols=62 Identities=29% Similarity=0.380 Sum_probs=47.0
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCccc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDH 582 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~ 582 (595)
+|.+|||+||||||+|+++|+.|+++ |++|+|+|+.+.... + ...+-+|++ +.|+.+|++..
T Consensus 1 ~Me~yDViIVGaGpaGl~~A~~La~~----G~~V~v~Er~~~~~~----~---~~~g~~l~~---~~l~~l~~~~~ 62 (397)
T 3oz2_A 1 GMETYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGS----P---VRCGEGLSK---GILNEADIKAD 62 (397)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTC----S---CCSCCEEET---HHHHHTTCCCC
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCCCCC----C---CceecccCH---HHHHHcCCCch
Confidence 47789999999999999999999999 999999998764321 0 112335665 46777887654
No 106
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.61 E-value=2.7e-08 Score=102.63 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=55.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+... ......+++.+.++|+++|+|+.+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~----G~~V~v~E~~~~~~---------~~~g~~~~~~~~~~l~~~g~~~~~~~ 67 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKS----GFKVKIVEKQKFPR---------FVIGESLLPRCMEHLDEAGFLDAVKA 67 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSC---------CCSCCBCCGGGHHHHHHTTCHHHHHH
T ss_pred CccCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCCCC---------CcccCcccHhHHHHHHHcCChHHHHH
Confidence 3468999999999999999999998 99999999986322 24556899999999999999988765
No 107
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.58 E-value=4.9e-08 Score=104.35 Aligned_cols=65 Identities=15% Similarity=0.239 Sum_probs=56.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~~~ 585 (595)
|+.+||+|||||++|+++|+.|++. |++|+|+|+.+... ...+.++++.+.++|+.+|+|+.+..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~----G~~V~LiEr~~~~~---------~~~G~~l~p~~~~~l~~lGl~~~l~~ 85 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL----GHDVTIYERSAFPR---------YRVGESLLPGTMSILNRLGLQEKIDA 85 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSC---------CCCCCBCCHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC----CCCEEEEcCCCCCC---------CceeeeECHHHHHHHHHcCCcHHHHh
Confidence 4578999999999999999999998 99999999886432 23456899999999999999987755
No 108
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.57 E-value=7.5e-09 Score=106.51 Aligned_cols=78 Identities=15% Similarity=0.054 Sum_probs=56.9
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
.|||+|.. ++.+|||||.... .......+.+. +.+.+|++||+||.|.||++|+..+.+.++ +++||+++.+
T Consensus 41 ~n~~li~~-~~~iLID~G~~~~-----~~~~~~~l~~~-~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~-~~~v~~~~~~ 112 (414)
T 2q9u_A 41 YNSYFIDD-ECPTVIDSVKYPF-----AEEWLSRIAAC-CPLDKIKYVVMNHAEGDHASSLKDHYHKFT-NATFVCTKKC 112 (414)
T ss_dssp ECCEEECS-SSCEEECCCCGGG-----HHHHHHHHHHH-SCGGGCCEEECSCCSGGGTTTHHHHGGGST-TCEEEECHHH
T ss_pred eeEEEEEC-CCEEEEeCCCccc-----HHHHHHHHHHh-cCcccCCEEEeCCCCcchhcCHHHHHHHCC-CCEEEECHHH
Confidence 58999984 6799999996310 00112334443 334789999999999999999999998654 6899999887
Q ss_pred chhhHH
Q psy9964 97 KAIAPI 102 (595)
Q Consensus 97 ~~~~~~ 102 (595)
...+..
T Consensus 113 ~~~~~~ 118 (414)
T 2q9u_A 113 QEHLKI 118 (414)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 109
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.50 E-value=9.6e-08 Score=98.04 Aligned_cols=63 Identities=24% Similarity=0.239 Sum_probs=52.2
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccc
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHI 583 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~ 583 (595)
.+|+||||||+|+++|+.|++. |++|+|+|+.+.... ...+.++.+++.++++|+++|+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~----G~~v~v~Er~~~~~~------~~~G~~i~l~~~~~~~L~~lg~~~~~ 64 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH----GIKVTIYERNSAASS------ILPGYGIHINSFGKQALQECLPAENW 64 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCSSCS------SCCCCEEEECHHHHHHHHHHSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCCEEEEecCCCCCc------CCCceEEeeCHHHHHHHHHcCChHHH
Confidence 3799999999999999999999 999999998774321 11244667899999999999998764
No 110
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.48 E-value=5.6e-08 Score=91.97 Aligned_cols=62 Identities=24% Similarity=0.329 Sum_probs=50.0
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCcc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPT 96 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~ 96 (595)
++||+|+. +|||||... .....+++.++++. ++|++||.|.||++|++.+ .+++||+++.+
T Consensus 32 G~s~lie~----iLiD~G~~~--------~l~~~l~~~gi~~~--~~IvlTH~H~DH~ggl~~l-----~~~~v~~~~~~ 92 (267)
T 3h3e_A 32 GFSVLVDS----VLFDTGKSD--------VFLKNARKLGIDLP--KDVLISHGHYDHAGGLLYL-----SGKRVWLRKEA 92 (267)
T ss_dssp SCEEEETT----EEECCCSSS--------HHHHHHHHTTCCCC--SEEECSCSCHHHHGGGGGC-----CSCEEEEEGGG
T ss_pred EeHHeeee----EEEECCCcH--------HHHHHHHHCCcCcC--CEEEECCCChhhhCCHHHh-----cCCEEEECHHH
Confidence 48999964 999999641 24567777787654 9999999999999999988 26899998875
Q ss_pred c
Q psy9964 97 K 97 (595)
Q Consensus 97 ~ 97 (595)
.
T Consensus 93 ~ 93 (267)
T 3h3e_A 93 L 93 (267)
T ss_dssp G
T ss_pred H
Confidence 4
No 111
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.47 E-value=5.8e-08 Score=88.94 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=55.4
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEc
Q psy9964 14 DVGRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMT 93 (595)
Q Consensus 14 ~~~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~ 93 (595)
..+.|||+|..+++.+|||||.... .....+++.+ +|++|++||. ||++|+..+.+.+ +++||++
T Consensus 21 ~~~~n~~li~~~~~~iliD~g~~~~-------~~~~~l~~~g----~i~~ii~TH~--DH~gg~~~~~~~~--~a~v~~~ 85 (201)
T 2p97_A 21 NIDFNGFAWIRPEGNILIDPVALSN-------HDWKHLESLG----GVVWIVLTNS--DHVRSAKEIADQT--YTKIAGP 85 (201)
T ss_dssp TEEEEEEEECCTTCCEEESCCCCCH-------HHHHHHHHTT----CCSEEECSSG--GGCTTHHHHHHHS--CCEEEEE
T ss_pred CcceeEEEEEeCCeeEEEECCCCcH-------HHHHHHHhcC----CCCEEEECCc--hhhhhHHHHHHhc--CCEEEEc
Confidence 3456999999888899999994211 2234555543 7999999999 9999999999865 4899999
Q ss_pred Cccchhh
Q psy9964 94 HPTKAIA 100 (595)
Q Consensus 94 ~~~~~~~ 100 (595)
+.+...+
T Consensus 86 ~~~~~~~ 92 (201)
T 2p97_A 86 VAEKENF 92 (201)
T ss_dssp GGGTTSC
T ss_pred HhHhhhh
Confidence 8776543
No 112
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.45 E-value=1.4e-07 Score=96.45 Aligned_cols=68 Identities=19% Similarity=0.299 Sum_probs=53.4
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccH-hHHHHHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINS-SSKQLFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~-~~~~~l~~lg~~~~~~~ 585 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+.... ...++...+.+ ...++|+++|+|+.+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~----G~~v~v~E~~~~~~~------~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN----GIDVSVYERDNDREA------RIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT----TCEEEEEECSSSTTC------CCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCccc------cccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 4568999999999999999999998 999999998764221 11334455554 46899999999998754
No 113
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=98.43 E-value=3.6e-07 Score=92.25 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=55.7
Q ss_pred eEEEEecCCCCCCCcEEEEEEC-CeEEEEe--CCCCCCCC----------------CCCCCCCcc----ccccCCCCCCC
Q psy9964 4 IKVTPLGAGQDVGRSCILVSMG-GKNIMLD--CGMHMGYH----------------DDRKFPDFK----FIAPQGPVTDM 60 (595)
Q Consensus 4 ~~i~~lg~~~~~~~~~~~i~~~-~~~~liD--~G~~~~~~----------------~~~~~~~~~----~l~~~~~~~~~ 60 (595)
|+++++|. +||+|+.+ +..|||| ||.+.... .....+.+. .+...+ ..+
T Consensus 62 ~~it~lG~------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~--~~~ 133 (379)
T 3bv6_A 62 FSMWWLGC------TGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFA--IKE 133 (379)
T ss_dssp EEEEEEET------TEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGG--CCC
T ss_pred eEEEEecc------cEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHH--CCC
Confidence 78888864 79999985 8899999 66532100 000000000 111111 257
Q ss_pred ccEEEeCCCChhhcC--CcHHHHHhcCCCccEEEcCccchhh
Q psy9964 61 IDCLIISHFHLDHCG--ALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 61 i~~i~lTH~H~DH~~--g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
+++||+||.|.||++ ++..+.+.++.+++||++......+
T Consensus 134 iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l 175 (379)
T 3bv6_A 134 IDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLW 175 (379)
T ss_dssp CSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHH
T ss_pred CCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHH
Confidence 999999999999996 4555665442258999987755444
No 114
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.42 E-value=3.9e-07 Score=91.50 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=56.3
Q ss_pred ceEEEEecCCCCCCCcEEEEEEC-CeEEEEe--CCCCCCCCCCCCC-------------CCccccc--cCCCC---CCCc
Q psy9964 3 EIKVTPLGAGQDVGRSCILVSMG-GKNIMLD--CGMHMGYHDDRKF-------------PDFKFIA--PQGPV---TDMI 61 (595)
Q Consensus 3 ~~~i~~lg~~~~~~~~~~~i~~~-~~~~liD--~G~~~~~~~~~~~-------------~~~~~l~--~~~~~---~~~i 61 (595)
.|+++++|. +||+|+.+ +..|||| ||.+........+ .....+. ...++ ..+|
T Consensus 37 ~~~it~lG~------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~i 110 (360)
T 2wyl_A 37 TFAMWWLGC------TGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQI 110 (360)
T ss_dssp CEEEEEEET------TEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCC
T ss_pred cEEEEEecc------cEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCC
Confidence 378999865 79999985 8899999 7754210000000 0000000 01122 2579
Q ss_pred cEEEeCCCChhhcC--CcHHHHHhcCCCccEEEcCccchhh
Q psy9964 62 DCLIISHFHLDHCG--ALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 62 ~~i~lTH~H~DH~~--g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
++||+||.|.||++ ++..+.+.++.+++||++......+
T Consensus 111 d~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l 151 (360)
T 2wyl_A 111 DAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLW 151 (360)
T ss_dssp SEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHH
T ss_pred CEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHH
Confidence 99999999999996 3555666442258999987755443
No 115
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.41 E-value=1.2e-07 Score=100.69 Aligned_cols=61 Identities=25% Similarity=0.282 Sum_probs=51.4
Q ss_pred ceecEEEECCChHHHHHHHHHhc------------CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHH
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ------------NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFET 576 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~------------~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~ 576 (595)
..+||+|||||++|+++|+.|++ . |++|+|||+.+... .+-+.++.+.++++|++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~----G~~V~liE~~~~~~---------~g~g~~~~p~~~~~l~~ 72 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSP----KLNITLIESPDVAT---------IGVGEGTWPSMRSTLSK 72 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSC----SCEEEEEECSSCCC---------CCSCEECCTHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCC----CCeEEEEeCCCCCC---------cceeeechHhHHHHHHH
Confidence 45799999999999999999999 7 99999999865221 12256788999999999
Q ss_pred cCCccc
Q psy9964 577 IGAWDH 582 (595)
Q Consensus 577 lg~~~~ 582 (595)
+|+++.
T Consensus 73 lGi~e~ 78 (526)
T 2pyx_A 73 IGIDEN 78 (526)
T ss_dssp HTCCHH
T ss_pred cCCCHH
Confidence 999986
No 116
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.41 E-value=5.4e-06 Score=84.02 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=59.8
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch-hhhhcCCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ-VRNAMNVQ 240 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~-vR~~l~~~ 240 (595)
..+....+.+.|.+.+.+.|++++++++|++++. +++.+.|++.+| ++++|.||.|+|.+|. +.+.++..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~---~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVER---DGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLN 229 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEEC---SSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCC
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEE---ECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCC
Confidence 4567788999999999889999999999999986 455678888877 7999999999999987 77777643
No 117
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.40 E-value=2.4e-07 Score=97.91 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=52.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHH-HHHHcCCcccccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQ-LFETIGAWDHIES 585 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~-~l~~lg~~~~~~~ 585 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+... ......+.+.+.+ +|+.+|+|+.+..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liE~~~~~~---------~~~g~~~~~~~~~~~l~~lgl~~~~~~ 70 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMR----GHRVLLLEREAFPR---------HQIGESLLPATVHGICAMLGLTDEMKR 70 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCSSC---------CCSCCBCCHHHHTTHHHHTTCHHHHHT
T ss_pred CccCCEEEECcCHHHHHHHHHHHhC----CCCEEEEccCCCCC---------CCCCcccCcchHHHHHHHhCcHHHHHH
Confidence 4568999999999999999999998 99999999987322 1223456676554 9999999988755
No 118
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.33 E-value=3e-07 Score=88.93 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=32.9
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+++||+||||||+|+++|+.|+++ |++|+|+|+.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~----G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRG 36 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCC
Confidence 358999999999999999999999 999999998764
No 119
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.33 E-value=4e-07 Score=97.06 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=51.7
Q ss_pred CceecEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHH-HHHHcCCccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQ-LFETIGAWDH 582 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~-~l~~lg~~~~ 582 (595)
+..+||+|||||++|+++|+.|++ . |++|+|||+.+... .+...++.+.+.+ +|+.+|+++.
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~~---------~~~g~~~~p~~~~~~l~~lGi~~~ 88 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQG----TADITLLQAPDIPT---------LGVGEATIPNLQTAFFDFLGIPED 88 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTT----SSEEEEEECCCCCC---------CCCCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCC----CCcEEEEeCCCCCc---------cceeeeechhHHHHHHHHhCCChH
Confidence 356899999999999999999999 7 99999999865321 2234678899999 9999999976
No 120
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.31 E-value=8.1e-08 Score=103.69 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=54.5
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhc---CCCccEEEc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMF---GYAGPIYMT 93 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~---~~~~~v~~~ 93 (595)
.|||+|..+++.+|||||.... .....+..+.+ ++...+|++||+||.|.||+||+..|.+.. ..+++||++
T Consensus 123 ~N~ylI~~~~g~iLIDtG~~~~----~a~~~l~~i~~-~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~ 197 (658)
T 2cfu_A 123 ANITFIRGDSGWIVVDTLTTPA----TARAAYELVSR-ELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAP 197 (658)
T ss_dssp SCEEEEECSSSEEEECCCSSHH----HHHHHHHHHHH-HHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEE
T ss_pred eEEEEEEECCEEEEEECCCCHH----HHHHHHHHHHh-hCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEc
Confidence 5999999888899999996421 00011122222 122368999999999999999999987521 126899999
Q ss_pred Cccchh
Q psy9964 94 HPTKAI 99 (595)
Q Consensus 94 ~~~~~~ 99 (595)
+.+...
T Consensus 198 ~~~~~~ 203 (658)
T 2cfu_A 198 AGFMEA 203 (658)
T ss_dssp TTHHHH
T ss_pred hhHHHH
Confidence 986553
No 121
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.30 E-value=4.5e-07 Score=92.55 Aligned_cols=62 Identities=31% Similarity=0.355 Sum_probs=47.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHI 583 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~ 583 (595)
|..+||+|||||++|+++|+.|++. |++|+|+|+.+.... + ...+..+ +.++|+++|+|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~----G~~V~l~E~~~~~g~----~---~~~~~~~---~~~~~~~lg~~~~~ 63 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKY----GLKTLMIEKRPEIGS----P---VRCGEGL---SKGILNEADIKADR 63 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSTTC----S---CCSCCEE---ETHHHHHTTCCCCT
T ss_pred CccCCEEEECcCHHHHHHHHHHHHC----CCCEEEEeCCCCCCC----C---ccccccc---CHHHHHHcCCCCCh
Confidence 5679999999999999999999998 999999999874221 0 1122223 34788999998763
No 122
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.63 E-value=8.6e-08 Score=102.84 Aligned_cols=76 Identities=11% Similarity=0.079 Sum_probs=54.1
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhc---CCCccEEEc
Q psy9964 17 RSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMF---GYAGPIYMT 93 (595)
Q Consensus 17 ~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~---~~~~~v~~~ 93 (595)
.|||+|..+++.+|||||...... ...+..+.+ .+...+|++||+||.|.||+||+..|.+.. ..+++||++
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a----~~~l~~i~~-~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~ 207 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA----RAALDLYFQ-HRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAP 207 (668)
Confidence 499999888889999999652211 112233333 122368999999999999999999998630 135899999
Q ss_pred Cccc
Q psy9964 94 HPTK 97 (595)
Q Consensus 94 ~~~~ 97 (595)
+...
T Consensus 208 ~~~~ 211 (668)
T 2yhe_A 208 SGFM 211 (668)
Confidence 8863
No 123
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.27 E-value=6.7e-07 Score=95.14 Aligned_cols=62 Identities=23% Similarity=0.299 Sum_probs=51.1
Q ss_pred CceecEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHH-HHHHcCCccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQ-LFETIGAWDH 582 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~-~l~~lg~~~~ 582 (595)
+..+||+|||||++|+++|+.|++ . |++|+|||+.+... .+.+.++.+.+.+ +|+.+|+++.
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~----G~~V~liE~~~~~~---------~~~g~~~~~~~~~~~l~~lG~~~~ 68 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQ----QANITLIESAAIPR---------IGVGEATIPSLQKVFFDFLGIPER 68 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCS----SCEEEEEECSSSCC---------CCSCEECCTHHHHHTHHHHTCCHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCC----CCEEEEECCCCCCC---------cCCCcccchhHHHHHHHHhCCCHH
Confidence 346799999999999999999999 7 99999999865321 2224577888999 9999999875
No 124
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.24 E-value=1.1e-05 Score=82.31 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=59.2
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc-hhhhhcCCCCc
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARS-QVRNAMNVQYS 242 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S-~vR~~l~~~~~ 242 (595)
..++-..+.+.|.+.+++.|++++++++|++++.+ ++..+.|++.+| ++++|.||.|+|.+| .+++.++...+
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~ 242 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELP 242 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCC
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCC
Confidence 34566788899999998899999999999999862 233356888888 699999999999998 78888876543
No 125
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.21 E-value=5.6e-07 Score=95.18 Aligned_cols=60 Identities=23% Similarity=0.375 Sum_probs=47.4
Q ss_pred eecEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCccc
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDH 582 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~ 582 (595)
.+||+|||||++|+++|+.|++ . |++|+|||+.+... .+.+.++.+...++|+.+|+++.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~----G~~V~lvE~~~~~~---------~~~g~~~~~~~~~~l~~lgi~~~ 64 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD----RIDVTLVESGNVRR---------IGVGEATFSTVRHFFDYLGLDER 64 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG----GSEEEEEEC----------------CCEECCTTHHHHHHHHTCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC----CCEEEEEecCCCCc---------eeeccccCcchHHHHHHcCCCHH
Confidence 4699999999999999999999 8 99999999875321 23345677888899999999875
No 126
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.17 E-value=1.4e-06 Score=91.37 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=52.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCccc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDH 582 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~ 582 (595)
...+||+|||||++|+++|+.|++. |++|+|+|+.+... ..++..+.+.+++.|+.+|+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~----G~~V~liEk~~~~g---------~~~~~~~~~~~~~~l~~~g~~~~ 151 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL----GARVVLVEKRIKFS---------RHNVLHLWPFTIHDLRALGAKKF 151 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCSSCC---------CCCEEECCHHHHHHHHTTTHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC----CCeEEEEEeccccC---------CCCcccCChhHHHHHHHcCCccc
Confidence 3467999999999999999999998 99999999887422 23667788999999999998654
No 127
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.12 E-value=1.6e-06 Score=90.06 Aligned_cols=62 Identities=29% Similarity=0.491 Sum_probs=47.3
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcccc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWDHI 583 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~~~ 583 (595)
..+||+||||||+|+++|+.|++. |++|+|+|+.+.... ....+..++ +.+.|+++|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~----G~~V~vlE~~~~~~~------g~~~~g~~l---~~~~l~~lg~~~~~ 66 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR----GLKILLVDSKPWNRI------GDKPCGDAV---SKAHFDKLGMPYPK 66 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS----SCCEEEECSSCGGGT------TCSCCCCEE---EHHHHHHTTCCCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCCCCC------Ccccccccc---cHHHHHHhcCCCCc
Confidence 368999999999999999999998 999999999874221 001222234 56889999988754
No 128
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=98.03 E-value=5.1e-06 Score=76.80 Aligned_cols=51 Identities=25% Similarity=0.253 Sum_probs=34.6
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHH
Q psy9964 16 GRSCILVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFT 81 (595)
Q Consensus 16 ~~~~~~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~ 81 (595)
+.+|++|+.++..+|||||.+.. .+.. ...++++||+||.|.||++ ++.+.
T Consensus 19 ~~~~~li~~~~~~iLiD~g~~~~-----------~~~~---~~~~id~VliTH~H~DH~~-~~~l~ 69 (220)
T 1vjn_A 19 GHACFALEMEGKTIVTDPFDESV-----------GYPI---PNVTADVVTESHQHFDHNA-HHLVK 69 (220)
T ss_dssp ETTEEEEEETTEEEEESCCC----------------CC---CCCBCSEEECSSCC---CG-GGGCB
T ss_pred cCCEEEEEECCEEEEEcCCCCcC-----------CCCc---CCCCcCEEEECCCCCCCCC-chHhc
Confidence 34899999999999999996410 0111 1368999999999999998 66544
No 129
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.03 E-value=2.9e-06 Score=83.13 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=33.0
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+.|||+||||||+|+++|+.|++. |++|+|+|+...
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~----g~~v~lie~~~~ 40 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRA----RKQIALFDNNTN 40 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSCC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCC
Confidence 47789999999999999999999998 999999998754
No 130
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.96 E-value=0.00011 Score=74.26 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=58.8
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEcCCcEEEecEEEEecCCCc-hhhhhcCCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFESGESIECKLLLGTDGARS-QVRNAMNVQ 240 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S-~vR~~l~~~ 240 (595)
..++...+.+.|.+.+++.|++|+++++|++++. +++.+. |++.+| +++||.||.|+|.+| .+.+.++..
