Query psy9966
Match_columns 1101
No_of_seqs 543 out of 1975
Neff 6.1
Searched_HMMs 29240
Date Sat Aug 17 00:16:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9966.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9966hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 100.0 1.9E-52 6.4E-57 491.1 32.0 278 1-284 147-431 (431)
2 2i7t_A Cleavage and polyadenyl 100.0 3.2E-50 1.1E-54 475.6 30.9 287 1-287 164-459 (459)
3 3af5_A Putative uncharacterize 100.0 2.2E-43 7.5E-48 433.6 31.3 283 1-284 350-650 (651)
4 2xr1_A Cleavage and polyadenyl 100.0 1.1E-42 3.7E-47 426.5 28.3 283 1-284 338-639 (640)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 7.2E-42 2.5E-46 419.3 30.3 282 1-284 335-635 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 1.7E-31 5.7E-36 330.3 24.3 200 1-204 164-383 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 3.8E-28 1.3E-32 293.1 18.2 252 1-288 149-428 (555)
8 3bk2_A RNAse J, metal dependen 99.9 7.9E-26 2.7E-30 273.6 22.5 251 1-288 164-443 (562)
9 2az4_A Hypothetical protein EF 99.8 1.6E-19 5.6E-24 211.0 11.0 239 1-284 174-429 (429)
10 3zdk_A 5' exonuclease apollo; 99.7 3.9E-17 1.3E-21 185.6 15.0 194 1-256 106-304 (336)
11 4b87_A DNA cross-LINK repair 1 99.7 7.7E-16 2.6E-20 176.9 17.2 224 1-265 126-358 (367)
12 3tqs_A Ribosomal RNA small sub 96.7 0.0013 4.3E-08 71.8 5.5 44 687-731 27-70 (255)
13 3gru_A Dimethyladenosine trans 96.6 0.0024 8.2E-08 71.1 6.6 69 661-731 17-91 (295)
14 3mti_A RRNA methylase; SAM-dep 96.5 0.0022 7.5E-08 65.0 5.4 42 690-732 23-64 (185)
15 2gb4_A Thiopurine S-methyltran 96.5 0.0026 8.9E-08 69.0 5.9 52 679-731 58-109 (252)
16 2yxd_A Probable cobalt-precorr 96.3 0.005 1.7E-07 61.5 6.8 45 686-731 32-76 (183)
17 1pjz_A Thiopurine S-methyltran 96.3 0.0032 1.1E-07 65.5 5.3 51 679-731 13-63 (203)
18 3ofk_A Nodulation protein S; N 96.3 0.004 1.4E-07 64.6 5.8 60 671-731 33-92 (216)
19 4gek_A TRNA (CMO5U34)-methyltr 96.2 0.0049 1.7E-07 67.2 6.6 42 690-731 71-115 (261)
20 3njr_A Precorrin-6Y methylase; 96.2 0.0067 2.3E-07 63.2 7.0 43 688-731 54-96 (204)
21 1nkv_A Hypothetical protein YJ 96.2 0.0064 2.2E-07 64.7 6.9 45 688-732 35-79 (256)
22 3orh_A Guanidinoacetate N-meth 96.1 0.0041 1.4E-07 66.4 5.2 42 691-732 62-103 (236)
23 3jwg_A HEN1, methyltransferase 96.0 0.0077 2.6E-07 62.6 6.6 45 688-732 28-73 (219)
24 3u81_A Catechol O-methyltransf 96.0 0.0069 2.4E-07 63.5 6.3 53 679-731 48-102 (221)
25 3bus_A REBM, methyltransferase 96.0 0.0075 2.5E-07 64.9 6.7 44 688-731 60-103 (273)
26 2esr_A Methyltransferase; stru 96.0 0.0076 2.6E-07 60.5 6.3 44 688-731 30-73 (177)
27 3duw_A OMT, O-methyltransferas 96.0 0.0071 2.4E-07 63.2 6.3 52 680-731 49-102 (223)
28 3opn_A Putative hemolysin; str 96.0 0.0089 3E-07 64.0 7.0 53 679-732 27-80 (232)
29 3jwh_A HEN1; methyltransferase 96.0 0.0082 2.8E-07 62.4 6.6 43 689-731 29-72 (217)
30 3fut_A Dimethyladenosine trans 96.0 0.0087 3E-07 65.8 6.9 39 692-731 49-87 (271)
31 2k4m_A TR8_protein, UPF0146 pr 95.9 0.011 3.9E-07 58.9 6.8 64 661-726 9-73 (153)
32 3tr6_A O-methyltransferase; ce 95.9 0.0084 2.9E-07 62.6 6.3 52 680-731 55-108 (225)
33 3lbf_A Protein-L-isoaspartate 95.9 0.0097 3.3E-07 61.5 6.6 44 687-731 75-118 (210)
34 4dzr_A Protein-(glutamine-N5) 95.9 0.0096 3.3E-07 61.0 6.4 60 672-731 12-73 (215)
35 3ntv_A MW1564 protein; rossman 95.9 0.0087 3E-07 63.5 6.2 52 680-731 62-114 (232)
36 2fhp_A Methylase, putative; al 95.8 0.009 3.1E-07 60.1 6.0 42 689-730 44-85 (187)
37 3hem_A Cyclopropane-fatty-acyl 95.8 0.0084 2.9E-07 65.9 6.2 44 689-732 72-115 (302)
38 3hm2_A Precorrin-6Y C5,15-meth 95.8 0.0098 3.3E-07 59.4 6.1 51 680-731 17-68 (178)
39 3c3p_A Methyltransferase; NP_9 95.8 0.0082 2.8E-07 62.3 5.7 42 689-730 56-99 (210)
40 3r3h_A O-methyltransferase, SA 95.8 0.0086 2.9E-07 64.3 6.0 54 679-732 50-105 (242)
41 4azs_A Methyltransferase WBDD; 95.8 0.016 5.6E-07 70.0 9.0 60 672-732 48-108 (569)
42 3tfw_A Putative O-methyltransf 95.8 0.0099 3.4E-07 63.8 6.3 53 680-732 54-108 (248)
43 3dr5_A Putative O-methyltransf 95.8 0.0084 2.9E-07 63.5 5.6 53 679-731 43-100 (221)
44 2gpy_A O-methyltransferase; st 95.7 0.0093 3.2E-07 62.9 5.8 43 689-731 54-97 (233)
45 1dus_A MJ0882; hypothetical pr 95.7 0.012 4.2E-07 59.1 6.4 41 689-730 52-92 (194)
46 3p9n_A Possible methyltransfer 95.7 0.013 4.5E-07 59.6 6.7 42 689-730 44-85 (189)
47 3ftd_A Dimethyladenosine trans 95.7 0.007 2.4E-07 65.6 4.8 41 689-729 31-71 (249)
48 2hnk_A SAM-dependent O-methylt 95.7 0.0097 3.3E-07 63.2 5.9 43 689-731 60-104 (239)
49 3e05_A Precorrin-6Y C5,15-meth 95.7 0.014 4.7E-07 60.2 6.8 44 688-731 39-83 (204)
50 3f4k_A Putative methyltransfer 95.7 0.0083 2.8E-07 63.8 5.3 45 688-732 45-89 (257)
51 2avd_A Catechol-O-methyltransf 95.7 0.012 4.1E-07 61.6 6.4 52 680-731 60-113 (229)
52 2p7i_A Hypothetical protein; p 95.7 0.011 3.9E-07 61.9 6.2 50 680-730 33-82 (250)
53 1kpg_A CFA synthase;, cyclopro 95.7 0.0093 3.2E-07 64.8 5.6 43 689-731 64-106 (287)
54 1ws6_A Methyltransferase; stru 95.6 0.012 4.1E-07 58.2 5.8 41 690-731 42-82 (171)
55 3ou2_A SAM-dependent methyltra 95.6 0.01 3.5E-07 61.2 5.5 49 680-729 37-85 (218)
56 2o57_A Putative sarcosine dime 95.6 0.013 4.4E-07 64.1 6.5 47 686-732 79-125 (297)
57 2ex4_A Adrenal gland protein A 95.6 0.013 4.6E-07 61.9 6.5 57 675-731 61-121 (241)
58 1l3i_A Precorrin-6Y methyltran 95.6 0.016 5.6E-07 58.0 6.8 44 686-730 30-73 (192)
59 1sui_A Caffeoyl-COA O-methyltr 95.6 0.014 4.6E-07 62.9 6.5 52 680-731 70-123 (247)
60 3dlc_A Putative S-adenosyl-L-m 95.6 0.0086 2.9E-07 61.6 4.8 40 692-731 46-85 (219)
61 1qam_A ERMC' methyltransferase 95.6 0.01 3.5E-07 63.9 5.5 41 689-730 30-70 (244)
62 3kkz_A Uncharacterized protein 95.6 0.0098 3.3E-07 64.0 5.3 44 689-732 46-89 (267)
63 3thr_A Glycine N-methyltransfe 95.6 0.012 4.1E-07 64.1 5.9 52 679-731 47-98 (293)
64 3pfg_A N-methyltransferase; N, 95.5 0.016 5.5E-07 62.1 6.8 55 673-730 36-90 (263)
65 2xvm_A Tellurite resistance pr 95.5 0.015 5.1E-07 59.0 6.2 42 689-731 32-73 (199)
66 3ujc_A Phosphoethanolamine N-m 95.5 0.009 3.1E-07 63.6 4.7 42 689-730 55-96 (266)
67 1wzn_A SAM-dependent methyltra 95.5 0.018 6.3E-07 61.0 7.1 57 673-731 26-82 (252)
68 3grz_A L11 mtase, ribosomal pr 95.5 0.016 5.5E-07 59.6 6.4 42 690-731 61-102 (205)
69 3gdh_A Trimethylguanosine synt 95.5 0.014 4.8E-07 61.7 6.1 43 689-732 78-120 (241)
70 3iv6_A Putative Zn-dependent a 95.5 0.012 4.1E-07 64.3 5.7 42 689-731 45-86 (261)
71 4hg2_A Methyltransferase type 95.5 0.0095 3.3E-07 64.8 4.8 34 691-725 41-74 (257)
72 3e8s_A Putative SAM dependent 95.5 0.017 5.8E-07 59.7 6.6 50 680-731 44-93 (227)
73 3dtn_A Putative methyltransfer 95.5 0.013 4.4E-07 61.5 5.6 44 688-731 43-87 (234)
74 2yxe_A Protein-L-isoaspartate 95.5 0.016 5.4E-07 60.1 6.3 44 688-731 76-121 (215)
75 1ne2_A Hypothetical protein TA 95.5 0.02 7E-07 58.7 7.0 56 674-730 37-92 (200)
76 3cbg_A O-methyltransferase; cy 95.4 0.013 4.6E-07 62.1 5.6 43 689-731 72-116 (232)
77 1wy7_A Hypothetical protein PH 95.4 0.026 8.8E-07 58.1 7.6 43 689-731 49-91 (207)
78 2p8j_A S-adenosylmethionine-de 95.4 0.014 4.7E-07 60.0 5.5 47 684-730 18-64 (209)
79 1zq9_A Probable dimethyladenos 95.4 0.015 5E-07 64.1 6.1 43 688-731 27-69 (285)
80 1jg1_A PIMT;, protein-L-isoasp 95.4 0.015 5.1E-07 61.5 5.9 44 688-731 90-133 (235)
81 2bm8_A Cephalosporin hydroxyla 95.4 0.012 4.1E-07 62.9 5.1 40 690-729 82-126 (236)
82 4htf_A S-adenosylmethionine-de 95.4 0.018 6.2E-07 62.5 6.7 52 677-731 58-109 (285)
83 2h1r_A Dimethyladenosine trans 95.4 0.014 4.9E-07 64.7 5.9 45 686-731 39-83 (299)
84 3hnr_A Probable methyltransfer 95.4 0.017 5.8E-07 59.9 6.1 50 679-730 36-85 (220)
85 3vc1_A Geranyl diphosphate 2-C 95.3 0.012 4.2E-07 65.0 5.2 45 688-732 116-160 (312)
86 1vbf_A 231AA long hypothetical 95.3 0.02 6.9E-07 60.0 6.6 43 688-731 69-111 (231)
87 3h2b_A SAM-dependent methyltra 95.3 0.015 5E-07 59.7 5.2 41 690-731 42-82 (203)
88 2fca_A TRNA (guanine-N(7)-)-me 95.3 0.013 4.3E-07 61.5 4.8 42 690-731 39-81 (213)
89 3lpm_A Putative methyltransfer 95.3 0.014 4.9E-07 62.8 5.3 53 679-731 38-91 (259)
90 3g5t_A Trans-aconitate 3-methy 95.3 0.021 7.3E-07 62.6 6.8 44 689-732 36-81 (299)
91 3uzu_A Ribosomal RNA small sub 95.3 0.014 4.8E-07 64.4 5.3 44 688-731 41-87 (279)
92 2fk8_A Methoxy mycolic acid sy 95.3 0.015 5E-07 64.4 5.5 43 689-731 90-132 (318)
93 3m33_A Uncharacterized protein 95.3 0.021 7.1E-07 60.1 6.4 41 690-731 49-89 (226)
94 2avn_A Ubiquinone/menaquinone 95.2 0.025 8.6E-07 60.7 7.1 53 675-730 42-94 (260)
95 1zx0_A Guanidinoacetate N-meth 95.2 0.015 5.1E-07 61.5 5.2 43 690-732 61-103 (236)
96 3q87_B N6 adenine specific DNA 95.2 0.019 6.7E-07 57.8 5.8 49 673-725 9-57 (170)
97 1nv8_A HEMK protein; class I a 95.2 0.018 6.1E-07 63.4 6.0 59 673-731 107-165 (284)
98 1yzh_A TRNA (guanine-N(7)-)-me 95.2 0.015 5E-07 60.6 5.0 43 690-732 42-85 (214)
99 3bxo_A N,N-dimethyltransferase 95.2 0.023 7.9E-07 59.5 6.6 55 673-730 26-80 (239)
100 2ift_A Putative methylase HI07 95.2 0.016 5.3E-07 60.2 5.2 41 690-730 54-94 (201)
101 3mq2_A 16S rRNA methyltransfer 95.2 0.015 5E-07 60.6 5.0 39 690-728 28-67 (218)
102 3c3y_A Pfomt, O-methyltransfer 95.2 0.02 6.9E-07 61.0 6.1 51 680-730 61-113 (237)
103 3hp7_A Hemolysin, putative; st 95.1 0.025 8.5E-07 62.8 6.7 54 677-730 73-126 (291)
104 3m70_A Tellurite resistance pr 95.1 0.022 7.4E-07 61.9 6.2 42 689-731 120-161 (286)
105 3cc8_A Putative methyltransfer 95.1 0.015 5.1E-07 60.2 4.6 40 689-729 32-71 (230)
106 3ege_A Putative methyltransfer 95.1 0.013 4.5E-07 63.0 4.3 46 679-725 24-69 (261)
107 1y8c_A S-adenosylmethionine-de 95.1 0.023 7.7E-07 59.6 6.0 42 689-731 37-78 (246)
108 2pbf_A Protein-L-isoaspartate 95.0 0.029 1E-06 58.6 6.7 43 689-731 80-128 (227)
109 3lcc_A Putative methyl chlorid 95.0 0.014 4.9E-07 61.4 4.2 41 691-732 68-108 (235)
110 3gu3_A Methyltransferase; alph 95.0 0.022 7.4E-07 62.2 5.8 53 679-731 12-66 (284)
111 2vdw_A Vaccinia virus capping 95.0 0.018 6.3E-07 63.9 5.3 44 690-733 49-92 (302)
112 3cgg_A SAM-dependent methyltra 95.0 0.027 9.2E-07 56.6 6.1 49 679-730 38-86 (195)
113 1qyr_A KSGA, high level kasuga 95.0 0.017 5.8E-07 62.7 4.9 39 689-730 21-61 (252)
114 3fpf_A Mtnas, putative unchara 95.0 0.029 9.8E-07 62.4 6.7 49 684-732 117-166 (298)
115 3mgg_A Methyltransferase; NYSG 95.0 0.018 6.1E-07 62.1 5.0 55 677-731 25-80 (276)
116 3ckk_A TRNA (guanine-N(7)-)-me 95.0 0.018 6.1E-07 61.6 4.8 44 690-733 47-91 (235)
117 3bzb_A Uncharacterized protein 94.9 0.025 8.4E-07 62.0 6.0 56 674-730 64-121 (281)
118 3dli_A Methyltransferase; PSI- 94.9 0.016 5.5E-07 61.2 4.3 41 689-730 41-81 (240)
119 3e23_A Uncharacterized protein 94.9 0.026 8.8E-07 58.3 5.7 40 690-730 44-83 (211)
120 3eey_A Putative rRNA methylase 94.9 0.033 1.1E-06 56.8 6.4 42 690-731 23-66 (197)
121 1xtp_A LMAJ004091AAA; SGPP, st 94.9 0.027 9.4E-07 59.6 6.0 59 672-731 77-135 (254)
122 1xdz_A Methyltransferase GIDB; 94.9 0.017 5.8E-07 61.4 4.4 42 690-731 71-113 (240)
123 3bkx_A SAM-dependent methyltra 94.9 0.034 1.2E-06 59.8 6.8 44 679-723 34-79 (275)
124 2fpo_A Methylase YHHF; structu 94.9 0.024 8E-07 58.8 5.3 41 690-730 55-95 (202)
125 2kw5_A SLR1183 protein; struct 94.8 0.021 7.2E-07 58.4 4.8 39 692-731 32-70 (202)
126 1ve3_A Hypothetical protein PH 94.8 0.037 1.3E-06 57.4 6.8 41 690-731 39-79 (227)
127 1u2z_A Histone-lysine N-methyl 94.8 0.027 9.3E-07 65.8 6.3 42 688-729 241-283 (433)
128 3bkw_A MLL3908 protein, S-aden 94.8 0.027 9.2E-07 59.1 5.7 46 683-729 37-83 (243)
129 1jsx_A Glucose-inhibited divis 94.8 0.022 7.6E-07 58.5 4.9 42 690-731 66-108 (207)
130 2nyu_A Putative ribosomal RNA 94.8 0.034 1.2E-06 56.5 6.2 35 689-723 22-66 (196)
131 3l8d_A Methyltransferase; stru 94.8 0.027 9.1E-07 59.2 5.5 39 690-729 54-92 (242)
132 3bgv_A MRNA CAP guanine-N7 met 94.8 0.032 1.1E-06 61.6 6.4 43 690-732 35-77 (313)
133 1vl5_A Unknown conserved prote 94.8 0.032 1.1E-06 59.6 6.2 42 689-731 37-78 (260)
134 3g07_A 7SK snRNA methylphospha 94.8 0.018 6.2E-07 63.3 4.4 44 690-733 47-91 (292)
135 3p2e_A 16S rRNA methylase; met 94.7 0.024 8.2E-07 60.2 5.0 36 690-725 25-61 (225)
136 2ozv_A Hypothetical protein AT 94.7 0.022 7.5E-07 61.7 4.8 54 678-731 25-79 (260)
137 3dxy_A TRNA (guanine-N(7)-)-me 94.7 0.023 7.7E-07 60.0 4.8 43 690-732 35-78 (218)
138 2yqz_A Hypothetical protein TT 94.7 0.031 1.1E-06 59.3 5.9 41 689-730 39-79 (263)
139 3g2m_A PCZA361.24; SAM-depende 94.7 0.026 9E-07 61.8 5.4 40 692-732 85-124 (299)
140 1r18_A Protein-L-isoaspartate( 94.6 0.021 7.1E-07 60.0 4.3 42 690-731 85-133 (227)
141 3g89_A Ribosomal RNA small sub 94.5 0.023 8E-07 61.3 4.5 42 690-731 81-123 (249)
142 3ccf_A Cyclopropane-fatty-acyl 94.5 0.035 1.2E-06 60.1 5.9 40 689-729 57-96 (279)
143 1i1n_A Protein-L-isoaspartate 94.5 0.035 1.2E-06 57.9 5.7 43 689-731 77-121 (226)
144 1xxl_A YCGJ protein; structura 94.5 0.043 1.5E-06 58.1 6.4 53 677-731 10-62 (239)
145 3kr9_A SAM-dependent methyltra 94.5 0.02 6.7E-07 61.3 3.7 41 690-730 16-57 (225)
146 3gnl_A Uncharacterized protein 94.5 0.02 6.8E-07 62.0 3.7 40 691-730 23-63 (244)
147 2fyt_A Protein arginine N-meth 94.5 0.049 1.7E-06 61.5 7.1 50 680-730 55-104 (340)
148 2h00_A Methyltransferase 10 do 94.5 0.034 1.2E-06 59.3 5.6 42 690-731 66-108 (254)
149 1m6y_A S-adenosyl-methyltransf 94.5 0.015 5E-07 64.9 2.7 43 690-732 27-70 (301)
150 1fbn_A MJ fibrillarin homologu 94.4 0.03 1E-06 59.1 4.9 42 689-730 74-116 (230)
151 2plw_A Ribosomal RNA methyltra 94.4 0.039 1.3E-06 56.4 5.7 34 690-723 23-59 (201)
152 3sm3_A SAM-dependent methyltra 94.4 0.028 9.5E-07 58.5 4.7 41 690-731 31-71 (235)
153 3evz_A Methyltransferase; NYSG 94.4 0.039 1.3E-06 57.7 5.8 42 690-731 56-98 (230)
154 3dh0_A SAM dependent methyltra 94.4 0.031 1E-06 57.9 4.9 43 689-731 37-81 (219)
155 2g72_A Phenylethanolamine N-me 94.4 0.029 9.8E-07 61.2 4.8 44 689-732 71-114 (289)
156 3i9f_A Putative type 11 methyl 94.4 0.021 7.2E-07 56.7 3.4 42 689-731 17-58 (170)
157 2pxx_A Uncharacterized protein 94.4 0.031 1.1E-06 57.2 4.8 42 690-731 43-84 (215)
158 3ggd_A SAM-dependent methyltra 94.3 0.042 1.4E-06 58.1 5.7 41 690-731 57-97 (245)
159 1ej0_A FTSJ; methyltransferase 94.3 0.051 1.7E-06 53.3 6.0 44 679-722 12-57 (180)
160 1p91_A Ribosomal RNA large sub 94.3 0.046 1.6E-06 58.7 6.1 41 690-730 86-127 (269)
161 3lec_A NADB-rossmann superfami 94.3 0.023 8E-07 60.9 3.7 41 690-730 22-63 (230)
162 2b25_A Hypothetical protein; s 94.3 0.043 1.5E-06 61.4 6.1 46 687-732 103-150 (336)
163 1nt2_A Fibrillarin-like PRE-rR 94.3 0.031 1.1E-06 58.6 4.6 36 690-725 58-94 (210)
164 1uwv_A 23S rRNA (uracil-5-)-me 94.3 0.052 1.8E-06 63.3 7.0 57 673-730 270-326 (433)
165 3g5l_A Putative S-adenosylmeth 94.2 0.037 1.3E-06 58.7 5.2 42 689-730 44-85 (253)
166 3mb5_A SAM-dependent methyltra 94.2 0.048 1.6E-06 58.0 6.0 48 684-731 88-137 (255)
167 2y1w_A Histone-arginine methyl 94.2 0.064 2.2E-06 60.6 7.3 40 689-729 50-89 (348)
168 1yub_A Ermam, rRNA methyltrans 94.2 0.013 4.5E-07 62.7 1.5 39 689-728 29-67 (245)
169 3uwp_A Histone-lysine N-methyl 94.1 0.055 1.9E-06 62.8 6.6 54 678-732 163-217 (438)
170 2yvl_A TRMI protein, hypotheti 94.1 0.05 1.7E-06 57.4 5.8 43 688-731 90-132 (248)
171 2vdv_E TRNA (guanine-N(7)-)-me 94.1 0.036 1.2E-06 59.2 4.6 43 690-732 50-93 (246)
172 3d2l_A SAM-dependent methyltra 94.0 0.055 1.9E-06 56.7 6.0 39 691-731 35-73 (243)
173 3q7e_A Protein arginine N-meth 94.0 0.045 1.5E-06 61.9 5.6 41 690-731 67-107 (349)
174 2qe6_A Uncharacterized protein 94.0 0.057 2E-06 59.0 6.2 53 679-731 67-123 (274)
175 4e2x_A TCAB9; kijanose, tetron 94.0 0.042 1.4E-06 63.3 5.3 42 689-731 107-148 (416)
176 1i9g_A Hypothetical protein RV 94.0 0.061 2.1E-06 58.1 6.3 44 687-730 97-142 (280)
177 1dl5_A Protein-L-isoaspartate 94.0 0.058 2E-06 60.0 6.3 44 688-731 74-119 (317)
178 1g6q_1 HnRNP arginine N-methyl 93.9 0.062 2.1E-06 60.2 6.5 40 690-730 39-78 (328)
179 2p35_A Trans-aconitate 2-methy 93.9 0.04 1.4E-06 58.5 4.6 43 689-731 33-76 (259)
180 2b3t_A Protein methyltransfera 93.9 0.065 2.2E-06 58.1 6.4 58 673-731 94-152 (276)
181 4dcm_A Ribosomal RNA large sub 93.9 0.056 1.9E-06 62.0 6.1 40 691-730 224-264 (375)
182 2pwy_A TRNA (adenine-N(1)-)-me 93.8 0.063 2.2E-06 56.9 6.1 44 687-730 94-139 (258)
183 3dou_A Ribosomal RNA large sub 93.8 0.069 2.3E-06 55.1 6.0 34 689-723 25-58 (191)
184 2gs9_A Hypothetical protein TT 93.8 0.047 1.6E-06 56.2 4.8 46 679-730 28-74 (211)
185 2nxc_A L11 mtase, ribosomal pr 93.7 0.093 3.2E-06 56.5 7.1 40 690-730 121-160 (254)
186 2frn_A Hypothetical protein PH 93.7 0.067 2.3E-06 58.4 6.1 60 665-730 107-166 (278)
187 3ocj_A Putative exported prote 93.7 0.055 1.9E-06 59.5 5.4 44 689-732 118-163 (305)
188 1ri5_A MRNA capping enzyme; me 93.7 0.071 2.4E-06 57.7 6.2 42 690-731 65-106 (298)
189 3r0q_C Probable protein argini 93.6 0.094 3.2E-06 60.0 7.3 43 688-731 62-104 (376)
190 3b3j_A Histone-arginine methyl 93.5 0.092 3.1E-06 62.2 7.2 42 689-731 158-199 (480)
191 1o9g_A RRNA methyltransferase; 93.5 0.056 1.9E-06 57.7 4.8 42 690-731 52-96 (250)
192 1g8a_A Fibrillarin-like PRE-rR 93.4 0.049 1.7E-06 57.0 4.1 41 689-729 73-115 (227)
193 2i62_A Nicotinamide N-methyltr 93.4 0.032 1.1E-06 59.3 2.8 43 690-732 57-99 (265)
194 3htx_A HEN1; HEN1, small RNA m 93.4 0.08 2.7E-06 66.1 6.4 54 677-731 710-765 (950)
195 1yb2_A Hypothetical protein TA 93.3 0.056 1.9E-06 58.7 4.6 50 681-730 102-153 (275)
196 3a27_A TYW2, uncharacterized p 93.2 0.088 3E-06 57.4 6.0 59 666-730 102-161 (272)
197 3giw_A Protein of unknown func 93.1 0.12 4E-06 56.9 6.6 56 676-731 65-124 (277)
198 2ipx_A RRNA 2'-O-methyltransfe 93.0 0.067 2.3E-06 56.3 4.5 39 690-728 78-118 (233)
199 2r6z_A UPF0341 protein in RSP 93.0 0.061 2.1E-06 58.5 4.2 32 690-722 84-115 (258)
200 3tma_A Methyltransferase; thum 92.9 0.084 2.9E-06 59.6 5.5 55 677-731 191-247 (354)
201 3dmg_A Probable ribosomal RNA 92.9 0.12 4E-06 59.5 6.6 40 690-730 234-273 (381)
202 2f8l_A Hypothetical protein LM 92.9 0.092 3.2E-06 59.1 5.7 68 661-730 104-177 (344)
203 1o54_A SAM-dependent O-methylt 92.8 0.11 3.8E-06 56.2 6.0 44 687-730 110-155 (277)
204 2igt_A SAM dependent methyltra 92.8 0.17 5.9E-06 56.9 7.7 62 665-730 132-193 (332)
205 2a14_A Indolethylamine N-methy 92.7 0.054 1.9E-06 58.4 3.4 43 690-732 56-98 (263)
206 1x19_A CRTF-related protein; m 92.7 0.15 5.1E-06 57.4 7.1 43 688-731 189-232 (359)
207 1ixk_A Methyltransferase; open 92.6 0.11 3.9E-06 57.8 5.9 53 679-731 108-162 (315)
208 3k6r_A Putative transferase PH 92.5 0.1 3.4E-06 57.6 5.2 59 665-729 107-165 (278)
209 3tm4_A TRNA (guanine N2-)-meth 92.5 0.12 4E-06 59.1 5.9 53 678-731 207-260 (373)
210 2jjq_A Uncharacterized RNA met 92.3 0.17 5.9E-06 59.0 7.1 40 689-729 290-329 (425)
211 3gjy_A Spermidine synthase; AP 92.2 0.15 5.1E-06 57.2 6.2 40 692-731 92-132 (317)
212 3ajd_A Putative methyltransfer 92.2 0.11 3.9E-06 56.4 5.1 52 680-731 74-127 (274)
213 4fsd_A Arsenic methyltransfera 92.0 0.11 3.9E-06 59.3 5.0 43 690-732 84-128 (383)
214 1mjf_A Spermidine synthase; sp 92.0 0.13 4.3E-06 56.4 5.2 43 689-731 75-117 (281)
215 3dp7_A SAM-dependent methyltra 91.9 0.16 5.5E-06 57.5 6.1 43 688-731 178-221 (363)