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~---~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLI---ENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEE---ECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 3567888999999999889999999999999986 345666 888888 799999999999998 567776654
No 131
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.96 E-value=8.7e-06 Score=83.83 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=44.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCch---hhccHhHHHHHHHcCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRV---SSINSSSKQLFETIGA 579 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~---~~l~~~~~~~l~~lg~ 579 (595)
+.+||+||||||+|+++|+.|++. |++|+|+|+.+..... .+|+ ..+...++..++.+|+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~----G~~V~viE~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~lg~ 83 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH----DVDVTVYTDRKPDEYS-------GLRLLNTVAHNAVTVQREVALDV 83 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT----TCEEEEEESCCGGGST-------TSCCCCCCCBCHHHHHHHHHTTC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC----CCeEEEEcCCChHhhc-------ccccccchhccchhhhhhhhcCh
Confidence 347999999999999999999999 9999999998732210 2232 2345678888888864
No 132
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.92 E-value=1.4e-05 Score=79.01 Aligned_cols=69 Identities=22% Similarity=0.207 Sum_probs=45.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAW 580 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~ 580 (595)
..+||+||||||+|+++|+.|+++. .|++|+|+|+.+...-... ...+..--..+.....++++++|+-
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r--~G~~V~viEk~~~~GG~~~-~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSW-LGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTT-CCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhC--CCCeEEEEECCCCCCceEE-eCCccCCHHHHHHHHHHHHHHcCCE
Confidence 4689999999999999999997421 2999999998763221110 1111111123556677888888873
No 133
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.90 E-value=7e-06 Score=80.64 Aligned_cols=38 Identities=32% Similarity=0.477 Sum_probs=33.8
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+|||+||||||+|+++|+.|++. |++|+|+|+...
T Consensus 3 te~~yDvvIIG~GpAGl~aA~~l~~~----g~~V~liE~~~~ 40 (312)
T 4gcm_A 3 TEIDFDIAIIGAGPAGMTAAVYASRA----NLKTVMIERGIP 40 (312)
T ss_dssp -CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCC
Confidence 34579999999999999999999998 999999998653
No 134
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.90 E-value=1.3e-05 Score=78.43 Aligned_cols=70 Identities=19% Similarity=0.223 Sum_probs=49.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWD 581 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~ 581 (595)
..+||+|||||++|+++|+.|++. ..|++|+|+|+.+....... ......+...+.+...++|+++|+.-
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~--~~G~~V~LiEk~~~~GGg~~-~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTL--RPDLRITIVEAGVAPGGGAW-LGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHH--CTTSCEEEEESSSSCCTTTT-CCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhc--CCCCEEEEEeCCCccCCccc-cCCccchhhhcchHHHHHHHHcCCcc
Confidence 368999999999999999999984 12899999998864321000 11122333445677899999999853
No 135
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.88 E-value=1.6e-05 Score=79.95 Aligned_cols=65 Identities=18% Similarity=0.274 Sum_probs=46.1
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCC-----C-CCCC--------CCCchhhccHhHHHHH
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHF-----S-KSSS--------YSNRVSSINSSSKQLF 574 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~-----~-~~~~--------~~~r~~~l~~~~~~~l 574 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+........ . .... .+.+...+...+.+.+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~----G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK----GYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKW 80 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHH
Confidence 468999999999999999999998 99999999875332100 0 0000 1334455667777888
Q ss_pred HHc
Q psy9964 575 ETI 577 (595)
Q Consensus 575 ~~l 577 (595)
+++
T Consensus 81 ~~~ 83 (363)
T 1c0p_A 81 VEL 83 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 776
No 136
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.88 E-value=7.5e-06 Score=83.59 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=32.5
Q ss_pred cCCCCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 504 SSLGGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 504 ~~~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..|.+..+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 21 ~~M~~~~~dViIIGgG~AGl~aA~~La~~----G~~V~llEk~~~ 61 (417)
T 3v76_A 21 QSMVAEKQDVVIIGAGAAGMMCAIEAGKR----GRRVLVIDHARA 61 (417)
T ss_dssp -------CCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred ccccCCCCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCC
Confidence 34555678999999999999999999998 999999999874
No 137
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.88 E-value=2.8e-06 Score=86.18 Aligned_cols=61 Identities=16% Similarity=0.177 Sum_probs=45.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCc-cc
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAW-DH 582 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~-~~ 582 (595)
||+||||||+|+++|+.|++.. +|++|+|+|+.+... ..++.+.+++.+++.+...+++ +.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~--~G~~V~v~E~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~ 63 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR--PLWAIDIVEKNDEQE--------VLGWGVVLPGRPGQHPANPLSYLDA 63 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSCTTC--------CCCSEEEEESCTTTCTTCGGGGSSC
T ss_pred eEEEECCCHHHHHHHHHHHhcC--CCCCEEEEECCCCCC--------cceeEEEeCcHHHHhhcCcchhhhh
Confidence 8999999999999999999741 289999999987432 1466677777766644444555 44
No 138
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.84 E-value=9.9e-06 Score=80.40 Aligned_cols=35 Identities=17% Similarity=0.318 Sum_probs=32.5
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~----G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA----GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC----CCcEEEEECCCC
Confidence 46999999999999999999998 999999999864
No 139
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.82 E-value=2.2e-05 Score=82.20 Aligned_cols=74 Identities=14% Similarity=0.201 Sum_probs=48.2
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC----CCCCCC--Cc-hhhccHhHHHHHHHcCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS----KSSSYS--NR-VSSINSSSKQLFETIGA 579 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~----~~~~~~--~r-~~~l~~~~~~~l~~lg~ 579 (595)
....+||+|||||++|+++|+.|++. |++|+|+|+.+...-... ....++ +. ...-.+...++++++|+
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~----g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSR----GTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTT----TCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 34568999999999999999999998 999999999864221000 000000 00 01115678899999998
Q ss_pred ccccc
Q psy9964 580 WDHIE 584 (595)
Q Consensus 580 ~~~~~ 584 (595)
.+.+.
T Consensus 89 ~~~~~ 93 (478)
T 2ivd_A 89 EGRIR 93 (478)
T ss_dssp GGGEE
T ss_pred cceee
Confidence 65543
No 140
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.81 E-value=3.2e-05 Score=78.48 Aligned_cols=68 Identities=18% Similarity=0.275 Sum_probs=55.8
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch-hhhhcC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ-VRNAMN 238 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~-vR~~l~ 238 (595)
..++...+.+.|.+.+++.|++++++++|++++. .++++.|++.+| +++||.||.|+|.+|. +.+.++
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~---~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDI---SPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEe---cCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 3456778999999999889999999999999986 345688888776 6999999999999875 444444
No 141
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.78 E-value=1.6e-05 Score=82.84 Aligned_cols=71 Identities=23% Similarity=0.329 Sum_probs=49.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCC------ceEEEecCCCCcccCCC--CCCC----CCC-chhhccHhHHHHHH
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKD------LSILMIESGPEKSLHFS--KSSS----YSN-RVSSINSSSKQLFE 575 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~------~~v~~~e~~~~~~~~~~--~~~~----~~~-r~~~l~~~~~~~l~ 575 (595)
+.+||+|||||++|+++|+.|+++ | .+|+|+|+.+...-... .... ..+ ......+...++++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~----G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~ 79 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKE----IKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVK 79 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHH----HTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHh----ccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHH
Confidence 357999999999999999999998 8 99999999753211000 0000 011 11233677889999
Q ss_pred HcCCcccc
Q psy9964 576 TIGAWDHI 583 (595)
Q Consensus 576 ~lg~~~~~ 583 (595)
++|+.+.+
T Consensus 80 ~lgl~~~~ 87 (470)
T 3i6d_A 80 DLGLEHLL 87 (470)
T ss_dssp HTTCCTTE
T ss_pred HcCCccee
Confidence 99997655
No 142
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.78 E-value=1.6e-05 Score=74.39 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=32.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
|+.+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~----g~~v~lie~~~ 36 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQK----GVRVGLLTQSL 36 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCC
Confidence 3468999999999999999999998 99999999873
No 143
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.77 E-value=3e-05 Score=74.88 Aligned_cols=68 Identities=19% Similarity=0.255 Sum_probs=44.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAW 580 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~ 580 (595)
..+||+|||||++|+++|+.|++. +|++|+|+|+.+.......... ...+...+.....++|+++|+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~---~G~~V~viEk~~~~gg~~~~~~-~~~~~~~~~~~~~~~l~~~G~~ 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN---PNVQVAIIEQSVSPGGGAWLGG-QLFSAMIVRKPAHLFLDEIGVA 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS---TTSCEEEEESSSSCCTTTTCCS-TTCCCEEEETTTHHHHHHHTCC
T ss_pred cccCEEEECccHHHHHHHHHHHHc---CCCeEEEEECCCCCCCceecCC-cchHHHHcCcHHHHHHHHcCCC
Confidence 468999999999999999999983 2899999998764321000000 0011122334456677777754
No 144
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.73 E-value=1.9e-05 Score=79.38 Aligned_cols=35 Identities=26% Similarity=0.529 Sum_probs=32.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|+++ |++|+|+|+.+
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~----G~~V~vlE~~~ 37 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG----GHEVLVAEAAE 37 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC
Confidence 458999999999999999999998 99999999985
No 145
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.73 E-value=0.00015 Score=73.22 Aligned_cols=71 Identities=10% Similarity=0.182 Sum_probs=60.0
Q ss_pred ceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc-hhhhhcCCC
Q psy9964 166 SYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARS-QVRNAMNVQ 240 (595)
Q Consensus 166 ~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S-~vR~~l~~~ 240 (595)
+..++...+.+.|.+.+++.|++|+++++|++++. +++++.|++.+| +++||.||.|+|.+| .+.+.++..
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~---~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRR---VDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEE---ETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE---eCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 34567788999999999989999999999999986 345688888888 799999999999998 566766653
No 146
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.73 E-value=2.2e-05 Score=79.47 Aligned_cols=39 Identities=31% Similarity=0.616 Sum_probs=34.4
Q ss_pred CCCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 506 LGGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 506 ~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.....+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~----G~~V~llE~~~~ 51 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKE----NKNTALFESGTM 51 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSST
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCCC
Confidence 344578999999999999999999998 999999998764
No 147
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.72 E-value=2e-05 Score=80.31 Aligned_cols=35 Identities=34% Similarity=0.601 Sum_probs=32.9
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+||+|||||++|+++|+.|+++ |.+|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~----G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER----GHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCC
Confidence 58999999999999999999998 999999999864
No 148
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.71 E-value=2e-05 Score=77.39 Aligned_cols=35 Identities=31% Similarity=0.288 Sum_probs=32.5
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|||+||||||+|+++|+.|++. |++|+|+|+.+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~----g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS----SLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHC----CCCEEEEecCCC
Confidence 48999999999999999999998 999999998753
No 149
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.70 E-value=1.9e-05 Score=83.99 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=34.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+++.
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~----G~~V~LlEk~d~ 52 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVR----GIQTGLVEMNDF 52 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESSST
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCcEEEEECCCC
Confidence 4579999999999999999999998 999999999853
No 150
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.69 E-value=0.00094 Score=70.03 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=56.0
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc---CCc--EEEecEEEEecCCCch-hhhh-cC
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE---SGE--SIECKLLLGTDGARSQ-VRNA-MN 238 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~---dG~--~~~adlvVgADG~~S~-vR~~-l~ 238 (595)
.++...|...|.+.+.+.|++|+++++|++++. +++.+.|++. +|+ +++||.||.|+|.+|. +++. ++
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~---~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~ 219 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARR---ENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMH 219 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEE---eCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhcc
Confidence 378899999999999989999999999999986 2355667773 576 7999999999999986 5554 54
No 151
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.65 E-value=2.8e-05 Score=78.99 Aligned_cols=37 Identities=22% Similarity=0.359 Sum_probs=33.9
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
|..+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~----G~~V~vlEk~~~ 38 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKL----GKSVTVFDNGKK 38 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhC----CCCEEEEeCCCC
Confidence 3568999999999999999999998 999999999864
No 152
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.65 E-value=5e-05 Score=79.35 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=50.9
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCC--ceEEEecCCCCcccCC--CCCCCC----CC-chhhccHhHHHHHHHcC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKD--LSILMIESGPEKSLHF--SKSSSY----SN-RVSSINSSSKQLFETIG 578 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~--~~v~~~e~~~~~~~~~--~~~~~~----~~-r~~~l~~~~~~~l~~lg 578 (595)
|..+||+|||||++|+++|+.|++. | .+|+|+|+.+...... .....+ .+ ......+...++++++|
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~----g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg 77 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERA----FPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIG 77 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHH----CTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTT
T ss_pred CCcccEEEECCCHHHHHHHHHHHHh----CCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcC
Confidence 4467999999999999999999998 8 9999999866421100 000010 11 12234678899999999
Q ss_pred Cccccc
Q psy9964 579 AWDHIE 584 (595)
Q Consensus 579 ~~~~~~ 584 (595)
+-+.+.
T Consensus 78 ~~~~~~ 83 (475)
T 3lov_A 78 LGEKLV 83 (475)
T ss_dssp CGGGEE
T ss_pred CcceEe
Confidence 876553
No 153
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.65 E-value=3e-05 Score=80.28 Aligned_cols=37 Identities=30% Similarity=0.612 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+.+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~----G~~V~llEk~~~ 60 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE----GANVLLLDKGNK 60 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC----CCCEEEEECCCC
Confidence 3468999999999999999999998 999999998763
No 154
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.64 E-value=3.2e-05 Score=81.66 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=46.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCC---CCCCC--CC--C-chhhccHhHHHHHHHcCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHF---SKSSS--YS--N-RVSSINSSSKQLFETIGAW 580 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~---~~~~~--~~--~-r~~~l~~~~~~~l~~lg~~ 580 (595)
+++||||||||++||++|+.|++. .|.+|+|+|+++...-.. ..... +| + +...-.+...+++++++.-
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~---~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~ 85 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI---DGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPK 85 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH---CCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh---CCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCc
Confidence 468999999999999999999873 289999999887422110 00011 11 1 1123457788888887653
No 155
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.64 E-value=3.3e-05 Score=78.86 Aligned_cols=41 Identities=29% Similarity=0.429 Sum_probs=36.2
Q ss_pred cCCCCceecEEEECCChHHHHHHHHHhc-CCCCCC-ceEEEecCCCC
Q psy9964 504 SSLGGKQYDVVISGGGMIGTTLACAIAQ-NPTLKD-LSILMIESGPE 548 (595)
Q Consensus 504 ~~~~~~~~dv~ivG~G~~G~~~a~~l~~-~~~~~~-~~v~~~e~~~~ 548 (595)
.++.+..+||+|||||++|+++|+.|++ . | .+|+|+|+.+.
T Consensus 15 ~~~~~~~~dVvIIG~G~~Gl~~A~~La~~~----G~~~V~vlE~~~~ 57 (405)
T 2gag_B 15 NPEPKKSYDAIIVGGGGHGLATAYFLAKNH----GITNVAVLEKGWL 57 (405)
T ss_dssp CCCCCSEEEEEEECCSHHHHHHHHHHHHHH----CCCCEEEECSSST
T ss_pred CCCCCCcCCEEEECcCHHHHHHHHHHHHhc----CCCcEEEEeCCCC
Confidence 3455668999999999999999999999 8 9 99999999864
No 156
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=97.64 E-value=8.2e-06 Score=81.38 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=43.7
Q ss_pred EEEECCeEEEEeCCCCCCCCCCCCCCCccccccCCCCCCCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhh
Q psy9964 21 LVSMGGKNIMLDCGMHMGYHDDRKFPDFKFIAPQGPVTDMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIA 100 (595)
Q Consensus 21 ~i~~~~~~~liD~G~~~~~~~~~~~~~~~~l~~~~~~~~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~ 100 (595)
++..++..++||+... .+ ..+|++|||||.|.||++|++. .++++||++..+...+
T Consensus 31 ~~~~pG~~ilVD~f~~-----------------~~--~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll 86 (367)
T 4b87_A 31 YKKIPGTGFTVDAFQY-----------------GV--VEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLL 86 (367)
T ss_dssp GGBCTTSSEEESCCSS-----------------SS--CTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHH
T ss_pred EEEECCCeEEEeCCCc-----------------CC--ccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHH
Confidence 3335667799997521 11 2689999999999999999983 3468999999887766
Q ss_pred HHH
Q psy9964 101 PIL 103 (595)
Q Consensus 101 ~~~ 103 (595)
...
T Consensus 87 ~~~ 89 (367)
T 4b87_A 87 KNK 89 (367)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 157
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.64 E-value=3.6e-05 Score=77.89 Aligned_cols=36 Identities=28% Similarity=0.536 Sum_probs=33.1
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|+++ |.+|+|+|+...
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~----G~~V~lle~~~~ 39 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR----GEEVTVIEKRFI 39 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSST
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCC
Confidence 468999999999999999999998 999999998753
No 158
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.64 E-value=8.1e-05 Score=74.30 Aligned_cols=73 Identities=14% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC-CCcccCCC--C------------CCCCC---CchhhccH
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG-PEKSLHFS--K------------SSSYS---NRVSSINS 568 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~-~~~~~~~~--~------------~~~~~---~r~~~l~~ 568 (595)
....+||+|||||++|+++|+.|++. |++|+|+|+. +...-... . ...++ .+.....+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~----G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~ 116 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRA----GHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHP 116 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHT----SCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHC----CCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHH
Confidence 34567999999999999999999998 9999999998 42111000 0 00011 12234567
Q ss_pred hHHHHHHHcCCcccc
Q psy9964 569 SSKQLFETIGAWDHI 583 (595)
Q Consensus 569 ~~~~~l~~lg~~~~~ 583 (595)
...++++++|+-..+
T Consensus 117 ~~~~~~~~lGl~~~~ 131 (376)
T 2e1m_A 117 LTLALIDKLGLKRRL 131 (376)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCcce
Confidence 888999999987654
No 159
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.63 E-value=8e-05 Score=76.61 Aligned_cols=39 Identities=28% Similarity=0.562 Sum_probs=34.7
Q ss_pred CCCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 506 LGGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 506 ~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+..+||+|||+|++|+++|+.|++. |.+|+|+|+++.
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~----g~~v~~~e~~~~ 54 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHY----GKKILVLDRNPY 54 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeccCC
Confidence 334679999999999999999999999 999999999863
No 160
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.62 E-value=2.6e-05 Score=78.56 Aligned_cols=36 Identities=25% Similarity=0.524 Sum_probs=33.1
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
.+||+|||||++|+++|+.|++. |++|+|+|+.+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~----G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA----GLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT----TCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCCCC
Confidence 57999999999999999999998 9999999997643
No 161
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.62 E-value=3.5e-05 Score=79.59 Aligned_cols=37 Identities=24% Similarity=0.431 Sum_probs=33.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGPEK 549 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~~~ 549 (595)
..+||||||||++|+++|+.|++. |. +|+|||+.+..
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~----G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR----GYTNVTVLDPYPVP 42 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT----TCCCEEEEESSCSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc----CCCcEEEEeCCCCC
Confidence 468999999999999999999998 99 99999998753
No 162
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.62 E-value=7.4e-05 Score=78.67 Aligned_cols=71 Identities=13% Similarity=0.247 Sum_probs=49.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC----CCCCCCCchhh---ccHhHHHHHHHcCCcc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS----KSSSYSNRVSS---INSSSKQLFETIGAWD 581 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~----~~~~~~~r~~~---l~~~~~~~l~~lg~~~ 581 (595)
+.+||+|||||++|+++|+.|++. |++|+|+|+.+...-... ....++.-... ..+...++++++|+.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~ 87 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH----GLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLRE 87 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT----SCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCcc
Confidence 357999999999999999999998 999999999874321000 00001111112 2477899999999976
Q ss_pred cc
Q psy9964 582 HI 583 (595)
Q Consensus 582 ~~ 583 (595)
.+
T Consensus 88 ~~ 89 (504)
T 1sez_A 88 KQ 89 (504)
T ss_dssp GE
T ss_pred cc
Confidence 54
No 163
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.61 E-value=3.8e-05 Score=77.84 Aligned_cols=36 Identities=19% Similarity=0.511 Sum_probs=33.2
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
.+||+|||||++|+++|+.|++. |.+|+|+|+.+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~----G~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ----GVKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCCC
Confidence 58999999999999999999998 9999999987643
No 164
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.61 E-value=4.4e-05 Score=81.65 Aligned_cols=59 Identities=24% Similarity=0.341 Sum_probs=42.9
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCC--CCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHH
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPT--LKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLF 574 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~--~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l 574 (595)
+.+||+||||||+|+++|+.|++... ..|++|+|+|+.+....+ ..++..+++.+++.|
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~-------~~~g~~l~~~~l~~l 94 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH-------TLSGACLDPRAFEEL 94 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT-------CCCCCEECTHHHHHH
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc-------cccccccCHHHHHHH
Confidence 46899999999999999999987410 127999999998643210 123446777777765
No 165
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.61 E-value=6.2e-05 Score=78.08 Aligned_cols=70 Identities=21% Similarity=0.195 Sum_probs=47.5
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC--C--CCCCCCchh---hccHhHHHHHHHcCCc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS--K--SSSYSNRVS---SINSSSKQLFETIGAW 580 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~--~--~~~~~~r~~---~l~~~~~~~l~~lg~~ 580 (595)
+..+||+|||||++|+++|+.|++. |.+|+|+|+.+...-... . ...++.-+. ...+...++++++|+-
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKA----GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 4568999999999999999999998 999999998763211100 0 000010011 1246778899999985
Q ss_pred c
Q psy9964 581 D 581 (595)
Q Consensus 581 ~ 581 (595)
.
T Consensus 79 ~ 79 (453)
T 2yg5_A 79 T 79 (453)
T ss_dssp E
T ss_pred c
Confidence 3
No 166
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=97.60 E-value=1.6e-05 Score=78.27 Aligned_cols=42 Identities=26% Similarity=0.321 Sum_probs=36.5
Q ss_pred CCccEEEeCCCChhhcCCcHHHHHhcCCCccEEEcCccchhhHHHHH
Q psy9964 59 DMIDCLIISHFHLDHCGALPYFTEMFGYAGPIYMTHPTKAIAPILLE 105 (595)
Q Consensus 59 ~~i~~i~lTH~H~DH~~g~~~l~~~~~~~~~v~~~~~~~~~~~~~l~ 105 (595)
.+|++|||||+|.||++|++++. +++||++..+..++...+.
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l~-----~~pVy~s~~t~~ll~~~l~ 64 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSSTW-----ARPLYCSPITAHLLHRHLQ 64 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTTC-----CSCEEECHHHHHHHHHHHC
T ss_pred CCCCEEEECCChHHHHCchHHHc-----CCCEEecHHHHHHHHHhhh
Confidence 57999999999999999999964 4899999999888877653
No 167
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.59 E-value=7.6e-05 Score=72.64 Aligned_cols=70 Identities=21% Similarity=0.190 Sum_probs=49.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWD 581 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~ 581 (595)
..+||+|||||++|+++|+.|++.. +|.+|+|+|+.+....... ......+...+.+...++|+++|+.-
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~--~g~~V~v~e~~~~~ggg~~-~~g~~~~~~~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNR--PDLKVCIIESSVAPGGGSW-LGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSSSCCTTTT-CCGGGCCCEEEETTTHHHHHHTTCCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcC--CCCeEEEEecCcccccccc-ccCcccchhhhhhHHHHHHHhhCccc
Confidence 4689999999999999999999751 3799999998764321000 01112334456677889999998753
No 168
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.59 E-value=7.2e-05 Score=78.56 Aligned_cols=70 Identities=17% Similarity=0.232 Sum_probs=48.4
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC----CCCCCC--Cc-hhhccHhHHHHHHHcCCcccc
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS----KSSSYS--NR-VSSINSSSKQLFETIGAWDHI 583 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~----~~~~~~--~r-~~~l~~~~~~~l~~lg~~~~~ 583 (595)
+||+|||||++|+++|+.|++. |++|+|+|+.+...-... ....++ +. .....+...++++++|+.+.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~----g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~ 115 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA----GFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNAL 115 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCE
T ss_pred CCEEEECCcHHHHHHHHHHHHC----CCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCccee
Confidence 7999999999999999999998 999999998763221000 000000 00 112357888999999986554
Q ss_pred c
Q psy9964 584 E 584 (595)
Q Consensus 584 ~ 584 (595)
.
T Consensus 116 ~ 116 (495)
T 2vvm_A 116 S 116 (495)
T ss_dssp E
T ss_pred e
Confidence 3
No 169
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.58 E-value=4.7e-05 Score=75.73 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.5
Q ss_pred ecEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~ 548 (595)
+||+|||||++|+++|+.|++ . |++|+|+|+.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~----G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG----PLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C----CEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC----CceEEEEECCCC
Confidence 489999999999999999999 7 999999998753
No 170
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.57 E-value=0.00018 Score=64.12 Aligned_cols=67 Identities=7% Similarity=0.042 Sum_probs=58.3
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcCCC
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMNVQ 240 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~ 240 (595)
+...++.+.|.+.+++.|++++++ +|++++. +++.+.|++++| ++++|+||.|+|.+|.+++.++++
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~---~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRD---MGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEE---CSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEE---cCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCC
Confidence 456789999999998899999999 9999985 455688999888 899999999999999998887653
No 171
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.55 E-value=4.7e-05 Score=79.99 Aligned_cols=36 Identities=33% Similarity=0.580 Sum_probs=32.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+...
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~----G~~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGR----GLSVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCCEEEEECCCC
Confidence 468999999999999999999998 999999999763
No 172
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.52 E-value=0.0011 Score=67.18 Aligned_cols=70 Identities=7% Similarity=0.077 Sum_probs=57.9
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCC-chhhhhcCCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGAR-SQVRNAMNVQ 240 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~-S~vR~~l~~~ 240 (595)
..++...+.+.|.+.+.+.|++|+++++|++++. ++++++|+..+| +++||.||.|+|.+ +.+++.++..
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~---~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 218 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVP---DADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGAR 218 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---ETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEE---cCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCC
Confidence 4567778899999999889999999999999986 345688877665 79999999999998 5677777653
No 173
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.52 E-value=5.4e-05 Score=80.82 Aligned_cols=39 Identities=15% Similarity=0.362 Sum_probs=35.0
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
....+||||||||++|+++|+.|++. |.+|+|||+.+..
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~----G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA----GANVILVDKAPFS 156 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSSS
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCCC
Confidence 34578999999999999999999998 9999999998743
No 174
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.52 E-value=7.6e-05 Score=74.51 Aligned_cols=63 Identities=16% Similarity=0.159 Sum_probs=43.0
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCC------ceEEEecCCCCcccCCCC------C---CCCCCchhhccHhHHHHHH
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKD------LSILMIESGPEKSLHFSK------S---SSYSNRVSSINSSSKQLFE 575 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~------~~v~~~e~~~~~~~~~~~------~---~~~~~r~~~l~~~~~~~l~ 575 (595)
.||+|||||++|+++|+.|+++ | .+|+|+|+.+........ + ...+.+...++..+.+.|+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~----G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHER----YHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLL 76 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----HTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHh----ccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHH
Confidence 3899999999999999999998 7 999999998632211000 0 1112344456666777776
Q ss_pred Hc
Q psy9964 576 TI 577 (595)
Q Consensus 576 ~l 577 (595)
++
T Consensus 77 ~~ 78 (351)
T 3g3e_A 77 SH 78 (351)
T ss_dssp TT
T ss_pred HH
Confidence 64
No 175
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.50 E-value=0.00011 Score=76.80 Aligned_cols=70 Identities=16% Similarity=0.285 Sum_probs=47.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCCCcccCCC---CCCC--CC--Cchhh----ccHhHHHHHHHc
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGPEKSLHFS---KSSS--YS--NRVSS----INSSSKQLFETI 577 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~~~~~~~~---~~~~--~~--~r~~~----l~~~~~~~l~~l 577 (595)
+||+|||||++|+++|+.|++. |. +|+|+|+.+...-... .... ++ ++... -.+...++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~----G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~l 78 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA----PCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSEL 78 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS----SSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHT
T ss_pred ceEEEECCcHHHHHHHHHHHhC----CCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHc
Confidence 5999999999999999999998 98 9999998763221100 0001 11 12111 134567999999
Q ss_pred CCccccc
Q psy9964 578 GAWDHIE 584 (595)
Q Consensus 578 g~~~~~~ 584 (595)
|+-+.+.
T Consensus 79 gl~~~~~ 85 (477)
T 3nks_A 79 GLDSEVL 85 (477)
T ss_dssp TCGGGEE
T ss_pred CCcceee
Confidence 9976543
No 176
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.50 E-value=7.1e-05 Score=77.53 Aligned_cols=36 Identities=22% Similarity=0.455 Sum_probs=33.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||||||||++|+++|+.|++. |++|+|+|+++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~----G~~V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD----GKKVLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCCC
Confidence 468999999999999999999999 999999999864
No 177
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.50 E-value=3.4e-05 Score=82.29 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=32.8
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+||+|||||++|+++|+.|++. |++|+|||+...
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r----G~~V~LlE~~~~ 66 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS----GIKTGLIEMQDF 66 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCCC
Confidence 58999999999999999999998 999999998763
No 178
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.49 E-value=7.1e-05 Score=74.13 Aligned_cols=37 Identities=27% Similarity=0.415 Sum_probs=33.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~ 39 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMR----GLSFRFVDPLPE 39 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSSS
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCC
Confidence 4568999999999999999999998 999999998763
No 179
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.49 E-value=5.4e-05 Score=76.42 Aligned_cols=35 Identities=14% Similarity=0.319 Sum_probs=32.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|+ + |.+|+|+|+.+
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~----G~~V~vlE~~~ 41 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-A----HGRVVVLEREA 41 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-T----TSCEEEECSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-C----CCCEEEEECCC
Confidence 35689999999999999999999 6 89999999985
No 180
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.49 E-value=7.6e-05 Score=66.53 Aligned_cols=33 Identities=33% Similarity=0.688 Sum_probs=31.5
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+||+|||||++|+.+|..|++. |.+|+|+|+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~----g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA----GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 6999999999999999999998 99999999876
No 181
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.48 E-value=7.1e-05 Score=74.68 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=33.7
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
|..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~----g~~v~vie~~~~ 37 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS----GLSYVILDAEAS 37 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS----SCCEEEECCSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCCC
Confidence 4568999999999999999999998 999999998763
No 182
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.48 E-value=6.4e-05 Score=77.42 Aligned_cols=33 Identities=30% Similarity=0.669 Sum_probs=31.4
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+||+|||||++|+++|+.|++. |.+|+|+|+++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~----G~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA----GKKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT----TCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHc----CCeEEEEecCC
Confidence 6999999999999999999999 99999999865
No 183
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.47 E-value=6.4e-05 Score=78.81 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=31.5
Q ss_pred cCCCCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 504 SSLGGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 504 ~~~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+...|+.+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 19 ~~~~m~~~dVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~ 58 (491)
T 3urh_A 19 YFQSMMAYDLIVIGSGPGGYVCAIKAAQL----GMKVAVVEKRS 58 (491)
T ss_dssp -------CCEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred chhhcccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCC
Confidence 34446679999999999999999999998 99999999865
No 184
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.47 E-value=0.00012 Score=76.79 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=33.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~----g~~v~v~E~~~~ 45 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKA----GYKVTVLEARTR 45 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeccCC
Confidence 3467999999999999999999998 999999998764
No 185
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.46 E-value=7.4e-05 Score=78.68 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=34.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||||||+|++|+++|+.|++. |.+|+|||+.+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~----G~~V~vlEk~~~ 75 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA----GADVLVLERTSG 75 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCC
Confidence 3578999999999999999999998 999999999874
No 186
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.46 E-value=0.00079 Score=73.47 Aligned_cols=64 Identities=9% Similarity=0.129 Sum_probs=56.9
Q ss_pred ceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 166 SYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 166 ~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
+..+....+.+.|.+.+++.|++|+++++|++++. +++++.|++.+|.+++||.||.|+|.+|.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~---~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSR---KDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---ETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEE---eCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 45667788999999999989999999999999986 45678999999889999999999999986
No 187
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.45 E-value=6.8e-05 Score=78.87 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=33.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+||||||+|+++|+.|++. |++|+|+|+++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~----G~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM----GFNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT----TCCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEEccCc
Confidence 457999999999999999999998 999999999863
No 188
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.42 E-value=0.00011 Score=80.20 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~----G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR----GWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 348999999999999999999998 99999999864
No 189
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.41 E-value=0.00011 Score=73.86 Aligned_cols=73 Identities=18% Similarity=0.358 Sum_probs=50.4
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC--C-CC-----CCCCchh-hccHhHHHHHHHc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS--K-SS-----SYSNRVS-SINSSSKQLFETI 577 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~--~-~~-----~~~~r~~-~l~~~~~~~l~~l 577 (595)
....+||+|||||++|+++|+.|++. |.+|+|+|+++....... . .. .+.+... .-.+...++++++
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~ 101 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASS----GQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRF 101 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTS
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHC----CCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHh
Confidence 34578999999999999999999998 999999998764211100 0 00 1111211 2346788999999
Q ss_pred CCcccc
Q psy9964 578 GAWDHI 583 (595)
Q Consensus 578 g~~~~~ 583 (595)
|.|...
T Consensus 102 ~~~~~~ 107 (397)
T 3hdq_A 102 TEWRPY 107 (397)
T ss_dssp CCEEEC
T ss_pred hhcccc
Confidence 987643
No 190
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.41 E-value=9.3e-05 Score=75.99 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.8
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+||+|||||++|+++|+.|+++ |.+|+|+|+++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~----G~~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA----GHEVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC----CCceEEEeCCCC
Confidence 4899999999999999999998 999999999764
No 191
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.41 E-value=0.0001 Score=73.93 Aligned_cols=36 Identities=36% Similarity=0.477 Sum_probs=33.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~ 48 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN----NISCRIIESMPQ 48 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCCEEEEecCCC
Confidence 468999999999999999999998 999999998763
No 192
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.40 E-value=0.00011 Score=73.88 Aligned_cols=36 Identities=22% Similarity=0.466 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
|..+||+|||||++|+++|..|++. |. +|+|+|+.+
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~----g~~~v~lie~~~ 38 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDF----GITDVIILEKGT 38 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHc----CCCcEEEEecCC
Confidence 4578999999999999999999998 98 999999875
No 193
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.40 E-value=8.7e-05 Score=73.48 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=32.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+.+||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA----EIKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCCEEEEecCC
Confidence 4568999999999999999999998 99999999965
No 194
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.40 E-value=6.3e-05 Score=77.92 Aligned_cols=36 Identities=22% Similarity=0.413 Sum_probs=33.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecC-CC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIES-GP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~-~~ 547 (595)
|..+||+|||||++|+++|+.|++. | .+|+|+|+ ..
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~----G~~~V~vlE~~~~ 58 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVW----SGGSVLVVDAGHA 58 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHH----HCSCEEEEESSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEccCCC
Confidence 4678999999999999999999998 9 99999998 44
No 195
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.39 E-value=0.00011 Score=80.32 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~----G~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR----GAVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT----TCCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 458999999999999999999998 99999999864
No 196
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.39 E-value=0.00011 Score=71.20 Aligned_cols=35 Identities=29% Similarity=0.630 Sum_probs=32.3
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA----RKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCCEEEEeCCCc
Confidence 37999999999999999999998 999999998764
No 197
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.39 E-value=0.00012 Score=72.05 Aligned_cols=35 Identities=29% Similarity=0.546 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~ 49 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARS----GFSVAILDKAV 49 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC----CCcEEEEeCCC
Confidence 468999999999999999999998 99999999854
No 198
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.39 E-value=0.0001 Score=77.84 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=33.9
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~~~~ 548 (595)
+..+||+|||||++||++|+.|++. | .+|+|+|+++.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~----G~~~V~VlEa~~r 43 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN----GIQDCLVLEARDR 43 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT----TCCSEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc----CCCCEEEEeCCCC
Confidence 5578999999999999999999998 9 99999998763
No 199
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.37 E-value=0.00013 Score=78.08 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=34.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~----G~~V~vlEk~~~ 160 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS----GAKVILIEKEPV 160 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCCC
Confidence 4578999999999999999999998 999999999874
No 200
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.36 E-value=0.0014 Score=71.68 Aligned_cols=64 Identities=9% Similarity=0.066 Sum_probs=55.3
Q ss_pred ceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc-EEEecEEEEecCCCch
Q psy9964 166 SYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE-SIECKLLLGTDGARSQ 232 (595)
Q Consensus 166 ~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~-~~~adlvVgADG~~S~ 232 (595)
+..++...+.+.|.+.+.+.|++|+++++|++++. +++++.|++.+|+ +++||.||.|+|.+|.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~---~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKR---IDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEE---CSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEE---eCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 34567788999999999889999999999999996 4556899999987 8999999999999975
No 201
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.35 E-value=9.2e-05 Score=77.87 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+|||||||++||++|+.|+++ |++|+|+|+++.
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~----G~~V~VlEa~~~ 35 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAA----GIPVLLLEQRDK 35 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHT----TCCEEEECCC--
T ss_pred CEEEECCcHHHHHHHHHHHHC----CCcEEEEccCCC
Confidence 699999999999999999999 999999999774
No 202
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.35 E-value=0.00012 Score=76.54 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGAL----GKRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----cCEEEEEeCCC
Confidence 368999999999999999999998 99999999843
No 203
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.35 E-value=0.00015 Score=71.44 Aligned_cols=36 Identities=44% Similarity=0.654 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~ 41 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRA----QLSTLILEKGM 41 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHc----CCcEEEEeCCC
Confidence 4568999999999999999999998 99999999874
No 204
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.33 E-value=0.00013 Score=74.76 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=31.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~----G~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN----GHEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCC
Confidence 899999999999999999998 999999998763
No 205
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.33 E-value=0.00014 Score=78.56 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=33.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+||||||||++|+++|+.|++. |.+|+|||+.+.
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~----G~~V~vlEK~~~ 39 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQK----GLSTIVLSLIPV 39 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTT----TCCEEEECSSCG
T ss_pred cccccEEEECchHHHHHHHHHHHHC----CCcEEEEeccCC
Confidence 3468999999999999999999998 999999999764
No 206
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.32 E-value=0.00013 Score=77.52 Aligned_cols=35 Identities=34% Similarity=0.518 Sum_probs=32.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||||||||++|+++|++|++. |.+|+|+|+.+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM----GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC----CCCEEEEeecc
Confidence 468999999999999999999998 99999999874
No 207
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.32 E-value=0.00017 Score=70.82 Aligned_cols=34 Identities=29% Similarity=0.312 Sum_probs=32.1
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
+.+||+|||||++|+++|+.|++. |++|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY----MLKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHC----CCcEEEEecc
Confidence 468999999999999999999998 9999999987
No 208
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.31 E-value=0.00059 Score=70.44 Aligned_cols=68 Identities=18% Similarity=0.260 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCc-----------hhhhhcC
Q psy9964 171 NDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARS-----------QVRNAMN 238 (595)
Q Consensus 171 R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S-----------~vR~~l~ 238 (595)
...+.+.|.+.+.+.|++|+++++|+++.. +++. +.|++.+|++++||.||.|+|.+| .+++.+|
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~---~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G 209 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY---ENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAG 209 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE---ETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe---cCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCC
Confidence 577889999999889999999999999986 2344 788889998899999999999999 8888887
Q ss_pred CCC
Q psy9964 239 VQY 241 (595)
Q Consensus 239 ~~~ 241 (595)
...
T Consensus 210 ~~~ 212 (447)
T 2i0z_A 210 HTI 212 (447)
T ss_dssp CCE
T ss_pred CCc
Confidence 653
No 209
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.31 E-value=0.00014 Score=77.76 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=33.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
..+||||||||++|+++|+.|++. |.+|+|||+.+..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~----G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS----GQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC----CCcEEEEecCCCC
Confidence 468999999999999999999998 9999999998643
No 210
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.30 E-value=0.00027 Score=72.70 Aligned_cols=36 Identities=25% Similarity=0.535 Sum_probs=33.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||+|++|+++|+.|++. |.+|+|+|+++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~----g~~v~~~e~~~~ 40 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVN----GKKVLHMDRNPY 40 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEecCCC
Confidence 468999999999999999999998 999999998763
No 211
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.30 E-value=0.00015 Score=75.31 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=32.3
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~----G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL----GKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC----CCEEEEEeCCC
Confidence 468999999999999999999998 99999999843
No 212
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.30 E-value=0.00015 Score=76.81 Aligned_cols=35 Identities=31% Similarity=0.438 Sum_probs=32.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||||||||++|+++|++|++. |.+|+|+|+.+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~----G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM----GAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT----TCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCCEEEEEecc
Confidence 468999999999999999999998 99999999874
No 213
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.29 E-value=0.00012 Score=76.35 Aligned_cols=35 Identities=37% Similarity=0.398 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~----G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL----GFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCeEEEEecCC
Confidence 468999999999999999999998 99999999865
No 214
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.29 E-value=0.00017 Score=71.21 Aligned_cols=36 Identities=39% Similarity=0.525 Sum_probs=32.9
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~~~ 41 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR----QASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHC----CCCEEEEEcCCC
Confidence 357999999999999999999998 999999999763
No 215
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.29 E-value=0.00015 Score=76.97 Aligned_cols=36 Identities=36% Similarity=0.572 Sum_probs=32.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
...|||+|||||++|+++|++|++. |.+|+|+|+.+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~----G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARG----GLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHC----CCcEEEEEecc
Confidence 3468999999999999999999998 99999999874
No 216
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.28 E-value=0.00014 Score=76.08 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=32.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~----G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKH----TDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT----CSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCC
Confidence 358999999999999999999998 99999999875
No 217
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.28 E-value=0.00015 Score=71.26 Aligned_cols=35 Identities=29% Similarity=0.344 Sum_probs=32.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
|+.+||+|||||++|+++|+.|++. |++|+|+|+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~ 37 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARA----NLQPVLITGM 37 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTT----TCCCEEECCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEccC
Confidence 4568999999999999999999998 9999999965
No 218
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.27 E-value=0.00013 Score=76.11 Aligned_cols=35 Identities=31% Similarity=0.386 Sum_probs=32.9
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+.|||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~----G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL----GLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH----TCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC----CCEEEEEeCCC
Confidence 468999999999999999999998 99999999876
No 219
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.26 E-value=0.00018 Score=74.85 Aligned_cols=35 Identities=37% Similarity=0.418 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~ 36 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQL----GLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC
Confidence 468999999999999999999998 99999999873
No 220
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.26 E-value=0.00012 Score=72.41 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=31.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIES 545 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~ 545 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~----g~~v~lie~ 39 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARA----ELKPLLFEG 39 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT----TCCCEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCeEEEEec
Confidence 4568999999999999999999998 999999998
No 221
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.25 E-value=0.00012 Score=78.40 Aligned_cols=36 Identities=33% Similarity=0.297 Sum_probs=33.1
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCC--ceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKD--LSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~--~~v~~~e~~~~ 548 (595)
..+||||||||++|+++|+.|++. | .+|+|||+.+.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~----G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQA----NPNAKIALISKVYP 41 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH----CTTCCEEEEESSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhc----CCCCcEEEEeCCCC
Confidence 468999999999999999999998 8 99999999764
No 222
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.24 E-value=0.00055 Score=69.68 Aligned_cols=71 Identities=6% Similarity=0.110 Sum_probs=55.1
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEe---------EEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc-hhhh-
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVA---------HYELPEQPLNNVKIKFESGESIECKLLLGTDGARS-QVRN- 235 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~---------~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S-~vR~- 235 (595)
..++...+.+.|.+.+.+.|++++++++|+ +++. +++.+.|++.+| +++||.||.|+|.+| .+++
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~---~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~ 242 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV---TNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQ 242 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEECCGGGHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe---eCCeEEEEECCc-EEECCEEEECCCccHHHHHHH
Confidence 456788899999999998999999999999 8875 345567777677 799999999999999 7888
Q ss_pred hcCCCC
Q psy9964 236 AMNVQY 241 (595)
Q Consensus 236 ~l~~~~ 241 (595)
.++...
T Consensus 243 ~~g~~~ 248 (405)
T 3c4n_A 243 GLGLHT 248 (405)
T ss_dssp HHCCCC
T ss_pred hcCCCC
Confidence 777543
No 223
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.24 E-value=0.00024 Score=73.46 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~ 547 (595)
..+||+|||||++|+++|..|++. |. +|+|+|+.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~----G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE----KAFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT----TCCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc----CCCCCeEEEecCC
Confidence 467999999999999999999998 98 999999875
No 224
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.23 E-value=0.00018 Score=76.12 Aligned_cols=37 Identities=41% Similarity=0.742 Sum_probs=32.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+||+||||+|.+|+.+|..|++. ++++|+|||+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~---~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED---PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC---CCCeEEEEcCCCC
Confidence 479999999999999999999984 2899999999864
No 225
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.23 E-value=0.00019 Score=76.85 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=33.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||||||||++|+++|+.|++. |.+|+|||+.+.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~----G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA----GFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHC----CCcEEEEeccCC
Confidence 468999999999999999999998 999999999764
No 226
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.23 E-value=0.0002 Score=73.46 Aligned_cols=68 Identities=13% Similarity=0.194 Sum_probs=45.9
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecCCCCcccCCC----CCCCCC--Cch-hhccHhHHHHHHHcCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIESGPEKSLHFS----KSSSYS--NRV-SSINSSSKQLFETIGAW 580 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~~~~~~~~~~----~~~~~~--~r~-~~l~~~~~~~l~~lg~~ 580 (595)
+.+||+|||||++|+++|+.|++. | .+|+|+|+.+...-... ....++ +.. ....+...++++++|+-
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~----g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~ 80 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA----GFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDK 80 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCc
Confidence 467999999999999999999998 9 89999998763211000 000011 111 11236678889999863
No 227
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.23 E-value=0.00019 Score=75.77 Aligned_cols=69 Identities=19% Similarity=0.242 Sum_probs=46.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC---C--CCCCCCchh---hccHhHHHHHHHcCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS---K--SSSYSNRVS---SINSSSKQLFETIGAW 580 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~---~--~~~~~~r~~---~l~~~~~~~l~~lg~~ 580 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+++...-... . ...++.-+. .......++++++|+-
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~----G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 78 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS----GLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLE 78 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT----TCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCc
Confidence 357999999999999999999998 999999998764321100 0 001111111 1246678899999975
Q ss_pred c
Q psy9964 581 D 581 (595)
Q Consensus 581 ~ 581 (595)
.