216 1xj5_A Spermidine synthase 1; 91.9 0.17 6E-06 57.0 6.3 44 688-731 119-163 (334)
217 3bt7_A TRNA (uracil-5-)-methyl 91.9 0.2 6.7E-06 57.1 6.9 55 674-730 199-253 (369)
218 3mcz_A O-methyltransferase; ad 91.9 0.18 6.1E-06 56.5 6.4 40 690-730 180-220 (352)
219 2zfu_A Nucleomethylin, cerebra 91.8 0.14 4.7E-06 52.9 5.0 40 680-723 58-97 (215)
220 1uir_A Polyamine aminopropyltr 91.7 0.19 6.5E-06 56.0 6.3 44 688-731 76-120 (314)
221 4hc4_A Protein arginine N-meth 91.6 0.23 7.9E-06 57.0 6.9 38 690-729 84-122 (376)
222 2ip2_A Probable phenazine-spec 91.5 0.26 8.8E-06 54.8 7.1 40 691-731 169-209 (334)
223 1iy9_A Spermidine synthase; ro 91.4 0.15 5.1E-06 55.7 5.0 43 689-731 75-118 (275)
224 2r3s_A Uncharacterized protein 91.3 0.23 7.9E-06 54.9 6.5 43 688-731 164-207 (335)
225 4df3_A Fibrillarin-like rRNA/T 91.3 0.2 6.7E-06 53.8 5.6 41 690-730 78-120 (233)
226 3adn_A Spermidine synthase; am 91.2 0.19 6.5E-06 55.6 5.6 44 688-731 82-126 (294)
227 3bwc_A Spermidine synthase; SA 90.9 0.2 6.9E-06 55.5 5.5 44 688-731 94-138 (304)
228 2ih2_A Modification methylase 90.9 0.24 8.3E-06 56.7 6.2 50 679-728 29-80 (421)
229 2o07_A Spermidine synthase; st 90.7 0.19 6.6E-06 55.8 5.1 44 688-731 94-138 (304)
230 2pt6_A Spermidine synthase; tr 90.7 0.28 9.5E-06 54.9 6.4 43 689-731 116-159 (321)
231 2pjd_A Ribosomal RNA small sub 90.6 0.12 4E-06 58.2 3.3 41 690-730 197-238 (343)
232 1inl_A Spermidine synthase; be 90.6 0.28 9.7E-06 54.1 6.2 43 689-731 90-133 (296)
233 3gwz_A MMCR; methyltransferase 90.5 0.3 1E-05 55.3 6.5 42 688-730 201-243 (369)
234 3ll7_A Putative methyltransfer 90.4 0.19 6.5E-06 58.3 4.8 42 690-732 94-135 (410)
235 2i7c_A Spermidine synthase; tr 90.2 0.25 8.4E-06 54.2 5.2 43 689-731 78-121 (283)
236 2b2c_A Spermidine synthase; be 90.1 0.23 7.8E-06 55.5 5.0 43 689-731 108-151 (314)
237 2cmg_A Spermidine synthase; tr 90.0 0.17 5.8E-06 55.1 3.8 40 689-729 72-111 (262)
238 1qzz_A RDMB, aclacinomycin-10- 90.0 0.27 9.2E-06 55.4 5.6 42 689-731 182-224 (374)
239 2zig_A TTHA0409, putative modi 90.0 0.31 1.1E-05 53.7 6.0 53 679-734 227-279 (297)
240 2yx1_A Hypothetical protein MJ 89.7 0.31 1.1E-05 54.7 5.7 38 690-729 196-233 (336)
241 3fzg_A 16S rRNA methylase; met 89.6 0.43 1.5E-05 49.8 6.2 42 690-731 50-92 (200)
242 1vlm_A SAM-dependent methyltra 89.6 0.25 8.6E-06 51.2 4.5 36 690-730 48-83 (219)
243 2oyr_A UPF0341 protein YHIQ; a 89.5 0.21 7.1E-06 54.4 3.9 34 691-725 90-123 (258)
244 1sqg_A SUN protein, FMU protei 89.2 0.43 1.5E-05 55.4 6.5 54 678-731 235-289 (429)
245 3id6_C Fibrillarin-like rRNA/T 89.1 0.39 1.3E-05 51.4 5.7 36 689-724 76-113 (232)
246 1tw3_A COMT, carminomycin 4-O- 89.0 0.4 1.4E-05 53.7 6.0 41 689-730 183-224 (360)
247 2oxt_A Nucleoside-2'-O-methylt 89.0 0.3 1E-05 53.2 4.7 31 690-722 75-105 (265)
248 3m6w_A RRNA methylase; rRNA me 89.0 0.32 1.1E-05 57.3 5.2 54 679-732 91-146 (464)
249 2b78_A Hypothetical protein SM 88.9 0.37 1.2E-05 55.3 5.6 41 690-730 213-253 (385)
250 3c0k_A UPF0064 protein YCCW; P 88.6 0.42 1.4E-05 54.8 5.9 42 689-730 220-261 (396)
251 2yxl_A PH0851 protein, 450AA l 88.5 0.41 1.4E-05 56.1 5.8 54 678-731 248-303 (450)
252 2dul_A N(2),N(2)-dimethylguano 88.5 0.66 2.3E-05 53.1 7.4 64 662-729 24-88 (378)
253 2wa2_A Non-structural protein 88.4 0.3 1E-05 53.6 4.2 31 690-722 83-113 (276)
254 2frx_A Hypothetical protein YE 88.2 0.44 1.5E-05 56.4 5.8 54 679-732 105-162 (479)
255 3i53_A O-methyltransferase; CO 88.2 0.33 1.1E-05 54.0 4.5 41 690-731 170-211 (332)
256 2b9e_A NOL1/NOP2/SUN domain fa 88.1 0.42 1.4E-05 53.3 5.3 53 679-731 92-146 (309)
257 1fp2_A Isoflavone O-methyltran 88.0 0.28 9.6E-06 55.1 3.9 36 689-725 188-224 (352)
258 4dmg_A Putative uncharacterize 87.8 0.47 1.6E-05 54.7 5.6 40 690-730 215-254 (393)
259 3p9c_A Caffeic acid O-methyltr 87.2 0.44 1.5E-05 54.1 4.8 35 688-723 200-235 (364)
260 3reo_A (ISO)eugenol O-methyltr 86.9 0.35 1.2E-05 54.9 3.8 34 689-723 203-237 (368)
261 3m4x_A NOL1/NOP2/SUN family pr 86.6 0.48 1.6E-05 55.7 4.8 53 679-731 95-149 (456)
262 2e7y_A TRNAse Z; tRNA maturati 86.5 1.2 4.2E-05 47.5 7.7 34 7-47 181-214 (280)
263 2as0_A Hypothetical protein PH 86.2 0.58 2E-05 53.6 5.2 42 689-730 217-258 (396)
264 1wxx_A TT1595, hypothetical pr 86.0 0.48 1.7E-05 54.1 4.4 41 689-730 209-249 (382)
265 3g1p_A Protein PHNP; C-P lyase 85.9 0.31 1E-05 52.3 2.5 44 2-47 150-193 (258)
266 1fp1_D Isoliquiritigenin 2'-O- 85.9 0.57 1.9E-05 53.1 4.8 36 689-725 209-245 (372)
267 2aot_A HMT, histamine N-methyl 85.4 0.57 2E-05 51.0 4.4 42 690-731 53-101 (292)
268 2qm3_A Predicted methyltransfe 84.4 0.64 2.2E-05 52.9 4.3 41 690-731 173-214 (373)
269 3k0b_A Predicted N6-adenine-sp 83.8 0.93 3.2E-05 52.2 5.4 56 675-730 187-281 (393)
270 2p41_A Type II methyltransfera 83.7 0.84 2.9E-05 50.7 4.8 29 690-720 83-111 (305)
271 3frh_A 16S rRNA methylase; met 83.6 1.4 4.6E-05 47.7 6.1 84 639-731 62-145 (253)
272 1zg3_A Isoflavanone 4'-O-methy 83.5 0.62 2.1E-05 52.4 3.7 32 689-720 193-225 (358)
273 3ldu_A Putative methylase; str 83.4 0.94 3.2E-05 52.0 5.2 55 676-730 182-275 (385)
274 1zkp_A Hypothetical protein BA 82.7 1.3 4.3E-05 47.5 5.6 41 2-47 165-205 (268)
275 2qfm_A Spermine synthase; sper 81.9 1.1 3.8E-05 51.0 4.9 43 689-731 188-230 (364)
276 4a6d_A Hydroxyindole O-methylt 81.7 1.4 4.8E-05 49.7 5.7 40 688-728 178-218 (353)
277 3rpc_A Possible metal-dependen 81.4 2.2 7.4E-05 45.8 6.8 56 228-284 202-264 (264)
278 3lst_A CALO1 methyltransferase 81.1 1.3 4.3E-05 49.7 5.1 34 688-721 183-217 (348)
279 1wg8_A Predicted S-adenosylmet 80.4 1.5 5.2E-05 48.2 5.2 49 679-729 13-61 (285)
280 2wyl_A L-ascorbate-6-phosphate 80.4 2.2 7.4E-05 48.2 6.7 62 228-289 257-328 (360)
281 2cbn_A Ribonuclease Z; phospho 80.0 0.65 2.2E-05 50.7 2.1 36 7-47 204-239 (306)
282 3ldg_A Putative uncharacterize 80.0 1.6 5.5E-05 50.0 5.5 56 675-730 180-274 (384)
283 1g60_A Adenine-specific methyl 79.8 2 7E-05 46.2 6.0 52 679-733 204-255 (260)
284 3v97_A Ribosomal RNA large sub 79.3 1.5 5.1E-05 54.3 5.3 40 690-729 540-579 (703)
285 3lcv_B Sisomicin-gentamicin re 78.9 0.72 2.5E-05 50.4 2.0 43 689-731 132-175 (281)
286 1af7_A Chemotaxis receptor met 78.5 0.98 3.3E-05 49.5 2.9 41 690-730 106-155 (274)
287 1y44_A Ribonuclease Z; zinc-de 77.9 0.81 2.8E-05 50.3 2.1 36 7-47 202-237 (320)
288 1i4w_A Mitochondrial replicati 76.9 2.8 9.6E-05 47.6 6.2 36 690-725 59-95 (353)
289 3bv6_A Metal-dependent hydrola 76.4 2.9 9.8E-05 47.6 6.2 61 228-288 282-352 (379)
290 2okc_A Type I restriction enzy 76.1 1.6 5.6E-05 50.8 4.1 62 662-729 150-225 (445)
291 3axs_A Probable N(2),N(2)-dime 70.3 3.7 0.00013 47.2 5.2 40 690-729 53-94 (392)
292 1zkp_A Hypothetical protein BA 70.0 5.2 0.00018 42.6 6.0 56 228-283 211-267 (268)
293 3cvo_A Methyltransferase-like 70.0 3.4 0.00012 43.2 4.3 40 689-730 30-69 (202)
294 3sso_A Methyltransferase; macr 69.8 3.9 0.00013 47.3 5.1 34 690-723 217-258 (419)
295 3jxp_A Coenzyme PQQ synthesis 67.8 0.99 3.4E-05 50.4 -0.3 41 2-46 185-227 (321)
296 1vjn_A Zn-dependent hydrolase 65.4 6.2 0.00021 41.3 5.3 39 2-43 109-147 (220)
297 2e7y_A TRNAse Z; tRNA maturati 63.7 13 0.00043 39.5 7.5 58 227-284 219-280 (280)
298 3v97_A Ribosomal RNA large sub 60.8 7.4 0.00025 48.1 5.5 56 675-730 176-274 (703)
299 1y44_A Ribonuclease Z; zinc-de 57.7 19 0.00066 39.2 7.7 60 227-287 244-307 (320)
300 3kl7_A Putative metal-dependen 57.3 23 0.0008 37.1 8.0 36 2-43 148-183 (235)
301 4gqb_A Protein arginine N-meth 56.1 7.2 0.00025 47.6 4.2 34 690-723 358-396 (637)
302 3s1s_A Restriction endonucleas 55.8 13 0.00044 46.6 6.4 40 690-729 322-365 (878)
303 3ua3_A Protein arginine N-meth 51.5 14 0.00049 45.4 5.8 36 690-725 410-459 (745)
304 2cbn_A Ribonuclease Z; phospho 51.1 23 0.00078 38.2 6.9 57 227-284 246-306 (306)
305 2ar0_A M.ecoki, type I restric 50.5 10 0.00034 45.4 4.2 62 662-729 148-228 (541)
306 3zwf_A Zinc phosphodiesterase 48.5 18 0.0006 41.0 5.6 36 8-47 243-279 (368)
307 3md7_A Beta-lactamase-like; ss 48.1 25 0.00085 38.0 6.6 56 227-285 237-292 (293)
308 3khk_A Type I restriction-modi 47.3 16 0.00056 43.6 5.3 76 641-729 209-300 (544)
309 2bib_A CBPE, teichoic acid pho 46.2 8.3 0.00028 45.9 2.6 83 2-106 189-280 (547)
310 4auk_A Ribosomal RNA large sub 45.8 15 0.00051 41.9 4.4 32 690-722 212-243 (375)
311 3evf_A RNA-directed RNA polyme 45.0 17 0.00059 39.7 4.5 42 677-719 63-105 (277)
312 1ej0_A FTSJ; methyltransferase 43.9 19 0.00066 34.4 4.4 65 31-95 85-154 (180)
313 2xyq_A Putative 2'-O-methyl tr 42.6 17 0.00059 39.9 4.2 32 690-723 64-103 (290)
314 3zwf_A Zinc phosphodiesterase 41.1 26 0.00089 39.6 5.5 61 228-288 287-361 (368)
315 3md7_A Beta-lactamase-like; ss 40.8 16 0.00056 39.5 3.7 33 10-46 203-235 (293)
316 3lkd_A Type I restriction-modi 39.9 20 0.00067 43.0 4.4 66 662-729 196-265 (542)
317 2py6_A Methyltransferase FKBM; 38.4 22 0.00074 40.9 4.3 39 689-727 226-267 (409)
318 3tka_A Ribosomal RNA small sub 37.3 26 0.0009 39.5 4.6 49 679-728 48-98 (347)
319 4f3n_A Uncharacterized ACR, CO 36.1 38 0.0013 39.4 5.8 43 683-725 131-179 (432)
320 3lkz_A Non-structural protein 35.6 21 0.00072 39.5 3.3 33 691-723 96-129 (321)
321 3p8z_A Mtase, non-structural p 34.1 25 0.00086 37.8 3.6 34 690-723 79-113 (267)
322 2wk1_A NOVP; transferase, O-me 33.4 71 0.0024 34.9 7.2 53 672-724 89-147 (282)
323 3gcz_A Polyprotein; flavivirus 31.9 37 0.0013 37.2 4.6 43 677-720 79-122 (282)
324 3bv6_A Metal-dependent hydrola 30.0 48 0.0016 37.4 5.3 38 2-43 237-275 (379)
325 2qy6_A UPF0209 protein YFCK; s 29.6 24 0.00083 37.9 2.6 34 690-723 61-107 (257)
326 1zkd_A DUF185; NESG, RPR58, st 29.5 57 0.002 37.3 5.8 35 691-725 82-124 (387)
327 1boo_A Protein (N-4 cytosine-s 29.3 48 0.0016 36.6 5.1 53 679-734 244-296 (323)
328 2p4z_A Metal-dependent hydrola 28.3 48 0.0016 35.8 4.8 50 232-284 235-284 (284)
329 1eg2_A Modification methylase 27.4 64 0.0022 35.7 5.7 52 679-733 234-288 (319)
330 2wyl_A L-ascorbate-6-phosphate 27.0 58 0.002 36.3 5.3 38 2-43 212-250 (360)
331 3llv_A Exopolyphosphatase-rela 26.7 45 0.0015 31.4 3.8 33 691-725 7-42 (141)
332 2nyu_A Putative ribosomal RNA 26.3 44 0.0015 33.0 3.8 62 33-95 96-163 (196)
333 4fzv_A Putative methyltransfer 24.9 50 0.0017 37.4 4.2 47 679-725 138-185 (359)
334 2hwk_A Helicase NSP2; rossman 24.7 26 0.00088 38.5 1.7 63 33-95 205-274 (320)
335 3dou_A Ribosomal RNA large sub 24.0 48 0.0016 33.5 3.5 62 34-95 91-157 (191)
336 3eld_A Methyltransferase; flav 23.2 76 0.0026 35.0 5.1 42 677-719 70-112 (300)
337 3dl0_A Adenylate kinase; phosp 23.1 24 0.00083 35.9 1.1 24 696-719 9-32 (216)
338 3o4f_A Spermidine synthase; am 22.9 78 0.0027 34.8 5.2 46 685-730 79-125 (294)
339 3fwz_A Inner membrane protein 22.8 61 0.0021 30.7 3.9 36 691-728 8-46 (140)
340 3h3e_A Uncharacterized protein 22.0 2E+02 0.0067 31.0 8.1 93 182-285 171-266 (267)
341 3kl7_A Putative metal-dependen 21.5 52 0.0018 34.4 3.3 48 226-274 183-230 (235)
342 3njr_A Precorrin-6Y methylase; 21.0 1.5E+02 0.0052 29.9 6.7 49 34-93 122-170 (204)
343 3sr0_A Adenylate kinase; phosp 20.9 37 0.0012 35.2 1.9 22 697-718 10-31 (206)
344 2oxt_A Nucleoside-2'-O-methylt 20.8 1.7E+02 0.0057 31.3 7.2 59 31-92 137-199 (265)
345 3hm2_A Precorrin-6Y C5,15-meth 20.2 1.3E+02 0.0045 28.8 5.8 51 33-93 93-143 (178)
346 2iyv_A Shikimate kinase, SK; t 20.2 26 0.00091 34.5 0.6 24 696-719 11-34 (184)
347 2pbr_A DTMP kinase, thymidylat 20.1 42 0.0014 33.0 2.1 25 696-720 9-36 (195)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=1.9e-52 Score=491.13 Aligned_cols=278 Identities=27% Similarity=0.435 Sum_probs=254.8
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCCeEEEeecch
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFAL 80 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG~VLIPvFAl 80 (1101)
+|+|+.++++|+||||++..+++++.... ...++|+||+|||||++.|+++..++.+|.+.|.+++++||+||||+||+
T Consensus 147 ~~~i~~~~~~ilfsGD~~~~~~~~l~~~~-~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa~ 225 (431)
T 3iek_A 147 FVVAQGEGRTLVYSGDLGNREKDVLPDPS-LPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAV 225 (431)
T ss_dssp EEEEEETTEEEEECCCCCCTTSSSSCCCC-BCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred EEEEEECCEEEEEeCCCCCCCCcccCCcc-ccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 57899999999999999998887774333 23589999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhh-cCCCcCCCccccC-----ccccCCC
Q psy9966 81 GRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQ-RNMFDFKHIRPFD-----KSFIDNP 154 (1101)
Q Consensus 81 GRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~-~npF~fk~i~~~~-----~~~~~~~ 154 (1101)
||+|||+.+|+++|++. .++|||++|||+.+++++|+.|.+||++++++.+.. .|||.|++++.+. +.+.+.+
T Consensus 226 gR~qell~~l~~~~~~~-~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~ 304 (431)
T 3iek_A 226 ERAQEILYVLYTHGHRL-PRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAP 304 (431)
T ss_dssp THHHHHHHHHHHHGGGS-CCCCEEEECHHHHHHHHHGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHhc-cCCCEEEeChHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCC
Confidence 99999999999999873 479999999999999999999999999999887754 7999999987764 2245568
Q ss_pred CCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcchhhhhcCcceEEecCCeeEEEeeEEEEE-ecccCCCH
Q psy9966 155 GPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYM-SFSAHADA 233 (1101)
Q Consensus 155 gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~~g~~i~v~~~V~~i-~fSaHAD~ 233 (1101)
+||||||+||||++|+++++|++|++|++|+|||||||++||+|++|++|++++++. |+.++++|+|+++ +||||||+
T Consensus 305 ~p~viia~~gm~~~G~~~~~l~~~~~~~~n~ii~~gyq~~gt~g~~l~~~~~~v~~~-g~~~~v~a~v~~~~~~saHad~ 383 (431)
T 3iek_A 305 GPMVVLAGSGMLAGGRILHHLKHGLSDPRNALVFVGYQPQGGLGAEIIARPPAVRIL-GEEVPLRASVHTLGGFSGHAGQ 383 (431)
T ss_dssp SSEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHHTCCSEEEET-TEEEECCSEEEECGGGCSSCCH
T ss_pred CCeEEEecCCCCCCChHHHHHHHhcCCCCCeEEEECCCCCCChHHHhhcCCcEEEEC-CEEEEEEEEEEEECCccccCCH
Confidence 999999999999999999999999999999999999999999999999999999987 7899999999999 79999999
Q ss_pred HHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 234 KGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 234 ~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
+||++|++..+ +||+||||++++..|+++|.++++ ++++|++||++++
T Consensus 384 ~~l~~~~~~~~--~v~lvHge~~~~~~l~~~l~~~~~-~~~~p~~~~~~~~ 431 (431)
T 3iek_A 384 DELLDWLQGEP--RVVLVHGEEEKLLALGKLLALRGQ-EVSLARFGEGVPV 431 (431)
T ss_dssp HHHHHHHTTCS--EEEEESSCHHHHHHHHHHHHHTTC-EEEECCTTCCEEC
T ss_pred HHHHHHHHhCC--eEEEECCCHHHHHHHHHHHHHhCC-cEEECCCCCEEeC
Confidence 99999999774 999999999999999999998866 9999999999874
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=3.2e-50 Score=475.57 Aligned_cols=287 Identities=40% Similarity=0.722 Sum_probs=228.8
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCCeEEEeecch
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFAL 80 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG~VLIPvFAl 80 (1101)
+|+|+.++++|+||||++..++.++.++.++..++|+||+|||||.+.|+++.+++.+|.+.|++++++||+|+||+||+
T Consensus 164 ~~~i~~~~~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~ 243 (459)
T 2i7t_A 164 MFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243 (459)
T ss_dssp EEEEEETTEEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred EEEEEECCcEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEEecch
Confidence 58899999999999999998888776666667799999999999999998999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcC--CCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccCc-cccCCCCCe
Q psy9966 81 GRAQELCILLETYWERMN--LQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDK-SFIDNPGPM 157 (1101)
Q Consensus 81 GRaQELl~iL~~~w~~~~--~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~~-~~~~~~gp~ 157 (1101)
||+|||+++|+++|++++ ..+|||++|+|+.+++++|+.+.+||++++++.+..+|||.|++++.... +.....+||
T Consensus 244 gr~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 323 (459)
T 2i7t_A 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPS 323 (459)
T ss_dssp SSHHHHHHHHHHHHHHCGGGTTSCEEEC---------------------------------CCSEEECCCTTSSCCCSSE
T ss_pred hHHHHHHHHHHHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCe
Confidence 999999999999998753 37999999999999999999999999999988887789999998876542 113457899
Q ss_pred EEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcchhhhhcCcceEEecCCeeEEEeeEEEEEecccCCCHHHHH
Q psy9966 158 VVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADAKGIM 237 (1101)
Q Consensus 158 VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~~g~~i~v~~~V~~i~fSaHAD~~~l~ 237 (1101)
||||+||||++|+++++|++|++|++|+||||||+++||+|++|++|++.+....|+.++++|+|++++||+|||+.+|+
T Consensus 324 viia~~gm~~~g~~~~~l~~~~~~~~~~ii~~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~ 403 (459)
T 2i7t_A 324 VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTS 403 (459)
T ss_dssp EEEESCTTCSSHHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHH
T ss_pred EEEEcCcccCCCHHHHHHHHHcCCCCCeEEEEecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999998875457899999999999999999999999
Q ss_pred HHHHHhCCCEEEEecCChhHHHHHHHHHHHHcC------CceeecCCCCEEEEecC
Q psy9966 238 QLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFN------LDCFMPANGESCFVQTD 287 (1101)
Q Consensus 238 ~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~g------i~v~~P~nGe~v~l~~~ 287 (1101)
+||+.++|++||+||||+..+..|++.|.++++ +++++|+|||+++|.++
T Consensus 404 ~~i~~~~p~~v~~vHGe~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 459 (459)
T 2i7t_A 404 EFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFR 459 (459)
T ss_dssp HHHHHHCCSEEEEESSCHHHHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEEC
T ss_pred HHHHhcCCCeEEEeCCCHHHHHHHHHHHHHHhccccccCceEEeCCCCCEEEEEeC
Confidence 999999999999999999999999999999884 89999999999999864
No 3
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=2.2e-43 Score=433.63 Aligned_cols=283 Identities=30% Similarity=0.538 Sum_probs=253.1
Q ss_pred CEEEEECCE--EEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhCCCeEEEe
Q psy9966 1 MFQVKVGNQ--SIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTI--RDSKRCRERDFLKKVHECVDRGGKVLIP 76 (1101)
Q Consensus 1 Mf~Ie~~g~--rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~--~~~r~~rE~~f~~~I~etl~~GG~VLIP 76 (1101)
+|.|+.+++ +|+||||++..+++++.++..+..++|+||+||||+++. |+++...+.+|.+.|.+++++||+||||
T Consensus 350 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp 429 (651)
T 3af5_A 350 IVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIP 429 (651)
T ss_dssp EEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 478888888 999999999988888865544456899999999999987 8888889999999999999999999999
Q ss_pred ecchhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhh--hcCCCcCCCccccCc-----c
Q psy9966 77 VFALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFV--QRNMFDFKHIRPFDK-----S 149 (1101)
Q Consensus 77 vFAlGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~--~~npF~fk~i~~~~~-----~ 149 (1101)
+||+||+|||+.+|+++|+++.+.+|||+++ ++.+++.+|..+.+||+..+++.+. ..+||.|+++...+. .