T Consensus 79 ~ 79 (520)
T 1s3e_A 79 T 79 (520)
T ss_dssp E
T ss_pred c
Confidence 4
No 228
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.22 E-value=0.00057 Score=69.64 Aligned_cols=68 Identities=10% Similarity=0.287 Sum_probs=58.3
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc-----------hhhhhc
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARS-----------QVRNAM 237 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S-----------~vR~~l 237 (595)
..+..+.+.|.+.+++.|++|+++++|++++. +++++.|++.+| +++||.||.|+|.+| .+.+.+
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~---~~~~~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~ 204 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVER---TASGFRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQF 204 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHC
Confidence 45778999999999889999999999999986 456789999888 899999999999999 466666
Q ss_pred CCC
Q psy9964 238 NVQ 240 (595)
Q Consensus 238 ~~~ 240 (595)
|..
T Consensus 205 G~~ 207 (417)
T 3v76_A 205 GLP 207 (417)
T ss_dssp TCC
T ss_pred CCC
Confidence 644
No 229
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.22 E-value=0.00022 Score=74.15 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~----G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA----KYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC----CCeEEEEECCC
Confidence 468999999999999999999998 99999999665
No 230
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.22 E-value=0.00019 Score=73.13 Aligned_cols=39 Identities=28% Similarity=0.500 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|+++. +|++|+|||+...
T Consensus 34 ~~~~dVvIIGaGi~Gls~A~~La~~~--pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 34 EEAFDIVVIGAGRMGAACAFYLRQLA--PGRSLLLVEEGGL 72 (405)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHC--TTSCEEEECSSCS
T ss_pred cCcCCEEEECCcHHHHHHHHHHHhcC--CCCeEEEEeCCCC
Confidence 34689999999999999999999751 3899999998753
No 231
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.21 E-value=0.00036 Score=73.21 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=33.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~----g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA----GHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH----TCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECCCC
Confidence 457999999999999999999998 999999998763
No 232
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.18 E-value=0.00024 Score=71.23 Aligned_cols=69 Identities=16% Similarity=0.295 Sum_probs=46.3
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC--CCCC-----CCCchh-hccHhHHHHHHHcCCccc
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS--KSSS-----YSNRVS-SINSSSKQLFETIGAWDH 582 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~--~~~~-----~~~r~~-~l~~~~~~~l~~lg~~~~ 582 (595)
+||+|||||++|+++|+.|++. |.+|+|+|+++....... .... +.+... .-.+...++++++|.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~ 77 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL----NKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR 77 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG----TCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC
T ss_pred CCEEEECcCHHHHHHHHHHHhC----CCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCCHHHHHHHHHhhhhhh
Confidence 6999999999999999999998 999999998763211100 0000 111111 123567788888887654
Q ss_pred c
Q psy9964 583 I 583 (595)
Q Consensus 583 ~ 583 (595)
.
T Consensus 78 ~ 78 (367)
T 1i8t_A 78 F 78 (367)
T ss_dssp C
T ss_pred c
Confidence 3
No 233
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.18 E-value=0.00027 Score=69.69 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=31.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+||+|||||++|+.+|+.|++. |.+|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~----G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL----GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC----CCcEEEEeccCC
Confidence 5899999999999999999999 999999998773
No 234
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.17 E-value=0.00028 Score=71.23 Aligned_cols=71 Identities=14% Similarity=0.206 Sum_probs=48.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC---CC-CC-----CCCchh-hccHhHHHHHHHcC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS---KS-SS-----YSNRVS-SINSSSKQLFETIG 578 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~---~~-~~-----~~~r~~-~l~~~~~~~l~~lg 578 (595)
+.+||+|||||++|+++|+.|++. |.+|+|+|+++...-... .. .. +.+... .-.+...++++++|
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~----g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~ 77 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEK----GHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHA 77 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC----CCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHh
Confidence 357999999999999999999998 999999998764221100 00 11 111211 23477888999999
Q ss_pred Ccccc
Q psy9964 579 AWDHI 583 (595)
Q Consensus 579 ~~~~~ 583 (595)
.|...
T Consensus 78 ~~~~~ 82 (384)
T 2bi7_A 78 EMMPY 82 (384)
T ss_dssp CEEEC
T ss_pred hhccc
Confidence 87543
No 235
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.17 E-value=0.00025 Score=69.30 Aligned_cols=33 Identities=24% Similarity=0.430 Sum_probs=31.0
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
+||+|||||++|+++|+.|++. |. +|+|+|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~----g~~~v~lie~~~ 35 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG----GVKNAVLFEKGM 35 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT----TCSSEEEECSSS
T ss_pred ceEEEECccHHHHHHHHHHHHC----CCCcEEEEcCCC
Confidence 6999999999999999999998 99 999999864
No 236
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.15 E-value=0.00031 Score=74.01 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=33.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..|||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~----G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQY----GKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeccC
Confidence 3569999999999999999999998 99999999865
No 237
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.14 E-value=0.00025 Score=74.00 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=33.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~----G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL----GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecCC
Confidence 3568999999999999999999998 99999999765
No 238
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.13 E-value=0.00032 Score=68.46 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=31.1
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~v~li~~~~ 34 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK----GIRTGLMGERF 34 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT----TCCEEEECSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 37999999999999999999998 99999998753
No 239
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.11 E-value=0.00033 Score=75.77 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=32.7
Q ss_pred ceecEEEECCChHHHHHHHHHh---c-CCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIA---Q-NPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~---~-~~~~~~~~v~~~e~~~~ 548 (595)
..+||||||||++|+++|+.|+ + . |.+|+|||+.+.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~----G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG----GLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT----TCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC----CCeEEEEeCcCC
Confidence 4589999999999999999999 6 7 999999999874
No 240
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.11 E-value=0.00025 Score=70.16 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=32.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA----QLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT----TCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEecC
Confidence 4568999999999999999999998 9999999965
No 241
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.11 E-value=0.00038 Score=73.78 Aligned_cols=38 Identities=42% Similarity=0.809 Sum_probs=33.9
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
....||+||||||.+|+++|..|+.. ++.+|+|||+++
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~---~~~~VLlLEaG~ 53 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTEN---PNISVLVIESGS 53 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTS---TTCCEEEECSSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhC---CCCcEEEEecCC
Confidence 34579999999999999999999975 289999999987
No 242
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.10 E-value=0.00033 Score=75.26 Aligned_cols=37 Identities=35% Similarity=0.537 Sum_probs=33.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
..+||+|||||++|+++|+.|++. |++|+|||+.+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~----G~~V~liE~~~~~ 81 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA----GYKVAMFDIGEID 81 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC----CCcEEEEeccCCC
Confidence 468999999999999999999998 9999999997743
No 243
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.09 E-value=0.00033 Score=73.08 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=32.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASY----GAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----SCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 3468999999999999999999998 99999999875
No 244
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.09 E-value=0.00033 Score=74.36 Aligned_cols=36 Identities=28% Similarity=0.473 Sum_probs=33.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..||+||||+|++|+++|..|++. |++|+|||+++.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~----g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA----GKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCCC
Confidence 468999999999999999999998 999999999874
No 245
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.08 E-value=0.00042 Score=73.48 Aligned_cols=37 Identities=41% Similarity=0.790 Sum_probs=33.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~~~~ 548 (595)
...||+||||||.+|+++|..|+.. + .+|+|||+++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~----~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAEN----PNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTS----TTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhC----CCCcEEEEecCCC
Confidence 3569999999999999999999998 5 89999999875
No 246
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.07 E-value=0.00024 Score=73.86 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=33.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCC-----ceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKD-----LSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-----~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. | ++|+|+|+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~----g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER----AQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH----HHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc----ccccCcccEEEEecCCC
Confidence 468999999999999999999998 8 99999999874
No 247
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.07 E-value=0.0004 Score=73.59 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=33.7
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~~ 50 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL----GRSVHVIETAGD 50 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCCC
Confidence 4578999999999999999999998 999999998753
No 248
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.07 E-value=0.00038 Score=73.51 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=32.9
Q ss_pred CceecEEEECCChHHHHHHHHHh-cCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIA-QNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~-~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|+ +. |++|+|+|+.+
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~----G~~v~viE~~~ 42 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHEL----GLTTVGFDKAD 42 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTT----CCCEEEEESSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcC----CCCEEEEECCC
Confidence 45689999999999999999999 77 99999999875
No 249
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.06 E-value=0.00036 Score=72.91 Aligned_cols=35 Identities=37% Similarity=0.547 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~----G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADE----GLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC
Confidence 368999999999999999999998 99999999854
No 250
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.06 E-value=0.00034 Score=78.26 Aligned_cols=36 Identities=31% Similarity=0.578 Sum_probs=32.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |. +|+|||+.+.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~----G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR----GWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT----TCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCcEEEEeCCCC
Confidence 357999999999999999999998 98 9999999874
No 251
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.05 E-value=0.00043 Score=73.03 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=33.9
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+..+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~----G~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAM----GGRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHC----CCCEEEEeCCC
Confidence 34568999999999999999999998 99999999876
No 252
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.05 E-value=0.00031 Score=73.18 Aligned_cols=36 Identities=36% Similarity=0.353 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~----g~~V~liE~~~ 39 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL----GFKTTCIEKRG 39 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH----TCCEEEEECSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 4568999999999999999999998 99999999875
No 253
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.04 E-value=0.00039 Score=72.35 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=32.1
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|+.|++. |.+|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL----GMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 47999999999999999999998 99999999875
No 254
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.04 E-value=0.0004 Score=72.35 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=33.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 39 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQL----GFKTVCIEKNE 39 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCC
Confidence 4568999999999999999999998 99999999875
No 255
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.02 E-value=0.0004 Score=72.17 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
||+|||||++|+++|+.|++. |.+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~----G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA----GKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT----TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC----CCCEEEEeCC
Confidence 899999999999999999998 9999999988
No 256
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.02 E-value=0.00043 Score=72.38 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.9
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
...|||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~----G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQL----GKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEEecc
Confidence 3579999999999999999999998 99999999744
No 257
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.01 E-value=0.00045 Score=71.75 Aligned_cols=36 Identities=36% Similarity=0.494 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
|..+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~----g~~V~lie~~~ 39 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQL----GLKVLAVEAGE 39 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHC----CCeEEEEeCCC
Confidence 3468999999999999999999998 99999999876
No 258
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.01 E-value=0.0005 Score=72.65 Aligned_cols=36 Identities=31% Similarity=0.584 Sum_probs=32.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|++ |.+|+|||+.+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-----G~~V~vlEk~~~ 41 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-----QHQVIVLSKGPV 41 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-----TSCEEEECSSCT
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-----CCcEEEEECCCC
Confidence 456899999999999999999976 689999999874
No 259
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.00 E-value=0.00049 Score=71.11 Aligned_cols=35 Identities=29% Similarity=0.353 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY----GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT----TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC----CCeEEEEcCCC
Confidence 468999999999999999999998 99999999874
No 260
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=97.00 E-value=0.0016 Score=65.02 Aligned_cols=72 Identities=14% Similarity=0.358 Sum_probs=60.5
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc--EEEecEEEEecCCCc-hhhhhc-CCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE--SIECKLLLGTDGARS-QVRNAM-NVQ 240 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~--~~~adlvVgADG~~S-~vR~~l-~~~ 240 (595)
..++...+.+.|.+.+++.|++|+++++|++++.+ ++..+.|++.+|+ +++||.||.|+|.+| .+.+.+ +.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 45778889999999999999999999999999862 3334889999884 899999999999998 667777 654
No 261
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.00 E-value=0.0031 Score=66.11 Aligned_cols=65 Identities=14% Similarity=0.253 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 238 (595)
..|-+.|.+.+++.|++|+++++|++|+.+ ++..+.|+++||++++||.||.+=+.....++.++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSCEEECCC----------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 457788889998899999999999999872 33334589999999999999977667767776664
No 262
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.00 E-value=0.00079 Score=62.63 Aligned_cols=66 Identities=14% Similarity=0.020 Sum_probs=55.5
Q ss_pred eHHHHHHHHHHHHhcC-CceEEeCCeEeEEecCCCCCCce-EEEEcCCcEEEecEEEEecCCCchhhhhcCC
Q psy9964 170 ENDLIIDAVTKKLNTL-NIDIVYQKKVAHYELPEQPLNNV-KIKFESGESIECKLLLGTDGARSQVRNAMNV 239 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~~-gv~i~~~~~v~~v~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l~~ 239 (595)
+|..+.+.|.+.+++. |++++ +++|++++. +++.+ .|++.+|+++++|+||.|+|.+|..|..+|.
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~---~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLL---EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE---ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEE---eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 6888999999999884 99998 579999986 23443 6888899899999999999999998877654
No 263
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.00 E-value=0.00047 Score=71.52 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+.+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF----GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC----CCcEEEEcCCC
Confidence 468999999999999999999998 99999999874
No 264
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.99 E-value=0.0015 Score=68.62 Aligned_cols=69 Identities=13% Similarity=0.211 Sum_probs=55.9
Q ss_pred eHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch----hhhhcCCC
Q psy9964 170 ENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ----VRNAMNVQ 240 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~----vR~~l~~~ 240 (595)
....+.+.|.+.+.+.|++|+++++|++++.. ++..+.|++.+|++++||+||.|||.+|. ..+..++.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 55778888999998899999999999999862 23334589999999999999999999995 44444554
No 265
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.99 E-value=0.00045 Score=72.44 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=32.1
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~----g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH----NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC----CCcEEEEeCCC
Confidence 48999999999999999999998 99999999875
No 266
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.98 E-value=0.006 Score=62.84 Aligned_cols=73 Identities=12% Similarity=0.250 Sum_probs=57.0
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCC------------CCCCce-EEEEcCCcEE--EecEEEEecCCCc
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPE------------QPLNNV-KIKFESGESI--ECKLLLGTDGARS 231 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~------------~~~~~v-~v~~~dG~~~--~adlvVgADG~~S 231 (595)
..++...+.+.|.+.+.+.|++|+++++|++++... .+++.+ .|+..+| ++ +||.||.|.|.+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 346777899999999988999999999999998400 023344 6778888 58 9999999999998
Q ss_pred h-hhhhcCCC
Q psy9964 232 Q-VRNAMNVQ 240 (595)
Q Consensus 232 ~-vR~~l~~~ 240 (595)
. +.+.++..
T Consensus 255 ~~l~~~~g~~ 264 (448)
T 3axb_A 255 NRLLNPLGID 264 (448)
T ss_dssp HHHHGGGTCC
T ss_pred HHHHHHcCCC
Confidence 7 77766643
No 267
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.98 E-value=0.00035 Score=68.27 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=31.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEE-ecCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILM-IESG 546 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~-~e~~ 546 (595)
..+||+|||||++|+++|+.|++. |.+|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG----GLKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH----TCSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC----CCCeEEEEeCC
Confidence 457999999999999999999998 999999 9984
No 268
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.97 E-value=0.00047 Score=71.43 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=31.8
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|..|++. |.+|+|+|+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL----GMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC----CCeEEEEeCCC
Confidence 37999999999999999999998 99999999875
No 269
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.97 E-value=0.00054 Score=72.45 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~----g~~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA----GMKVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC----CCCEEEEeCCC
Confidence 4568999999999999999999998 99999999975
No 270
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.96 E-value=0.00054 Score=71.20 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ----GAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCC
Confidence 468999999999999999999998 99999999874
No 271
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=96.96 E-value=0.0034 Score=66.60 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=57.1
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcC---C--cEEEecEEEEecCCCc-hhhhhcCCC
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFES---G--ESIECKLLLGTDGARS-QVRNAMNVQ 240 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~d---G--~~~~adlvVgADG~~S-~vR~~l~~~ 240 (595)
.++...|...|.+.+.+.|++|+++++|+++.. +++. +.|++.| | .+++||.||.|+|.+| .+++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~---~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIY---DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEE---ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE---cCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 567788999999999889999999999999986 2344 3466654 4 3799999999999999 778887654
No 272
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.95 E-value=0.0005 Score=71.82 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=32.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
+..|||+|||||++|+++|+.|++. |.+|+|+|+.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~----G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLN----GARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC----CCEEEEEEec
Confidence 4579999999999999999999998 9999999953
No 273
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.95 E-value=0.00048 Score=69.91 Aligned_cols=71 Identities=17% Similarity=0.309 Sum_probs=47.9
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCC---CC-CC--C---CCchh-hccHhHHHHHHHcCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFS---KS-SS--Y---SNRVS-SINSSSKQLFETIGA 579 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~---~~-~~--~---~~r~~-~l~~~~~~~l~~lg~ 579 (595)
.+||+|||||++|+++|+.|++. .|.+|+|+|+++...-... .+ .. + .+... .-.+...++++++|+
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~---~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~ 83 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ---LDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTD 83 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH---SCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHh---CCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhh
Confidence 68999999999999999999985 2799999998763211100 00 11 1 11111 124778899999998
Q ss_pred cccc
Q psy9964 580 WDHI 583 (595)
Q Consensus 580 ~~~~ 583 (595)
+...
T Consensus 84 ~~~~ 87 (399)
T 1v0j_A 84 FTDY 87 (399)
T ss_dssp BCCC
T ss_pred hhcc
Confidence 7543
No 274
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.95 E-value=0.00052 Score=71.56 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~~~~ 548 (595)
++.+||+|||||++|+++|+.|++. | .+|+|+|+.+.
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~----g~~~v~v~E~~~~ 44 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL----GYKNWHLYECNDT 44 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT----TCCSEEEEESSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc----CCCCEEEEeCCCC
Confidence 3468999999999999999999998 7 79999998863
No 275
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.94 E-value=0.00057 Score=72.34 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=32.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~----G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ----GLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC----CCCEEEEeCCC
Confidence 4568999999999999999999998 99999999865
No 276
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.91 E-value=0.00059 Score=70.66 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=32.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..+||+|||||++|+++|..|++. |.+|+|+|+..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~----g~~V~lie~~~ 36 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL----GQKVTIVEKGN 36 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT----TCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCeEEEEECCC
Confidence 358999999999999999999998 99999999873
No 277
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.85 E-value=0.00069 Score=70.17 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=32.7
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|..|++. |.+|+|+|+..
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~----g~~V~lie~~~ 38 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQL----GIPTVLVEGQA 38 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHH----TCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCEEEEEccCC
Confidence 3568999999999999999999998 99999999843
No 278
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.84 E-value=0.00059 Score=71.30 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=30.7
Q ss_pred ceecEEEECCChHHHHHHHHHhc-CCCCCCceEEEecC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ-NPTLKDLSILMIES 545 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~-~~~~~~~~v~~~e~ 545 (595)
..+||+|||||++|+++|+.|++ . |.+|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLH----KKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHc----CCEEEEEec
Confidence 35899999999999999999999 8 999999993
No 279
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.82 E-value=0.00075 Score=69.60 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.4
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~----G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK----GYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC----CCeEEEEeccCC
Confidence 3457999999999999999999998 999999998763
No 280
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.82 E-value=0.00051 Score=72.65 Aligned_cols=37 Identities=30% Similarity=0.668 Sum_probs=33.0
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
.||+||||||.+|+++|..|+.. ++.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~---~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED---PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS---TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC---cCCcEEEEecCCcc
Confidence 58999999999999999999984 28999999998743
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.80 E-value=0.00082 Score=70.79 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=32.5
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
+..+||+|||||++|+++|+.|++. |++|+|+|+..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~----G~~v~lie~~~ 245 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK----GIRTGLMGERF 245 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSST
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC----CCeEEEEECCC
Confidence 3468999999999999999999998 99999999754
No 282
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.80 E-value=0.00095 Score=70.22 Aligned_cols=35 Identities=29% Similarity=0.392 Sum_probs=32.5
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+|||+|||||++|.++|..+++. |.+|+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~----G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH----GARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT----TCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC----CCeEEEEeccc
Confidence 359999999999999999999999 99999999765
No 283
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.80 E-value=0.0007 Score=73.00 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=32.3
Q ss_pred ceecEEEECCChHHHHHHHHHhcCC--CCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNP--TLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~--~~~~~~v~~~e~~~~ 548 (595)
..+||||||||++|+++|+.|++.. ..+|.+|+|||+.+.
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 4689999999999999999998730 001789999998764
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.80 E-value=0.0008 Score=69.76 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=31.4
Q ss_pred ecEEEECCChHHHHHHHHHhc---CCCCCCce---EEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQ---NPTLKDLS---ILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~---v~~~e~~~~ 548 (595)
+||+|||||++|+++|..|++ . |++ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~----G~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK----GAEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT----TCCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc----CCCCCcEEEEEcCCC
Confidence 599999999999999999999 8 999 999998753
No 285
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.76 E-value=0.0011 Score=70.58 Aligned_cols=36 Identities=28% Similarity=0.446 Sum_probs=33.3
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||+|++|+++|+.|++. |.+|+|+|+.+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~----g~~v~~~e~~~~ 160 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA----GAKVILLEKEPI 160 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS----SCCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC----CCcEEEEecCCC
Confidence 467999999999999999999998 999999998774
No 286
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.75 E-value=0.00089 Score=73.17 Aligned_cols=36 Identities=22% Similarity=0.382 Sum_probs=33.3
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
...+||+|||||++|+++|+.|++. |++|+|+|+.+
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~----G~~V~liE~~~ 424 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR----GYDVVLAEAGR 424 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHC----CCeEEEEecCC
Confidence 4567999999999999999999998 99999999876
No 287
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.74 E-value=0.0094 Score=61.69 Aligned_cols=57 Identities=11% Similarity=0.245 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
.|.+.|.+.+.+ ++|+++++|++|+. ++++++|++.+|++++||.||.|-......+
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~---~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~ 292 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSH---SGSCYSLELDNGVTLDADSVIVTAPHKAAAG 292 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEE---CSSSEEEEESSSCEEEESEEEECSCHHHHHH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEE---cCCeEEEEECCCCEEECCEEEECCCHHHHHH
Confidence 344555554432 68999999999996 4567999999999999999999998776443
No 288
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.74 E-value=0.00091 Score=70.61 Aligned_cols=35 Identities=37% Similarity=0.698 Sum_probs=32.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..||+||||+|.+|+.+|..|++ |.+|+|||+++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-----g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-----KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-----TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-----CCcEEEEecCCC
Confidence 56999999999999999999987 679999999874
No 289
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.73 E-value=0.0011 Score=67.77 Aligned_cols=37 Identities=41% Similarity=0.597 Sum_probs=32.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCce--EEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLS--ILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~--v~~~e~~~~ 548 (595)
++.+||+|||||++|+++|..|++. |.+ |+|+|+.+.
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQN----GFEGRVLVIGREPE 45 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT----TCCSCEEEEESSSS
T ss_pred CCCCcEEEECChHHHHHHHHHHHcc----CcCCCEEEEecCCC
Confidence 3468999999999999999999998 766 999998764
No 290
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.73 E-value=0.0012 Score=67.87 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~~ 548 (595)
+.+||+|||||++|+++|..|++. |. +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~----g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS----GWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc----CcCCCEEEEECCCC
Confidence 357999999999999999999998 77 8999998763
No 291
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.69 E-value=0.0011 Score=67.92 Aligned_cols=34 Identities=35% Similarity=0.541 Sum_probs=31.4
Q ss_pred ecEEEECCChHHHHHHHHHhc--CCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQ--NPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~--~~~~~~~~v~~~e~~~~ 548 (595)
.||+|||||++|+++|+.|++ . |.+|+|+|+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~----g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP----DLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT----TCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC----CCeEEEECCCCC
Confidence 589999999999999999999 5 899999999874
No 292
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.68 E-value=0.0013 Score=70.07 Aligned_cols=39 Identities=38% Similarity=0.763 Sum_probs=34.8
Q ss_pred CCceecEEEECCChHHHHHHHHHhc-CCCCCCceEEEecCCCCc
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQ-NPTLKDLSILMIESGPEK 549 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~-~~~~~~~~v~~~e~~~~~ 549 (595)
.+..||+||||+|++|+++|..|++ . |.+|+|||+++..