T Consensus 430 ~favgR~qell~~l~~~~~~~~l~~~I~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~v~~~~~~~~ 508 (651)
T 3af5_A 430 AMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQD 508 (651)
T ss_dssp CCTTTHHHHHHHHHHHHHTTTCCCSCEEEES-SHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEECCSHHHHHH
T ss_pred ccCccHHHHHHHHHHHhhhhcCCCCcEEEec-hHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCceEEcCCHHHHHH
Confidence 9999999999999999998766568999975 9999999999999999999887663 368998877766541 1
Q ss_pred ccCCCCCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcchhhhhcCcceEEec--CCe--eEEEeeEEEEE
Q psy9966 150 FIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFE--NKQ--IIDVKMAIEYM 225 (1101)
Q Consensus 150 ~~~~~gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~--~g~--~i~v~~~V~~i 225 (1101)
+...++|+||||+||||++|+++++|++|++|++|+||||||+++||+|++|.+|.+++++. .|. .++++|+|+.+
T Consensus 509 ~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i 588 (651)
T 3af5_A 509 IIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTI 588 (651)
T ss_dssp HHHSCSCEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEEC
T ss_pred HhcCCCCEEEEECCCCCCCCHHHHHHHHHhCCCCCEEEEeCCCCCCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEc
Confidence 22347899999999999999999999999999999999999999999999999998887752 255 78899999999
Q ss_pred e-cccCCCHHHHHHHHHHhC--CCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 226 S-FSAHADAKGIMQLIQYCE--PKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 226 ~-fSaHAD~~~l~~~I~~l~--Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
+ ||||||+++|++|++.++ |++||+||||++.+..|++.+.+++|+++++|+|||+++|
T Consensus 589 ~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~la~~~~~~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 589 DGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGISTRAPNNLDTIRL 650 (651)
T ss_dssp GGGCSSCCHHHHHHHHHHCBSCCSEEEEESSCHHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred CcccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHHHHHHHHHHHHHhcCCeEEECCCCCEEEe
Confidence 8 999999999999999999 9999999999999999999888889999999999999976
No 4
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=1.1e-42 Score=426.53 Aligned_cols=283 Identities=27% Similarity=0.496 Sum_probs=236.0
Q ss_pred CEEEEECCE--EEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhCCCeEEEe
Q psy9966 1 MFQVKVGNQ--SIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTI--RDSKRCRERDFLKKVHECVDRGGKVLIP 76 (1101)
Q Consensus 1 Mf~Ie~~g~--rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~--~~~r~~rE~~f~~~I~etl~~GG~VLIP 76 (1101)
+|+|+.+++ +|+||||++..+++++.++..+..++|+||+|||||++. |+++.+.+.+|.+.|..++++||+|+||
T Consensus 338 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp 417 (640)
T 2xr1_A 338 ISHFHIGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIP 417 (640)
T ss_dssp EEEEEETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEE
T ss_pred EEEEEECCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 478888888 999999999988888875544556899999999999987 8888889999999999999999999999
Q ss_pred ecchhHHHHHHHHHHHHHHhcCC-CccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhh--hcCCCcCCCccccCc-----
Q psy9966 77 VFALGRAQELCILLETYWERMNL-QAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFV--QRNMFDFKHIRPFDK----- 148 (1101)
Q Consensus 77 vFAlGRaQELl~iL~~~w~~~~~-~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~--~~npF~fk~i~~~~~----- 148 (1101)
+||+||+||++.+|+++|++..+ ++|||+++ ++.+++.+|..+.+||+..+++.+. ..+||.|+++...+.
T Consensus 418 ~favGR~qell~~l~~~~~~~~~~~~~V~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 496 (640)
T 2xr1_A 418 AFAVGRSQEVMIVLEESIRKGLIPEVPVYLDG-MIWEATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEARQ 496 (640)
T ss_dssp CCTTTHHHHHHHHHHHHHHHTSSCCCCEEEES-SHHHHHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHHH
T ss_pred ecccchHHHHHHHHHHHHHhCCCCCCcEEEEh-HHHHHHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHHH
Confidence 99999999999999999986543 68999975 9999999999999999999877653 368998877765541
Q ss_pred cccCCCCCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcchhhhhcCcceEEec--CCe--eEEEeeEEEE
Q psy9966 149 SFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFE--NKQ--IIDVKMAIEY 224 (1101)
Q Consensus 149 ~~~~~~gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~--~g~--~i~v~~~V~~ 224 (1101)
++...++|+|||||+|||++|+++++|++|++|++|+||||||+++||+|++|.+|.+++++. .|. .++++|+|+.
T Consensus 497 ~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~ 576 (640)
T 2xr1_A 497 KIIQNPQPCVILATSGMMNGGPVMEYFKAFAEDPRNTLVFVGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQV 576 (640)
T ss_dssp HC----CCCEEEESCTTSSSSHHHHHHHHHSSCTTCEEEECSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEE
T ss_pred HHhcCCCCeEEEeCCCccCCChHHHHHHHhhCCCCCEEEEecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEE
Confidence 122347899999999999999999999999999999999999999999999999998877642 245 6788999999
Q ss_pred Ee-cccCCCHHHHHHHHHHhC--CCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 225 MS-FSAHADAKGIMQLIQYCE--PKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 225 i~-fSaHAD~~~l~~~I~~l~--Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
++ ||||||++++++|++.++ |++||+||||++.+..|++.+.+++|+++++|+|||+++|
T Consensus 577 i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 577 VDGFSGHSDRRQLMEYVKRMQPRPERVFTEHGDEKACVDLASSVYKKLKIETRALTNLETVRL 639 (640)
T ss_dssp CCCCSCSCCHHHHHHHHHTCBSCCSEEEEESSCHHHHHHHHHHHHHHHCCEEEECCTTCEEEC
T ss_pred EccccccCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcCCeEEeCCCCCEEEe
Confidence 98 999999999999999998 9999999999999999999998889999999999999976
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=7.2e-42 Score=419.29 Aligned_cols=282 Identities=29% Similarity=0.522 Sum_probs=250.8
Q ss_pred CEEEEECCE--EEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhCCCeEEEe
Q psy9966 1 MFQVKVGNQ--SIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTI--RDSKRCRERDFLKKVHECVDRGGKVLIP 76 (1101)
Q Consensus 1 Mf~Ie~~g~--rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~--~~~r~~rE~~f~~~I~etl~~GG~VLIP 76 (1101)
+|+|+.+++ +|+||||++..+++++.++.....++|+||+|||||.+. |+++...+.+|.+.|.+++++||+||||
T Consensus 335 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp 414 (636)
T 2ycb_A 335 MAHLHIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIP 414 (636)
T ss_dssp EEEEEETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 478888888 999999999988888876544556899999999999987 8888889999999999999999999999
Q ss_pred ecchhHHHHHHHHHHHHHHhcCC-CccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhh--hcCCCcCCCccccC-----c
Q psy9966 77 VFALGRAQELCILLETYWERMNL-QAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFV--QRNMFDFKHIRPFD-----K 148 (1101)
Q Consensus 77 vFAlGRaQELl~iL~~~w~~~~~-~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~--~~npF~fk~i~~~~-----~ 148 (1101)
+||+||+|||+.+|+++|++..+ ++|||++ +++.+++.+|..+.+||+..+++.+. ..+||.|+++...+ +
T Consensus 415 ~fa~GR~qell~~l~~~~~~~~~~~~~V~~d-g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 493 (636)
T 2ycb_A 415 VFAVGRAQELMIVLEEYIRTGIIDEVPVYID-GMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERR 493 (636)
T ss_dssp CCTTTHHHHHHHHHHHHHHTTSSCCCCEEEE-HHHHHHHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHHH
T ss_pred ECCCcHHHHHHHHHHHHHHhCCCCCCeEEEe-hHHHHHHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHHH
Confidence 99999999999999999986443 6899996 69999999999999999998877653 36899887766543 1
Q ss_pred cccCCCCCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcchhhhhcCcceEEec--CCe--eEEEeeEEEE
Q psy9966 149 SFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTIGHKVLSGVKKLEFE--NKQ--IIDVKMAIEY 224 (1101)
Q Consensus 149 ~~~~~~gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~--~g~--~i~v~~~V~~ 224 (1101)
++ ..++|+|||||+|||++|+++++|++|+++++|+||||||+++||+|++|.+|..++++. .|. .++++|+|+.
T Consensus 494 ~l-~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~ 572 (636)
T 2ycb_A 494 EI-VEGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKT 572 (636)
T ss_dssp HH-HHSSSCEEEESCSSSSSHHHHHHHHHHTTCTTSEEEECSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEE
T ss_pred Hh-ccCCCEEEEecCCccCCChHHHHHHHHhCCCCCEEEEecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEE
Confidence 12 236899999999999999999999999999999999999999999999999998887753 355 7889999999
Q ss_pred Ee-cccCCCHHHHHHHHHHhC--CCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 225 MS-FSAHADAKGIMQLIQYCE--PKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 225 i~-fSaHAD~~~l~~~I~~l~--Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
++ ||||||+++|++||+.++ |++||+||||++.+..|++.+.+++|+++++|+|||+++|
T Consensus 573 i~~~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~~~~~~a~~~~~~~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 573 IEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSCCSSCCHHHHHHHHHSCSSCCSEEEEESSCHHHHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred ECCcceeCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEeCCCCCEEEe
Confidence 98 999999999999999999 9999999999999999999888889999999999999976
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.97 E-value=1.7e-31 Score=330.25 Aligned_cols=200 Identities=23% Similarity=0.320 Sum_probs=169.0
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCCCccc---------CCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCC
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLGAAWI---------DKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGG 71 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~~a~i---------p~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG 71 (1101)
+|.|+.++++|+||||++..+++++.++.+ ...++|+||+|||||.+.|+++ ++..+|.+.|.+++++||
T Consensus 164 ~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h~~~-~~~~~l~~~i~~~l~~~G 242 (717)
T 2i7x_A 164 IWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFK-KRSKIFKDTLKKGLSSDG 242 (717)
T ss_dssp EEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCHH-HHHHHHHHHHHHHTSTTC
T ss_pred EEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHhCCC
Confidence 478999999999999999988888765432 1358999999999999988765 466699999999999999
Q ss_pred eEEEeecchhHHHHHHHHHHHHH-H--hcC--CCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhc---CCCc-CCC
Q psy9966 72 KVLIPVFALGRAQELCILLETYW-E--RMN--LQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQR---NMFD-FKH 142 (1101)
Q Consensus 72 ~VLIPvFAlGRaQELl~iL~~~w-~--~~~--~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~---npF~-fk~ 142 (1101)
+||||+||+||+|||+.+|.++| + +.+ .++|||++++++.+++++|+.+.+||++.+++.|..+ +||. |++
T Consensus 243 ~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~ 322 (717)
T 2i7x_A 243 SVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSR 322 (717)
T ss_dssp EEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTT
T ss_pred eEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCcccccc
Confidence 99999999999999999999998 3 222 3689999999999999999999999999988777653 4999 788
Q ss_pred ccccC-ccccCCCCCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccC-CCcchhhhhcC
Q psy9966 143 IRPFD-KSFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCV-QGTIGHKVLSG 204 (1101)
Q Consensus 143 i~~~~-~~~~~~~gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~-~GT~g~~Ll~g 204 (1101)
++..+ +++...++|+||+||+ ++|+++++|++|++|++|+||||||++ +||+|++|+++
T Consensus 323 l~~~~~~~l~~~~~p~VI~aSG---~gG~~~~~L~~~a~~~~n~VIf~g~~~p~gTlgr~l~~~ 383 (717)
T 2i7x_A 323 IKIIAPNELSKYPGSKICFVSE---VGALINEVIIKVGNSEKTTLILTKPSFECASSLDKILEI 383 (717)
T ss_dssp EEECCGGGGGGCCSCEEEEEES---CHHHHHHHHHHHSSCTTEEEEECSSCCTTCHHHHHHHHH
T ss_pred CccCCHHHHhhCCCCEEEEECC---CCHHHHHHHHHHcCCCcCEEEEEcCCCCCCChHHHHHhh
Confidence 76533 3345557899888765 899999999999999999999999999 69999999863
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.95 E-value=3.8e-28 Score=293.09 Aligned_cols=252 Identities=16% Similarity=0.208 Sum_probs=196.0
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCCCcccC------CCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhC-CCeE
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLGAAWID------KCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDR-GGKV 73 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip------~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~-GG~V 73 (1101)
+|.|+.++++|+||||+....++..+.++++ ..++|+||+||||+.+.+ +...|.++.+.+.+++++ +|+|
T Consensus 149 ~~~i~~~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~--~~~se~~v~~~i~~~~~~~~grv 226 (555)
T 3zq4_A 149 GIVVKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPE--FTMSERRVGESIHDIFRKVDGRI 226 (555)
T ss_dssp EEEEEETTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCS--CCCCHHHHHHHHHHHHHHCCSCE
T ss_pred EEEEEECCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCC--CCCCHHHHHHHHHHHHHhCCCEE
Confidence 4788999999999999999877765533322 257999999999999754 346788999999999975 9999
Q ss_pred EEeecc--hhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccCcccc
Q psy9966 74 LIPVFA--LGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFI 151 (1101)
Q Consensus 74 LIPvFA--lGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~~~~~ 151 (1101)
+||+|| +||+|+++.++.++ +.||++.++.+.+++++++.+ +|++. |-.. .+. . +++.
T Consensus 227 ii~~fasnv~R~q~il~~a~~~------gr~v~v~grs~~~~~~~~~~~-g~l~~----------p~~~-~v~-~-~~~~ 286 (555)
T 3zq4_A 227 IFATFASNIHRLQQVIEAAVQN------GRKVAVFGRSMESAIEIGQTL-GYINC----------PKNT-FIE-H-NEIN 286 (555)
T ss_dssp EEECCTTCHHHHHHHHHHHHTT------TCEEEEESHHHHHHHHHHHGG-GSCCC----------CGGG-EEC-G-GGTT
T ss_pred EEEEChhHHHHHHHHHHHHHHH------CCEEEEeCHHHHHHHHHHHHc-CCccC----------Cccc-EeC-H-HHHh
Confidence 999999 99999999999876 568999998999999998775 44421 1000 011 1 1222
Q ss_pred CC-CCCeEEEEcCCCCCCchHHHHHHHhCCCCCC--------eEEEecccCCCcchh--hhhcCcceEEecCCeeEEEee
Q psy9966 152 DN-PGPMVVFATPGMLHSGLSLIIFKKWAPVENN--------MLIMPGFCVQGTIGH--KVLSGVKKLEFENKQIIDVKM 220 (1101)
Q Consensus 152 ~~-~gp~VViaspGmL~~G~s~~~~~~w~~d~~N--------~VI~tGy~~~GT~g~--~Ll~g~k~i~l~~g~~i~v~~ 220 (1101)
.. +++.|+++|++ .|...++|.+++.++.+ +|||+||++||+.+. +++++ ..+..+
T Consensus 287 ~~~~~~~vii~tgs---qGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~----------l~~~g~ 353 (555)
T 3zq4_A 287 RMPANKVTILCTGS---QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQ----------LYRAGA 353 (555)
T ss_dssp TSCGGGEEEEECCT---TCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHH----------HHHTTC
T ss_pred hCCCCCEEEEeCCC---CchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHH----------HHHCCC
Confidence 22 34577777776 57778999999998776 999999999998843 22221 122234
Q ss_pred EEE-----EEecccCCCHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCC---ceeecCCCCEEEEecCc
Q psy9966 221 AIE-----YMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNL---DCFMPANGESCFVQTDM 288 (1101)
Q Consensus 221 ~V~-----~i~fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi---~v~~P~nGe~v~l~~~~ 288 (1101)
+|. .+++|||||++|++.|++.++|+++||||||++.+..+++ +.++.|+ ++++|+||+.++|..+.
T Consensus 354 ~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~-~a~~~G~~~~~~~~~~nG~~~~l~~~~ 428 (555)
T 3zq4_A 354 EVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVK-LATDCGIPEENCFIMDNGEVLALKGDE 428 (555)
T ss_dssp EEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHH-HHHHTTCCGGGBCCCCTTCEEEEETTE
T ss_pred EEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHH-HHHHcCCCcccEEEccCCCEEEEeCCC
Confidence 443 3899999999999999999999999999999999999996 7778888 79999999999997643
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.94 E-value=7.9e-26 Score=273.64 Aligned_cols=251 Identities=17% Similarity=0.232 Sum_probs=184.3
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCC-CcccC------CCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHh-CCCe
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLG-AAWID------KCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVD-RGGK 72 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~-~a~ip------~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~-~GG~ 72 (1101)
+|.|+.++++|+||||+...+++..+ +.++. ..++|+||+||||+.+.+. ...|..+.+.+.++++ .+|+
T Consensus 164 ~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g~--~~~e~~v~~~l~~~~~~~~gr 241 (562)
T 3bk2_A 164 GVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGY--TPSEMEIAKELDRVIGRAPGR 241 (562)
T ss_dssp EEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCSC--CCCHHHHHHHHHHHHHHCSSC
T ss_pred EEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCCC--CChHHHHHHHHHHHHHhCCCE
Confidence 47889999999999999998776653 22221 1479999999999975432 2356778778888875 7899
Q ss_pred EEEeecc--hhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccCccc
Q psy9966 73 VLIPVFA--LGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSF 150 (1101)
Q Consensus 73 VLIPvFA--lGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~~~~ 150 (1101)
|++|+|| +||+|+++.++.++ +.|||+.+....+++++|+.. +|++. .++|.- . +++
T Consensus 242 vii~~fas~~~r~q~il~~a~~~------~r~V~v~g~s~~~~~~~~~~~-g~l~~--------~~~~i~--~----~~~ 300 (562)
T 3bk2_A 242 VFVTTFASHIHRIQSVIWAAEKY------GRKVAMEGRSMLKFSRIALEL-GYLKV--------KDRLYT--L----EEV 300 (562)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHT------TCEEEEECHHHHHHHHHHHHT-TSCCC--------SSCCBC--T----GGG
T ss_pred EEEEEccccchHHHHHHHHHHHh------CCEEEEEChHHHHHHHHHHhc-CcccC--------CCCccC--H----HHH
Confidence 9999999 99999999998876 358888555556888888764 55542 233311 0 122
Q ss_pred cCC-CCCeEEEEcCCCCCCchHHHHHHHhCC--------CCCCeEEEecccCCCcchhh--hhcCcceEEecCCeeEEEe
Q psy9966 151 IDN-PGPMVVFATPGMLHSGLSLIIFKKWAP--------VENNMLIMPGFCVQGTIGHK--VLSGVKKLEFENKQIIDVK 219 (1101)
Q Consensus 151 ~~~-~gp~VViaspGmL~~G~s~~~~~~w~~--------d~~N~VI~tGy~~~GT~g~~--Ll~g~k~i~l~~g~~i~v~ 219 (1101)
... ++++|+++|++| |.....+.+|+. +++|+|||+||+++||.+.. +.+ ..++.+
T Consensus 301 ~~~~~~~~vi~~tg~~---ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~----------~l~~~g 367 (562)
T 3bk2_A 301 KDLPDHQVLILATGSQ---GQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVIN----------RLYALG 367 (562)
T ss_dssp TTSCGGGEEEEECCTT---SCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHH----------HHHHTT
T ss_pred hcCCCCCEEEEEcCCC---chhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcC----------ceeeCC
Confidence 222 345677777653 444445666653 88999999999999997642 111 111222
Q ss_pred eEE-----EEEecccCCCHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCC---ceeecCCCCEEEEecCc
Q psy9966 220 MAI-----EYMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNL---DCFMPANGESCFVQTDM 288 (1101)
Q Consensus 220 ~~V-----~~i~fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi---~v~~P~nGe~v~l~~~~ 288 (1101)
++| ..++||||||++++++|++.++|++||+||||++.+..+++ +.++.|+ ++++|+||++++|..+.
T Consensus 368 ~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~~~~~~-~~~~~g~~~~~~~~~~~G~~~~l~~~~ 443 (562)
T 3bk2_A 368 AYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKW-LAESMSRPPEKTLIGENGAVYRLTRET 443 (562)
T ss_dssp CEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCHHHHHHHHH-HHHTSSSCCSEECCCCTTEEEEECSSC
T ss_pred CEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcceEEECCCCCEEEEeCCC
Confidence 333 34789999999999999999999999999999999999996 5556787 69999999999998654
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.79 E-value=1.6e-19 Score=211.03 Aligned_cols=239 Identities=11% Similarity=0.127 Sum_probs=158.2
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCC--C-CcccCCCCCcEEEEcCCCCCCC------CCChhHHHHHHHHHHHHHHhC-C
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHL--G-AAWIDKCRPDLLITESTYATTI------RDSKRCRERDFLKKVHECVDR-G 70 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L--~-~a~ip~~~~DvLI~ESTYg~~~------~~~r~~rE~~f~~~I~etl~~-G 70 (1101)
+|.|+.++++|+||||+...+...- . -..+. .++|+||+||||+... +.+....+.++.+.+.+++++ +
T Consensus 174 ~~~i~~~~~~i~~tGD~~~~~~~~~~~~~~~~~~-~~~d~Li~Est~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~ 252 (429)
T 2az4_A 174 ALLIRTPDHFITYTGDLRLHGHNREETLAFCEKA-KHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHLVRLELENP 252 (429)
T ss_dssp EEEEEETTEEEEECCSCCSSSTTHHHHHHHHHHH-TTCSEEEEECCGGGSCCCCCCTTBCCCCSHHHHHHHHHHHHHTCS
T ss_pred EEEEEeCCcEEEECCCcccCCCchHHHHHHHHhc-cCCCEEEECCCCcCcccccccccCCCCCCHHHHHHHHHHHHHhCC
Confidence 3788999999999999997643210 0 01111 3899999999998732 112234577888888888775 5
Q ss_pred CeEEEeecc---hhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccC
Q psy9966 71 GKVLIPVFA---LGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFD 147 (1101)
Q Consensus 71 G~VLIPvFA---lGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~ 147 (1101)
|+++||.++ ++|+|++ +.++ +.|||++++++.+++++|....+++..... ....+ +.-..++
T Consensus 253 ~rlil~h~~~~~~~r~~~~---a~~~------gr~v~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~ 317 (429)
T 2az4_A 253 NRQITFNGYPANVERFAKI---IEKS------PRTVVLEANMAALLLEVFGIEVRYYYAESG----KIPEL--NPALEIP 317 (429)
T ss_dssp SSCEEEEECTTCHHHHHHH---HHHC------SSEEEEEHHHHHHHHHHHCCCCEEECSSSS----CCTTS--CGGGBCC
T ss_pred CcEEEEEeccchHHHHHHH---HHHh------CCEEEEEChhHHHHHhhccccCeeEecccc----ccccc--Cccceec
Confidence 669999988 8899888 3322 469999999988888876222122210000 00000 0000111
Q ss_pred -ccccCCCCCeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEEecccCCCcc---hhhhhcCcceEEecCCeeEEEeeEEE
Q psy9966 148 -KSFIDNPGPMVVFATPGMLHSGLSLIIFKKWAPVENNMLIMPGFCVQGTI---GHKVLSGVKKLEFENKQIIDVKMAIE 223 (1101)
Q Consensus 148 -~~~~~~~gp~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~tGy~~~GT~---g~~Ll~g~k~i~l~~g~~i~v~~~V~ 223 (1101)
+++...+++.|++ | .|. + .++ .++++||+++++.+|+. +.+++++ .+.++++|.
T Consensus 318 ~~~~~~~~~~~ii~----~--~~~--~--~~l--~~~~~vi~s~~~~~g~~~~~~~~~~~~----------~~~~~~~v~ 375 (429)
T 2az4_A 318 YDTLLKDKTDYLWQ----V--VNQ--F--DNL--QEGSLYIHSDAQPLGDFDPQYRVFLDL----------LAKKDITFV 375 (429)
T ss_dssp HHHHHHCSSSEEEE----C--CSC--G--GGS--CTTCEEEEESCSSCSTTSHHHHHHHHH----------HHHTTCEEE
T ss_pred HHHHhhCCCcEEEE----e--cCc--H--Hhh--CCCCEEEEeCCCCCcccchHHHHHHHH----------HHhCCCEEE
Confidence 2333445566555 2 333 1 133 34589999999999875 3444442 223446677
Q ss_pred EEecccCCCHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 224 YMSFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 224 ~i~fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
.+++|||||+++|+.|++.++|++||+||||.+.+.. ..+.++++|+||++++|
T Consensus 376 ~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~-------~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 376 RLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE-------NPYGERILPERGEQIVL 429 (429)
T ss_dssp ECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC-------CTTSEECCCCTTCEEEC
T ss_pred EEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh-------cCCCcEEEeCCCcEEeC
Confidence 8999999999999999999999999999999875443 34678999999999974
No 10
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.71 E-value=3.9e-17 Score=185.57 Aligned_cols=194 Identities=13% Similarity=0.194 Sum_probs=125.5
Q ss_pred CEEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCCC--CChhHHHHHHHHHHHHHHhCCCeEEEeec
Q psy9966 1 MFQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIR--DSKRCRERDFLKKVHECVDRGGKVLIPVF 78 (1101)
Q Consensus 1 Mf~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~~--~~r~~rE~~f~~~I~etl~~GG~VLIPvF 78 (1101)
||.|+.++++|+||||++..++....++.....++|+||+||||+.+.+ +++.+....+.+.|.++ .||+|+||+|
T Consensus 106 ~~~i~~~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~~~pse~~v~~~l~~~i~~~--~~g~vii~~f 183 (336)
T 3zdk_A 106 MFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRKH--PQHNIKIGLY 183 (336)
T ss_dssp EEEEEETTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTCCCCCHHHHHHHHHHHHHTC--TTSEEEEEEC
T ss_pred EEEEEeCCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCCCCCCHHHHHHHHHHHHHhC--CCCcEEEeec
Confidence 5889999999999999998765444332223568999999999999765 44444445555544432 3789999999
Q ss_pred chhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccCccccCCCCCeE
Q psy9966 79 ALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFIDNPGPMV 158 (1101)
Q Consensus 79 AlGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~~~~~~~~gp~V 158 (1101)
++||+|+++.++.++ +.+|++. +-. +..++.. ++. +.| .. +++. ..|
T Consensus 184 ~vgR~q~i~~~a~~~------grkV~v~-gr~---~~~~~~l-g~~-----------~~~-----~~-~~~~-----~~i 230 (336)
T 3zdk_A 184 SLGKESLLEQLALEF------QTWVVLS-PRR---LELVQLL-GLA-----------DVF-----TV-EEKA-----GRI 230 (336)
T ss_dssp SSSCHHHHHHHHHHH------TCCEECC-HHH---HHHHHHT-TCC-----------SCE-----ES-CGGG-----CSE
T ss_pred chHHHHHHHHHHHHc------CCEEEEE-hHH---HHHHHhc-CCc-----------ccc-----CC-HhHc-----CCC
Confidence 999999999999887 5789985 322 2222221 110 111 00 0000 112
Q ss_pred EEEcCCCCCCchHHHHHHHhCCCCCCeEEE--ecccCCCcchhhhhcCcceEEecCCeeEEEeeEEEEEecccCCCHHHH
Q psy9966 159 VFATPGMLHSGLSLIIFKKWAPVENNMLIM--PGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADAKGI 236 (1101)
Q Consensus 159 ViaspGmL~~G~s~~~~~~w~~d~~N~VI~--tGy~~~GT~g~~Ll~g~k~i~l~~g~~i~v~~~V~~i~fSaHAD~~~l 236 (1101)
-......+. ...+.+|+ +....|-+ ||+..+|.- .| +..+++|+|++++||
T Consensus 231 ~~~~~~~i~----~~al~r~~-~~~~~i~i~~S~~~ipg~~--------------~~--------~~~vh~S~Ha~~~EL 283 (336)
T 3zdk_A 231 HAVDHMEIC----HSNMLRWN-QTHPTIAILPTSRKIHSSH--------------PD--------IHVIPYSDHSSYSEL 283 (336)
T ss_dssp EEEEGGGCS----HHHHHHHH-HHSCEEEEEECSSCCCCSS--------------TT--------EEEECCCSSCBHHHH
T ss_pred CcchhheeH----HHHHHhhh-CcCCeEEEEeccccccCCc--------------cC--------ceeeEecCCCCHHHH
Confidence 222111111 34456776 43333333 565555521 01 356999999999999
Q ss_pred HHHHHHhCCCEEEEec-CChh
Q psy9966 237 MQLIQYCEPKNVLLVH-GEAS 256 (1101)
Q Consensus 237 ~~~I~~l~Pk~VILVH-Ge~~ 256 (1101)
+.|++.++|+++|+|| ||..
T Consensus 284 ~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 284 RAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp HHHHHHHCCSCEEESCTTSCC
T ss_pred HHHHHHhCCCEEEEEECCcCc
Confidence 9999999999999999 9974
No 11
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.66 E-value=7.7e-16 Score=176.95 Aligned_cols=224 Identities=13% Similarity=0.175 Sum_probs=140.2
Q ss_pred CEEEEE-CCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCCC--CCChhHHHHHHHHHHHHHHhCCCeEE--E
Q psy9966 1 MFQVKV-GNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTI--RDSKRCRERDFLKKVHECVDRGGKVL--I 75 (1101)
Q Consensus 1 Mf~Ie~-~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~~--~~~r~~rE~~f~~~I~etl~~GG~VL--I 75 (1101)
||+|+. +|.+|+||||++..++... +.++..++|+||+||||+.+. ++++.+.+.++++.+.++++++|+++ +
T Consensus 126 ~~~i~~~~g~~il~tGD~~~~~~~~~--~~l~~~~~D~Li~EsTy~~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~ 203 (367)
T 4b87_A 126 MILFYLPNGTVILHTGDFRADPSMER--SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVC 203 (367)
T ss_dssp EEEEECTTSCEEEECCSCCCCGGGGG--SGGGTSCCCEEEECCTTCSTTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEEEcCCCcEEEEecCcccCcccch--hhhccCCCCEEEEecccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 578887 5668999999998765432 345556899999999999975 46767777788898988888778764 7
Q ss_pred eecchhHHHHHHHHHHHHHHhcCCCccEEEeChHHHHHHHHHHHhHhhhhHHHHHhhhhcCCCcCCCccccCccccCCCC
Q psy9966 76 PVFALGRAQELCILLETYWERMNLQAPIYFAVGLTEKATNYYKMFITWTNQKIRKTFVQRNMFDFKHIRPFDKSFIDNPG 155 (1101)
Q Consensus 76 PvFAlGRaQELl~iL~~~w~~~~~~vPIy~~s~la~k~~~vy~~~~~~ln~~i~~~f~~~npF~fk~i~~~~~~~~~~~g 155 (1101)
|+|++||+|+++.+++++ +.+|++ ++...++++.+ ++ +++... +.. +...
T Consensus 204 ~a~~igr~q~ll~ia~~~------g~ki~v-~~~~~~il~~l----~~--~~~~~~--------------~t~---d~~~ 253 (367)
T 4b87_A 204 GTYSIGKEKVFLAIADVL------GSKVGM-SQEKYKTLQCL----NI--PEINSL--------------ITT---DMCS 253 (367)
T ss_dssp EESSSCCHHHHHHHHHHT------TCCEEC-CHHHHHHHHTT----CC--TTHHHH--------------EES---CGGG
T ss_pred ccchhHHHHHHHHHHHHh------CCEEEE-eHHHHHHHHhc----CC--chhhhh--------------ccc---CCcc
Confidence 889999999999999886 678998 44433333211 10 001110 000 0112
Q ss_pred CeEEEEcCCCCCCchHHHHHHHhCCCCCCeEEE--ecccCCCcchhhhhcCcceEEecCCeeEEEeeEEEEEecccCCCH
Q psy9966 156 PMVVFATPGMLHSGLSLIIFKKWAPVENNMLIM--PGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADA 233 (1101)
Q Consensus 156 p~VViaspGmL~~G~s~~~~~~w~~d~~N~VI~--tGy~~~GT~g~~Ll~g~k~i~l~~g~~i~v~~~V~~i~fSaHAD~ 233 (1101)
-.|-+.+.+.+....-.+++.+..++-...|-| |||.-.+.. ..+-+ +. +...-++.+..+++|.|+++
T Consensus 254 ~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~-~~~~~------~~--~~~~~~~~~~~vpySeHss~ 324 (367)
T 4b87_A 254 SLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKF-TRIAD------VI--PQTKGNISIYGIPYSEHSSY 324 (367)
T ss_dssp CSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC-----------CC------CC--CEEETTEEEEEECCCSSCCH
T ss_pred ceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCcccccCCCC-Ccccc------cc--cccCCceEEEEEeccCCCCH
Confidence 245566555554444445666555444444433 787543211 00000 00 00111346778999999999
Q ss_pred HHHHHHHHHhCCCEEEEecC--ChhHHHHHHHHH
Q psy9966 234 KGIMQLIQYCEPKNVLLVHG--EASKMVFLKEKI 265 (1101)
Q Consensus 234 ~~l~~~I~~l~Pk~VILVHG--e~~~m~~Lk~~L 265 (1101)
.||.+|+..++|++||++|+ .......+++.+
T Consensus 325 ~EL~~fv~~l~p~~iiptv~~~~~~~~~~m~~~~ 358 (367)
T 4b87_A 325 LEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYF 358 (367)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEECeecCCCHHHHHHHHHHH
Confidence 99999999999999999995 444444444433
No 12
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.70 E-value=0.0013 Score=71.77 Aligned_cols=44 Identities=11% Similarity=0.206 Sum_probs=36.1
Q ss_pred cCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
......|+|+|||.|+|++.|+.. +.+|+|||.++..+..|+++
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~ 70 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKK 70 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHH
T ss_pred CCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHH
Confidence 334568999999999999999954 68999999999877666543
No 13
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.57 E-value=0.0024 Score=71.09 Aligned_cols=69 Identities=20% Similarity=0.293 Sum_probs=40.2
Q ss_pred hhccCCCcchHHHH------HHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 661 KVSQLMSEKKSYEV------QVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 661 ~~~~~mn~KK~hEV------~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...-|+.+||..-- .....++.. +.......|+|+|||.|+|++.|+.. +.+|+|||.++..+..|+++
T Consensus 17 ~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~-l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~ 91 (295)
T 3gru_A 17 RGSHMFKPKKKLGQCFLIDKNFVNKAVES-ANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKL 91 (295)
T ss_dssp -------------CCEECCHHHHHHHHHH-TTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHH
T ss_pred hHhcCCCCccccCccccCCHHHHHHHHHh-cCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHH
Confidence 44556666665432 112223333 33334568999999999999999965 88999999999888766544
No 14
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.50 E-value=0.0022 Score=65.00 Aligned_cols=42 Identities=24% Similarity=0.243 Sum_probs=36.5
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|+++..||.. +.+|+|||.++..++.|+++.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~ 64 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRL 64 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHH
Confidence 458999999999999999966 999999999998887776544
No 15
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.45 E-value=0.0026 Score=68.97 Aligned_cols=52 Identities=6% Similarity=0.047 Sum_probs=39.2
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+++..+........|+|+|||.|+++..||. .|.+|+|||.++..++.|+++
T Consensus 58 ~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~-~G~~V~gvD~S~~~i~~a~~~ 109 (252)
T 2gb4_A 58 KHLDTFLKGQSGLRVFFPLCGKAIEMKWFAD-RGHTVVGVEISEIGIREFFAE 109 (252)
T ss_dssp HHHHHHHTTCCSCEEEETTCTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHH
T ss_pred HHHHHhccCCCCCeEEEeCCCCcHHHHHHHH-CCCeEEEEECCHHHHHHHHHh
Confidence 3444443222345899999999999999995 489999999999888776543
No 16
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.33 E-value=0.005 Score=61.45 Aligned_cols=45 Identities=20% Similarity=0.265 Sum_probs=37.3
Q ss_pred ccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 686 NSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 686 ~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.......|+|+|||.|+++..|+. .+.+|+|+|.++..++.|+.+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~ 76 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQN 76 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHH
Confidence 333456899999999999999997 889999999998877666543
No 17
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.29 E-value=0.0032 Score=65.47 Aligned_cols=51 Identities=10% Similarity=0.048 Sum_probs=39.4
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+++..+.-. ....|+|+|||.|+++..||.. |.+|+|||.++..++.|+++
T Consensus 13 ~~~~~l~~~-~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 13 QYWSSLNVV-PGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTE 63 (203)
T ss_dssp HHHHHHCCC-TTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHH
T ss_pred HHHHhcccC-CCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHH
Confidence 444444322 2458999999999999999964 88999999999888777554
No 18
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.25 E-value=0.004 Score=64.58 Aligned_cols=60 Identities=20% Similarity=0.209 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 671 SYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 671 ~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
..+.+.+..++..+........|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+.+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 92 (216)
T 3ofk_A 33 PFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQR 92 (216)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh
Confidence 4555667777777666555678999999999999999954 57999999998877666543
No 19
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.25 E-value=0.0049 Score=67.16 Aligned_cols=42 Identities=14% Similarity=0.204 Sum_probs=35.7
Q ss_pred CCeEEEEcCccchHhHHHHhc---CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ---HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~---~~~~V~~IE~~~~~~~gA~~r 731 (1101)
..+|+|+|||.|.++..||.. .|.+|+|||.++..++.|+++
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~ 115 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRH 115 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHH
Confidence 458999999999999999864 478999999999888777654
No 20
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.18 E-value=0.0067 Score=63.25 Aligned_cols=43 Identities=19% Similarity=0.351 Sum_probs=36.5
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..||.. +.+|+|||.++..++.|++.
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~ 96 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKN 96 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH
Confidence 34468999999999999999976 99999999999877666543
No 21
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.15 E-value=0.0064 Score=64.66 Aligned_cols=45 Identities=29% Similarity=0.404 Sum_probs=38.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.....|+|+|||.|+++..||..++.+|+|+|.++..++.|+++.
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~ 79 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRA 79 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHH
Confidence 345689999999999999999878999999999998776665443
No 22
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.13 E-value=0.0041 Score=66.40 Aligned_cols=42 Identities=7% Similarity=0.053 Sum_probs=36.1
Q ss_pred CeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.+|+|||||.|+.++.++...+.+|+|||.++...+.|+++.
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~ 103 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWA 103 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHG
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHH
Confidence 489999999999999999766779999999998877776544
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.03 E-value=0.0077 Score=62.65 Aligned_cols=45 Identities=24% Similarity=0.365 Sum_probs=36.8
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHHHHh
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.....|+|+|||.|+++..|+...+ .+|+|||.++..++.|+++.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~ 73 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRL 73 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHH
Confidence 3456999999999999999997543 79999999998777665543
No 24
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.03 E-value=0.0069 Score=63.54 Aligned_cols=53 Identities=23% Similarity=0.300 Sum_probs=40.9
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.++..+....+...|+|+|||.|+++..||.. .+.+|+|||.++..++.|++.
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 102 (221)
T 3u81_A 48 QIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQM 102 (221)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH
Confidence 34444444445679999999999999999974 478999999999877766543
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.03 E-value=0.0075 Score=64.90 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=37.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.++..|+..++.+|+|+|.++..++.|+.+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~ 103 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANAR 103 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence 34569999999999999999987899999999998877666543
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.01 E-value=0.0076 Score=60.52 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=36.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.++..++.....+|+|+|.++..++.|+++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~ 73 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDN 73 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHH
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH
Confidence 34568999999999999999976557999999999877666543
No 27
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.01 E-value=0.0071 Score=63.17 Aligned_cols=52 Identities=17% Similarity=0.270 Sum_probs=40.1
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..++.......|+|+|||.|+++..||... +.+|+|+|.++.....|+.+
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 102 (223)
T 3duw_A 49 FLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN 102 (223)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 34444433445699999999999999999764 78999999998877666543
No 28
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.00 E-value=0.0089 Score=63.99 Aligned_cols=53 Identities=13% Similarity=0.216 Sum_probs=40.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHHHHh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~~r~ 732 (1101)
..+..+........|+|+|||.|+++..|+.. | .+|+|||.++..++.|.+++
T Consensus 27 ~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 27 KALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC
T ss_pred HHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC
Confidence 45555544334568999999999999999965 6 59999999999887765543
No 29
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.99 E-value=0.0082 Score=62.43 Aligned_cols=43 Identities=30% Similarity=0.351 Sum_probs=35.9
Q ss_pred CCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+...+ .+|+|||.++..++.|+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~ 72 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQER 72 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHH
Confidence 456999999999999999997644 7999999998877666543
No 30
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=95.96 E-value=0.0087 Score=65.76 Aligned_cols=39 Identities=15% Similarity=0.206 Sum_probs=33.9
Q ss_pred eEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 692 HIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 692 ~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.|+|+|||.|.|++.|+. .+.+|+|||.++..+..|+++
T Consensus 49 ~VLEIG~G~G~lt~~L~~-~~~~V~avEid~~~~~~l~~~ 87 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE-AGAEVTAIEKDLRLRPVLEET 87 (271)
T ss_dssp CEEEECCTTSHHHHHHHH-TTCCEEEEESCGGGHHHHHHH
T ss_pred eEEEEeCchHHHHHHHHH-cCCEEEEEECCHHHHHHHHHh
Confidence 899999999999999995 468999999999887666543
No 31
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=95.93 E-value=0.011 Score=58.89 Aligned_cols=64 Identities=11% Similarity=0.161 Sum_probs=51.5
Q ss_pred hhccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccc-hHhHHHHhcCCCeEEEEeCCccccc
Q psy9966 661 KVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQG-YLSTILALQHGKKTLSLDYNQVNTH 726 (1101)
Q Consensus 661 ~~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkG-yLsr~La~~~~~~V~~IE~~~~~~~ 726 (1101)
+-+.|.-|.|.|=-+.++++++.-... ...|||+|+|.| +.+..||.+.|..|+++|.|+..+.
T Consensus 9 ~~~~~~~~~~~~m~e~LaeYI~~~~~~--~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 9 HHSSGLVPRGSHMWNDLAVYIIRCSGP--GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CCCCCCCCCCCHHHHHHHHHHHHHSCS--SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred cccCCcccchhhHHHHHHHHHHhcCCC--CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 345677777777788889988765533 348999999999 5999999779999999999987553
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.91 E-value=0.0084 Score=62.62 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=39.9
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..++.......|+|+|||.|+.+..||... +.+|+++|.++..++.|+++
T Consensus 55 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 108 (225)
T 3tr6_A 55 LLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEY 108 (225)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Confidence 44444433345689999999999999999763 78999999998877666543
No 33
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=95.89 E-value=0.0097 Score=61.46 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=36.8
Q ss_pred cCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
......|+|+|||.|+++..|+.. +.+|+|+|.++..++.|+++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~ 118 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRR 118 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHH
Confidence 344568999999999999999966 89999999998877666543
No 34
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=95.87 E-value=0.0096 Score=61.01 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhcc-CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 672 YEVQVMSQVVAAVTNS-CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 672 hEV~~~s~~v~~l~~~-~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+.+.+.+.+...... .....|+|+|||.|.++..|+... +.+|+|+|.++..++.|+.+
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~ 73 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRN 73 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH
Confidence 3444444444333322 445799999999999999999765 77999999999888776543
No 35
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=95.87 E-value=0.0087 Score=63.48 Aligned_cols=52 Identities=15% Similarity=0.242 Sum_probs=39.7
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..+....+...|+|+|||.|+++..||.. .+.+|+|||.++..+..|+++
T Consensus 62 ~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~ 114 (232)
T 3ntv_A 62 LIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQN 114 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 3333433334569999999999999999974 488999999998877666543
No 36
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.85 E-value=0.009 Score=60.15 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=35.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..++.....+|+|+|.++..++.|+.
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~ 85 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKE 85 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence 456899999999999998886556799999999887766654
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.85 E-value=0.0084 Score=65.94 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=38.0
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...+|+|+|||.|.++..|+..+|.+|+|||.++..++.|+++.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~ 115 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMF 115 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHH
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 45689999999999999999887899999999998777776544
No 38
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.83 E-value=0.0098 Score=59.36 Aligned_cols=51 Identities=12% Similarity=0.247 Sum_probs=39.5
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..+ .......|+|+|||.|+++..++..+ +.+|+|+|.++..++.|+.+
T Consensus 17 ~~~~~-~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~ 68 (178)
T 3hm2_A 17 AISAL-APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSN 68 (178)
T ss_dssp HHHHH-CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHH
T ss_pred HHHHh-cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 34443 33345689999999999999999775 78999999999877666543
No 39
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.82 E-value=0.0082 Score=62.29 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=35.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~ 730 (1101)
+...|+|+|||.|+.+..||... +.+|++||.++..++.|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~ 99 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARR 99 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 45689999999999999999663 7899999999887766544
No 40
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.82 E-value=0.0086 Score=64.30 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=41.7
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHHh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.++..++...+...|+|+|||.|+.+..||... +.+|+|||.++..++.|+++-
T Consensus 50 ~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~ 105 (242)
T 3r3h_A 50 QFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYW 105 (242)
T ss_dssp HHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 344444444456799999999999999999753 789999999998887776443
No 41
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=95.79 E-value=0.016 Score=69.96 Aligned_cols=60 Identities=20% Similarity=0.401 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhcc-CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 672 YEVQVMSQVVAAVTNS-CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 672 hEV~~~s~~v~~l~~~-~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
+.++.+......+... .....|+|+|||.|.|+..|| ..|..|+|||.++.+++-|+...