T Consensus 21 ~~~~~d~iivG~G~~g~~~a~~l~~~~----~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 21 AGKTYDYIIAGGGLTGLTVAAKLTENP----KIKVLVIEKGFYE 60 (587)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHTST----TCCEEEEESSCCC
T ss_pred CcccCCEEEECcCHHHHHHHHHHHhCC----CCcEEEEecCCcc
Confidence 3567999999999999999999999 5 9999999998743
No 293
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.68 E-value=0.00096 Score=69.80 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=30.9
Q ss_pred ceecEEEECCChHHHHHHHHHhc-CCCCCCceEEEecC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ-NPTLKDLSILMIES 545 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~-~~~~~~~~v~~~e~ 545 (595)
..+||+|||||++|+++|+.|++ . |++|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~----G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLY----GKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHH----CCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhc----CCeEEEEec
Confidence 46899999999999999999999 8 999999994
No 294
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.65 E-value=0.0029 Score=64.99 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=54.8
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCC---eEeEEecCCCCCCceE-EEEcCCcEEEecEEEEecCCCch
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQK---KVAHYELPEQPLNNVK-IKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~---~v~~v~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..++...+.+.|.+.+++.|++|++++ +|++++. +++.++ |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~---~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF---ENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE---ETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe---cCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 455667888999999988999999999 9999986 355677 99999989999999999999985
No 295
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.64 E-value=0.0014 Score=66.05 Aligned_cols=34 Identities=32% Similarity=0.441 Sum_probs=30.8
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCC--ceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKD--LSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~--~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|..|++. | .+|+|+|+.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~----g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL----DGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT----CSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhh----CCCCCEEEEECCC
Confidence 57999999999999999999998 7 6799999876
No 296
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.63 E-value=0.021 Score=58.14 Aligned_cols=61 Identities=16% Similarity=0.255 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 238 (595)
..|-+.|.+.+++.|++|+++++|++++. +++++ | ..+|++++||.||-|-|.+... +.++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINI---EEKKV-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEET---TTTEE-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEE---ECCEE-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 46788899999889999999999999996 45567 5 5688899999999999988655 4554
No 297
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.63 E-value=0.049 Score=53.62 Aligned_cols=41 Identities=12% Similarity=0.258 Sum_probs=36.4
Q ss_pred CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCC
Q psy9964 186 NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGA 229 (595)
Q Consensus 186 gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~ 229 (595)
|++|+++++|++++. ++++++|++.+|+++++|.||.|-..
T Consensus 123 g~~i~~~~~V~~i~~---~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 123 GAEVYFRHRVTQINL---RDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp TCEEESSCCEEEEEE---CSSSEEEEESSSCCEEESEEEECSCH
T ss_pred CCEEEeCCEEEEEEE---cCCEEEEEECCCCEEEcCEEEECCCH
Confidence 789999999999996 56789999999988999999999753
No 298
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.63 E-value=0.001 Score=69.46 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=32.6
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCC---ceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKD---LSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~---~~v~~~e~~~~ 548 (595)
+.+||+|||||++|+++|..|++. | .+|+|+|+.+.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~----g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN----YGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----HGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc----CCCCCeEEEEECCCC
Confidence 458999999999999999999987 6 99999998763
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.59 E-value=0.0011 Score=67.41 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~ 548 (595)
+|+|||||++|+++|..|++ . |.+|+|+|+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~----g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS----KADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG----GSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC----CCeEEEEeCCCC
Confidence 79999999999999999999 7 899999998874
No 300
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.59 E-value=0.001 Score=72.97 Aligned_cols=36 Identities=19% Similarity=0.332 Sum_probs=33.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |.+|+|+|+.+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~----g~~v~v~E~~~~ 370 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF----GIKVTVLEAKDR 370 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEecccc
Confidence 457999999999999999999998 999999998663
No 301
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.57 E-value=0.0016 Score=65.18 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=30.6
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.||+|||||++|+++|..|++. | +|+|+|+.+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~----g-~V~lie~~~~ 41 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT----Y-EVTVIDKEPV 41 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT----S-EEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhc----C-CEEEEECCCC
Confidence 5999999999999999999988 8 9999998774
No 302
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.57 E-value=0.0014 Score=68.08 Aligned_cols=36 Identities=22% Similarity=0.446 Sum_probs=31.7
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|+.|++. |. +|+|+|+.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~----g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA----GITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT----TCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc----CCCceEEEeCCCC
Confidence 357999999999999999999998 98 8999998763
No 303
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.56 E-value=0.0014 Score=70.36 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=32.1
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
...+||+|||||++|+++|..|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~----g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY----GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT----TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC----CCeEEEEecc
Confidence 3468999999999999999999998 9999999973
No 304
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.54 E-value=0.0015 Score=67.46 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=32.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|..|++.. .+.+|+|+|+.+.
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~--~~~~V~vie~~~~ 39 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLK--PEWDVKVFEATEW 39 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSSSC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhC--cCCCEEEEECCCc
Confidence 3479999999999999999998751 2689999999874
No 305
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.54 E-value=0.0014 Score=68.80 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=31.6
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.+||+|||||++|+++|+.|++.. ..|.+|+|+|+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~-~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSH-PETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHC-TTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CCcCEEEEEeCCC
Confidence 479999999999999999998851 0178999999875
No 306
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.54 E-value=0.005 Score=62.35 Aligned_cols=61 Identities=16% Similarity=0.280 Sum_probs=50.6
Q ss_pred eHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCC-CCCceEEEEcCCcEEEecEEEEecCCCc
Q psy9964 170 ENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQ-PLNNVKIKFESGESIECKLLLGTDGARS 231 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~-~~~~v~v~~~dG~~~~adlvVgADG~~S 231 (595)
.+..+.+.|.+.+++.|++|+++++|++++.+++ .++.+.|+..+| +++||.||.|+|.+|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 5677888999999889999999999999985100 035688888777 799999999999999
No 307
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.53 E-value=0.0013 Score=68.39 Aligned_cols=37 Identities=22% Similarity=0.359 Sum_probs=30.5
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..||+|||||++|+++|..|++. ..|.+|+|+|+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~--~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL--DPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH--CTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh--CcCCCEEEEECCCc
Confidence 46999999999999999999875 23799999999875
No 308
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.53 E-value=0.0017 Score=68.04 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=33.4
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+|++|||+|++|+++|..|++. |++|+|||+++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA----GVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCC
Confidence 468999999999999999999998 999999999873
No 309
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.52 E-value=0.0019 Score=70.89 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=33.5
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|..|++. |++|+|+|+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~----G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMES----GYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHC----CCeEEEEeCCCC
Confidence 4467999999999999999999998 999999998764
No 310
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.48 E-value=0.0022 Score=67.22 Aligned_cols=37 Identities=22% Similarity=0.414 Sum_probs=33.9
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+|++|||+|++|+++|..|++. |.+|+|||+++.
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~----~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQA----GIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC----CCcEEEEECCCC
Confidence 4579999999999999999999997 999999999864
No 311
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.45 E-value=0.0055 Score=61.02 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=57.5
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcC
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 238 (595)
+.+..+.+.|.+.+.+.+++++++++|++++.. .+..++|++.+|+++++|.||.|+|.+|..++.+.
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKL--DDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCG
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEEC--CCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCC
Confidence 567888999999998889999999999999862 33478899999999999999999999987666553
No 312
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.44 E-value=0.0024 Score=69.54 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=33.5
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~----g~~V~lie~~~~ 407 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAAR----GHQVTLFDAHSE 407 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTT----TCEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCCC
Confidence 4467999999999999999999998 999999998763
No 313
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.43 E-value=0.0028 Score=67.08 Aligned_cols=39 Identities=26% Similarity=0.758 Sum_probs=34.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
...+|+||||+|++|+++|..|++. +|.+|+|||+++..
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~---~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSED---PAVSVALVEAGPDD 49 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTS---TTSCEEEECSSCCC
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhC---CCCCEEEEecCCcC
Confidence 3579999999999999999999986 27999999998643
No 314
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.42 E-value=0.0021 Score=65.27 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.0
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~~ 548 (595)
.+|+|||||++|+++|..|++. |. +|+|+|+.+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~----g~~~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA----KYPGRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT----TCCSCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh----CcCCCEEEEeCCCC
Confidence 4899999999999999999998 77 8999999773
No 315
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.40 E-value=0.0072 Score=57.98 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=50.8
Q ss_pred eHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCce-EEEEc---------CC-----cEEEecEEEEecCCCchh
Q psy9964 170 ENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNNV-KIKFE---------SG-----ESIECKLLLGTDGARSQV 233 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~---------dG-----~~~~adlvVgADG~~S~v 233 (595)
++..+...|.+.+.+ .|++++++++|+++.. +++.+ .|.+. +| .++++|.||.|+|.+|.+
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~---~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIV---KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEE---ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEe---cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 678888899998876 7999999999999986 23332 33332 33 479999999999999998
Q ss_pred hhhc
Q psy9964 234 RNAM 237 (595)
Q Consensus 234 R~~l 237 (595)
+...
T Consensus 194 ~~~~ 197 (284)
T 1rp0_A 194 GATG 197 (284)
T ss_dssp TTHH
T ss_pred HHHH
Confidence 8664
No 316
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.36 E-value=0.0071 Score=60.48 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=53.0
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..++...+.+.|.+.+.+.|++++++++|++++. +++++.|+..+|+ ++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRH---DDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEE---cCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 4566778889999999889999999999999986 3456888888875 999999999999874
No 317
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.33 E-value=0.0021 Score=65.45 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=31.8
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|..|++. |. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~----g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA----GYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH----TCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc----CCCCeEEEEECCCC
Confidence 457999999999999999999997 76 5999998763
No 318
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.33 E-value=0.0024 Score=72.32 Aligned_cols=36 Identities=19% Similarity=0.406 Sum_probs=33.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..+||+||||||+|+++|+.|++. |.+|+|+|+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~----G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS----GARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC----CCcEEEEeCCCC
Confidence 468999999999999999999998 999999998763
No 319
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.31 E-value=0.0024 Score=66.02 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=31.6
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.||+|||||++|+++|..|++.. .|.+|+|+|+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~--~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY--PQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--SSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCC
Confidence 59999999999999999999751 3789999999874
No 320
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.31 E-value=0.08 Score=54.75 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcC--------CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc
Q psy9964 173 LIIDAVTKKLNTL--------NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARS 231 (595)
Q Consensus 173 ~L~~~L~~~~~~~--------gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 231 (595)
.|.+.|.+.+.+. +++|+++++|++|+. .+++++|++.+|++++||.||.|.+...
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~---~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY---SPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE---CSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEE---cCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 4556666665433 678999999999986 4667999999999999999999999753
No 321
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.31 E-value=0.003 Score=68.58 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=33.4
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~----g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC----CCeEEEEecCCC
Confidence 3457999999999999999999998 999999998763
No 322
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.30 E-value=0.002 Score=66.24 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.5
Q ss_pred ecEEEECCChHHHHHHHHHhc---CCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQ---NPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~---~~~~~~~~v~~~e~~~~ 548 (595)
.||+|||||++|+++|..|++ . |.+|+|+|+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~----g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS----GHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG----GSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC----cCEEEEEeCCCC
Confidence 589999999999999999998 6 899999999874
No 323
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.24 E-value=0.094 Score=53.28 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEcCCcEEEecEEEEecCCCchhhhhc
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFESGESIECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l 237 (595)
..|.+.|.+.+++.|++|+++++|++++. +++.++ |+. +|++++||.||-|-|.+...+ .+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~-ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILI---ENGKAAGIIA-DDRIHDADLVISNLGHAATAV-LC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---ETTEEEEEEE-TTEEEECSEEEECSCHHHHHH-HT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEE---ECCEEEEEEE-CCEEEECCEEEECCCHHHHHH-hc
Confidence 45888899999889999999999999986 345555 665 588899999999999876654 44
No 324
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.21 E-value=0.0021 Score=67.20 Aligned_cols=36 Identities=33% Similarity=0.384 Sum_probs=31.7
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+||+|||||++|+++|+.|++. .+|+|+|+.+.
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-----~~V~vie~~~~ 141 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-----LTVALIEERGW 141 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-----CCEEEECTTSS
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-----CCEEEEeCCCC
Confidence 3468999999999999999999885 68999998774
No 325
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.20 E-value=0.0031 Score=64.20 Aligned_cols=34 Identities=32% Similarity=0.430 Sum_probs=30.6
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCce--EEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLS--ILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~--v~~~e~~~~ 548 (595)
.+|+|||||++|+++|..|++. |.+ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~----g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE----GFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc----CcCCeEEEEECCCC
Confidence 3899999999999999999998 765 999998774
No 326
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.20 E-value=0.0029 Score=65.37 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=31.4
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+||+|||||++|+++|..|++. ..|.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~--~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD--HPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhh--CcCCcEEEEECCCC
Confidence 5899999999999999999875 13899999998763
No 327
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.19 E-value=0.0034 Score=65.33 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=31.3
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+||+|||||++|+++|..|++.. .|.+|+|+|+.+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~ 72 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND--ENANVVTLEKGEI 72 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC--TTCEEEEECSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC--cCCcEEEEECCCC
Confidence 59999999999999999998841 2799999998764
No 328
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.18 E-value=0.0039 Score=69.02 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=33.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...+|+|||||++|+++|+.|++. |++|+|+|+.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~----g~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF----GMDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC----CCcEEEEEecCc
Confidence 457999999999999999999998 999999998763
No 329
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.17 E-value=0.004 Score=62.70 Aligned_cols=37 Identities=30% Similarity=0.233 Sum_probs=32.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.+.+.|+|||||++|+++|..|+.. +.+|+|+|+.+.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~----~~~itlie~~~~ 43 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGK----CDDITMINSEKY 43 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTT----CSCEEEECSSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCC----CCEEEEEECCCC
Confidence 4567999999999999999999655 899999998874
No 330
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.15 E-value=0.0036 Score=65.36 Aligned_cols=39 Identities=21% Similarity=0.373 Sum_probs=32.6
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+..+||+|||||++|+++|..|++.. .|.+|+|+|+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~--~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARD--PGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHS--TTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcC--CCCeEEEEeCCCC
Confidence 45789999999999999998887641 2789999998763
No 331
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.14 E-value=0.0031 Score=65.08 Aligned_cols=35 Identities=14% Similarity=0.159 Sum_probs=31.8
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCC--ceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKD--LSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~--~~v~~~e~~~~ 548 (595)
.+||+|||||++|+.+|..|++. | .+|+|+|+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~----g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH----HSRAHVDIYEKQLV 42 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CSSCEEEEECSSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc----CCCCCEEEEeCCCc
Confidence 46999999999999999999987 6 99999998763
No 332
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.10 E-value=0.0036 Score=67.04 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=33.2
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+...+|+|||||++|+++|..|++. ..|.+|+|+|+.+.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~--~~g~~V~vie~~~~ 72 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRL--SEEDEIIMVERGEY 72 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH--CSSSEEEEECSSSC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhh--CcCCCEEEEECCCC
Confidence 4456999999999999999999875 13789999999874
No 333
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.09 E-value=0.012 Score=61.92 Aligned_cols=66 Identities=12% Similarity=0.218 Sum_probs=56.0
Q ss_pred eeeHHHHHHHHHHHHhcCCc--eEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNTLNI--DIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv--~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
...+.++.+.|.+.+.+.|+ .++++++|++++.. ++...++|++++|+++++|.||.|+|..|.-+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~-~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYL-DDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEE-TTTTEEEEEETTSCEEEEEEEEECCCSCCSBC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEe-CCCCEEEEEEcCCCEEEeCEEEECCcccccCC
Confidence 46788999999999988887 89999999999873 23357899999999999999999999987543
No 334
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.97 E-value=0.014 Score=57.27 Aligned_cols=67 Identities=10% Similarity=0.133 Sum_probs=56.1
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhhhcC
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 238 (595)
+.+.++.+.|.+.+.+.+++++++++|++++. .++.++|+..+|+++++|.||.|+|.+|...+...
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~---~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLER---EGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIG 128 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEE---CCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCC
Confidence 56778888898888888899999999999986 33478888889989999999999999986666553
No 335
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.96 E-value=0.0052 Score=63.37 Aligned_cols=40 Identities=23% Similarity=0.318 Sum_probs=32.1
Q ss_pred ceecEEEECCChHHHHHHHHHhc-CC--CCCCceEEEecCCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQ-NP--TLKDLSILMIESGPE 548 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~-~~--~~~~~~v~~~e~~~~ 548 (595)
..+||+|||||++|+++|..|++ .. ...|.+|+|+|+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 46799999999999999999987 40 001689999998763
No 336
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=95.93 E-value=0.012 Score=62.57 Aligned_cols=68 Identities=19% Similarity=0.153 Sum_probs=57.0
Q ss_pred eeeeHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCchhhhhcC
Q psy9964 167 YIVENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S~vR~~l~ 238 (595)
..++|..+.+.|.+.+++ .|++| ++.+|+++.. +++. +.|.+.+|.+++||.||.|+|.+|..+...|
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~---e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIV---ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEE---SSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEECC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEe---cCCEEEEEEECCCCEEECCEEEEcCCCCccCccccC
Confidence 468899999999999988 79999 6789999985 2344 4788889989999999999999998876654
No 337
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.91 E-value=0.011 Score=58.55 Aligned_cols=61 Identities=3% Similarity=0.080 Sum_probs=53.2
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceE-EEEcCCcEEEecEEEEecCCCch
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVK-IKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+|..+.+.|.+.+++.|++++++++|++++. .++.+. |++.+| ++++|.||.|+|.+|.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~---~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSH---FGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEE---ETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE---CCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 356888999999999889999999999999986 456777 888888 8999999999999874
No 338
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.89 E-value=0.57 Score=43.69 Aligned_cols=37 Identities=14% Similarity=-0.040 Sum_probs=32.4
Q ss_pred cCCCEEEEccccccccCccchhhhhchHHHHHHHHHHHHhhhC
Q psy9964 376 IGPGCALLGDSAHRIHPLAGQGVNLGFGDIACLVQLSAESVSN 418 (595)
Q Consensus 376 ~~grvvLvGDAAH~~~P~~GqG~n~Al~Da~~La~~L~~~~~~ 418 (595)
..+||+|+|||++ |.|++.|+.||..+|+.|.+.++.
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 4789999999964 789999999999999999887653
No 339
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.86 E-value=0.0072 Score=64.21 Aligned_cols=37 Identities=22% Similarity=0.435 Sum_probs=34.2
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCc
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEK 549 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~ 549 (595)
+.|||+|||.|+.|..+|..|++. |.+|+++|+++..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~----g~~vl~id~~~~~ 43 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRS----GQRVLHVDSRSYY 43 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT----TCCEEEECSSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCCcc
Confidence 379999999999999999999999 9999999998743
No 340
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.85 E-value=0.0052 Score=70.08 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=32.0
Q ss_pred ceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 509 KQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 509 ~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
..+||+|||||++|+++|..|++. |. +|+|+|+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~----G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL----GYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT----TCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc----CCCcEEEEeCCC
Confidence 357999999999999999999998 98 799999875
No 341
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.83 E-value=0.005 Score=66.30 Aligned_cols=34 Identities=24% Similarity=0.522 Sum_probs=31.6
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCC--------ceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKD--------LSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~--------~~v~~~e~~~ 547 (595)
..+|+|||||++|+++|+.|++. | .+|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~----g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL----AATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHc----CcccccCCCceEEEEeccC
Confidence 56899999999999999999987 7 9999999987
No 342
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.82 E-value=0.011 Score=60.73 Aligned_cols=65 Identities=11% Similarity=-0.044 Sum_probs=54.2
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC---Cc---EEEecEEEEecCCCchhh
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES---GE---SIECKLLLGTDGARSQVR 234 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d---G~---~~~adlvVgADG~~S~vR 234 (595)
...+|..+.+.|.+.+.+.+..|+++++|++++. .++.++|++.+ |+ ++++|.||.|+|.+|.-+
T Consensus 110 ~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~---~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 110 QFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEK---KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp SSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEE---ETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred CCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEe---CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 3467889999999998877788999999999985 45668888876 77 899999999999988643
No 343
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.79 E-value=0.0064 Score=62.64 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=31.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.||+|||||++|+++|..|++.. .|.+|+|+|+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~--~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLH--PDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC--TTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhC--cCCeEEEEECCCc
Confidence 38999999999999999998741 3799999998764
No 344
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.79 E-value=0.012 Score=62.61 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=53.3
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc---eEEEEcCCc--EEEecEEEEecCCCchhhhhc
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN---VKIKFESGE--SIECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~---v~v~~~dG~--~~~adlvVgADG~~S~vR~~l 237 (595)
+....+.+.|.+.+.+.|++|+++++|+++..+ +++. |.+...+|+ +++||.||.|+|..|..|+.+
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 456789999999998899999999999999862 2133 334434776 789999999999999887655
No 345
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.74 E-value=0.0071 Score=63.14 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=33.1
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
....+.|||||||++|+++|..|++. +.+|+|||+.+.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~----~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTK----KYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTT----TCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhC----CCcEEEECCCCC
Confidence 34456899999999999999999887 899999998863
No 346
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=95.67 E-value=0.23 Score=51.22 Aligned_cols=56 Identities=14% Similarity=0.237 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCch
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.|-+.|.+.+.+.|++|+++++|++|+. .+++ +.|+. +|.+++||.||-|-+....
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~---~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSL---QAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEE---CGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEE---cCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 5778888888878999999999999986 3444 77766 5667999999999876543
No 347
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=95.55 E-value=0.74 Score=48.04 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 174 IIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 174 L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
|-+.|.+.+ |++|+++++|++|+. ++++++|++.||++++||.||.|-+.+..
T Consensus 217 l~~~l~~~l---g~~i~~~~~V~~i~~---~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 217 VSERIMDLL---GDRVKLERPVIYIDQ---TRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHH---GGGEESSCCEEEEEC---SSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHc---CCcEEcCCeeEEEEE---CCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 444444443 678999999999986 45678999999999999999999998763
No 348
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.54 E-value=0.024 Score=59.87 Aligned_cols=66 Identities=14% Similarity=0.227 Sum_probs=52.9
Q ss_pred eeeHHHHHHHHHHHHhcC--CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNTL--NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~--gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
...+.++.+.|.+.+.+. +..++++++|++++.+ ++...++|++++|++++||.||.|+|.+|.-+
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~-~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFD-EATNTWTVDTNHGDRIRARYLIMASGQLSVPQ 157 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEE-TTTTEEEEEETTCCEEEEEEEEECCCSCCCCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEc-CCCCeEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 356788888888877664 4679999999999863 22356889999999999999999999988543
No 349
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.51 E-value=0.0081 Score=63.95 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
+|+|||||++|+++|..|++.. .+.+|+|+|+.+.