T Consensus 48 ~r~~~i~~~~~~~~~~~~~~~~vLDvGCG~G~~~~~la-~~ga~V~giD~~~~~i~~a~~~a 108 (569)
T 4azs_A 48 QRLDLITEQYDNLSRALGRPLNVLDLGCAQGFFSLSLA-SKGATIVGIDFQQENINVCRALA 108 (569)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCEEEEETCTTSHHHHHHH-HTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCeEEEECCCCcHHHHHHH-hCCCEEEEECCCHHHHHHHHHHH
Confidence 3344444444444322 123489999999999999999 56999999999999998887654
No 42
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.78 E-value=0.0099 Score=63.83 Aligned_cols=53 Identities=17% Similarity=0.246 Sum_probs=40.9
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHHh
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
++..++...+...|+|+|||.|+.+..||... +.+|+|||.++..+..|+++-
T Consensus 54 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~ 108 (248)
T 3tfw_A 54 FLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENL 108 (248)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 44444433445699999999999999999764 789999999998776665443
No 43
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=95.78 E-value=0.0084 Score=63.51 Aligned_cols=53 Identities=9% Similarity=0.134 Sum_probs=40.3
Q ss_pred HHHHHHhccCCCC---eEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSS---HIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~---~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.++..++...+.+ .|+|+|||.||.+..||... +.+|++||.++..++.|++.
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 100 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKAL 100 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 3444444444455 89999999999999999753 78999999999877666543
No 44
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.75 E-value=0.0093 Score=62.92 Aligned_cols=43 Identities=16% Similarity=0.285 Sum_probs=36.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..||... +.+|+++|.++..++.|+++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~ 97 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH 97 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 45689999999999999999765 78999999998877666543
No 45
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.74 E-value=0.012 Score=59.08 Aligned_cols=41 Identities=32% Similarity=0.323 Sum_probs=35.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..++.. +.+|+|+|.++..++.|+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~ 92 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKE 92 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHH
Confidence 4568999999999999999976 9999999999887766654
No 46
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.73 E-value=0.013 Score=59.63 Aligned_cols=42 Identities=19% Similarity=0.158 Sum_probs=34.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..++.....+|+|||.++..++.|++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~ 85 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIAR 85 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHH
Confidence 346899999999999998776555689999999987766654
No 47
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=95.72 E-value=0.007 Score=65.58 Aligned_cols=41 Identities=20% Similarity=0.435 Sum_probs=34.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
....|+|+|||.|.|++.|+.....+|+|||.++..+..|+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~ 71 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLK 71 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHT
T ss_pred CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHH
Confidence 34689999999999999999654589999999987765553
No 48
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.72 E-value=0.0097 Score=63.19 Aligned_cols=43 Identities=28% Similarity=0.247 Sum_probs=36.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
+...|+|+|||.|+++..||... +.+|+++|.++..++.|+++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 104 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKY 104 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHH
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 45689999999999999999765 68999999998877666544
No 49
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.71 E-value=0.014 Score=60.22 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=36.6
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..||... +.+|+|+|.++..++.|+++
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~ 83 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDN 83 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 345689999999999999999764 58999999999877666543
No 50
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.70 E-value=0.0083 Score=63.83 Aligned_cols=45 Identities=20% Similarity=0.131 Sum_probs=37.4
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.....|+|+|||.|+++..|+...+.+|+|+|.++..++.|+++.
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~ 89 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENA 89 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 345689999999999999999877679999999998776665443
No 51
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.70 E-value=0.012 Score=61.62 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=39.9
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..++...+...|+|+|||.|+++..||... +.+|+++|.++..++.|+++
T Consensus 60 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~ 113 (229)
T 2avd_A 60 LLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPL 113 (229)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 33444444456699999999999999999753 68999999999877666543
No 52
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.68 E-value=0.011 Score=61.86 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=37.5
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
++..+........|+|+|||.|+++..|+. .+.+|+|||.++..++.|+.
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~ 82 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGDFTSRLQE-HFNDITCVEASEEAISHAQG 82 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHH
T ss_pred HHHHHHhhcCCCcEEEECCCCCHHHHHHHH-hCCcEEEEeCCHHHHHHHHH
Confidence 344444333455899999999999999995 46699999999877655543
No 53
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.66 E-value=0.0093 Score=64.82 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=36.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+..+|.+|+|||.++..++.|+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~ 106 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQL 106 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence 3468999999999999999977888999999998877666543
No 54
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.64 E-value=0.012 Score=58.21 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=34.1
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..++.. +.+|+|+|.++..++.|+.+
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~ 82 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKEN 82 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHH
Confidence 458999999999999999954 66699999998877666543
No 55
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.64 E-value=0.01 Score=61.17 Aligned_cols=49 Identities=16% Similarity=0.243 Sum_probs=37.7
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
++..+........|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~ 85 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAG 85 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHG
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH
Confidence 4444443344458999999999999999966 889999999987665553
No 56
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=95.63 E-value=0.013 Score=64.05 Aligned_cols=47 Identities=19% Similarity=0.194 Sum_probs=38.7
Q ss_pred ccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 686 NSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 686 ~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.......|+|+|||.|+++..|+..++.+|+|||.++..++.|+++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~ 125 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYN 125 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHH
Confidence 33445689999999999999999877899999999988776665443
No 57
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=95.62 E-value=0.013 Score=61.92 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhccC----CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 675 QVMSQVVAAVTNSC----DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 675 ~~~s~~v~~l~~~~----~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....++..+.... ....|+|+|||.|.++..|+...+.+|+|+|.++..++.|+++
T Consensus 61 ~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~ 121 (241)
T 2ex4_A 61 NSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTY 121 (241)
T ss_dssp HHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH
Confidence 34445566555432 3569999999999999999977777999999998877666543
No 58
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.62 E-value=0.016 Score=58.04 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=35.9
Q ss_pred ccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 686 NSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 686 ~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
.......|+|+|||.|+++..++... .+|+|+|.++..++.|++
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~ 73 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEM 73 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHH
Confidence 34445699999999999999999655 899999999887766654
No 59
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.61 E-value=0.014 Score=62.93 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=40.0
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..+....+...|+|+|||.||.+..||... +.+|++||.++..++-|++.
T Consensus 70 ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~ 123 (247)
T 1sui_A 70 FLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPV 123 (247)
T ss_dssp HHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 33333334456799999999999999999763 78999999999877666543
No 60
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.61 E-value=0.0086 Score=61.57 Aligned_cols=40 Identities=33% Similarity=0.359 Sum_probs=35.5
Q ss_pred eEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 692 HIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 692 ~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.|+|+|||.|.++..|+...+.+|+|+|.++..++.|+.+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~ 85 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN 85 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH
Confidence 8999999999999999987889999999998877666544
No 61
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.60 E-value=0.01 Score=63.87 Aligned_cols=41 Identities=12% Similarity=0.277 Sum_probs=34.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..|+.. +.+|+|||.++..+..|++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~ 70 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTEN 70 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHH
Confidence 4568999999999999999955 5899999999887766644
No 62
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.58 E-value=0.0098 Score=64.01 Aligned_cols=44 Identities=23% Similarity=0.201 Sum_probs=37.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
....|+|+|||.|+++..|+...+.+|+|||.++..++.|+++.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~ 89 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNA 89 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHH
Confidence 45689999999999999999887789999999998776665443
No 63
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=95.56 E-value=0.012 Score=64.09 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=40.1
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.++..+....+...|+|+|||.|.++..|+.. |.+|+|+|.++..++.|+++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~ 98 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKE 98 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHh
Confidence 44444444445568999999999999999954 78999999999877666543
No 64
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.54 E-value=0.016 Score=62.08 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+.+.+.+++..... ....|+|+|||.|.++..|+.. +.+|+|||.++..++.|++
T Consensus 36 ~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~ 90 (263)
T 3pfg_A 36 EAADLAALVRRHSP--KAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARR 90 (263)
T ss_dssp HHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC--CCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHh
Confidence 34455555554433 2358999999999999999954 7799999999887766644
No 65
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.53 E-value=0.015 Score=59.02 Aligned_cols=42 Identities=26% Similarity=0.298 Sum_probs=35.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+.. +.+|+|+|.++..++.|+++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 73 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERI 73 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHH
Confidence 3458999999999999999965 88999999998877666543
No 66
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.51 E-value=0.009 Score=63.61 Aligned_cols=42 Identities=21% Similarity=0.269 Sum_probs=36.0
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..|+..++.+|+|||.++..++.|+.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~ 96 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANE 96 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 346899999999999999998779999999999887665543
No 67
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.51 E-value=0.018 Score=61.03 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+++.+..++..+... ....|+|+|||.|.++..|+. .|.+|+|+|.++..++.|+++
T Consensus 26 ~~~~~~~~~~~~~~~-~~~~vLDlGcG~G~~~~~l~~-~~~~v~gvD~s~~~l~~a~~~ 82 (252)
T 1wzn_A 26 EIDFVEEIFKEDAKR-EVRRVLDLACGTGIPTLELAE-RGYEVVGLDLHEEMLRVARRK 82 (252)
T ss_dssp HHHHHHHHHHHTCSS-CCCEEEEETCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc-CCCEEEEeCCCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHH
Confidence 444445555544322 245899999999999999995 488999999998877666543
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=95.51 E-value=0.016 Score=59.63 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=34.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+.....+|+|+|.++..++.|+++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~ 102 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEEN 102 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 458999999999999999964455999999998877666543
No 69
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=95.50 E-value=0.014 Score=61.71 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=36.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
....|+|+|||.|+++..||. .+.+|+|||.++..++.|+.+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~-~~~~v~~vD~s~~~~~~a~~~~ 120 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFAL-TGMRVIAIDIDPVKIALARNNA 120 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEECccccCHHHHHHHH-cCCEEEEEECCHHHHHHHHHHH
Confidence 456899999999999999995 4799999999998877775443
No 70
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.50 E-value=0.012 Score=64.28 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=35.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...+|+|+|||.|.++..||. .|.+|+|||.++..++.|+++
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~-~g~~V~gvD~S~~ml~~Ar~~ 86 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALE-RGASVTVFDFSQRMCDDLAEA 86 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHH-TTCEEEEEESCHHHHHHHHHH
T ss_pred CcCEEEEEeCcchHHHHHHHh-cCCEEEEEECCHHHHHHHHHH
Confidence 346899999999999999995 588999999998877666543
No 71
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.49 E-value=0.0095 Score=64.78 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=30.2
Q ss_pred CeEEEEcCccchHhHHHHhcCCCeEEEEeCCcccc
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNT 725 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~ 725 (1101)
..|+|+|||.|.+++.|+ +.+.+|+|||.++..+
T Consensus 41 ~~vLDvGcGtG~~~~~l~-~~~~~v~gvD~s~~ml 74 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLA-EFFERVHAVDPGEAQI 74 (257)
T ss_dssp SEEEEESCTTTTTHHHHH-TTCSEEEEEESCHHHH
T ss_pred CCEEEEcCCCCHHHHHHH-HhCCEEEEEeCcHHhh
Confidence 489999999999999999 5678999999997654
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=95.48 E-value=0.017 Score=59.66 Aligned_cols=50 Identities=24% Similarity=0.426 Sum_probs=38.3
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
++..+.... ...|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+++
T Consensus 44 ~~~~~~~~~-~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 44 ILLAILGRQ-PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHHTC-CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT
T ss_pred HHHHhhcCC-CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh
Confidence 444443333 368999999999999999965 88999999998877666543
No 73
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.47 E-value=0.013 Score=61.54 Aligned_cols=44 Identities=27% Similarity=0.340 Sum_probs=36.7
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.++..|+..+ +.+|+|+|.++..++.|+++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~ 87 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNR 87 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh
Confidence 345689999999999999999775 89999999998877666543
No 74
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.47 E-value=0.016 Score=60.07 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=36.4
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCC--CeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHG--KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~--~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..|+...+ .+|+++|.++..++.|+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~ 121 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERT 121 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 3456899999999999999997664 8999999998877666543
No 75
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=95.47 E-value=0.02 Score=58.69 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 674 VQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 674 V~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
.+.|...+... .......|+|+|||.|+++..|+.....+|+|||.++..++.|+.
T Consensus 37 ~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~ 92 (200)
T 1ne2_A 37 AAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKR 92 (200)
T ss_dssp HHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence 34444444333 222346899999999999999996633479999999887766654
No 76
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.42 E-value=0.013 Score=62.08 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=35.9
Q ss_pred CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
+...|+|+|||.||.+..||... +.+|++||.++..++.|++.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~ 116 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKY 116 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 45689999999999999999764 67999999998877666543
No 77
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.42 E-value=0.026 Score=58.07 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=34.7
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+.....+|+|+|.++..++.|+..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~ 91 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN 91 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH
Confidence 3468999999999999999966334899999998877666543
No 78
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.42 E-value=0.014 Score=59.96 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=35.3
Q ss_pred HhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 684 VTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 684 l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+........|+|+|||.|.++..++...+.+|+|+|.++..++.|+.
T Consensus 18 ~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~ 64 (209)
T 2p8j_A 18 CNESNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAEN 64 (209)
T ss_dssp HHHSSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHH
T ss_pred HhccCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 33333456899999999998655545688999999999887766554
No 79
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.41 E-value=0.015 Score=64.10 Aligned_cols=43 Identities=16% Similarity=0.276 Sum_probs=35.7
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|++++.|+.. +.+|+|||.++..+..|+++
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~ 69 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKR 69 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHH
Confidence 34568999999999999999965 67999999998877666543
No 80
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.40 E-value=0.015 Score=61.54 Aligned_cols=44 Identities=11% Similarity=0.169 Sum_probs=36.2
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..|+...+.+|+++|.++..++.|+++
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~ 133 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRN 133 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH
Confidence 34458999999999999999976558999999998877666543
No 81
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.40 E-value=0.012 Score=62.94 Aligned_cols=40 Identities=15% Similarity=0.094 Sum_probs=34.1
Q ss_pred CCeEEEEcCccchHhHHHHhc-----CCCeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-----HGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-----~~~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|+|||.||++..||.. .+.+|+|||.++..+..|+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 458999999999999999965 4789999999998775553
No 82
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.40 E-value=0.018 Score=62.49 Aligned_cols=52 Identities=21% Similarity=0.360 Sum_probs=40.6
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+..++..+... ...|+|+|||.|.++..|+.. +.+|+|||.++..++.|+.+
T Consensus 58 l~~~l~~~~~~--~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~ 109 (285)
T 4htf_A 58 LDRVLAEMGPQ--KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQA 109 (285)
T ss_dssp HHHHHHHTCSS--CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhcCCC--CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHH
Confidence 44555555433 358999999999999999965 89999999998877666544
No 83
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.38 E-value=0.014 Score=64.68 Aligned_cols=45 Identities=22% Similarity=0.332 Sum_probs=36.7
Q ss_pred ccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 686 NSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 686 ~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.......|+|+|||.|+++..|+.. +.+|+|||.++..+..|+++
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~ 83 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKR 83 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHH
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHH
Confidence 3334568999999999999999954 78999999999877666543
No 84
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.37 E-value=0.017 Score=59.87 Aligned_cols=50 Identities=20% Similarity=0.354 Sum_probs=38.0
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
.++..+... ....|+|+|||.|.++..|+.. +.+|+|+|.++..+..|+.
T Consensus 36 ~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~ 85 (220)
T 3hnr_A 36 DILEDVVNK-SFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKE 85 (220)
T ss_dssp HHHHHHHHT-CCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred HHHHHhhcc-CCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHH
Confidence 344444433 3458999999999999999965 8899999999876655543
No 85
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.35 E-value=0.012 Score=65.05 Aligned_cols=45 Identities=13% Similarity=0.217 Sum_probs=38.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.....|+|+|||.|+++..|+..++.+|+|||.++..++.|+++.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~ 160 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRA 160 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 345689999999999999999777999999999988776665443
No 86
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=95.34 E-value=0.02 Score=59.95 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=35.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..|+.. +.+|+|+|.++..++.|+++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~ 111 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKL 111 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHH
Confidence 34568999999999999999965 58999999998877666543
No 87
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.30 E-value=0.015 Score=59.69 Aligned_cols=41 Identities=24% Similarity=0.253 Sum_probs=34.5
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.. |.+|+|+|.++..+..|+.+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~ 82 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQT 82 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHh
Confidence 358999999999999999965 88999999998877666543
No 88
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.28 E-value=0.013 Score=61.50 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=35.9
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..||..+ +.+|+|||.++..+..|+++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~ 81 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQK 81 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHH
Confidence 3579999999999999999764 79999999999887776544
No 89
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=95.28 E-value=0.014 Score=62.79 Aligned_cols=53 Identities=19% Similarity=0.251 Sum_probs=42.2
Q ss_pred HHHHHHhccC-CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSC-DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~-~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+++..+... ....|+|+|||.|.++..||.....+|+|||.++..++.|+..
T Consensus 38 ~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n 91 (259)
T 3lpm_A 38 VLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRS 91 (259)
T ss_dssp HHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHH
Confidence 4566666544 5669999999999999999977555999999999877776543
No 90
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.021 Score=62.56 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=37.4
Q ss_pred CCCeEEEEcCccchHhHHHHh--cCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILAL--QHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~--~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
....|+|+|||.|.++..|+. ..+.+|+|||.++..++.|+.+.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~ 81 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIK 81 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Confidence 356899999999999999997 45899999999998887776543
No 91
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.27 E-value=0.014 Score=64.36 Aligned_cols=44 Identities=11% Similarity=0.182 Sum_probs=34.9
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCC---CeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHG---KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~---~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.|++.|+.... .+|+|||.++..+..|+++
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 3356899999999999999996532 2399999999888777554
No 92
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.27 E-value=0.015 Score=64.42 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=36.7
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+..+|.+|+|||.++..++.|+++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~ 132 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQV 132 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 3468999999999999999977799999999998877666543
No 93
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=95.27 E-value=0.021 Score=60.07 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=35.3
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+.. +.+|+|+|.++..++.|+.+
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh
Confidence 458999999999999999965 88999999998877666544
No 94
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.24 E-value=0.025 Score=60.67 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 675 QVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 675 ~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+.+..++..+.. ....|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+.
T Consensus 42 ~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~ 94 (260)
T 2avn_A 42 RLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVARE 94 (260)
T ss_dssp HHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHh
Confidence 445566666554 3468999999999999999954 8899999999887766543
No 95
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.24 E-value=0.015 Score=61.51 Aligned_cols=43 Identities=7% Similarity=0.055 Sum_probs=35.1
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|+++..|+.....+|+|||.++..++.|+++.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~ 103 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWA 103 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHG
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHH
Confidence 4589999999999999997544459999999998877776543
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=95.23 E-value=0.019 Score=57.79 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCcccc
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNT 725 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~ 725 (1101)
+.+.+.+.+.... .....|+|+|||.|+++..|+... +|+|||.++..+
T Consensus 9 ~~~~l~~~l~~~~--~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~ 57 (170)
T 3q87_B 9 DTYTLMDALEREG--LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRAL 57 (170)
T ss_dssp HHHHHHHHHHHHT--CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHH
T ss_pred cHHHHHHHHHhhc--CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHH
Confidence 4455555544321 223489999999999999999654 999999997654
No 97
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.23 E-value=0.018 Score=63.43 Aligned_cols=59 Identities=14% Similarity=0.185 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
|.+.+.+.+...........|+|+|||.|.++..||...+.+|+|+|.++..++-|++.
T Consensus 107 ~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n 165 (284)
T 1nv8_A 107 ETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKN 165 (284)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 44444444433332223358999999999999999976688999999998877666543
No 98
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=95.22 E-value=0.015 Score=60.65 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=36.3
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|+++..||... +.+|+|||.++..+..|+++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~ 85 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV 85 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH
Confidence 4589999999999999999764 789999999988777665443
No 99
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.22 E-value=0.023 Score=59.45 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+.+.+.+++.... .....|+|+|||.|.++..|+... .+|+|+|.++..++.|++
T Consensus 26 ~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~ 80 (239)
T 3bxo_A 26 EASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARK 80 (239)
T ss_dssp HHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHH
Confidence 4445555555544 234589999999999999999653 499999999887665543
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.21 E-value=0.016 Score=60.17 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.++..++.....+|+|||.++..++.|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~ 94 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKK 94 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHH
Confidence 45899999999999998775555699999999887766654
No 101
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.21 E-value=0.015 Score=60.56 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA 728 (1101)
...|+|+|||.|+++..||..+ +.+|+|||.++..++.+
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~ 67 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKI 67 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence 4589999999999999999775 89999999999876543
No 102
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.19 E-value=0.02 Score=61.03 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=39.7
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~ 730 (1101)
++..++...+...|+|+|||.||.+..||... +.+|++||.++..++.|++
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 113 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLP 113 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 44444444456799999999999999999763 7899999999887766653
No 103
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.13 E-value=0.025 Score=62.78 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=39.9
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+.+++..+.-......|+|+|||.|+++..|+.....+|+|||.++...+-|.+
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 334555554333446899999999999999986544699999999987766543
No 104
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=95.11 E-value=0.022 Score=61.92 Aligned_cols=42 Identities=31% Similarity=0.329 Sum_probs=35.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+.. |.+|+|+|.++..++.|+.+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~ 161 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNET 161 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHH
Confidence 3458999999999999999965 88999999998877666543
No 105
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=95.10 E-value=0.015 Score=60.23 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=34.0
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
....|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~ 71 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAK 71 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH
Confidence 4568999999999999999976 899999999987665443
No 106
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.09 E-value=0.013 Score=62.99 Aligned_cols=46 Identities=26% Similarity=0.289 Sum_probs=35.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCcccc
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNT 725 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~ 725 (1101)
+.+...........|+|+|||.|.++..|+. .+.+|+|+|.++...
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~ 69 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMR 69 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHH
T ss_pred HHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHH
Confidence 3444444334456999999999999999995 789999999997544
No 107
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=95.09 E-value=0.023 Score=59.60 Aligned_cols=42 Identities=26% Similarity=0.247 Sum_probs=35.1
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~ 78 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENK 78 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHH
Confidence 3468999999999999999954 88999999998877666543
No 108
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=95.04 E-value=0.029 Score=58.63 Aligned_cols=43 Identities=23% Similarity=0.367 Sum_probs=35.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcCC------CeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHG------KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~------~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+...+ .+|+|+|.++..++.|+++
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 128 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLEN 128 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHH
Confidence 346899999999999999997654 6999999999877766543
No 109
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.01 E-value=0.014 Score=61.37 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=35.0
Q ss_pred CeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
..|+|+|||.|+++..|+ ..+.+|+|+|.++..++.|+++.
T Consensus 68 ~~vLDiGcG~G~~~~~l~-~~~~~v~gvD~s~~~~~~a~~~~ 108 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMA-SPERFVVGLDISESALAKANETY 108 (235)
T ss_dssp EEEEEETCTTCHHHHHHC-BTTEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHH-hCCCeEEEEECCHHHHHHHHHHh
Confidence 489999999999999998 47889999999998777665443
No 110
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.00 E-value=0.022 Score=62.16 Aligned_cols=53 Identities=28% Similarity=0.336 Sum_probs=40.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.++..+........|+|+|||.|.++..|+..+ +.+|+|+|.++.....|+++
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~ 66 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL 66 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 344444444456799999999999999999764 58999999998877666543
No 111
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=95.00 E-value=0.018 Score=63.93 Aligned_cols=44 Identities=9% Similarity=-0.016 Sum_probs=34.7
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHhh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSK 733 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~~ 733 (1101)
...|+|+|||.|.+...++...+.+|+|||.++..++.|+.+..
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~ 92 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYN 92 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHH
Confidence 46899999999965555554556899999999999888876543
No 112
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.99 E-value=0.027 Score=56.59 Aligned_cols=49 Identities=27% Similarity=0.420 Sum_probs=37.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
.++..+.. ....|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+.
T Consensus 38 ~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~ 86 (195)
T 3cgg_A 38 RLIDAMAP--RGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQ 86 (195)
T ss_dssp HHHHHHSC--TTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHhcc--CCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHH
Confidence 34454433 3458999999999999999965 8899999999877655543
No 113
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.99 E-value=0.017 Score=62.68 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=31.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCe--EEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKK--TLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~--V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+|++ |+. +.+ |+|||.++..+..|++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~ 61 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQT 61 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHT
T ss_pred CcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHH
Confidence 34589999999999999 764 456 9999999987766654
No 114
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.98 E-value=0.029 Score=62.42 Aligned_cols=49 Identities=12% Similarity=0.078 Sum_probs=38.5
Q ss_pred HhccCCCCeEEEEcCccchHh-HHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 684 VTNSCDSSHIIDLGGGQGYLS-TILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 684 l~~~~~~~~vVD~GsGkGyLs-r~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
++.-....+|+|+|||-|+++ ..+|..+|.+|+|||.++..++.|+++.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~ 166 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVI 166 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHH
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHH
Confidence 445555679999999998776 5566558999999999999887776544
No 115
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.97 E-value=0.018 Score=62.07 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=41.7
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
+..++...........|+|+|||.|+++..|+..+ +.+|+|+|.++..+..|+.+
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~ 80 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAREN 80 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 34444444433445699999999999999999765 88999999998877666543
No 116
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.97 E-value=0.018 Score=61.64 Aligned_cols=44 Identities=20% Similarity=0.176 Sum_probs=37.1
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHHhh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVRSK 733 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r~~ 733 (1101)
...|+|+|||.|.++..||..+ +..|+|||.++..++.|+++.+
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~ 91 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIR 91 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH
Confidence 3479999999999999999764 7899999999988877765543
No 117
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=94.93 E-value=0.025 Score=62.00 Aligned_cols=56 Identities=16% Similarity=0.324 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEeC-CccccchHHH
Q psy9966 674 VQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLDY-NQVNTHGAAV 730 (1101)
Q Consensus 674 V~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~-~~~~~~gA~~ 730 (1101)
-+.+++++...........|+|+|||.|+++..|+.. |. +|+|+|. ++..+..|+.
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~ 121 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLES 121 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHH
Confidence 4455566655544344568999999999999998864 55 9999999 7877666543
No 118
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=94.90 E-value=0.016 Score=61.24 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=34.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..|+.. |.+|+|||.++.....|+.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~ 81 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEG 81 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHT
T ss_pred CCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHh
Confidence 3468999999999999999864 8899999999877665543
No 119
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=94.89 E-value=0.026 Score=58.26 Aligned_cols=40 Identities=23% Similarity=0.305 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.++..|+.. +.+|+|+|.++..+..|+.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~ 83 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASR 83 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHH
Confidence 458999999999999999955 8899999999876655543
No 120
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=94.88 E-value=0.033 Score=56.83 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=35.3
Q ss_pred CCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+... +.+|+|+|.++..++.|+++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 66 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK 66 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 3589999999999999999773 47999999998877666544
No 121
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=94.88 E-value=0.027 Score=59.56 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 672 YEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 672 hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+.+....++..+. ......|+|+|||.|.++..|+.....+|+|+|.++..++.|+++
T Consensus 77 ~~~~~~~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~ 135 (254)
T 1xtp_A 77 VDIEGSRNFIASLP-GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRE 135 (254)
T ss_dssp HHHHHHHHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHH
Confidence 34444445555553 223568999999999999999976667899999998877666543
No 122
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=94.87 E-value=0.017 Score=61.38 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=35.2
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..||.. .+.+|+|||.++..++-|+..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~ 113 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKL 113 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 458999999999999999964 578999999998877666543
No 123
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.86 E-value=0.034 Score=59.78 Aligned_cols=44 Identities=30% Similarity=0.391 Sum_probs=34.5
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCC--CeEEEEeCCcc
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHG--KKTLSLDYNQV 723 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~--~~V~~IE~~~~ 723 (1101)
.++..+.- ....+|+|+|||.|+++..|+..+| .+|+|||.++.
T Consensus 34 ~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~ 79 (275)
T 3bkx_A 34 AIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASP 79 (275)
T ss_dssp HHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCT
T ss_pred HHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCcc
Confidence 44554432 2346899999999999999997654 89999999986
No 124
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=94.85 E-value=0.024 Score=58.84 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|+++..++.....+|+|||.++..++.|++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~ 95 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIK 95 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHH
Confidence 45899999999999998775544699999999987766654
No 125
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=94.84 E-value=0.021 Score=58.44 Aligned_cols=39 Identities=26% Similarity=0.278 Sum_probs=33.3
Q ss_pred eEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 692 HIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 692 ~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.|+|+|||.|.++..|+. .|.+|+|+|.++..++.|+++
T Consensus 32 ~vLdiGcG~G~~~~~l~~-~~~~v~~vD~s~~~~~~a~~~ 70 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLAS-LGYEVTAVDQSSVGLAKAKQL 70 (202)
T ss_dssp EEEECCCSCTHHHHHHHT-TTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHh-CCCeEEEEECCHHHHHHHHHH
Confidence 899999999999999995 488999999998776665543
No 126
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=94.83 E-value=0.037 Score=57.37 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=34.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+.+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 79 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREY 79 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHH
Confidence 458999999999999999965 45999999998877666543
No 127
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=94.83 E-value=0.027 Score=65.84 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=35.6
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~ 729 (1101)
.....|+|+|||.|+++..||...+ .+|+|||.++..+..|.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~ 283 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTI 283 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 3456899999999999999998765 58999999998877773
No 128
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=94.81 E-value=0.027 Score=59.10 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=35.6
Q ss_pred HHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEeCCccccchHH
Q psy9966 683 AVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 683 ~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~~~~~~~gA~ 729 (1101)
.+........|+|+|||.|.++..|+.. +. +|+|+|.++..++.|+
T Consensus 37 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~ 83 (243)
T 3bkw_A 37 AMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARAR 83 (243)
T ss_dssp HHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHH
T ss_pred HhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHH
Confidence 3333334568999999999999999965 66 9999999987665554
No 129
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=94.80 E-value=0.022 Score=58.50 Aligned_cols=42 Identities=19% Similarity=0.135 Sum_probs=35.4
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+.. .+.+|+|+|.++..++.|+..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~ 108 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQV 108 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 458999999999999999976 478999999998877666543
No 130
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=94.79 E-value=0.034 Score=56.47 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=30.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCC----------CeEEEEeCCcc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHG----------KKTLSLDYNQV 723 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~----------~~V~~IE~~~~ 723 (1101)
....|+|+|||.|+++..|+...+ .+|+|+|.++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 346899999999999999998754 79999999974
No 131
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=94.77 E-value=0.027 Score=59.21 Aligned_cols=39 Identities=26% Similarity=0.482 Sum_probs=33.3
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|+|||.|.++..|+.. +.+|+|||.++..++.|+
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~ 92 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGK 92 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHH
Confidence 358999999999999999965 889999999987665554
No 132
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.77 E-value=0.032 Score=61.65 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=36.7
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|+++..|+...+.+|+|+|.++..++.|+.+.
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~ 77 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRY 77 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHH
Confidence 4589999999999999999766889999999998777766543
No 133
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.76 E-value=0.032 Score=59.60 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|++++.|+... .+|+|+|.++..++.|+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~ 78 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAF 78 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHH
Confidence 35689999999999999999654 5999999998877666543
No 134
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=94.76 E-value=0.018 Score=63.28 Aligned_cols=44 Identities=23% Similarity=0.345 Sum_probs=37.5
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHHhh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVRSK 733 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r~~ 733 (1101)
...|+|+|||.|+++..||..+ +.+|+|||.++..++.|+++.+
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 4589999999999999999875 6899999999998887765543
No 135
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=94.70 E-value=0.024 Score=60.16 Aligned_cols=36 Identities=28% Similarity=0.295 Sum_probs=30.4
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCcccc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNT 725 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~ 725 (1101)
...|+|+|||.|.++..||.. ++.+|+|||.++..+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~m 61 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENL 61 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGG
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHH
Confidence 358999999999999999954 688999999995443
No 136
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=94.70 E-value=0.022 Score=61.68 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=43.0
Q ss_pred HHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 678 SQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 678 s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
+-+++..+.......|+|+|||.|.++..||... +.+|+|||.++..++.|++.
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n 79 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRS 79 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH
Confidence 3456666555556689999999999999999775 68999999999877777543
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=94.70 E-value=0.023 Score=60.05 Aligned_cols=43 Identities=12% Similarity=0.186 Sum_probs=36.2
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|.++..||.. ++..|+|||.++..+..|+++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~ 78 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASA 78 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHH
Confidence 458999999999999999976 4789999999998777776443
No 138
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=94.68 E-value=0.031 Score=59.33 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=34.5
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..|+.. +.+|+|+|.++..++.|+.
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~ 79 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQ 79 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHH
Confidence 4568999999999999999954 8899999999877655543
No 139
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=94.66 E-value=0.026 Score=61.81 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=34.6
Q ss_pred eEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 692 HIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 692 ~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.|+|+|||.|+++..|+.. |.+|+|||.++..++.|+++.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~ 124 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRL 124 (299)
T ss_dssp CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHH
T ss_pred cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHH
Confidence 8999999999999999955 899999999988776665443
No 140
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.63 E-value=0.021 Score=60.00 Aligned_cols=42 Identities=17% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCeEEEEcCccchHhHHHHhcCC-------CeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHG-------KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~-------~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.||++..|+...+ .+|+++|.++..++.|+++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 133 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKAN 133 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHH
Confidence 45899999999999999997554 5999999999887776544
No 141
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=94.54 E-value=0.023 Score=61.25 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=35.6
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|++|..||.. .+.+|++||.++..+.-|+..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~ 123 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERA 123 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 468999999999999999976 589999999998877666543
No 142
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.52 E-value=0.035 Score=60.11 Aligned_cols=40 Identities=30% Similarity=0.415 Sum_probs=34.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
....|+|+|||.|+++..|+. .+.+|+|+|.++..++.|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~ 96 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKAR 96 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHH
Confidence 346899999999999999996 8899999999987665554
No 143
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=94.52 E-value=0.035 Score=57.94 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=35.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcCC--CeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHG--KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~--~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+...+ .+|+|+|.++..++.|+.+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~ 121 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNN 121 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Confidence 346899999999999999997644 7999999998877666543
No 144
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.51 E-value=0.043 Score=58.08 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=39.1
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+..+++.+. ......|+|+|||.|+++..|+.. +.+|+|+|.++..++.|+.+
T Consensus 10 ~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 62 (239)
T 1xxl_A 10 LGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSF 62 (239)
T ss_dssp HHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH
T ss_pred cchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHH
Confidence 334455444 334568999999999999999955 46999999998877665443
No 145
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.51 E-value=0.02 Score=61.30 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=34.3
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|||+-.||... ..+|+|+|.++..++.|++
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~ 57 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVK 57 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 3589999999999999999763 5699999999887766653
No 146
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.48 E-value=0.02 Score=62.00 Aligned_cols=40 Identities=15% Similarity=0.211 Sum_probs=34.2
Q ss_pred CeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 691 SHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
..|+|+|||.|||+-.||... ..+|+|+|.++..++.|++
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~ 63 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQK 63 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 589999999999999999763 5689999999987776654
No 147
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.48 E-value=0.049 Score=61.45 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=36.2
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
.+...........|+|+|||.|.++..+|.....+|+|||.++ .+..|++
T Consensus 55 ~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~ 104 (340)
T 2fyt_A 55 FIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMD 104 (340)
T ss_dssp HHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHH
T ss_pred HHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHH
Confidence 3333333344568999999999999999965345999999996 5555543
No 148
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=94.47 E-value=0.034 Score=59.35 Aligned_cols=42 Identities=19% Similarity=0.225 Sum_probs=35.7
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.. ++.+|+|+|.++..++.|++.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~ 108 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKN 108 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH
Confidence 458999999999999999876 489999999999877776543
No 149
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=94.46 E-value=0.015 Score=64.94 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=36.7
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|||+|||.|..+..|+... +.+|+|||.++..++.|+++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~ 70 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKL 70 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 4589999999999999999775 789999999998887776543
No 150
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=94.45 E-value=0.03 Score=59.11 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=34.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..||...+ .+|+|||.++..++.|++
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~ 116 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLD 116 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHH
Confidence 346899999999999999997754 799999999876655543
No 151
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=94.44 E-value=0.039 Score=56.39 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=29.9
Q ss_pred CCeEEEEcCccchHhHHHHhcC---CCeEEEEeCCcc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH---GKKTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~---~~~V~~IE~~~~ 723 (1101)
...|+|+|||-|.+++.|+..+ +.+|+|+|.++.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 4589999999999999999765 489999999973
No 152
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.44 E-value=0.028 Score=58.48 Aligned_cols=41 Identities=29% Similarity=0.392 Sum_probs=34.8
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.. +.+|+|+|.++..+..|+++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~ 71 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETA 71 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHH
Confidence 358999999999999999965 88999999998877666543
No 153
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.43 E-value=0.039 Score=57.67 Aligned_cols=42 Identities=10% Similarity=0.095 Sum_probs=36.5
Q ss_pred CCeEEEEcCc-cchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGG-QGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsG-kGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+||| .|.++..||...+.+|+|+|.++..++.|++.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~ 98 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRN 98 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHH
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHH
Confidence 4589999999 99999999976689999999999887776543
No 154
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.42 E-value=0.031 Score=57.87 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=35.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..|+... +.+|+|+|.++..+..|+.+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 81 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEK 81 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 34589999999999999999764 58999999998877666544
No 155
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=94.39 E-value=0.029 Score=61.22 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=35.1
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
....|+|+|||.|.++..++...+.+|+|||.++..++.|+++.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHH
Confidence 34689999999999776666556889999999988777665543
No 156
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=94.37 E-value=0.021 Score=56.74 Aligned_cols=42 Identities=21% Similarity=0.337 Sum_probs=34.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+.... +|+|+|.++..++.|+.+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh
Confidence 345899999999999999997655 999999998776655543
No 157
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=94.36 E-value=0.031 Score=57.22 Aligned_cols=42 Identities=29% Similarity=0.267 Sum_probs=33.7
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.....+|+|+|.++..++.|+++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~ 84 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQAC 84 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHh
Confidence 458999999999999999965323999999998877666543
No 158
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=94.31 E-value=0.042 Score=58.08 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+... .+|+|||.++..++.|+++
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~-~~v~gvD~s~~~~~~a~~~ 97 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFF-PRVIGLDVSKSALEIAAKE 97 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHS-SCEEEEESCHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHhC-CCEEEEECCHHHHHHHHHh
Confidence 4579999999999999999654 4999999998877666543
No 159
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=94.30 E-value=0.051 Score=53.31 Aligned_cols=44 Identities=16% Similarity=0.164 Sum_probs=34.3
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCc
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQ 722 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~ 722 (1101)
+++..+........|+|+|||.|.++..|+..+ +.+|+|+|.++
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc
Confidence 444444423345689999999999999999764 68999999997
No 160
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.29 E-value=0.046 Score=58.67 Aligned_cols=41 Identities=29% Similarity=0.489 Sum_probs=34.6
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|+++..|+... +.+|+|+|.++..++.|.+
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~ 127 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAK 127 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Confidence 4589999999999999999764 8899999999876655543
No 161
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.29 E-value=0.023 Score=60.90 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=34.4
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|||+-.||... ..+|+|+|.++..++.|++
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~ 63 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALK 63 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 3589999999999999999763 5689999999887766653
No 162
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=94.29 E-value=0.043 Score=61.42 Aligned_cols=46 Identities=17% Similarity=0.269 Sum_probs=37.5
Q ss_pred cCCCCeEEEEcCccchHhHHHHhcCC--CeEEEEeCCccccchHHHHh
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQHG--KKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~~~--~~V~~IE~~~~~~~gA~~r~ 732 (1101)
......|+|+|||.|+++..||...| .+|+|+|.++..++.|++..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~ 150 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNY 150 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHH
Confidence 33456899999999999999997644 89999999998887776543
No 163
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=94.28 E-value=0.031 Score=58.58 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=30.6
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCcccc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNT 725 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~ 725 (1101)
...|+|+|||.|+++..||... +.+|+|||.++..+
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l 94 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPF 94 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHH
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHH
Confidence 4589999999999999999765 46999999998644
No 164
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=94.27 E-value=0.052 Score=63.34 Aligned_cols=57 Identities=16% Similarity=0.082 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+-+.|.+.+.......+...|+|+|||.|.++..||.. +.+|+|||.++..++.|+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~ 326 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQ 326 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHH
Confidence 34444454444444444568999999999999999965 8899999999987766653
No 165
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=94.24 E-value=0.037 Score=58.75 Aligned_cols=42 Identities=26% Similarity=0.366 Sum_probs=34.1
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..|+.....+|+|+|.++..++.|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~ 85 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKR 85 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence 456899999999999999996533399999999877655543
No 166
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=94.22 E-value=0.048 Score=58.05 Aligned_cols=48 Identities=19% Similarity=0.165 Sum_probs=38.3
Q ss_pred HhccCCCCeEEEEcCccchHhHHHHhc-C-CCeEEEEeCCccccchHHHH
Q psy9966 684 VTNSCDSSHIIDLGGGQGYLSTILALQ-H-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 684 l~~~~~~~~vVD~GsGkGyLsr~La~~-~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.........|+|+|||.|+++..|+.. . +.+|+|+|.++..++.|++.
T Consensus 88 ~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~ 137 (255)
T 3mb5_A 88 YAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN 137 (255)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH
T ss_pred hhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH
Confidence 334444568999999999999999976 2 78999999998877666543
No 167
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.18 E-value=0.064 Score=60.59 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=32.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
....|+|+|||.|.|+..+|.....+|+|||.++ ....|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~ 89 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE 89 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH
Confidence 3568999999999999999965556999999985 444444
No 168
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=94.16 E-value=0.013 Score=62.73 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=33.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA 728 (1101)
....|+|+|||.|.++..|+.. +.+|+|||.++..+..|
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a 67 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLS 67 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHH
Confidence 3468999999999999999965 68999999998877555
No 169
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=94.13 E-value=0.055 Score=62.77 Aligned_cols=54 Identities=19% Similarity=0.300 Sum_probs=40.8
Q ss_pred HHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCe-EEEEeCCccccchHHHHh
Q psy9966 678 SQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKK-TLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 678 s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~-V~~IE~~~~~~~gA~~r~ 732 (1101)
..++..+ .......|+|+|||.|.++..+|...+.. |+|||.++..+.-|+...
T Consensus 163 ~~il~~l-~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~ 217 (438)
T 3uwp_A 163 AQMIDEI-KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMD 217 (438)
T ss_dssp HHHHHHH-CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3444443 33345689999999999999999887775 999999988777665433
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.09 E-value=0.05 Score=57.38 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=36.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.++..++.. +.+|+++|.++...+.|+++
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~ 132 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKN 132 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHH
Confidence 34568999999999999999977 89999999998877666543
No 171
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.07 E-value=0.036 Score=59.18 Aligned_cols=43 Identities=23% Similarity=0.176 Sum_probs=35.8
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|.++..||... +..|+|||.++..+..|+++.
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~ 93 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRI 93 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHH
Confidence 4589999999999999999764 679999999988776665443
No 172
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.04 E-value=0.055 Score=56.67 Aligned_cols=39 Identities=23% Similarity=0.288 Sum_probs=33.5
Q ss_pred CeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
..|+|+|||.|.++..|+.. .+|+|+|.++..++.|+++
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~ 73 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEK 73 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHh
Confidence 58999999999999999965 8999999998877666543
No 173
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.01 E-value=0.045 Score=61.94 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=33.3
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..+|.....+|+|||.++ .+..|+++
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~ 107 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKI 107 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHH
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHH
Confidence 468999999999999999976445999999994 56555543
No 174
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=94.00 E-value=0.057 Score=59.01 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=40.2
Q ss_pred HHHHHHhccCCCCeEEEEcCcc---chHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQ---GYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGk---GyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.++..+....+..+|+|+|||. |++...++.. ++.+|++||.++..++.|+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~ 123 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRAL 123 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHh
Confidence 3444554344567999999999 9998877654 589999999998877776554
No 175
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=93.98 E-value=0.042 Score=63.27 Aligned_cols=42 Identities=14% Similarity=0.268 Sum_probs=35.0
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|++++.|+. .|.+|+|||.++...+.|+++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQE-AGVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHH-TTCEEEEECCCHHHHHHHHTT
T ss_pred CCCEEEEecCCCCHHHHHHHH-cCCcEEEECCCHHHHHHHHHc
Confidence 356899999999999999994 588999999998877666543
No 176
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.96 E-value=0.061 Score=58.06 Aligned_cols=44 Identities=16% Similarity=0.236 Sum_probs=36.1
Q ss_pred cCCCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchHHH
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA~~ 730 (1101)
......|+|+|||.|+++..|+.. .+.+|+++|.++..++.|++
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~ 142 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARR 142 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Confidence 334458999999999999999965 37899999999887766654
No 177
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=93.96 E-value=0.058 Score=59.99 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=35.4
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|+++..||... +.+|+|||.++..++.|+++
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~ 119 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRN 119 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence 345689999999999999999653 35799999998877666544
No 178
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=93.94 E-value=0.062 Score=60.21 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.|+..+|.....+|+|||.++ .+..|++
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~ 78 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKE 78 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHH
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHH
Confidence 458999999999999999965345999999994 5555543
No 179
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.89 E-value=0.04 Score=58.46 Aligned_cols=43 Identities=23% Similarity=0.173 Sum_probs=35.7
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+..+ +.+|+|+|.++..++.|+.+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh
Confidence 34689999999999999999764 88999999998877666543
No 180
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=93.88 E-value=0.065 Score=58.15 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 673 EVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 673 EV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
|-+.+.+.+..... .....|+|+|||.|.++..|+.. .+.+|+|+|.++..++.|+..
T Consensus 94 ~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n 152 (276)
T 2b3t_A 94 DTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRN 152 (276)
T ss_dssp THHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 34444443333322 33458999999999999999965 478999999998877666543
No 181
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.88 E-value=0.056 Score=61.98 Aligned_cols=40 Identities=23% Similarity=0.379 Sum_probs=35.1
Q ss_pred CeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 691 SHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
..|+|+|||.|.++..++..+ +.+|+|||.++..++.|+.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~ 264 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRL 264 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHH
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHH
Confidence 689999999999999999775 8999999999887766654
No 182
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=93.84 E-value=0.063 Score=56.94 Aligned_cols=44 Identities=18% Similarity=0.146 Sum_probs=36.2
Q ss_pred cCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHH
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~ 730 (1101)
......|+|+|||.|.++..|+... +.+|+++|.++..++.|++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~ 139 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAER 139 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Confidence 3345689999999999999999763 7899999999887766654
No 183
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=93.80 E-value=0.069 Score=55.13 Aligned_cols=34 Identities=21% Similarity=0.483 Sum_probs=30.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCcc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQV 723 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~ 723 (1101)
....|||+|||-|.++..||.. +.+|+|||.++.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~ 58 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM 58 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC
T ss_pred CCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc
Confidence 3568999999999999999966 889999999974
No 184
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.79 E-value=0.047 Score=56.17 Aligned_cols=46 Identities=11% Similarity=0.249 Sum_probs=35.0
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEeCCccccchHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~~~~~~~gA~~ 730 (1101)
+++..+.. ....|+|+|||.|+++..| +. +|+|+|.++..++.|++
T Consensus 28 ~~l~~~~~--~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~ 74 (211)
T 2gs9_A 28 RALKGLLP--PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRR 74 (211)
T ss_dssp HHHHTTCC--CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHH
T ss_pred HHHHHhcC--CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHH
Confidence 34444443 3568999999999999888 66 99999999876655543
No 185
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=93.71 E-value=0.093 Score=56.46 Aligned_cols=40 Identities=28% Similarity=0.438 Sum_probs=34.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.++..++. .|.+|+|+|.++..++.|++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~ 160 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEK-LGGKALGVDIDPMVLPQAEA 160 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCGGGHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHH-hCCeEEEEECCHHHHHHHHH
Confidence 45899999999999999885 56699999999987766654
No 186
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=93.69 E-value=0.067 Score=58.43 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=42.6
Q ss_pred CCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 665 LMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 665 ~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+..+.-..+-+++..+ .. ....|+|+|||.|+++..+|.....+|+|+|.++..++.|++
T Consensus 107 ~f~~~~~~~~~~l~~~----~~--~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~ 166 (278)
T 2frn_A 107 MFSPANVKERVRMAKV----AK--PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE 166 (278)
T ss_dssp CCCGGGHHHHHHHHHH----CC--TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH
T ss_pred eEcCCcHHHHHHHHHh----CC--CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 3445545555554443 22 245899999999999999996543479999999987766653
No 187
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=93.69 E-value=0.055 Score=59.54 Aligned_cols=44 Identities=16% Similarity=0.133 Sum_probs=36.2
Q ss_pred CCCeEEEEcCccchHhHHHH--hcCCCeEEEEeCCccccchHHHHh
Q psy9966 689 DSSHIIDLGGGQGYLSTILA--LQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La--~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
....|+|+|||.|+++..|| ..++.+|+|||.++..++.|+++.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~ 163 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLA 163 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHH
Confidence 34589999999999999995 446899999999998777665443
No 188
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.67 E-value=0.071 Score=57.66 Aligned_cols=42 Identities=24% Similarity=0.268 Sum_probs=34.5
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|.++..|+.....+|+|+|.++..++.|+++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~ 106 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVR 106 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 458999999999999998865445999999998877666543
No 189
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.62 E-value=0.094 Score=59.97 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||.|.++..+|.....+|+|||.+ ..++.|+++
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~ 104 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARAL 104 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHH
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHH
Confidence 3456899999999999999996533399999999 666666443
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=93.49 E-value=0.092 Score=62.20 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=34.1
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|.++..+|.....+|+|||.++ ..+.|+++
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~ 199 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVL 199 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHH
Confidence 3468999999999999999975567999999987 55555543
No 191
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=93.48 E-value=0.056 Score=57.65 Aligned_cols=42 Identities=26% Similarity=0.306 Sum_probs=35.7
Q ss_pred CCeEEEEcCccchHhHHHHhc---CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ---HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~---~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+.. .+.+|+|+|.++..++.|+..
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~ 96 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKN 96 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHH
Confidence 458999999999999999965 368999999999888777643
No 192
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=93.38 E-value=0.049 Score=56.97 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~ 729 (1101)
....|+|+|||.|+++..||... +.+|+|||.++..+..|.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~ 115 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV 115 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH
Confidence 34589999999999999999764 479999999987654444
No 193
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=93.38 E-value=0.032 Score=59.31 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=34.7
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|.++..|+.....+|+|+|.++..++.|+++.