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~--~~~~V~lie~~~~ 37 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLS--ETAEIIMFERGEY 37 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC--SSSEEEEECSSSC
T ss_pred cEEEECCCHHHHHHHHHHHhhC--cCCCEEEEECCCC
Confidence 7999999999999999998751 3689999999874
No 350
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.49 E-value=0.03 Score=54.15 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=53.2
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+..+.+.|.+.+.+.|++++++++|++++...++++.+.|++++|+++++|.||.|+|.++..
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 46778888898888888999999999999985211234688899999999999999999987643
No 351
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.49 E-value=0.02 Score=55.53 Aligned_cols=63 Identities=13% Similarity=0.126 Sum_probs=53.7
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
.+++..+.+.|.+.+.+.|+++++ .+|++++. .++.++|++.+|+++++|.||.|+|.+|.+.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~---~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSK---KDSHFVILAEDGKTFEAKSVIIATGGSPKRT 117 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEE---cCCEEEEEEcCCCEEECCEEEECCCCCCCCC
Confidence 578889999999999888999988 79999986 3456788889999999999999999877543
No 352
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.48 E-value=0.0068 Score=62.18 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=29.7
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCC--ceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKD--LSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~--~~v~~~e~~~~ 548 (595)
+.|+|||||++|+++|..|++. | .+|+|+|+.+.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~ 36 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRD 36 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCC
Confidence 4699999999999999999987 5 68999998763
No 353
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.43 E-value=0.023 Score=57.10 Aligned_cols=59 Identities=20% Similarity=0.319 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|++++++++|++++. +++++.|++.||+++++|.||.|.|..+..
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKK---AGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEE---ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEe---cCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 45778888888889999999999999985 345788999999999999999999988764
No 354
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.42 E-value=0.0094 Score=60.36 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|||||++|+++|..|++.. .+.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~--~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLAD--PSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC--TTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhcC--cCCeEEEEeCCCC
Confidence 5999999999999999998751 2579999998774
No 355
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.37 E-value=0.02 Score=56.21 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=51.5
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
.+.+..+.+.|.+.+.+.|+++++++ |++++. ..+.++|++ +|+++++|.||.|+|.+|..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~---~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDF---SSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEEC---SSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEE---cCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 46788899999998888999999987 999985 455678887 88899999999999998754
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.30 E-value=0.0036 Score=65.42 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCceecEEEECCChHHHHHHHHHhcC----------CCCCCceEEEecCCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQN----------PTLKDLSILMIESGPE 548 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~----------~~~~~~~v~~~e~~~~ 548 (595)
....+||||||+||+||++|++|.+. ....+..++.+|+.+.
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~ 87 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQ 87 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSS
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCC
Confidence 34568999999999999999999753 0112467788898764
No 357
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=95.29 E-value=0.017 Score=56.41 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=49.6
Q ss_pred eHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCC--------------CC-----ceEEEE----c--------CCcE
Q psy9964 170 ENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQP--------------LN-----NVKIKF----E--------SGES 217 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~--------------~~-----~v~v~~----~--------dG~~ 217 (595)
+..++.+.|.+.+.+ .|++++++++++++...++. .+ +|.+.+ . ++.+
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~ 237 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNT 237 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEE
T ss_pred cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceE
Confidence 467888999999988 79999999999999863100 01 222322 1 2347
Q ss_pred EEecEEEEecCCCchhhhhc
Q psy9964 218 IECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 218 ~~adlvVgADG~~S~vR~~l 237 (595)
++|++||.|+|..|++++.+
T Consensus 238 i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 238 INAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EECSEEEECCCSSSSSSCHH
T ss_pred EEcCEEEECCCCCchhhHHH
Confidence 99999999999999976655
No 358
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=95.28 E-value=0.032 Score=59.11 Aligned_cols=67 Identities=16% Similarity=0.095 Sum_probs=56.1
Q ss_pred eeeeHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCce-EEEEcCCcEEEecEEEEecCCCchhhhhc
Q psy9964 167 YIVENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNNV-KIKFESGESIECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~vR~~l 237 (595)
..++|..+.+.|.+.+++ .|++| ++.+|+++.. +++.| .|.+.+|++++||.||.|+|.+|..+...
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~---e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~~ 186 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYI-KQEEVVDIIV---KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYI 186 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEE---SSSBEEEEEETTSCEEECSEEEECCTTCBTCEEEE
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEe---cCCEEEEEEECCCcEEEeCEEEEccCCCccCceec
Confidence 467899999999999988 79999 6789999985 33444 58889999999999999999998877654
No 359
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.23 E-value=0.011 Score=60.44 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|||||++|+++|..|++. ..+.+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~--~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNL--MPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHH--CTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhcc--CcCCeEEEEcCCCC
Confidence 699999999999999999875 12589999998774
No 360
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.21 E-value=0.03 Score=59.04 Aligned_cols=65 Identities=14% Similarity=0.278 Sum_probs=54.7
Q ss_pred eeeHHHHHHHHHHHHhcCCc--eEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 168 IVENDLIIDAVTKKLNTLNI--DIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv--~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
...+.++.+.|.+.+.+.++ .++++++|++++.+ ++...++|++++|+++++|.||.|+|..|.-
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~-~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLD-EEGLRWTVRTDRGDEVSARFLVVAAGPLSNA 161 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEE-TTTTEEEEEETTCCEEEEEEEEECCCSEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEc-CCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 45788899999998888777 89999999999863 2345789999999999999999999987643
No 361
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.21 E-value=0.038 Score=58.70 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=55.1
Q ss_pred ceeeeHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCceE-EEEcCCcEEEecEEEEecCCCchhhhh
Q psy9964 166 SYIVENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNNVK-IKFESGESIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 166 ~~~i~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~ 236 (595)
...++|..+.+.|.+.+++ +|++|. +.+|+++.. +++.|. |.+.+|++++||.||.|+|.+|..+-.
T Consensus 111 r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~---d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~i~ 179 (641)
T 3cp8_A 111 RAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSA---NSGKFSSVTVRSGRAIQAKAAILACGTFLNGLIH 179 (641)
T ss_dssp EEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE---ETTEEEEEEETTSCEEEEEEEEECCTTCBTCEEE
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEe---cCCEEEEEEECCCcEEEeCEEEECcCCCCCccce
Confidence 3578999999999999987 699985 559999875 345565 888999999999999999999875543
No 362
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.00 E-value=0.035 Score=58.99 Aligned_cols=65 Identities=9% Similarity=0.062 Sum_probs=50.6
Q ss_pred eHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEEc--CCc--EEEecEEEEecCCCchhhhh
Q psy9964 170 ENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKFE--SGE--SIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~--dG~--~~~adlvVgADG~~S~vR~~ 236 (595)
....+.+.|.+.+.+.|++|+++++|+++..+ +++.| .|++. +|+ ++++|.||.|+|.+|..++.
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~ 322 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD--DKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNER 322 (571)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--TTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc--CCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHH
Confidence 35678999999998899999999999999862 21332 24443 676 78999999999999975543
No 363
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.99 E-value=0.56 Score=51.37 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=37.2
Q ss_pred CCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCC
Q psy9964 185 LNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGA 229 (595)
Q Consensus 185 ~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~ 229 (595)
.|++|+++++|++|+. ++++|+|++.+|++++||.||.|-..
T Consensus 542 ~gl~I~l~t~V~~I~~---~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDY---SGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEEC---SSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEE---cCCEEEEEECCCcEEEcCEEEECCCH
Confidence 4789999999999996 56679999999999999999999854
No 364
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.95 E-value=0.026 Score=58.17 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|++++++++|++++. +++++.+++.||+++.+|.||.|.|.++.+
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVP---EAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE---ETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEE---eCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 56777888888888999999999999985 345688888899999999999999987764
No 365
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.92 E-value=0.17 Score=53.61 Aligned_cols=69 Identities=22% Similarity=0.194 Sum_probs=51.6
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc---CCc--EEEecEEEEecCCCc-hhhhhcCC
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE---SGE--SIECKLLLGTDGARS-QVRNAMNV 239 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~---dG~--~~~adlvVgADG~~S-~vR~~l~~ 239 (595)
+.-..+...|.+.+.+.|++|+++++|++++.+ ++..+.|++. +|+ +++||.||-|.|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 455677888888888899999999999999862 2222345553 344 799999999999998 56665554
No 366
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.78 E-value=0.034 Score=58.64 Aligned_cols=66 Identities=12% Similarity=0.324 Sum_probs=53.3
Q ss_pred eeeHHHHHHHHHHHHhcCCc--eEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNTLNI--DIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv--~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
...+.++.+.|.+.+.+.++ .++++++|++++.+ ++...++|++++|+++++|.||.|+|..|.-+
T Consensus 83 ~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~-~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 83 FASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYV-ENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEE-GGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred CCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEe-CCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 35788888888888877666 79999999999863 23457899999999999999999999877543
No 367
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=94.67 E-value=0.2 Score=51.75 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=41.1
Q ss_pred HHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 174 IIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 174 L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
|.+.|.+.+.+ ++|+++++|++|+. .+++++|++.+| +++||.||-|=+....
T Consensus 238 l~~~l~~~l~~--~~i~~~~~V~~i~~---~~~~~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 238 LIERLEEVLER--SEIRLETPLLAISR---EDGRYRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHCSS--CEEESSCCCCEEEE---ETTEEEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHhhccC--CEEEcCCeeeEEEE---eCCEEEEEECCC-eEECCEEEECCCHHHH
Confidence 44455554432 68999999999986 456799999999 7999999999876543
No 368
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=94.58 E-value=0.16 Score=52.39 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEE---cCCcEEEecEEEEecCCCch
Q psy9964 174 IIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKF---ESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 174 L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~---~dG~~~~adlvVgADG~~S~ 232 (595)
|.+.|.+.+ |++|+++++|++|+. .++++.|++ .+|++++||.||-|-+....
T Consensus 240 l~~~l~~~l---g~~i~~~~~V~~i~~---~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 240 LIDALAASL---GDAAHVGARVEGLAR---EDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHH---GGGEESSEEEEEEEC---C--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHh---hhhEEcCCEEEEEEe---cCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 445555554 568999999999996 445689998 78889999999999987754
No 369
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.50 E-value=0.049 Score=55.99 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
.+.+.|.+.+++.|++++++++|++++.. ++..+.|++.||+++.+|+||.|.|..+.+
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 46777888888889999999999999852 223478999999999999999999987654
No 370
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.39 E-value=0.05 Score=60.70 Aligned_cols=69 Identities=10% Similarity=0.138 Sum_probs=55.9
Q ss_pred eeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEEcCCcEEEecEEEEecCCCchh-hhhcCC
Q psy9964 167 YIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKFESGESIECKLLLGTDGARSQV-RNAMNV 239 (595)
Q Consensus 167 ~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~v-R~~l~~ 239 (595)
..++...+.+.|.+.+.+.|++|+++++|++++. +++.+ .|++.+| +++||.||.|+|.+|.. .+.++.
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~---~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~ 216 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQ---SGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGM 216 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---ETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTC
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEE---eCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCC
Confidence 4568888999999999999999999999999986 33444 5777777 79999999999999854 344444
No 371
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.33 E-value=0.083 Score=55.38 Aligned_cols=64 Identities=13% Similarity=0.235 Sum_probs=53.5
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+..+.+.|.+.+.+.|++++.+++|++++...++++.++|++++|+++++|.||.|+|.++.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 5678899999999988999999999999997521123468899999999999999999998754
No 372
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.26 E-value=0.055 Score=56.20 Aligned_cols=59 Identities=14% Similarity=0.222 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|++++++++|++++. +++++.|++.+|+++.+|.||-|.|..+..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQS---TENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE---CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEe---eCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 35677788888888999999999999985 456789999999999999999999976543
No 373
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.21 E-value=0.065 Score=56.88 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=50.5
Q ss_pred eHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCC-CC--ceEEEEcCCc--EEEecEEEEecCCCchhhhhc
Q psy9964 170 ENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQP-LN--NVKIKFESGE--SIECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~-~~--~v~v~~~dG~--~~~adlvVgADG~~S~vR~~l 237 (595)
....+.+.|.+.+.+.|++|+++++|+++..+ + +. +|.+...+|+ +++||.||.|+|..|..++.+
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 45678899999998899999999999999752 2 22 2333333675 689999999999999765443
No 374
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.18 E-value=1.4 Score=45.37 Aligned_cols=52 Identities=21% Similarity=0.311 Sum_probs=41.2
Q ss_pred HHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCC---cEEEecEEEEecCCC
Q psy9964 174 IIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESG---ESIECKLLLGTDGAR 230 (595)
Q Consensus 174 L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG---~~~~adlvVgADG~~ 230 (595)
|-+.|.+.+.+ .+|+++++|++|+. .+++|+|++.+| ++++||.||.|-..+
T Consensus 241 l~~~l~~~l~~--~~i~~~~~V~~i~~---~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 241 IYYAFQDRIGT--DNIVFGAEVTSMKN---VSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHCG--GGEETTCEEEEEEE---ETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHhcCC--CeEEECCEEEEEEE---cCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 55555555532 67999999999986 466899999887 689999999998765
No 375
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.03 E-value=0.051 Score=45.62 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=31.6
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.-.|+|+|+|.+|..+|-.|.+. |.+|+++|+.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS----DIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC----CCCEEEEECCHH
Confidence 34799999999999999999998 999999998764
No 376
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.01 E-value=0.11 Score=50.49 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=53.8
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhhh
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVRN 235 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~ 235 (595)
+.+.++.+.|.+.+.+.+++++++++|++++.. .++.+.|++.+|+ +++|.||.|.|.+|...+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQ--ADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEEC--TTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEEC--CCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 567889999999998889999999999999862 3347889998887 999999999999764433
No 377
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.93 E-value=0.072 Score=54.95 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc-EEEecEEEEecCCCchh
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE-SIECKLLLGTDGARSQV 233 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~-~~~adlvVgADG~~S~v 233 (595)
++.+.|.+.+++.|++++++++|++++. +++++.|++.||+ ++.+|+||-|.|..+.+
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALER---DAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEE---ETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 4667778888889999999999999985 3445889999999 89999999999987654
No 378
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.90 E-value=0.071 Score=54.99 Aligned_cols=66 Identities=14% Similarity=0.219 Sum_probs=52.2
Q ss_pred eeeHHHHHHHHHHHHhcCCce--EEeCCeEeEEecCCCCCCceEEEEcC---C--cEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNTLNID--IVYQKKVAHYELPEQPLNNVKIKFES---G--ESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~--i~~~~~v~~v~~~~~~~~~v~v~~~d---G--~~~~adlvVgADG~~S~vR 234 (595)
.+++..+.+.|.+.+.+.|++ |+++++|++++.. ++...++|++.+ | .++++|.||.|+|.+|.-+
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~-~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFN-EDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEc-CCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 467889999999988877887 9999999999863 122367777765 4 4789999999999877654
No 379
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.83 E-value=0.098 Score=50.92 Aligned_cols=63 Identities=6% Similarity=0.025 Sum_probs=50.5
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCch
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.+.+..+.+.|.+.+.+.|+++++ .+|++++.. +.++. ++|...+|+++++|.||.|+|.++.
T Consensus 61 ~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~-~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 61 PIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHD-ATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEEC-TTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEec-cCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 357788999999999889999988 589999851 00233 7888889999999999999998764
No 380
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.77 E-value=0.071 Score=53.46 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|||||.+|+.+|..|++. |.+|+++|+.+.
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~----g~~Vtvv~~~~~ 180 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS----GTPASIGIILEY 180 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH----TCCEEEECSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCc
Confidence 799999999999999999998 999999998874
No 381
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=93.76 E-value=1.6 Score=44.50 Aligned_cols=55 Identities=7% Similarity=0.003 Sum_probs=40.6
Q ss_pred HHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCchhhhh
Q psy9964 174 IIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 174 L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S~vR~~ 236 (595)
|-+.|.+.+ |++|+++++|++|+. .+++ ++|+. +|++++||.||-|=+.. .+++.
T Consensus 217 l~~~l~~~l---g~~i~~~~~V~~i~~---~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l 272 (453)
T 2yg5_A 217 VSIRMAEAL---GDDVFLNAPVRTVKW---NESGATVLAD-GDIRVEASRVILAVPPN-LYSRI 272 (453)
T ss_dssp HHHHHHHHH---GGGEECSCCEEEEEE---ETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGS
T ss_pred HHHHHHHhc---CCcEEcCCceEEEEE---eCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcC
Confidence 444444443 578999999999986 3456 88776 77889999999999876 34443
No 382
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.75 E-value=0.47 Score=46.87 Aligned_cols=51 Identities=14% Similarity=0.202 Sum_probs=43.7
Q ss_pred ceeeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 166 SYIVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 166 ~~~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
+..++...+.+.|.+.+.+.|++|+. ++|++++. . .+ +||.||.|+|.+|.
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~---~-----------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQ---A-----------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGG---T-----------CS-SCSEEEECCGGGGG
T ss_pred cceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhh---c-----------Cc-CCCEEEECCCcchh
Confidence 46788999999999999999999998 99999874 2 12 89999999999984
No 383
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.66 E-value=0.079 Score=54.65 Aligned_cols=60 Identities=17% Similarity=0.290 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc-C--Cc--EEEecEEEEecCCCchhh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE-S--GE--SIECKLLLGTDGARSQVR 234 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~-d--G~--~~~adlvVgADG~~S~vR 234 (595)
.++.+.|.+.+++.|++++++++|++++. +++.+.|++. + |+ ++.+|+||.|.|..+.+.
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEK---KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEE---eCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 45777888888889999999999999985 3456788887 7 87 899999999999876653
No 384
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.57 E-value=0.086 Score=54.07 Aligned_cols=57 Identities=19% Similarity=0.180 Sum_probs=40.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.+|+|||||++|+.+|..|++. |.+|+++|+.+.... ..++ ..+...-.+.|++.|+
T Consensus 150 ~~vvIiG~G~~g~e~A~~l~~~----g~~Vtlv~~~~~~l~-----~~~~---~~~~~~l~~~l~~~gv 206 (447)
T 1nhp_A 150 NNVVVIGSGYIGIEAAEAFAKA----GKKVTVIDILDRPLG-----VYLD---KEFTDVLTEEMEANNI 206 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTTT-----TTCC---HHHHHHHHHHHHTTTE
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CCeEEEEecCccccc-----ccCC---HHHHHHHHHHHHhCCC
Confidence 4899999999999999999998 999999998764221 0111 1234445566666664
No 385
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.53 E-value=0.12 Score=50.50 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=50.3
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEE-EEcCCcEEEecEEEEecCCCch
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKI-KFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v-~~~dG~~~~adlvVgADG~~S~ 232 (595)
.+.+..+.+.|.+.+.+.|+++++++ +++++. .+.++| .+++|+++++|.||.|+|.++.
T Consensus 67 ~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~----~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 67 GITGPELMDEMREQALRFGADLRMED-VESVSL----HGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC----SSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe----CCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 46778888889888888899999987 999984 345677 7888989999999999998764
No 386
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.48 E-value=0.11 Score=53.56 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+.+.|.+.+++.|++++++++|++++. +++.++|++.||+++.+|.||-|-|..+.
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG---ENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc---cCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 45778888888889999999999999985 45678899999999999999999998643
No 387
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.46 E-value=0.11 Score=54.19 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
++.+.|.+.+++.|++++++++|++++. +++++.|++.+|+++++|.||-|-|..+.+
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~---~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTR---TGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEE---CSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 5677888888889999999999999985 345688888999999999999999987654
No 388
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.45 E-value=0.067 Score=45.75 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=31.3
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...|+|+|+|.+|..+|..|.+. |.+|+++|+.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~----g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS----GHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 34799999999999999999998 999999998764
No 389
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.37 E-value=0.11 Score=55.29 Aligned_cols=64 Identities=9% Similarity=0.045 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhcCC-ceEEeCCeEeEEecCCCCCC--ceEEE-EcCCc--EEEecEEEEecCCCchhhhhc
Q psy9964 172 DLIIDAVTKKLNTLN-IDIVYQKKVAHYELPEQPLN--NVKIK-FESGE--SIECKLLLGTDGARSQVRNAM 237 (595)
Q Consensus 172 ~~L~~~L~~~~~~~g-v~i~~~~~v~~v~~~~~~~~--~v~v~-~~dG~--~~~adlvVgADG~~S~vR~~l 237 (595)
..+.+.|.+.+.+.| ++|+++++|+++..+ ++. +|.+. ..+|+ +++|+.||.|+|..|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 578899999998877 999999999999862 222 23333 26787 799999999999999997655
No 390
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.36 E-value=0.13 Score=53.54 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|++++++++|++++.. +++.+.|++.||+++.+|.||-|-|....
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 356777888888899999999999999852 22358899999999999999999997644
No 391
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.31 E-value=0.14 Score=53.36 Aligned_cols=59 Identities=24% Similarity=0.371 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
++.+.|.+.+++.|++++++++|++++.. +++.+.|++.||+++.+|+||-|-|....+
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 56677888888899999999999999851 223588999999999999999999976543
No 392
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.31 E-value=0.066 Score=44.64 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=30.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|+|+|+|.+|..+|..|.+. |.+|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~----g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK----GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 4699999999999999999998 99999999865
No 393
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.22 E-value=0.14 Score=49.57 Aligned_cols=60 Identities=12% Similarity=0.344 Sum_probs=49.7
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.+.+..+.+.|.+.+.+.++++++++ +++++. ..+.++| ..+|+++++|.||.|+|.++.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~---~~~~~~v-~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 58 DLTGPLLMERMHEHATKFETEIIFDH-INKVDL---QNRPFRL-NGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECCC-EEEEEC---SSSSEEE-EESSCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEe---cCCEEEE-EeCCCEEEcCEEEECCCCCcC
Confidence 35677888888888888899999986 999985 4566777 778889999999999998764
No 394
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.21 E-value=0.18 Score=49.90 Aligned_cols=60 Identities=8% Similarity=0.093 Sum_probs=50.1
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
+.+..+.+.|.+.+.+.|++++++++|++++. .++.+.|+..+| ++++|.||-|.|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISA---DDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEE---CSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEE---CCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 46677888888888778999999999999986 345788888877 5999999999999864
No 395
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.13 E-value=0.12 Score=52.20 Aligned_cols=66 Identities=14% Similarity=0.046 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh--hhhcCCC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV--RNAMNVQ 240 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v--R~~l~~~ 240 (595)
..+.+.|.+.+++.|++++++++|++++. ++....|+++||+++.+|+||-|-|..+.. -+.+++.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSG---EGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEC---SSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEec---cCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCc
Confidence 45677788888889999999999999985 334558999999999999999999986643 3444443
No 396
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.10 E-value=0.14 Score=53.27 Aligned_cols=58 Identities=12% Similarity=0.252 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+.+.+.+.+++.|++++++++|++++. +++.+.|++.||+++.+|+||-|-|....