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~ 99 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWL 99 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHH
Confidence 4689999999999999998543349999999998777765543
No 194
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.35 E-value=0.08 Score=66.07 Aligned_cols=54 Identities=19% Similarity=0.246 Sum_probs=40.4
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCC--CeEEEEeCCccccchHHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHG--KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~--~~V~~IE~~~~~~~gA~~r 731 (1101)
+..++..+.. .....|+|+|||.|+++..||...+ .+|+|||.++..++.|+++
T Consensus 710 le~LLelL~~-~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReR 765 (950)
T 3htx_A 710 VEYALKHIRE-SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKM 765 (950)
T ss_dssp HHHHHHHHHH-SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhcc-cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHH
Confidence 3334444432 2456899999999999999996543 7999999999888777554
No 195
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=93.31 E-value=0.056 Score=58.68 Aligned_cols=50 Identities=14% Similarity=0.169 Sum_probs=37.2
Q ss_pred HHHHhccCCCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchHHH
Q psy9966 681 VAAVTNSCDSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 681 v~~l~~~~~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+...........|+|+|||.|.++..|+.. .+.+|+|+|.++..++.|++
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~ 153 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMD 153 (275)
T ss_dssp ----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHH
T ss_pred HHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 333334444568999999999999999965 37899999999887766654
No 196
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=93.24 E-value=0.088 Score=57.38 Aligned_cols=59 Identities=22% Similarity=0.208 Sum_probs=42.8
Q ss_pred CCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 666 MSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 666 mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
.+++...|..++ +....+...|+|+|||.|+++..||... +.+|+|||.++..++.|++
T Consensus 102 ~~~~~~~e~~~~------~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~ 161 (272)
T 3a27_A 102 WSQGNIEERKRM------AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE 161 (272)
T ss_dssp CCGGGHHHHHHH------HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH
T ss_pred ECCCchHHHHHH------HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Confidence 355555555543 2223345689999999999999999764 6799999999887766653
No 197
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=93.06 E-value=0.12 Score=56.91 Aligned_cols=56 Identities=16% Similarity=0.199 Sum_probs=42.4
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcc---chHhHHHHh-cCCCeEEEEeCCccccchHHHH
Q psy9966 676 VMSQVVAAVTNSCDSSHIIDLGGGQ---GYLSTILAL-QHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 676 ~~s~~v~~l~~~~~~~~vVD~GsGk---GyLsr~La~-~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
-+...+..++...++.+|||+|||. |++.+.+.. .++.+|++||.++..+..|+.+
T Consensus 65 fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~ 124 (277)
T 3giw_A 65 WMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGL 124 (277)
T ss_dssp HHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHH
T ss_pred HHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHH
Confidence 3445667777666788999999995 777666553 3689999999999887766543
No 198
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=93.01 E-value=0.067 Score=56.33 Aligned_cols=39 Identities=8% Similarity=0.179 Sum_probs=32.2
Q ss_pred CCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA 728 (1101)
...|+|+|||.|+++..||... +.+|+|||.++..++.+
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~ 118 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDL 118 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHH
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHH
Confidence 4589999999999999999774 58999999997644333
No 199
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=92.95 E-value=0.061 Score=58.46 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=29.2
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQ 722 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~ 722 (1101)
...|+|+|||.|.++..||.. |.+|+|||.++
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~ 115 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL-GLTVTAFEQHP 115 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT-TCCEEEEECCH
T ss_pred cCeEEEeeCccCHHHHHHHHh-CCEEEEEECCh
Confidence 458999999999999999964 78999999999
No 200
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=92.95 E-value=0.084 Score=59.59 Aligned_cols=55 Identities=13% Similarity=0.088 Sum_probs=43.4
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
+++.+..++.......|+|+|||.|.++..+|... +.+|+|+|.++..++.|+..
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n 247 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA 247 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH
Confidence 45555556555556689999999999999999754 59999999999888777643
No 201
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=92.91 E-value=0.12 Score=59.50 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=34.3
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||-|+++..|+.. +.+|+|||.++..++.|+.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~ 273 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQK 273 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHH
T ss_pred CCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHH
Confidence 458999999999999999965 8899999999887766643
No 202
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=92.89 E-value=0.092 Score=59.07 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=49.4
Q ss_pred hhccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCC------CeEEEEeCCccccchHHH
Q psy9966 661 KVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHG------KKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 661 ~~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~------~~V~~IE~~~~~~~gA~~ 730 (1101)
..-+..+|+ ..+..|+.++..+........|+|.|||.|.++..++.... .+|+|+|.++....-|+.
T Consensus 104 ~~g~~~TP~--~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~ 177 (344)
T 2f8l_A 104 QVNHQMTPD--SIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALV 177 (344)
T ss_dssp CGGGCCCCH--HHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHH
T ss_pred ccCcCCChH--HHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHH
Confidence 446667887 44445577777664443446899999999999998885532 789999999887766643
No 203
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=92.77 E-value=0.11 Score=56.22 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=36.0
Q ss_pred cCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHH
Q psy9966 687 SCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 687 ~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~ 730 (1101)
......|+|+|||.|.++..|+... +.+|+++|.++..++.|++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~ 155 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES 155 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH
Confidence 3344689999999999999999763 6899999999887766654
No 204
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=92.76 E-value=0.17 Score=56.89 Aligned_cols=62 Identities=15% Similarity=0.091 Sum_probs=43.1
Q ss_pred CCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 665 LMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 665 ~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
|..+--....+.+.+.+.. ......|+|+|||.|.++..+|. .|.+|++||.++..++.|++
T Consensus 132 g~f~dq~~~~~~l~~~~~~---~~~~~~VLDlgcGtG~~sl~la~-~ga~V~~VD~s~~al~~a~~ 193 (332)
T 2igt_A 132 GVFPEQIVHWEWLKNAVET---ADRPLKVLNLFGYTGVASLVAAA-AGAEVTHVDASKKAIGWAKE 193 (332)
T ss_dssp SCCGGGHHHHHHHHHHHHH---SSSCCEEEEETCTTCHHHHHHHH-TTCEEEEECSCHHHHHHHHH
T ss_pred eechHHHHHHHHHHHHHHh---cCCCCcEEEcccccCHHHHHHHH-cCCEEEEEECCHHHHHHHHH
Confidence 4444333344445555433 12235899999999999999996 46699999999887766654
No 205
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=92.72 E-value=0.054 Score=58.41 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
..+|+|+|||-|.++..++...-.+|+|+|.++..++-|+++.
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWL 98 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHH
Confidence 4589999999998887776433247999999999888776543
No 206
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=92.68 E-value=0.15 Score=57.45 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=36.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+...|+|+|||.|+++..|+..+ +.+|+++|. +..++.|+++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 232 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNEN 232 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHH
Confidence 345699999999999999999775 889999999 8877666543
No 207
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=92.63 E-value=0.11 Score=57.78 Aligned_cols=53 Identities=9% Similarity=0.094 Sum_probs=40.6
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+++.+........|+|+|||-|..+..||... +.+|+|+|.++..++.|+.+
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~ 162 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLN 162 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH
Confidence 345555555555689999999999999999764 47999999998876665543
No 208
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.54 E-value=0.1 Score=57.56 Aligned_cols=59 Identities=19% Similarity=0.207 Sum_probs=45.9
Q ss_pred CCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 665 LMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 665 ~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
+-+++=..|=.+++.++. ....|+|+|||.|++|-.+|.....+|+|+|.|+..++.|+
T Consensus 107 ~f~~~~~~er~ri~~~~~------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~ 165 (278)
T 3k6r_A 107 MFSPANVKERVRMAKVAK------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp CCCGGGHHHHHHHHHHCC------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHhcC------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHH
Confidence 457777777777665542 34589999999999999888665679999999998776554
No 209
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=92.51 E-value=0.12 Score=59.09 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=39.4
Q ss_pred HHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHHHH
Q psy9966 678 SQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 678 s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~~r 731 (1101)
++.+..++ ......|+|+|||.|.++..+|.... .+|+|+|.++..++.|+..
T Consensus 207 a~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n 260 (373)
T 3tm4_A 207 ANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN 260 (373)
T ss_dssp HHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence 33333444 34456899999999999999996532 3999999999888777644
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.33 E-value=0.17 Score=58.95 Aligned_cols=40 Identities=25% Similarity=0.343 Sum_probs=34.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
+...|+|+|||.|.++..||. .+.+|+|||.++..++.|+
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~-~~~~V~gvD~s~~ai~~A~ 329 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAK-RGFNVKGFDSNEFAIEMAR 329 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeeccchHHHHHHHH-cCCEEEEEECCHHHHHHHH
Confidence 345899999999999999995 4789999999988776664
No 211
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=92.21 E-value=0.15 Score=57.20 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=35.4
Q ss_pred eEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 692 HIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 692 ~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.|+|+|||-|++++.|+.. .+.+|++||.++..++-|+++
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~ 132 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREW 132 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHH
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHh
Confidence 8999999999999999974 588999999999988777654
No 212
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=92.18 E-value=0.11 Score=56.41 Aligned_cols=52 Identities=17% Similarity=0.228 Sum_probs=39.5
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcC-C-CeEEEEeCCccccchHHHH
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-G-KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~-~~V~~IE~~~~~~~gA~~r 731 (1101)
++..+........|+|+|||-|..+..||... + .+|+|+|.++..++.|+++
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~ 127 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSN 127 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHH
Confidence 44455444455689999999999999999753 4 7999999998776655443
No 213
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.01 E-value=0.11 Score=59.27 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=36.2
Q ss_pred CCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|.++..|+.. .+.+|+|+|.++..++.|+++.
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~ 128 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYV 128 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTH
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH
Confidence 458999999999999999976 4679999999998777766543
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=92.00 E-value=0.13 Score=56.42 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=36.1
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||-|++++.++.....+|++||.++..++-|++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~ 117 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDL 117 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 4568999999999999999966456999999999888776543
No 215
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=91.94 E-value=0.16 Score=57.53 Aligned_cols=43 Identities=14% Similarity=0.184 Sum_probs=35.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+...|||+|||.|+++..|+.. ++.+|+++|. +..++.|+++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 221 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQ 221 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHH
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHH
Confidence 34679999999999999999976 4899999998 7666555443
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=91.92 E-value=0.17 Score=57.00 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||-|++++.|+... +.+|++||.++..++-|+++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~ 163 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQF 163 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 345799999999999999999664 57999999999888777654
No 217
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=91.92 E-value=0.2 Score=57.09 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 674 VQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 674 V~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
-+.|...+.......+ ..|+|+|||.|.++..||. ...+|+|||.++..++.|++
T Consensus 199 ~~~l~~~~~~~~~~~~-~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~ 253 (369)
T 3bt7_A 199 NIQMLEWALDVTKGSK-GDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQY 253 (369)
T ss_dssp HHHHHHHHHHHTTTCC-SEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHH
Confidence 3445555544443333 5799999999999999995 56799999999988776653
No 218
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=91.87 E-value=0.18 Score=56.46 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=33.6
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|||+|||.|+++..|+..+ +.+++++|. +..++.|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 220 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARK 220 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHH
Confidence 6799999999999999999764 789999999 666655544
No 219
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=91.80 E-value=0.14 Score=52.89 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=30.7
Q ss_pred HHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCcc
Q psy9966 680 VVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQV 723 (1101)
Q Consensus 680 ~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~ 723 (1101)
++..+........|+|+|||.|.++..|+ .+|+|+|.++.
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~ 97 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR----NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC
Confidence 44444433334589999999999999884 78999999976
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=91.68 E-value=0.19 Score=55.97 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||-|.+++.|+..+ +.+|++||.++..++-|+++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~ 120 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRH 120 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence 345799999999999999999764 67999999999888777653
No 221
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=91.58 E-value=0.23 Score=56.96 Aligned_cols=38 Identities=26% Similarity=0.469 Sum_probs=29.5
Q ss_pred CCeEEEEcCccchHhHHHHhcCC-CeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHG-KKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~-~~V~~IE~~~~~~~gA~ 729 (1101)
.+.|+|+|||.|-||.+.| +.| .+|+|||.++ ....|+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa-~aGA~~V~ave~s~-~~~~a~ 122 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCA-QAGARRVYAVEASA-IWQQAR 122 (376)
T ss_dssp TCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-THHHHH
T ss_pred CCEEEEeCCCccHHHHHHH-HhCCCEEEEEeChH-HHHHHH
Confidence 4689999999999987666 566 5899999985 344443
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=91.50 E-value=0.26 Score=54.76 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=34.7
Q ss_pred CeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 691 SHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
..|+|+|||.|+++..|+..+ +.+|+++|. +..++.|+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 209 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDN 209 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHH
Confidence 699999999999999999764 789999999 8877777544
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=91.43 E-value=0.15 Score=55.75 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=36.7
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
+...|+|+|||-|.+++.++..+ ..+|++||.++..++-|++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~ 118 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKF 118 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHH
Confidence 45799999999999999999764 47999999999988777653
No 224
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=91.32 E-value=0.23 Score=54.93 Aligned_cols=43 Identities=12% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+...|+|+|||.|+++..|+..+ +.+|+++|.+ ..++.|+++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~ 207 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKEN 207 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHH
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHH
Confidence 345699999999999999999774 7899999998 766666543
No 225
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=91.26 E-value=0.2 Score=53.79 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=34.2
Q ss_pred CCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||-|+++..||-. ..=+|+|+|.++.....|.+
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~ 120 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT 120 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH
Confidence 568999999999999999965 45689999999887655543
No 226
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=91.24 E-value=0.19 Score=55.63 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+...|+|+|||-|.+++.|+..+ ..+|++||.++..++-|++.
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~ 126 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQY 126 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHH
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHh
Confidence 346799999999999999999764 57899999999988777653
No 227
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=90.93 E-value=0.2 Score=55.49 Aligned_cols=44 Identities=11% Similarity=0.117 Sum_probs=36.7
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.....|+|+|||-|.+++.|+..+ +.+|++||.++..++.|+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~ 138 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQH 138 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 345689999999999999999654 57999999999887777654
No 228
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=90.85 E-value=0.24 Score=56.70 Aligned_cols=50 Identities=2% Similarity=0.090 Sum_probs=37.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA 728 (1101)
+++..+........|+|+|||.|.++..++.. .+.+|+|+|.++..++.|
T Consensus 29 ~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 29 DFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred HHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 33334333223348999999999999999965 468999999999887666
No 229
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=90.74 E-value=0.19 Score=55.79 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+...|+|+|||-|++++.|+..+ ..+|++||.++..++-|++.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~ 138 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKF 138 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 345799999999999999999664 57999999999888777654
No 230
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=90.73 E-value=0.28 Score=54.92 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=36.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||-|.+++.++... +.+|+++|.++..++-|++.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~ 159 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIY 159 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 45689999999999999999663 68999999999887776643
No 231
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=90.63 E-value=0.12 Score=58.20 Aligned_cols=41 Identities=20% Similarity=0.291 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.++..|+... +.+|+|+|.++..++.|++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~ 238 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRA 238 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHH
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 3479999999999999999764 5799999999876655543
No 232
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=90.57 E-value=0.28 Score=54.12 Aligned_cols=43 Identities=14% Similarity=0.213 Sum_probs=36.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||-|.+++.++..+ +.+|++||.++..++-|++.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~ 133 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKY 133 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHH
Confidence 34689999999999999999764 57999999999877766543
No 233
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=90.48 E-value=0.3 Score=55.34 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=35.1
Q ss_pred CCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
.+...|||+|||.|+++..|+..+ +.+++++|. +..++.|++
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 243 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARE 243 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHH
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHH
Confidence 346799999999999999999774 899999999 776666654
No 234
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=90.41 E-value=0.19 Score=58.28 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=35.8
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHh
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
...|+|+|||.|+.+..||. .+.+|+|||.++..++.|+...
T Consensus 94 g~~VLDLgcG~G~~al~LA~-~g~~V~~VD~s~~~l~~Ar~N~ 135 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMS-KASQGIYIERNDETAVAARHNI 135 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHh-cCCEEEEEECCHHHHHHHHHhH
Confidence 36899999999999999985 4789999999999887776543
No 235
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=90.17 E-value=0.25 Score=54.21 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=36.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||-|.+++.++... +.+|++||.++..++-|++.
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~ 121 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIY 121 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 45799999999999999999654 57999999999877666543
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=90.13 E-value=0.23 Score=55.52 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=36.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
+...|+|+|||-|++++.|+... +.+|++||.++..++-|++.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~ 151 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKF 151 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 45799999999999999999664 58999999999877766543
No 237
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=90.04 E-value=0.17 Score=55.05 Aligned_cols=40 Identities=8% Similarity=-0.074 Sum_probs=34.2
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
+...|+|+|+|-|++++.++.. +.+|+++|.++..++-|+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar 111 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFI 111 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGT
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHH
Confidence 4579999999999999988866 589999999998776654
No 238
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=90.04 E-value=0.27 Score=55.42 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=34.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|+++..|+..+ +.+|+++|. +..++.|+++
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~ 224 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRR 224 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHH
Confidence 35689999999999999999775 789999999 7766666543
No 239
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.03 E-value=0.31 Score=53.69 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=41.4
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHhhh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSKK 734 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~~k 734 (1101)
.++..... ....|+|.+||.|-++.+++ ..|.+++|||.++..++.|++|-++
T Consensus 227 ~~i~~~~~--~~~~vlD~f~GsGt~~~~a~-~~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 227 RLVRMFSF--VGDVVLDPFAGTGTTLIAAA-RWGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhCC--CCCEEEECCCCCCHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHHH
Confidence 44444442 23489999999999998876 6799999999999998888776543
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=89.71 E-value=0.31 Score=54.72 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=33.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|+|||.|++|.. |. .+.+|+|+|.|+..++.|+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~ 233 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLK 233 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHH
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHH
Confidence 45899999999999999 86 6789999999988776665
No 241
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=89.59 E-value=0.43 Score=49.84 Aligned_cols=42 Identities=17% Similarity=0.066 Sum_probs=35.5
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||-|=|+-.++.. ++.+|+|+|.|+..++-|+.+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~ 92 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSI 92 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHH
Confidence 559999999999999999765 588999999998877666543
No 242
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=89.58 E-value=0.25 Score=51.25 Aligned_cols=36 Identities=14% Similarity=0.261 Sum_probs=29.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.++..|+.. +|+|.++..++.|+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~ 83 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARK 83 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHh
Confidence 458999999999999999854 999999877655543
No 243
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=89.47 E-value=0.21 Score=54.39 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=30.3
Q ss_pred CeEEEEcCccchHhHHHHhcCCCeEEEEeCCcccc
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNT 725 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~ 725 (1101)
..|+|+|||.|+.|..||.. |.+|++||.++...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~ 123 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVA 123 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHH
Confidence 58999999999999999976 77999999998654
No 244
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=89.21 E-value=0.43 Score=55.45 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=41.8
Q ss_pred HHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 678 SQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 678 s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
|.++..+........|+|+|||-|..+..||... +.+|+|+|.++..+..|+.+
T Consensus 235 s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~ 289 (429)
T 1sqg_A 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDN 289 (429)
T ss_dssp HHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHH
T ss_pred HHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence 4455555555556799999999999999999764 47999999999877666543
No 245
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=89.15 E-value=0.39 Score=51.35 Aligned_cols=36 Identities=11% Similarity=0.219 Sum_probs=30.3
Q ss_pred CCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVN 724 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~ 724 (1101)
....|+|+|||.|+++..||.. .+-+|+|+|.++..
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~ 113 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRV 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHH
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHH
Confidence 3568999999999999999964 35699999998753
No 246
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=89.02 E-value=0.4 Score=53.75 Aligned_cols=41 Identities=22% Similarity=0.398 Sum_probs=33.8
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|+++..|+..+ +.+++++|. +..++.|++
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~ 224 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARS 224 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHH
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHH
Confidence 35689999999999999999764 789999998 766665544
No 247
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=88.96 E-value=0.3 Score=53.18 Aligned_cols=31 Identities=23% Similarity=0.361 Sum_probs=28.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQ 722 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~ 722 (1101)
...|+|+|||-|.++..||.. .+|+|||.++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~ 105 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT 105 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHc--CcEEEEECch
Confidence 458999999999999999965 7899999987
No 248
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=88.95 E-value=0.32 Score=57.34 Aligned_cols=54 Identities=19% Similarity=0.195 Sum_probs=41.5
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHHh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.+++.+........|+|+|||-|..+..||... +-.|+|+|.++..+..|++..
T Consensus 91 ~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~ 146 (464)
T 3m6w_A 91 QAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENV 146 (464)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 455555555556799999999999999999653 369999999988776665443
No 249
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=88.85 E-value=0.37 Score=55.29 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=34.2
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.+|..+|.....+|+|||.++..++.|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~ 253 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLA 253 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHH
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 45899999999999999996433599999999987766653
No 250
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=88.62 E-value=0.42 Score=54.78 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=35.0
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..+|.....+|+|||.++..++.|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~ 261 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQ 261 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 346899999999999999996544699999999887766654
No 251
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=88.54 E-value=0.41 Score=56.05 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=41.2
Q ss_pred HHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-C-CeEEEEeCCccccchHHHH
Q psy9966 678 SQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-G-KKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 678 s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-~-~~V~~IE~~~~~~~gA~~r 731 (1101)
|.++..+........|+|+|||-|..+..||... + .+|+|+|.++..+..|+.+
T Consensus 248 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~ 303 (450)
T 2yxl_A 248 SAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDF 303 (450)
T ss_dssp HHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHH
Confidence 3455555555556799999999999999999764 3 7999999998766555443
No 252
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=88.54 E-value=0.66 Score=53.14 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=44.5
Q ss_pred hccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHH
Q psy9966 662 VSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 662 ~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~ 729 (1101)
...|-||+..-+ +.++..+.... ....|+|+|||.|.+|-.+|.. .+.+|+++|.++..++-|+
T Consensus 24 ~~~F~np~~~~n-r~l~~~~l~~~---~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~ 88 (378)
T 2dul_A 24 SPVFYNPRMALN-RDIVVVLLNIL---NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMK 88 (378)
T ss_dssp -CCCCCGGGHHH-HHHHHHHHHHH---CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHH
T ss_pred CCceeCCchHHH-HHHHHHHHHHc---CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 456778875433 33333232222 3458999999999999999987 4578999999988765554
No 253
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=88.41 E-value=0.3 Score=53.60 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=28.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQ 722 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~ 722 (1101)
...|+|+|||-|.++..||.. -+|+|||.++
T Consensus 83 g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~ 113 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT 113 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHc--CCEEEEECch
Confidence 458999999999999999966 6999999987
No 254
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=88.25 E-value=0.44 Score=56.38 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=40.5
Q ss_pred HHHHHHhccC--CCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHHh
Q psy9966 679 QVVAAVTNSC--DSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVRS 732 (1101)
Q Consensus 679 ~~v~~l~~~~--~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r~ 732 (1101)
.+++.+.... ....|+|+|||-|+.+..||... +-.|+|+|.++..+..|+++-
T Consensus 105 ~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~ 162 (479)
T 2frx_A 105 MLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANI 162 (479)
T ss_dssp HHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHH
T ss_pred HHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH
Confidence 3444444433 45689999999999999999764 479999999988776665443
No 255
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=88.22 E-value=0.33 Score=53.99 Aligned_cols=41 Identities=32% Similarity=0.416 Sum_probs=34.1
Q ss_pred CCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++..|+.. ++.+++++|. +..+..|+++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~ 211 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRR 211 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHh
Confidence 458999999999999999976 4889999999 7766666543
No 256
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=88.14 E-value=0.42 Score=53.29 Aligned_cols=53 Identities=21% Similarity=0.196 Sum_probs=39.9
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+++.+........|+|+|||-|+.+..||... +-+|+|+|.++..++.|+++
T Consensus 92 ~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n 146 (309)
T 2b9e_A 92 CLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATL 146 (309)
T ss_dssp GHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH
Confidence 345555554455689999999999999999753 47999999998766555443
No 257
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=88.04 E-value=0.28 Score=55.09 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=30.7
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCcccc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNT 725 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~ 725 (1101)
+...|||+|||.|++++.|+..+ +.+|+++|. +..+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~ 224 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV 224 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH
Confidence 34689999999999999999774 889999998 6544
No 258
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=87.85 E-value=0.47 Score=54.65 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=34.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|.+|..+|.. |..|+|+|.++..++.|++
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~ 254 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQ 254 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred CCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHH
Confidence 458999999999999999964 7779999999987766653
No 259
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=87.20 E-value=0.44 Score=54.06 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCcc
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQV 723 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~ 723 (1101)
.+..+|||+|||.|+++..|+.. ++.+++++|. +.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~ 235 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PH 235 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HH
Confidence 34679999999999999999976 4889999998 44
No 260
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=86.90 E-value=0.35 Score=54.92 Aligned_cols=34 Identities=21% Similarity=0.529 Sum_probs=29.8
Q ss_pred CCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCcc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQV 723 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~ 723 (1101)
+..+|||+|||.|+++..|+.. ++.+++++|. +.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~ 237 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PH 237 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HH
Confidence 4679999999999999999977 4899999998 54
No 261
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=86.62 E-value=0.48 Score=55.70 Aligned_cols=53 Identities=17% Similarity=0.104 Sum_probs=40.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcC--CCeEEEEeCCccccchHHHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH--GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~--~~~V~~IE~~~~~~~gA~~r 731 (1101)
.+++.+........|+|+|||-|..+..||... +-.|+|+|.++..++.|++.