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~---~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGV---SSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEE---ETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe---cCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 45777888888889999999999999984 34567899999999999999999997654
No 397
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.08 E-value=0.097 Score=44.60 Aligned_cols=34 Identities=12% Similarity=0.292 Sum_probs=30.7
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
...|+|+|+|.+|..+|-.|.+. |.+|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~----g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR----GQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT----TCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC----CCCEEEEECCC
Confidence 44799999999999999999998 99999999864
No 398
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.05 E-value=0.17 Score=51.21 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|++++++++|++++. +++.+ .|+++||+++.+|+||-|-|.....
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEG---DGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE---SSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEe---cCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 45777888888889999999999999985 33444 7899999999999999999987653
No 399
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.04 E-value=0.084 Score=51.09 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|||||.+|+-+|..|++. |.+|+|+|+.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF----ADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT----CSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc----CCEEEEEecccc
Confidence 699999999999999999998 999999998764
No 400
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.96 E-value=0.13 Score=51.84 Aligned_cols=66 Identities=12% Similarity=0.223 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEcCCcEEEecEEEEecCCCch--hhhhcCCC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFESGESIECKLLLGTDGARSQ--VRNAMNVQ 240 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~dG~~~~adlvVgADG~~S~--vR~~l~~~ 240 (595)
..+.+.|.+.+++.|++++++++|++++. +++. ..|+++||+++.+|+||-|-|.... +-+.+++.
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAA---EGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---ETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEe---cCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCC
Confidence 45677888888889999999999999985 2334 4689999999999999999998554 33444443
No 401
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.94 E-value=0.13 Score=54.03 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc----eEEEEcCCc-EEEecEEEEecCCCchhh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN----VKIKFESGE-SIECKLLLGTDGARSQVR 234 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~----v~v~~~dG~-~~~adlvVgADG~~S~vR 234 (595)
.++.+.|.+.+++.|++++++++|++++. .+++ +.|++.||+ ++.+|.||-|-|..+..-
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~---~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEE---DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEE---CTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEE---cCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 45677888888889999999999999985 2334 788999998 899999999999877653
No 402
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=92.91 E-value=0.2 Score=51.96 Aligned_cols=58 Identities=9% Similarity=0.024 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhcCC-ceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLN-IDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~g-v~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+.+.|.+.+.+.| ++|+++++|++|+. .+++++|++.+|++++||.||-|-|....
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~---~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVN---ERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEE---CSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEE---cCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 457788888887777 99999999999986 45679999999999999999999997644
No 403
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.88 E-value=0.11 Score=53.36 Aligned_cols=56 Identities=20% Similarity=0.391 Sum_probs=40.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
-+|+|||||++|+.+|..|++. |.+|+|+|+.+.... .++. .++..-.+.|++.|+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l~------~~~~---~~~~~l~~~l~~~gv 227 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL----GAQVSVVEARERILP------TYDS---ELTAPVAESLKKLGI 227 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH----TCEEEEECSSSSSST------TSCH---HHHHHHHHHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCCcccc------ccCH---HHHHHHHHHHHHCCC
Confidence 3799999999999999999998 999999998874321 1111 233444566667665
No 404
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.77 E-value=0.15 Score=49.47 Aligned_cols=60 Identities=8% Similarity=0.047 Sum_probs=48.4
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.+.+..+.+.|.+.+.+.|+++++ .+|++++. ..+.++|+. +|+++++|.||.|+|.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~---~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKK---TQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEE---ETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEE---eCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 456778888888888888999988 78999985 345567776 6778999999999998654
No 405
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.76 E-value=0.12 Score=51.45 Aligned_cols=54 Identities=26% Similarity=0.457 Sum_probs=40.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.|+|||||++|+.+|..|++. |.+|+++|+.+.... +++ .+.....+.|++.|+
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~-------~~~---~~~~~l~~~l~~~gV 198 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEA----GYHVKLIHRGAMFLG-------LDE---ELSNMIKDMLEETGV 198 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHT----TCEEEEECSSSCCTT-------CCH---HHHHHHHHHHHHTTE
T ss_pred cEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCCeecc-------CCH---HHHHHHHHHHHHCCC
Confidence 699999999999999999998 999999998763220 121 233445566777775
No 406
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.60 E-value=0.18 Score=50.88 Aligned_cols=56 Identities=20% Similarity=0.380 Sum_probs=41.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.|+|||||.+|+-+|..|++. |.+|+++|+.+.... ..++. .+...-.+.|++.|+
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~-----~~~~~---~~~~~l~~~l~~~GV 202 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTA----GVHVSLVETQPRLMS-----RAAPA---TLADFVARYHAAQGV 202 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSSST-----TTSCH---HHHHHHHHHHHHTTC
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCEEEEEEeCCcccc-----cccCH---HHHHHHHHHHHHcCc
Confidence 799999999999999999998 999999998764221 00111 244455667777776
No 407
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.59 E-value=0.091 Score=44.00 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|+|+|.+|..+|..|.+. |.+|+++|+.+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~----g~~V~~id~~~~ 40 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA----GKKVLAVDKSKE 40 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC----CCeEEEEECCHH
Confidence 699999999999999999998 999999998763
No 408
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=92.56 E-value=0.21 Score=48.39 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=49.2
Q ss_pred eHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCC-C-----ceEEEEc------------CCcEEEe----------
Q psy9964 170 ENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPL-N-----NVKIKFE------------SGESIEC---------- 220 (595)
Q Consensus 170 ~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~-~-----~v~v~~~------------dG~~~~a---------- 220 (595)
+...+...|++.+.+ +|++++.+++|+++..+++.+ + +|.+... |+.+++|
T Consensus 144 ~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~ 223 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRD 223 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCC
T ss_pred chHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccc
Confidence 567888999999887 699999999999998631002 2 2333221 3457999
Q ss_pred -----cEEEEecCCCchhhhhcC
Q psy9964 221 -----KLLLGTDGARSQVRNAMN 238 (595)
Q Consensus 221 -----dlvVgADG~~S~vR~~l~ 238 (595)
++||.|+|..|++.+.+.
T Consensus 224 ~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 224 LSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp SSTTCCEEEECCCCC--CCSHHH
T ss_pred ccccCCEEEECcCCCchHHHHHH
Confidence 999999999999888773
No 409
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.55 E-value=0.27 Score=51.12 Aligned_cols=60 Identities=17% Similarity=0.237 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcE-EEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGES-IECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~-~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++.. +++.+.|++.||++ +.+|+||-|-|....+
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKV--SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--STTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEc--CCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 456777888888899999999999999852 22347899999998 9999999999987665
No 410
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.44 E-value=0.19 Score=51.36 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=43.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCc
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAW 580 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~ 580 (595)
.++|+|||.+|+-+|..|++. |.+|+|+|+.+.... .++. .++....+.|++.|+-
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~ll~------~~d~---~~~~~~~~~l~~~gV~ 204 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER----GLHPTLIHRSDKINK------LMDA---DMNQPILDELDKREIP 204 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----TCEEEEEESSSCCST------TSCG---GGGHHHHHHHHHTTCC
T ss_pred EEEEECCccchhhhHHHHHhc----CCcceeeeeeccccc------cccc---hhHHHHHHHhhccceE
Confidence 699999999999999999998 999999998874321 1121 3556677788888874
No 411
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.34 E-value=0.22 Score=48.44 Aligned_cols=62 Identities=15% Similarity=0.269 Sum_probs=52.8
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc---CCcEEEecEEEEecCCCchh
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE---SGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~---dG~~~~adlvVgADG~~S~v 233 (595)
.+.+.++...|.+.+.+.|+++++++ |++++. ..+.+.++.. ++.++++|.||.|.|.++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~---~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDL---SSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEEC---SSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEE---cCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 47788999999999988999999998 999986 5667888874 77789999999999986543
No 412
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=92.31 E-value=0.22 Score=51.02 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGAR 230 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 230 (595)
..|-+.|.+.+++.|++|+++++|+++..+ +++..+.|++.+|++++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 568889999998899999999999999862 1233467889999999999999999876
No 413
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.29 E-value=0.16 Score=52.55 Aligned_cols=59 Identities=19% Similarity=0.257 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc--eEEEEcCC-cEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN--VKIKFESG-ESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~--v~v~~~dG-~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. ++++ +.|++.|| +++.+|+||-|-|..+.+
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEK---NVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEE---CC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEE---cCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 35667788888888999999999999985 2333 78999999 789999999999976654
No 414
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.11 E-value=0.26 Score=46.96 Aligned_cols=63 Identities=13% Similarity=0.153 Sum_probs=51.7
Q ss_pred eeeHHHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 168 IVENDLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
.+...++.+.|.+.+.+ .++++.. .+|++++. .++.+.|++.+|+++++|.||.|.|.++...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~---~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKG---SFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEE---ETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEE---cCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 46778889999999987 4777765 49999986 4567899999999999999999999976543
No 415
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=92.00 E-value=5.3 Score=42.90 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=37.5
Q ss_pred HHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC------CcEEEecEEEEecCC
Q psy9964 178 VTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES------GESIECKLLLGTDGA 229 (595)
Q Consensus 178 L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d------G~~~~adlvVgADG~ 229 (595)
|.+.+. .+++|+++++|++|+. .+++|+|++.+ |++++||.||.|=..
T Consensus 403 l~~~La-~~l~I~l~~~V~~I~~---~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~ 456 (662)
T 2z3y_A 403 VPVALA-EGLDIKLNTAVRQVRY---TASGCEVIAVNTRSTSQTFIYKCDAVLCTLPL 456 (662)
T ss_dssp HHHHHT-TTCEEETTEEEEEEEE---ETTEEEEEEEESSCTTCEEEEEESEEEECCCH
T ss_pred HHHHHH-hcCceecCCeEEEEEE---CCCcEEEEEeecccCCCCeEEEeCEEEECCCH
Confidence 334444 3568999999999997 46689999877 568999999998753
No 416
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.89 E-value=0.38 Score=46.35 Aligned_cols=60 Identities=10% Similarity=0.188 Sum_probs=51.5
Q ss_pred eeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 169 VENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 169 i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
+....+.+.|.+.+.+.|+++++ .+|++++. +++.+.|+..+|+++++|.||-|.|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~---~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIEN---RGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEE---C--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEe---cCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 67788999999999889999999 99999986 45678899999999999999999998743
No 417
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=91.77 E-value=0.23 Score=51.20 Aligned_cols=59 Identities=22% Similarity=0.338 Sum_probs=46.6
Q ss_pred HHHHHHHHHHH-hcCCceEEeCCeEeEEecCCCCCCceEEEEc--CC--cEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKL-NTLNIDIVYQKKVAHYELPEQPLNNVKIKFE--SG--ESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~-~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~--dG--~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+ ++.|++++++++|++++. +++++.|++. +| +++.+|.||-|-|..+.+
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTN---NGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEE---CSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEE---cCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 44677788888 779999999999999985 3456788876 77 589999999999987654
No 418
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.61 E-value=0.24 Score=50.45 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..+.+.|.+.+++.|++++++++|++++.. ..++.+ .|++.||+++.+|+||-|-|..+.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMS-TDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEC-TTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEec-cCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 346677788887889999999999999830 012344 788999999999999999997654
No 419
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=91.44 E-value=0.26 Score=51.16 Aligned_cols=56 Identities=21% Similarity=0.325 Sum_probs=40.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.|+|||||.+|+-+|..|++. |.+|+++|+.+.... ..++. .++..-.+.|++.|+
T Consensus 196 ~vvVIGgG~ig~E~A~~l~~~----g~~Vtlv~~~~~~l~-----~~~~~---~~~~~l~~~l~~~GV 251 (490)
T 2bc0_A 196 RVAVVGAGYIGVELAEAFQRK----GKEVVLIDVVDTCLA-----GYYDR---DLTDLMAKNMEEHGI 251 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSSTTT-----TTSCH---HHHHHHHHHHHTTTC
T ss_pred eEEEECCCHHHHHHHHHHHHC----CCeEEEEEcccchhh-----hHHHH---HHHHHHHHHHHhCCe
Confidence 699999999999999999998 999999998764221 01111 234445566677775
No 420
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.42 E-value=0.2 Score=51.89 Aligned_cols=55 Identities=24% Similarity=0.291 Sum_probs=40.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
+|+|||||++|+.+|..|++. |.+|+++|+.+.... .++. .+.....+.|++.|+
T Consensus 188 ~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~~l~------~~~~---~~~~~l~~~l~~~Gv 242 (480)
T 3cgb_A 188 DVTIIGGGAIGLEMAETFVEL----GKKVRMIERNDHIGT------IYDG---DMAEYIYKEADKHHI 242 (480)
T ss_dssp EEEEECCHHHHHHHHHHHHHT----TCEEEEECCGGGTTS------SSCH---HHHHHHHHHHHHTTC
T ss_pred eEEEECCCHHHHHHHHHHHhc----CCeEEEEEeCCchhh------cCCH---HHHHHHHHHHHHcCc
Confidence 799999999999999999998 999999998763221 1111 233445566777775
No 421
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.39 E-value=0.046 Score=56.10 Aligned_cols=65 Identities=23% Similarity=0.408 Sum_probs=48.6
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCcc
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAWD 581 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~~ 581 (595)
..|+|+|+|-+|..+|-.|... |.+|+|+|..+..-... ...++.+++.=++.....|++.|+-+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~----~~~v~vId~d~~~~~~~--~~~~~~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE----NNDITIVDKDGDRLREL--QDKYDLRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST----TEEEEEEESCHHHHHHH--HHHSSCEEEESCTTCHHHHHHHTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHHHHHHH--HHhcCcEEEEEcCCCHHHHHhcCCCc
Confidence 4699999999999999999988 99999999876432100 11235566556677788888888754
No 422
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.33 E-value=0.21 Score=51.39 Aligned_cols=64 Identities=9% Similarity=0.002 Sum_probs=50.3
Q ss_pred eeeHHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc--eEEEEcCCc----EEEecEEEEecCCCc
Q psy9964 168 IVENDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN--VKIKFESGE----SIECKLLLGTDGARS 231 (595)
Q Consensus 168 ~i~R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~--v~v~~~dG~----~~~adlvVgADG~~S 231 (595)
...|..+.+.|...+.+.+++++++++|++++..++.... ++|+..+|+ ++++|.||.|+|...
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 123 YPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp CCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCC
Confidence 4578899999998888778999999999999862111222 578888876 899999999999743
No 423
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.23 E-value=0.46 Score=48.62 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|++++++++|++++. .++.+.|++++| ++.+|.||-|-|....
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEE---TANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEE---CSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEc---cCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 45677888888889999999999999985 455678888777 8999999999997543
No 424
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=91.20 E-value=0.18 Score=48.61 Aligned_cols=33 Identities=12% Similarity=0.274 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|+|||.+|+-+|..|++. |.+|+|+++.+.
T Consensus 154 ~vvViGgG~ig~e~A~~l~~~----G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 154 VLMVVGGGDAAMEEALHLTKY----GSKVIILHRRDA 186 (314)
T ss_dssp EEEEECSSHHHHHHHHHHTTT----SSEEEEECSSSS
T ss_pred eEEEECCChHHHHHHHHHHHh----CCeeeeeccccc
Confidence 699999999999999999998 999999997663
No 425
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.18 E-value=0.2 Score=51.35 Aligned_cols=59 Identities=19% Similarity=0.312 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc---CCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE---SGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~---dG~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. +++++.+++. +|+++.+|+||-|.|..+.+
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEE---REDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEE---ETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE---eCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 35677788888889999999999999985 3446777776 45689999999999987543
No 426
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.05 E-value=0.21 Score=39.91 Aligned_cols=34 Identities=18% Similarity=0.464 Sum_probs=30.2
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCC-ceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKD-LSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~-~~v~~~e~~~~ 548 (595)
..|+|+|+|.+|..++..|.+. | .+|.++++.+.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~----g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS----SNYSVTVADHDLA 40 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----SSEEEEEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCHH
Confidence 3699999999999999999998 8 89999998753
No 427
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=90.92 E-value=0.21 Score=51.93 Aligned_cols=60 Identities=18% Similarity=0.296 Sum_probs=42.7
Q ss_pred cEEEECCChHHHHHHHHHhcCC----------CCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCCc
Q psy9964 512 DVVISGGGMIGTTLACAIAQNP----------TLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGAW 580 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~----------~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~~ 580 (595)
.++|||||++|.-+|..|+... ...+.+|+|+|+.+.... .++. .++....+.|++.|+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~------~~~~---~~~~~~~~~L~~~GV~ 288 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN------MFEK---KLSSYAQSHLENTSIK 288 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST------TSCH---HHHHHHHHHHHHTTCE
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc------CCCH---HHHHHHHHHHHhccee
Confidence 6999999999999998886420 001368999999885331 1222 4667788899999973
No 428
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=90.82 E-value=0.22 Score=51.54 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC----CcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES----GESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d----G~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. +++.+.|++.| |+++.+|+||-|-|....+
T Consensus 226 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~---~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 226 RDLVKVWQKQNEYRFDNIMVNTKTVAVEP---KEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHHGGGEEEEECSCEEEEEEE---ETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHHhcCCEEEECCEEEEEEE---cCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 45677888888889999999999999985 34567888887 7889999999999987654
No 429
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.75 E-value=0.33 Score=49.28 Aligned_cols=52 Identities=13% Similarity=0.184 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCC
Q psy9964 175 IDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGAR 230 (595)
Q Consensus 175 ~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 230 (595)
..++...+++.| +|+++++|++|+. ++++++|++.+|++++||.||.|-|..
T Consensus 207 ~~l~~~~~~~~g-~i~~~~~V~~i~~---~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 207 ADLVDAMSQEIP-EIRLQTVVTGIDQ---SGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHHTTCS-CEESSCCEEEEEC---SSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHHhhCC-ceEeCCEEEEEEE---cCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 444444455567 9999999999986 466799999999999999999999954
No 430
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.41 E-value=0.31 Score=50.24 Aligned_cols=59 Identities=20% Similarity=0.282 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc---CC--cEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE---SG--ESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~---dG--~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. +++++.|++. +| +++.+|+||-|-|..+.+
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDT---SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEEC---SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEE---cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 35677788888889999999999999985 3445777776 56 589999999999987543
No 431
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.34 E-value=0.55 Score=48.88 Aligned_cols=59 Identities=12% Similarity=0.215 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEEc-CCc--EEEec-EEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKFE-SGE--SIECK-LLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~~-dG~--~~~ad-lvVgADG~~S~ 232 (595)
..+.+.|.+.+++.|++|+++++|+++..+ +++. +.|... +|+ +++|| .||-|.|..|.
T Consensus 202 ~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~--~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 202 YMLMKPLVETAEKLGVRAEYDMRVQTLVTD--DTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEC--TTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHcCCEEEecCEeEEEEEC--CCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 378999999998899999999999999862 2232 234443 333 68996 99999999884
No 432
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=90.11 E-value=3.1 Score=42.99 Aligned_cols=44 Identities=9% Similarity=-0.031 Sum_probs=33.7
Q ss_pred ceEEeCCeEeEEecCCCCCCc------eEEEEc--CC---cEEEecEEEEecCCCchh
Q psy9964 187 IDIVYQKKVAHYELPEQPLNN------VKIKFE--SG---ESIECKLLLGTDGARSQV 233 (595)
Q Consensus 187 v~i~~~~~v~~v~~~~~~~~~------v~v~~~--dG---~~~~adlvVgADG~~S~v 233 (595)
.+|+++++|++|+.. +++ +.|++. +| ++++||.||-|-..+...
T Consensus 256 ~~i~~~~~V~~I~~~---~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~ 310 (504)
T 1sez_A 256 DELRLNSRVLELSCS---CTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVK 310 (504)
T ss_dssp TTEETTCCEEEEEEE---CSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHH
T ss_pred ceEEcCCeEEEEEec---CCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHH
Confidence 689999999999863 333 677765 56 578999999998875433
No 433
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.92 E-value=0.2 Score=41.80 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.|+|+|+|.+|..+|..|.+. |.+|.++|+.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~----g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM----GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC----CCEEEEEeCCH
Confidence 599999999999999999998 89999999765
No 434
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=89.59 E-value=0.35 Score=49.93 Aligned_cols=61 Identities=26% Similarity=0.293 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc-----CCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE-----SGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~-----dG~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++.. ++++.+.|++. +|+++.+|.||-|.|..+.+
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRN-DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 456778888888899999999999999841 02445777776 45689999999999977654
No 435
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=89.56 E-value=0.42 Score=49.28 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCc-eEEEE-----cCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNN-VKIKF-----ESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~-v~v~~-----~dG~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. ++++ +.|++ .+|+++.+|+||-|.|..+.+
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATK---KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEE---CTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEE---cCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 45677788888889999999999999985 3334 77775 456789999999999987543
No 436
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=89.56 E-value=0.56 Score=49.59 Aligned_cols=62 Identities=13% Similarity=0.243 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCC----------------CCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPE----------------QPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~----------------~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|+++++++++++++... ..++.+++++.||+++.+|.||-|-|....+
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPET 269 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccch
Confidence 4567778888888999999999999997410 0245788899999999999999999986543
No 437
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=89.45 E-value=0.45 Score=48.91 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc-CC--cEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE-SG--ESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~-dG--~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|++++++++|++++. +++.+.+++. +| +++.+|+||-|-|....
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 212 ADVSKEIEKQFKKLGVTILTATKVESIAD---GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCEEEEEEE---CSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEE---cCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 34667778888788999999999999985 3446788876 67 58999999999997543
No 438
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.37 E-value=0.46 Score=48.78 Aligned_cols=58 Identities=10% Similarity=0.105 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEE-EcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIK-FESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~-~~dG~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|++++.+++|++++.. +++.+.|+ +.+|+ +.+|.||-|-|..+.
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 356778888888899999999999999852 23336888 89998 999999999997654
No 439
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=89.32 E-value=0.57 Score=48.33 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=41.5
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
-.|+|||||.+|+-+|..|++. |.+|+++++.+.... .++. .++....+.|++.|+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~~l~------~~d~---~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL----GSKTSLMIRHDKVLR------SFDS---MISTNCTEELENAGV 243 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSSSCT------TSCH---HHHHHHHHHHHHTTC
T ss_pred ccEEEECCCHHHHHHHHHHHHc----CCeEEEEEeCCcccc------ccCH---HHHHHHHHHHHHCCC
Confidence 3799999999999999999998 999999998764221 1121 244455667777775
No 440
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=89.12 E-value=0.95 Score=47.98 Aligned_cols=60 Identities=10% Similarity=0.079 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEE---cCCc--EEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKF---ESGE--SIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~---~dG~--~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+.+.|++|+++++|+++..+ +++.| .|.. .+|+ +++|+.||.|+|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~--~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKN--QDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEC--TTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEEC--CCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 568888999988899999999999999862 12322 3333 4676 68999999999998864
No 441
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=88.89 E-value=15 Score=40.65 Aligned_cols=47 Identities=17% Similarity=0.147 Sum_probs=36.3
Q ss_pred HHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC------CcEEEecEEEEecC
Q psy9964 178 VTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES------GESIECKLLLGTDG 228 (595)
Q Consensus 178 L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d------G~~~~adlvVgADG 228 (595)
|.+.+. .+++|+++++|++|+. .+++|+|++.| |++++||.||.|=-
T Consensus 574 L~~aLa-~~l~I~Lnt~V~~I~~---~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvP 626 (852)
T 2xag_A 574 VPVALA-EGLDIKLNTAVRQVRY---TASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 626 (852)
T ss_dssp HHHHHT-TTCCEECSEEEEEEEE---ETTEEEEEEEESSSTTCEEEEEESEEEECCC
T ss_pred HHHHHH-hCCCEEeCCeEEEEEE---cCCcEEEEEeecccCCCCeEEECCEEEECCC
Confidence 334443 3467999999999997 46689999876 56899999998864
No 442
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.76 E-value=0.43 Score=45.99 Aligned_cols=37 Identities=27% Similarity=0.483 Sum_probs=32.0
Q ss_pred CCCceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCC
Q psy9964 506 LGGKQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESG 546 (595)
Q Consensus 506 ~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~ 546 (595)
|.|....|.|+|+|.+|.++|..|++. |+ .|.++|..
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~----g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQK----ELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEecc
Confidence 344455899999999999999999998 88 99999976
No 443
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=88.58 E-value=0.29 Score=49.79 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
..|-+.|.+.+++.|++|+++++|+++.. .++.+.....+|++++||.||.|-|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~---~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIM---ENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEE---ETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEE---eCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 46788888888778999999999999986 34556544468889999999999998864
No 444
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.49 E-value=0.27 Score=44.71 Aligned_cols=33 Identities=24% Similarity=0.408 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|+|+|.+|..+|-.|.+. |.+|+++|+.+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~----g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR----KYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT----TCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 589999999999999999998 999999998764
No 445
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.48 E-value=0.32 Score=46.88 Aligned_cols=34 Identities=26% Similarity=0.520 Sum_probs=30.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
-.|.|||+|..|...|..++++ |++|+++|..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~----G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC----CCeEEEEECCHH
Confidence 3699999999999999999998 999999998763
No 446
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=88.48 E-value=0.92 Score=46.69 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCC---cEEEecEEEEecCCCc
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESG---ESIECKLLLGTDGARS 231 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG---~~~~adlvVgADG~~S 231 (595)
.++.+.|.+.+++.|++++++++|++++. +++.+.|++.++ +++.+|.||-|-|...
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~---~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEV---KNKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEE---CSSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEE---cCCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 45677788888889999999999999985 456788888865 5899999999999654
No 447
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=88.41 E-value=0.81 Score=48.79 Aligned_cols=60 Identities=8% Similarity=0.038 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCC--ceEEEE-cCCc--EEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLN--NVKIKF-ESGE--SIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~--~v~v~~-~dG~--~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+.+.|++|+++++|+++..+ ++. +|.+.. .+|+ +++|+.||.|.|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 478889999998899999999999999862 222 233332 4676 78999999999999875
No 448
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.24 E-value=0.69 Score=47.28 Aligned_cols=59 Identities=20% Similarity=0.277 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
.++.+.|.+.+++.|++++++++|++++. .++.+.....||+++.+|.||-|-|....+
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE---VDDEIITKTLDGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE---ETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc---CCCeEEEEEeCCCEEECCEEEECcCCCCCH
Confidence 35677788888889999999999999984 234554333488899999999999976554
No 449
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=88.09 E-value=0.33 Score=50.96 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhc-CCceEEeCCeEeEEecCCCCCC------ce-EEEEc---CCc--EEEecEEEEecCCCchhh
Q psy9964 172 DLIIDAVTKKLNT-LNIDIVYQKKVAHYELPEQPLN------NV-KIKFE---SGE--SIECKLLLGTDGARSQVR 234 (595)
Q Consensus 172 ~~L~~~L~~~~~~-~gv~i~~~~~v~~v~~~~~~~~------~v-~v~~~---dG~--~~~adlvVgADG~~S~vR 234 (595)
..+.+.|.+.+.+ .|++|+++++|+++..+ +++ .| .|... +|+ +++|+.||.|+|..|.+-
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~--~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVS--DKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEG--GGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEc--CCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 4577788888887 79999999999999852 112 32 24443 575 789999999999999863
No 450
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.99 E-value=0.49 Score=42.93 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=30.3
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.-.|+|||||.+|...|-.|.+. |.+|+|+++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~----GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE----GAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG----CCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 45799999999999999999998 99999998654
No 451
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.98 E-value=0.62 Score=48.23 Aligned_cols=58 Identities=19% Similarity=0.328 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcC---C--cEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFES---G--ESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~d---G--~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|+++++++++++++. +++.+.|++.+ | +++.+|.||-|-|....
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~---~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVK---SGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEE---ETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEE---eCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 45677788888889999999999999985 45677788764 5 48999999999997644
No 452
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.69 E-value=0.46 Score=45.64 Aligned_cols=32 Identities=22% Similarity=0.552 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.|.|+|+|..|..+|..|++. |.+|+++|+.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~----G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT----GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 453
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.64 E-value=0.49 Score=45.88 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=30.3
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|..|.++|..|++. |.+|.++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT----GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT----TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEeCCh
Confidence 4699999999999999999998 99999999865
No 454
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.56 E-value=1 Score=46.46 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCc-----EEEecEEEEecCCCc
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGE-----SIECKLLLGTDGARS 231 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~-----~~~adlvVgADG~~S 231 (595)
.++.+.|.+.+++.|+++++++++++++.. +++.+.|++.+|+ ++.+|.||-|-|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQ--DDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEEC--TTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 456777888888899999999999999852 3345788888764 799999999999653
No 455
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=87.53 E-value=0.66 Score=47.74 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCce-EEEE--cCCcEEEecEEEEecCCCchhhhh
Q psy9964 171 NDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNV-KIKF--ESGESIECKLLLGTDGARSQVRNA 236 (595)
Q Consensus 171 R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v-~v~~--~dG~~~~adlvVgADG~~S~vR~~ 236 (595)
...+.+.|.+.+++.|++++++++| ++.. +++.+ .|.. .+| ++++|.||.|+|..|.++..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~---~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRV---KDGKVTGFVTEKRGL-VEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEE---ETTEEEEEEETTTEE-ECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEE---eCCEEEEEEEEeCCC-eEEeeeEEECCCCCcccCcc
Confidence 4578888999886689999999999 9975 23333 2333 334 57899999999999988764
No 456
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.51 E-value=0.54 Score=45.49 Aligned_cols=36 Identities=25% Similarity=0.468 Sum_probs=31.0
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
|....|.|+|+|.+|.++|..|+.. |+ .|.++|..+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~----~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK----ELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCc
Confidence 4455899999999999999999998 77 999999765
No 457
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.32 E-value=0.78 Score=48.84 Aligned_cols=54 Identities=9% Similarity=0.145 Sum_probs=39.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.|+|||||.+|+-+|..|++. |.+|+++++.... +.++. .+.....+.|++.|+
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~l-------~~~d~---~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL----GGDVTVMVRSILL-------RGFDQ---QMAEKVGDYMENHGV 341 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCSS-------TTSCH---HHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHc----CCEEEEEECCcCc-------CcCCH---HHHHHHHHHHHhCCC
Confidence 699999999999999999998 9999999986311 11111 233444566777775
No 458
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=87.31 E-value=0.51 Score=45.93 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=30.0
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
..|.|+|+|-+|.++|..|++. |+ +|.++|..+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~----g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR----ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCh
Confidence 4799999999999999999998 87 999999765
No 459
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=87.24 E-value=0.47 Score=48.49 Aligned_cols=33 Identities=42% Similarity=0.633 Sum_probs=30.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|+|||||.+|+.+|..|++. |.+|+++++.+.
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~----g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ----GKNVTMIVRGER 182 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCeEEEEEcCCc
Confidence 799999999999999999998 999999998764
No 460
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.07 E-value=0.58 Score=45.45 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=30.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
..|.|+|+|.+|.++|..|++. |+ +|.++|..+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~----g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK----DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCeEEEEECCH
Confidence 4799999999999999999998 87 999999865
No 461
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=86.95 E-value=0.34 Score=45.52 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=29.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
-.|+|||||-+|...|..|.+. |.+|+|+++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~----Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT----GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG----TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC----CCEEEEEcCCC
Confidence 4699999999999999999998 99999999654
No 462
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.80 E-value=0.92 Score=45.61 Aligned_cols=52 Identities=21% Similarity=0.166 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCC
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGAR 230 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 230 (595)
..+.+.+.+.+++.||+++++++|++++. + .|+++||+++.+|+||-|-|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~-----~--~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE-----H--EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS-----S--EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC-----C--eEEECCCCEEeeeEEEECCCCC
Confidence 45777888888889999999999999973 2 2788999999999999998853
No 463
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.66 E-value=0.54 Score=46.26 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCCCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 505 SLGGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 505 ~~~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
++.+....|.|+|+|-.|.++|..|+++ |.+|.++++.+
T Consensus 24 ~m~~~~mkI~VIGaG~mG~alA~~La~~----G~~V~l~~r~~ 62 (356)
T 3k96_A 24 AMEPFKHPIAILGAGSWGTALALVLARK----GQKVRLWSYES 62 (356)
T ss_dssp ---CCCSCEEEECCSHHHHHHHHHHHTT----TCCEEEECSCH
T ss_pred cccccCCeEEEECccHHHHHHHHHHHHC----CCeEEEEeCCH
Confidence 3344456899999999999999999998 99999999864
No 464
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=86.55 E-value=0.52 Score=43.68 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=31.7
Q ss_pred CCceecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 507 GGKQYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 507 ~~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
......|.|+|.|-.|.++|..|++. |.+|.+.++.+.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~----G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADL----GHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT----TCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC----CCEEEEEeCChh
Confidence 33455799999999999999999998 999999998764
No 465
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=86.47 E-value=0.94 Score=47.20 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=37.3
Q ss_pred CceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCc
Q psy9964 186 NIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARS 231 (595)
Q Consensus 186 gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 231 (595)
+.+|+++++|++|+.. ++++|+|++.+|++++||.||.|-+...
T Consensus 214 ~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 214 QNWLKLSCEVKSITRE--PSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp GGGEETTCCEEEEEEC--TTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred CCEEEECCEEEEEEEc--CCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 3579999999999862 3567999999999999999999998653
No 466
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.12 E-value=0.56 Score=45.30 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=29.8
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|-.|.++|..|+++ |.+|+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~----g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS----GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT----SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCeEEEEEcCc
Confidence 4699999999999999999998 99999999865
No 467
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=86.04 E-value=0.97 Score=46.38 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQV 233 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 233 (595)
..+.+.|.+.+++.|++++++++|++++. +++.+.|++. +.++.+|.||-|-|..+.+
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAH---MDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEE---ETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE---eCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 45777888888889999999999999985 3445667776 4579999999999987654
No 468
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=86.01 E-value=0.97 Score=47.15 Aligned_cols=54 Identities=11% Similarity=0.181 Sum_probs=39.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
.++|||||.+|+-+|..|++. |.+|+++++.... +.++. .++....+.|++.|+
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~----G~~Vtlv~~~~~l-------~~~d~---~~~~~~~~~l~~~GV 265 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI----GLDVTVMVRSILL-------RGFDQ---DMANKIGEHMEEHGI 265 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT----TCCEEEEESSCSS-------TTSCH---HHHHHHHHHHHHTTC
T ss_pred eEEEECCcHHHHHHHHHHHHc----CCeEEEEeccccc-------ccCCH---HHHHHHHHHHHHCCC
Confidence 699999999999999999998 9999999975321 11121 244455666777775
No 469
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.65 E-value=0.65 Score=45.31 Aligned_cols=32 Identities=25% Similarity=0.433 Sum_probs=29.5
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESG 546 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~ 546 (595)
..|.|+|+|-+|.++|..|+++ |.+|.++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~----g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA----GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT----TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC----CCEEEEEECh
Confidence 4799999999999999999998 9999999974
No 470
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=85.64 E-value=0.85 Score=46.62 Aligned_cols=57 Identities=4% Similarity=0.003 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhcCCceEEeCCeEeEEecCCCC-CCce-EEEEcCCcEEEecEEEEecCCCch
Q psy9964 173 LIIDAVTKKLNTLNIDIVYQKKVAHYELPEQP-LNNV-KIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 173 ~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~-~~~v-~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.|-+.|.+.+++.|++|+++++|+++.. +. ++.+ .|+. +|++++||.||.|-|.++.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLY--KKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEE--ETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEE--ECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 6788888888888999999999999986 21 3443 4554 6889999999999998864
No 471
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=85.53 E-value=0.67 Score=44.00 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=30.7
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
-.|.|+|+|..|..+|..|++. |.+|.++|+.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~----G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH----GFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCeEEEEeCCHH
Confidence 3699999999999999999998 999999998763
No 472
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.49 E-value=1.3 Score=45.51 Aligned_cols=34 Identities=29% Similarity=0.370 Sum_probs=31.2
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
-.|+|||||.+|+-+|..|++. |.+|+++++.+.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~----g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM----GVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc----CCEEEEEEeCCc
Confidence 3799999999999999999998 999999998774
No 473
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.33 E-value=0.88 Score=40.92 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=30.7
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..|.|+|+|..|.++|..|++. |.+|.++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~----g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA----GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 4699999999999999999998 999999998753
No 474
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.28 E-value=0.58 Score=47.09 Aligned_cols=62 Identities=18% Similarity=0.365 Sum_probs=42.2
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCCcccCCCCCCCCCCchhhccHhHHHHHHHcCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPEKSLHFSKSSSYSNRVSSINSSSKQLFETIGA 579 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~~~~~~~~~~~~~~r~~~l~~~~~~~l~~lg~ 579 (595)
..|+|+|.|.+|..+|-.|... |.+|++||..+..-... ......++.-.+....+|++.|+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~----g~~vvvId~d~~~v~~~---~~~g~~vi~GDat~~~~L~~agi 66 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS----GVKMVVLDHDPDHIETL---RKFGMKVFYGDATRMDLLESAGA 66 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT----TCCEEEEECCHHHHHHH---HHTTCCCEESCTTCHHHHHHTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC----CCCEEEEECCHHHHHHH---HhCCCeEEEcCCCCHHHHHhcCC
Confidence 4699999999999999999998 99999999876421100 00112233334555566666665
No 475
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.24 E-value=0.87 Score=43.98 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=30.8
Q ss_pred CceecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 508 GKQYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 508 ~~~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
|....|.|+|+|.+|.++|..|++. ++ .+.++|..+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~----~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIK----QLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCh
Confidence 3345799999999999999999988 66 999999765
No 476
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.04 E-value=0.78 Score=44.35 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=29.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~ 547 (595)
..|.|+|+|-+|.++|..|++. |. +|.++|+.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~----g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR----GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 4799999999999999999998 87 999999764
No 477
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.68 E-value=0.85 Score=43.76 Aligned_cols=32 Identities=22% Similarity=0.473 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGP 547 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~ 547 (595)
.|.|+|+|.+|.++|..|+.. |+ .|.++|..+
T Consensus 2 kI~VIGaG~vG~~la~~la~~----g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR----GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCH
Confidence 589999999999999999998 87 999999765
No 478
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.64 E-value=0.92 Score=46.04 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=31.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..|.|||+|..|..+|..|+++ |++|+++|..+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a----G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA----GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC----CCeEEEEECcHH
Confidence 4699999999999999999998 999999998763
No 479
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.35 E-value=0.92 Score=43.01 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
.|.|+|+|.+|.++|..|++. |.+|.++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ----GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC----CCCEEEEEcCcc
Confidence 489999999999999999998 999999998764
No 480
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.25 E-value=0.72 Score=44.56 Aligned_cols=34 Identities=26% Similarity=0.520 Sum_probs=30.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
..|.|||+|..|...|..|+++ |++|.+.|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~----G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG----GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC----CCEEEEEeCCHH
Confidence 3699999999999999999998 999999998763
No 481
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.18 E-value=0.73 Score=47.35 Aligned_cols=34 Identities=15% Similarity=0.370 Sum_probs=31.0
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
...|.|+|.|-+|+.+|..|++. |.+|+++|..+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~----G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI----GHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhC----CCEEEEEECCH
Confidence 35799999999999999999998 99999999765
No 482
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.95 E-value=0.77 Score=42.62 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=30.4
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
...|+|+|+|-+|..+|..|++. |+ +++|+|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~----Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA----GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH----TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc----CCCeEEEEcCCC
Confidence 34799999999999999999998 86 899999875
No 483
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.86 E-value=1.2 Score=45.34 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.4
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
-.|.|+|.|.+|+++|..|.+. |.+|.+.|..+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~----G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL----GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT----TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC----CCEEEEEeCCc
Confidence 3699999999999999999998 99999999865
No 484
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=83.72 E-value=1 Score=43.45 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=29.6
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~ 547 (595)
...|.|+|+|-+|.++|+.|+.. ++ .+.++|..+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~----~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR----QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT----TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 46899999999999999999998 66 899999764
No 485
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=83.48 E-value=1.9 Score=44.47 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEc--CC--cEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFE--SG--ESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~--dG--~~~~adlvVgADG~~S~ 232 (595)
.++.+.+.+.+++. +++++++++++++. +++++.+++. || +++.+|.||-|-|....
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~---~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIE---KEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEE---CSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEE---cCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 35677777777766 99999999999985 4567888886 78 58999999999997643
No 486
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=83.46 E-value=1.1 Score=43.46 Aligned_cols=33 Identities=30% Similarity=0.581 Sum_probs=29.5
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
..|.|+|+|-+|..+|..|+.. |+ +|.++|..+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~----g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK----NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCeEEEEeCCH
Confidence 3799999999999999999998 77 899999765
No 487
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=83.45 E-value=1.4 Score=46.71 Aligned_cols=56 Identities=16% Similarity=0.310 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCch
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQ 232 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~ 232 (595)
.++.+.|.+.+++.|++++++++|++++. +++ .|++.+|+++.+|.||-|-|..+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~--~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEE---NGA--VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEG---GGT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEec---CCC--EEEECCCCEEEcCEEEEccCCCCC
Confidence 45677788888889999999999999985 222 577899999999999999998654
No 488
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.93 E-value=0.9 Score=43.89 Aligned_cols=33 Identities=18% Similarity=0.539 Sum_probs=29.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCc-eEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDL-SILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~-~v~~~e~~~ 547 (595)
..|.|+|+|.+|.++|..|++. |+ +|.++|..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~----g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD----NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCceEEEEeCCc
Confidence 4699999999999999999998 87 999999865
No 489
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.92 E-value=1 Score=43.52 Aligned_cols=34 Identities=21% Similarity=0.514 Sum_probs=29.3
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCc--eEEEecCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDL--SILMIESGP 547 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~--~v~~~e~~~ 547 (595)
...|.|+|+|.+|.++|..|+.. |+ .+.++|..+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~----~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ----GITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----TCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC----CCCceEEEEecch
Confidence 34799999999999999999987 66 899999754
No 490
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.86 E-value=0.55 Score=39.29 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=28.9
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
-.|.|+|+|.+|.++|..|... |.+|.++++.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~----g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP----QYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT----TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCEEEEEcCCH
Confidence 3699999999999999988886 88899999765
No 491
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.86 E-value=2 Score=44.88 Aligned_cols=60 Identities=8% Similarity=0.003 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHhcCCceEEeCCeEeEEecCCCCCCceEEEEcCCcEEEecEEEEecCCCchhh
Q psy9964 172 DLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQPLNNVKIKFESGESIECKLLLGTDGARSQVR 234 (595)
Q Consensus 172 ~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR 234 (595)
.++.+.|.+.+++.|++++.+..+.+++. .++.+.|.+.+++++.+|.|+-|=|+.-.+-
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~---~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK---MDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE---ETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe---cCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 45677788888889999999999999985 5678999999999999999999999866553
No 492
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.78 E-value=1.2 Score=44.32 Aligned_cols=35 Identities=11% Similarity=0.239 Sum_probs=31.0
Q ss_pred eecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCCC
Q psy9964 510 QYDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGPE 548 (595)
Q Consensus 510 ~~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~~ 548 (595)
...|+|+|+|.+|+.+|-.+... |.+|+++|..+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l----Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL----GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT----TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC----CCEEEEEcCCHH
Confidence 35799999999999999888887 999999998874
No 493
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.46 E-value=0.72 Score=44.07 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=30.0
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|-.|.++|..|+++ |.+|.++++.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~----g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS----LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH----CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC----CCeEEEEEecc
Confidence 3699999999999999999998 88999999875
No 494
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.33 E-value=1 Score=43.36 Aligned_cols=32 Identities=25% Similarity=0.550 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 512 DVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 512 dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
.|.|+|+|.+|.++|..|++. |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~----g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG----GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC----CCcEEEEECCH
Confidence 699999999999999999998 99999999764
No 495
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=82.31 E-value=2.5 Score=44.89 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcCCceEEeCCeEeEEecCCCC--CCceEEEEcCCcEEEecEEEEec
Q psy9964 171 NDLIIDAVTKKLNTLNIDIVYQKKVAHYELPEQP--LNNVKIKFESGESIECKLLLGTD 227 (595)
Q Consensus 171 R~~L~~~L~~~~~~~gv~i~~~~~v~~v~~~~~~--~~~v~v~~~dG~~~~adlvVgAD 227 (595)
-..|-+.|.+.++..|++|+++++|.+|... . +..+.|+..+|++++||.||..-
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~--~~~g~v~gV~~~~Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVD--KESRKCKAVIDQFGQRIISKHFIIED 433 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTTCCEEEEEETTSCEEECSEEEEEG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEe--CCCCeEEEEEeCCCCEEEcCEEEECh
Confidence 4578888999888899999999999999762 2 22334555789999999999843
No 496
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=82.24 E-value=1.2 Score=45.46 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=29.5
Q ss_pred ecEEEECCChHHHHHHHHHh--------------------cCCCCCCc-eEEEecCCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIA--------------------QNPTLKDL-SILMIESGPE 548 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~--------------------~~~~~~~~-~v~~~e~~~~ 548 (595)
-.|+|||||.+|+-+|..|+ +. |. +|.|+++++.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~----g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS----RVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC----CCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC----CCcEEEEEEcCCh
Confidence 47999999999999999998 44 76 7999998774
No 497
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.04 E-value=1 Score=46.03 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=30.3
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|..|..+|..|+++ |++|+++|+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~----G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV----GISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT----TCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC----CCeEEEEECCH
Confidence 3699999999999999999998 99999999765
No 498
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.97 E-value=1.4 Score=42.37 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=29.2
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|-+|.++|..|+ + |.+|.++++.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~----g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L----YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T----TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c----CCceEEEECCH
Confidence 46999999999999999999 8 99999999875
No 499
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.97 E-value=1 Score=44.25 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=30.1
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|+|.+|..+|..|++. |.+|.++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~----g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK----GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC----CCEEEEEeCCH
Confidence 4799999999999999999998 99999999764
No 500
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=81.93 E-value=1 Score=45.91 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=30.5
Q ss_pred ecEEEECCChHHHHHHHHHhcCCCCCCceEEEecCCC
Q psy9964 511 YDVVISGGGMIGTTLACAIAQNPTLKDLSILMIESGP 547 (595)
Q Consensus 511 ~dv~ivG~G~~G~~~a~~l~~~~~~~~~~v~~~e~~~ 547 (595)
..|.|+|.|-+|+.+|..|++. |.+|+++|+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~----G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL----GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc----CCEEEEEECCH
Confidence 3699999999999999999998 99999999875
Done!