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n 149 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSEN 149 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Confidence 455666555556799999999999999999653 46999999998876665543
No 262
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=86.50 E-value=1.2 Score=47.52 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=24.5
Q ss_pred CCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCC
Q psy9966 7 GNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT 47 (1101)
Q Consensus 7 ~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~ 47 (1101)
+|++|+||||.+.. .. .. ..++|+||+|+||...
T Consensus 181 ~g~~i~ysgDt~~~---~~---~~-~~~~d~li~e~t~~~~ 214 (280)
T 2e7y_A 181 HKKVLTISGDSLAL---DP---EE-IRGTELLIHECTFLDA 214 (280)
T ss_dssp EEEEEEECCSCSSC---CH---HH-HTTCSCEEEECCBC--
T ss_pred cCCEEEEECCCChH---HH---Hh-hcCCCEEEEeCCcCCh
Confidence 56899999999865 11 11 2479999999999865
No 263
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=86.25 E-value=0.58 Score=53.60 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..+|.....+|+|+|.++..++.|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~ 258 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKE 258 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 346899999999999999996523499999999987766653
No 264
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=86.00 E-value=0.48 Score=54.06 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=35.3
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
....|+|+|||.|.++..+|.. +.+|+|+|.++..++.|+.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~ 249 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEE 249 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHH
Confidence 3458999999999999999977 8899999999987766653
No 265
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=85.94 E-value=0.31 Score=52.30 Aligned_cols=44 Identities=9% Similarity=0.398 Sum_probs=32.3
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT 47 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~ 47 (1101)
|+|+.++++++||||....++.... .+...++|+||+|+||...
T Consensus 150 ~~i~~~~~~i~~~GDt~~~~~~~~~--~l~~~~~Dlli~e~t~~~~ 193 (258)
T 3g1p_A 150 YLLETAHSRVAWLSDTAGLPEKTLK--FLRNNQPQVMVMDCSHPPR 193 (258)
T ss_dssp EEEECSSCEEEEECSCSSCCHHHHH--HHHHTCCSEEEEECCBSSC
T ss_pred EEEEeCCcEEEEECCCCCCCHHHHH--HHHhCCCCEEEEeCCCCCc
Confidence 7889899999999999865432221 1111479999999999754
No 266
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=85.87 E-value=0.57 Score=53.05 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=30.5
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCcccc
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNT 725 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~ 725 (1101)
+...|||+|||.|++++.|+..+ +.+++++|. +..+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~ 245 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI 245 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH
Confidence 45699999999999999999764 789999998 5443
No 267
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=85.36 E-value=0.57 Score=50.99 Aligned_cols=42 Identities=17% Similarity=0.193 Sum_probs=30.3
Q ss_pred CCeEEEEcCccchHhHH----HHhc-CCCeE--EEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTI----LALQ-HGKKT--LSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~----La~~-~~~~V--~~IE~~~~~~~gA~~r 731 (1101)
...|+|+|||.|+++.. ++.. ++..| +|||.++..++.|+++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~ 101 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKEL 101 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHH
Confidence 34899999999986643 3322 46655 9999998877666544
No 268
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=84.40 E-value=0.64 Score=52.89 Aligned_cols=41 Identities=24% Similarity=0.197 Sum_probs=34.4
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~r 731 (1101)
...|+|+| |.|.++..|+... +.+|+|+|.++..++.|++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~ 214 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKA 214 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 46899999 9999999999753 47999999999877766543
No 269
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=83.79 E-value=0.93 Score=52.17 Aligned_cols=56 Identities=16% Similarity=0.087 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CC--------------------------------------CeE
Q psy9966 675 QVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HG--------------------------------------KKT 715 (1101)
Q Consensus 675 ~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~--------------------------------------~~V 715 (1101)
+.+|+.+-.++.-.+...|+|.|||.|.+...+|.. .+ .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 456666666666555678999999999998888753 22 569
Q ss_pred EEEeCCccccchHHH
Q psy9966 716 LSLDYNQVNTHGAAV 730 (1101)
Q Consensus 716 ~~IE~~~~~~~gA~~ 730 (1101)
+|+|.++..++.|+.
T Consensus 267 ~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQ 281 (393)
T ss_dssp EEEESCHHHHHHHHH
T ss_pred EEEECCHHHHHHHHH
Confidence 999999988877754
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=83.68 E-value=0.84 Score=50.66 Aligned_cols=29 Identities=24% Similarity=0.273 Sum_probs=26.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeC
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDY 720 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~ 720 (1101)
...|||+|||-|.++..||-. -+|+|||.
T Consensus 83 g~~VLDlGcG~G~~s~~la~~--~~V~gvD~ 111 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL--KNVREVKG 111 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS--TTEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhc--CCEEEEec
Confidence 468999999999999999965 48999998
No 271
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=83.62 E-value=1.4 Score=47.73 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=52.4
Q ss_pred cchHHHHHHHhhhccCccccchhhccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEE
Q psy9966 639 ITVDELFSKLQARKCGLVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSL 718 (1101)
Q Consensus 639 ~~~~~l~~~l~~~~~~~~~~~~~~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~I 718 (1101)
.+.+.++..|+.... ..-+....+.|-+- ..|-.+-..+........|+|+|||.|=|+-.+. .+..|+|+
T Consensus 62 ~~~~~~l~~~~~~d~-----~~~l~~H~STrerL--p~ld~fY~~i~~~~~p~~VLDlGCG~gpLal~~~--~~~~y~a~ 132 (253)
T 3frh_A 62 ESLKAAAAALSAGDV-----KKALSLHASTKERL--AELDTLYDFIFSAETPRRVLDIACGLNPLALYER--GIASVWGC 132 (253)
T ss_dssp HHHHHHHHHHHTTCH-----HHHHTTSHHHHHHG--GGHHHHHHHHTSSCCCSEEEEETCTTTHHHHHHT--TCSEEEEE
T ss_pred ccHHHHHHHhccCCH-----HHHHhhCCCHHHHh--hhHHHHHHHHhcCCCCCeEEEecCCccHHHHHhc--cCCeEEEE
Confidence 556777777763222 12233333333211 1222343333443447799999999999998887 89999999
Q ss_pred eCCccccchHHHH
Q psy9966 719 DYNQVNTHGAAVR 731 (1101)
Q Consensus 719 E~~~~~~~gA~~r 731 (1101)
|.++..++-|...
T Consensus 133 DId~~~i~~ar~~ 145 (253)
T 3frh_A 133 DIHQGLGDVITPF 145 (253)
T ss_dssp ESBHHHHHHHHHH
T ss_pred eCCHHHHHHHHHH
Confidence 9998877666543
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=83.47 E-value=0.62 Score=52.39 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=28.4
Q ss_pred CCCeEEEEcCccchHhHHHHhcC-CCeEEEEeC
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQH-GKKTLSLDY 720 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~ 720 (1101)
+...|||+|||.|++++.|+..+ +.+++++|.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~ 225 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ 225 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc
Confidence 34689999999999999999774 789999997
No 273
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=83.37 E-value=0.94 Score=51.96 Aligned_cols=55 Identities=15% Similarity=0.052 Sum_probs=41.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CC--------------------------------------CeEE
Q psy9966 676 VMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HG--------------------------------------KKTL 716 (1101)
Q Consensus 676 ~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~--------------------------------------~~V~ 716 (1101)
.+++.+-.++...+...|+|.|||.|.+...+|.. .+ .+|+
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 45666656665555678999999999999888754 12 5799
Q ss_pred EEeCCccccchHHH
Q psy9966 717 SLDYNQVNTHGAAV 730 (1101)
Q Consensus 717 ~IE~~~~~~~gA~~ 730 (1101)
|+|.++..++.|+.
T Consensus 262 GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 262 GYDIDEESIDIARE 275 (385)
T ss_dssp EEESCHHHHHHHHH
T ss_pred EEECCHHHHHHHHH
Confidence 99999988777754
No 274
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=82.73 E-value=1.3 Score=47.46 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=31.0
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT 47 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~ 47 (1101)
|+|+.++++|+||||....+. ... + ..++|+||+|+||...
T Consensus 165 ~~i~~~~~~i~~~GD~~~~~~-~~~---~-~~~~d~li~e~~~~~~ 205 (268)
T 1zkp_A 165 MRITAGNDIVVYSADSSYIPE-FIP---F-TKDADLFICECNMYAH 205 (268)
T ss_dssp EEEEETTEEEEECCSCCCCTT-HHH---H-HTTCSEEEEECCBCTT
T ss_pred EEEEECCeEEEEeCCCCCCHH-HHH---H-HcCCCEEEEECCCCcc
Confidence 788999999999999987432 111 1 1479999999999754
No 275
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=81.88 E-value=1.1 Score=51.04 Aligned_cols=43 Identities=19% Similarity=0.282 Sum_probs=35.9
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r 731 (1101)
+...|+|+|+|-|++++.++.....+|++||.++..++-|++.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~ 230 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKY 230 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 4679999999999999988755457899999999888777543
No 276
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=81.73 E-value=1.4 Score=49.67 Aligned_cols=40 Identities=28% Similarity=0.242 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchH
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA 728 (1101)
.+...|||+|||.|+++..|+.. ++++++..|. +..++.|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a 218 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTA 218 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHH
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHH
Confidence 34568999999999999999977 5899999997 4444444
No 277
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=81.38 E-value=2.2 Score=45.85 Aligned_cols=56 Identities=20% Similarity=0.258 Sum_probs=45.8
Q ss_pred ccCCCHHHHHHHHHHhCCCEEEEecCCh-----hHHHHHHHHHHHHcCC--ceeecCCCCEEEE
Q psy9966 228 SAHADAKGIMQLIQYCEPKNVLLVHGEA-----SKMVFLKEKIKQEFNL--DCFMPANGESCFV 284 (1101)
Q Consensus 228 SaHAD~~~l~~~I~~l~Pk~VILVHGe~-----~~m~~Lk~~L~~e~gi--~v~~P~nGe~v~l 284 (1101)
..|.+.++..++++.++|+.+|++|=.. ...+.+++.+.+ .|+ ++.+|+.||++++
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKG-NNIESHVAVPEDGETITL 264 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHH-TTCTTTEECCCTTCEEEC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHH-cCCCCcEEecCCCCEEeC
Confidence 5799999999999999999999999753 345667766654 455 7999999999875
No 278
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=81.13 E-value=1.3 Score=49.68 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCC
Q psy9966 688 CDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYN 721 (1101)
Q Consensus 688 ~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~ 721 (1101)
.+...|||+|||.|+++..|+.. ++.+++++|..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~ 217 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA 217 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH
Confidence 34569999999999999999976 47899999984
No 279
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=80.40 E-value=1.5 Score=48.19 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=37.9
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
++++.+.-. ....+||.++|-|.-++.|+.. +.+|+|||.++.-++.|+
T Consensus 13 e~le~L~~~-~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~ 61 (285)
T 1wg8_A 13 EALDLLAVR-PGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAK 61 (285)
T ss_dssp HHHHHHTCC-TTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred HHHHhhCCC-CCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHH
Confidence 455555432 2348999999999999999977 889999999988665554
No 280
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=80.36 E-value=2.2 Score=48.17 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=48.9
Q ss_pred ccCCCHHHHHHHHHHhCCCEEEEecCChh-----HHHHHHHHHHHH-----cCCceeecCCCCEEEEecCce
Q psy9966 228 SAHADAKGIMQLIQYCEPKNVLLVHGEAS-----KMVFLKEKIKQE-----FNLDCFMPANGESCFVQTDMK 289 (1101)
Q Consensus 228 SaHAD~~~l~~~I~~l~Pk~VILVHGe~~-----~m~~Lk~~L~~e-----~gi~v~~P~nGe~v~l~~~~~ 289 (1101)
++|.+.++..++++.++|+.+|++|.... ....+++.+... ++.++++++.|++++++.+..
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~~d~~ 328 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKD 328 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTTT
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEecCCCC
Confidence 57999999999999999999999997532 244566666532 356899999999999986654
No 281
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=80.03 E-value=0.65 Score=50.67 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=26.6
Q ss_pred CCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCC
Q psy9966 7 GNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT 47 (1101)
Q Consensus 7 ~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~ 47 (1101)
+|++|+||||.+..+. ... . ..++|+||+||||+..
T Consensus 204 ~g~~i~~sgDt~~~~~-~~~---~-~~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 204 PGKALAIFGDTGPCDA-ALD---L-AKGVDVMVHEATLDIT 239 (306)
T ss_dssp CCCEEEECCSCBSCST-HHH---H-HTTCSEEEEECCBCGG
T ss_pred CCCEEEEeCCCCCHHH-HHH---H-hcCCCEEEEECcCChh
Confidence 5789999999997541 111 1 2479999999999864
No 282
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=79.98 E-value=1.6 Score=50.05 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CC--------------------------------------CeE
Q psy9966 675 QVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HG--------------------------------------KKT 715 (1101)
Q Consensus 675 ~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~--------------------------------------~~V 715 (1101)
+.+|+.+-.++.-.+...|+|.|||.|.+.-..|.. .+ .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 456666666666555678999999999999888753 22 569
Q ss_pred EEEeCCccccchHHH
Q psy9966 716 LSLDYNQVNTHGAAV 730 (1101)
Q Consensus 716 ~~IE~~~~~~~gA~~ 730 (1101)
+|+|.++..++.|+.
T Consensus 260 ~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 260 SGFDFDGRMVEIARK 274 (384)
T ss_dssp EEEESCHHHHHHHHH
T ss_pred EEEECCHHHHHHHHH
Confidence 999999988777753
No 283
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=79.84 E-value=2 Score=46.16 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=40.1
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHhh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSK 733 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~~ 733 (1101)
.+|...+.. ...|+|..||.|-.+.+.. +.|.+++|+|.++..++.|++|-+
T Consensus 204 ~~i~~~~~~--~~~vlD~f~GsGtt~~~a~-~~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 204 RIIRASSNP--NDLVLDCFMGSGTTAIVAK-KLGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHCCT--TCEEEESSCTTCHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHhCCC--CCEEEECCCCCCHHHHHHH-HcCCeEEEEeCCHHHHHHHHHHHH
Confidence 344444433 3489999999999987755 689999999999998888876653
No 284
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=79.34 E-value=1.5 Score=54.35 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=33.0
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|+|||.|.+|-.+|.....+|++||.++..++.|+
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~ 579 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAE 579 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 4589999999999999988643446999999988776664
No 285
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=78.90 E-value=0.72 Score=50.41 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=36.4
Q ss_pred CCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCccccchHHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNTHGAAVR 731 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~~gA~~r 731 (1101)
....|+|+|||.|=|+-.++.. .+.+|+++|.|+..++-+...
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~ 175 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEA 175 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHH
Confidence 3779999999999999999877 688999999998877655543
No 286
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=78.50 E-value=0.98 Score=49.46 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=32.6
Q ss_pred CCeEEEEcCccch----HhHHHHhcC-----CCeEEEEeCCccccchHHH
Q psy9966 690 SSHIIDLGGGQGY----LSTILALQH-----GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 690 ~~~vVD~GsGkGy----Lsr~La~~~-----~~~V~~IE~~~~~~~gA~~ 730 (1101)
...|+|+|||.|. |+..|+... +.+|+|+|.++..++.|++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~ 155 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARS 155 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHh
Confidence 4589999999998 777777442 4699999999988877754
No 287
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=77.89 E-value=0.81 Score=50.33 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=26.7
Q ss_pred CCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCCC
Q psy9966 7 GNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATT 47 (1101)
Q Consensus 7 ~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~~ 47 (1101)
+|++|+||||.+..+ ... .. ..++|+||+||||+..
T Consensus 202 ~g~~i~~sgDt~~~~-~~~---~~-~~~~D~li~E~t~~~~ 237 (320)
T 1y44_A 202 KGRSVVFSGDTRVSD-KLK---EL-ARDCDVMVHEATFAKE 237 (320)
T ss_dssp CCCEEEECCSCBCCH-HHH---HH-TTTCSEEEEECCBCTT
T ss_pred CCCEEEEeCCCCCHH-HHH---HH-hCCCCEEEEeccCCcc
Confidence 578999999998653 111 11 2479999999999864
No 288
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=76.87 E-value=2.8 Score=47.58 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=30.7
Q ss_pred CCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCcccc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNT 725 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~ 725 (1101)
...|||+|.|.|-|++.|+... ..+|++||.+..++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~ 95 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY 95 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH
Confidence 3589999999999999999643 57899999997654
No 289
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=76.41 E-value=2.9 Score=47.65 Aligned_cols=61 Identities=10% Similarity=0.112 Sum_probs=48.0
Q ss_pred ccCCCHHHHHHHHHHhCCCEEEEecCCh-----hHHHHHHHHHHHH-----cCCceeecCCCCEEEEecCc
Q psy9966 228 SAHADAKGIMQLIQYCEPKNVLLVHGEA-----SKMVFLKEKIKQE-----FNLDCFMPANGESCFVQTDM 288 (1101)
Q Consensus 228 SaHAD~~~l~~~I~~l~Pk~VILVHGe~-----~~m~~Lk~~L~~e-----~gi~v~~P~nGe~v~l~~~~ 288 (1101)
.+|.+.++..++++.++|+.+|++|... .....+++.+... ++.++++++.|++++++.+.
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~d~ 352 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYPTDK 352 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEETTTT
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEecCCC
Confidence 5699999999999999999999999653 2235566656532 35688999999999997654
No 290
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=76.05 E-value=1.6 Score=50.77 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=41.9
Q ss_pred hccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc--------------CCCeEEEEeCCccccch
Q psy9966 662 VSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ--------------HGKKTLSLDYNQVNTHG 727 (1101)
Q Consensus 662 ~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~--------------~~~~V~~IE~~~~~~~g 727 (1101)
.-++.+|+. ++.++..+........|+|.|||.|.+...++.. .+.+|+|+|.++....-
T Consensus 150 ~G~fyTP~~------v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~l 223 (445)
T 2okc_A 150 AGQYFTPRP------LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTL 223 (445)
T ss_dssp CGGGCCCHH------HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHH
T ss_pred CCcccCcHH------HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHH
Confidence 345556653 2334444444444558999999999998887743 35789999999876655
Q ss_pred HH
Q psy9966 728 AA 729 (1101)
Q Consensus 728 A~ 729 (1101)
|+
T Consensus 224 A~ 225 (445)
T 2okc_A 224 AS 225 (445)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 291
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=70.34 E-value=3.7 Score=47.21 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=33.4
Q ss_pred CCeEEEEcCccchHhHHHHhcC-C-CeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQH-G-KKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~-~-~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|+|||.|.+|-.+|... | .+|+++|.|+..++.|+
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~ 94 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK 94 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3589999999999999999763 5 68999999988765554
No 292
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=70.03 E-value=5.2 Score=42.55 Aligned_cols=56 Identities=18% Similarity=0.177 Sum_probs=44.3
Q ss_pred ccCCCHHHHHHHHHHhCCCEEEEecCCh-hHHHHHHHHHHHHcCCceeecCCCCEEE
Q psy9966 228 SAHADAKGIMQLIQYCEPKNVLLVHGEA-SKMVFLKEKIKQEFNLDCFMPANGESCF 283 (1101)
Q Consensus 228 SaHAD~~~l~~~I~~l~Pk~VILVHGe~-~~m~~Lk~~L~~e~gi~v~~P~nGe~v~ 283 (1101)
.+|.+.++..++++..+|+++|+.|-.+ .....+...+++.++.++.++..|++++
T Consensus 211 ~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~~~~~~~~~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 211 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFSGHITLAHSGYVWN 267 (268)
T ss_dssp GTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHHHHTTCCSEEEECCTTCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHHHHHHHHhCCCCEEEEeCCcccc
Confidence 4599999999999999999999999654 2234455566666777899999998874
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=70.03 E-value=3.4 Score=43.22 Aligned_cols=40 Identities=18% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHH
Q psy9966 689 DSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~ 730 (1101)
+.+.|++||+ ||=+-.+|...+-+|++||.|+...+.|+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~ 69 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKA 69 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 3568999999 586666775347899999999987766643
No 294
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=69.78 E-value=3.9 Score=47.31 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=28.2
Q ss_pred CCeEEEEcCc------cchHhHHHHhc--CCCeEEEEeCCcc
Q psy9966 690 SSHIIDLGGG------QGYLSTILALQ--HGKKTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsG------kGyLsr~La~~--~~~~V~~IE~~~~ 723 (1101)
...|+|+||| .|..+..++.. ++.+|+|||.++.
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~ 258 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDK 258 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHH
Confidence 4589999999 67777777765 4889999999986
No 295
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=67.84 E-value=0.99 Score=50.44 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=29.3
Q ss_pred EEEE--ECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCC
Q psy9966 2 FQVK--VGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYAT 46 (1101)
Q Consensus 2 f~Ie--~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~ 46 (1101)
|+|+ .+|++|+|+||.+.-++..+.. ..++|+||+|+||..
T Consensus 185 y~i~~~~~g~~i~y~~Dt~~~~~~~~~~----~~~~D~li~eat~~~ 227 (321)
T 3jxp_A 185 LMVEDTRTGGKLFYAPGLGQVDEKLLAM----MHGADCLLVDGTLWE 227 (321)
T ss_dssp EEEEETTTCCEEEEESSCCCCCHHHHHH----HHHCSEEEEECCCSS
T ss_pred EEEEecCCCcEEEEECCCCCCCHHHHHH----hcCCCEEEEeCCCCC
Confidence 6788 7899999999987432222111 136899999999854
No 296
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=65.45 E-value=6.2 Score=41.29 Aligned_cols=39 Identities=15% Similarity=0.105 Sum_probs=28.1
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITEST 43 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~EST 43 (1101)
|+|+.+|++|+|+||-...+.... ...+ .++|++|+|+.
T Consensus 109 ~~i~~~g~~i~~~GDt~~~~~~~~-~~~~--~~~Dvlil~~g 147 (220)
T 1vjn_A 109 FVFEGEGIKVCHLGDLGHVLTPAQ-VEEI--GEIDVLLVPVG 147 (220)
T ss_dssp EEEEETTEEEEECTTCCSCCCHHH-HHHH--CCCSEEEEECC
T ss_pred EEEEECCeEEEEeCCCCCcchHHH-HHhh--CCCCEEEEcCC
Confidence 789999999999999987542100 0111 37999999984
No 297
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=63.71 E-value=13 Score=39.47 Aligned_cols=58 Identities=16% Similarity=0.252 Sum_probs=44.8
Q ss_pred cccCCCHHHHHHHHHHhCCCEEEEecCChhH---HHHHHHHHHHHc-CCceeecCCCCEEEE
Q psy9966 227 FSAHADAKGIMQLIQYCEPKNVLLVHGEASK---MVFLKEKIKQEF-NLDCFMPANGESCFV 284 (1101)
Q Consensus 227 fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~---m~~Lk~~L~~e~-gi~v~~P~nGe~v~l 284 (1101)
-.+|.+.++..++++.++|+++|++|=.+.. ...+.+.+++.+ +.++.++..|++++|
T Consensus 219 ~~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 219 YKNHAAIDEVMESVKAAGVKKVILYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp --CCCBHHHHHHHHHHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeecCcCcchHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 3589999999999999999999999987632 344445555555 568999999998864
No 298
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=60.82 E-value=7.4 Score=48.12 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc-------------------------------------------C
Q psy9966 675 QVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-------------------------------------------H 711 (1101)
Q Consensus 675 ~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-------------------------------------------~ 711 (1101)
+.+|+.+-.++.-.+...|+|.|||.|-+.-..|.. .
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 356666666665555568999999999998887753 1
Q ss_pred CCeEEEEeCCccccchHHH
Q psy9966 712 GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 712 ~~~V~~IE~~~~~~~gA~~ 730 (1101)
..+|+|+|.++..+..|+.
T Consensus 256 ~~~i~G~Did~~av~~A~~ 274 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRART 274 (703)
T ss_dssp CCCEEEEESCHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHH
Confidence 2589999999998888864
No 299
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=57.68 E-value=19 Score=39.17 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=47.3
Q ss_pred cccCCCHHHHHHHHHHhCCCEEEEecCChh----HHHHHHHHHHHHcCCceeecCCCCEEEEecC
Q psy9966 227 FSAHADAKGIMQLIQYCEPKNVLLVHGEAS----KMVFLKEKIKQEFNLDCFMPANGESCFVQTD 287 (1101)
Q Consensus 227 fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~----~m~~Lk~~L~~e~gi~v~~P~nGe~v~l~~~ 287 (1101)
-.+|.+.++..++++..+|+++|++|=..+ .+..+.+.+.+.+. ++.++..|++++|+.+
T Consensus 244 ~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~-~~~~a~dg~~~~l~~~ 307 (320)
T 1y44_A 244 DYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP-NSVAAYDFLEVNVPRG 307 (320)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS-SEEECCTTCEEECCCC
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCC-CcEeccCCCEEEecch
Confidence 467999999999999999999999997542 23445555665554 6899999999998643
No 300
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=57.31 E-value=23 Score=37.14 Aligned_cols=36 Identities=11% Similarity=0.207 Sum_probs=28.0
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWIDKCRPDLLITEST 43 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~EST 43 (1101)
|+|+.+|.+|+|+||-...++ + ..+ .++|++|+++.
T Consensus 148 ~~i~~~g~~i~~~GDt~~~~~--~--~~l--~~~Dv~il~~~ 183 (235)
T 3kl7_A 148 YILTFDGLRVYIAGDTEDIPE--M--KDL--KDIDIAFLPVN 183 (235)
T ss_dssp EEEEETTEEEEECCSCCSCGG--G--GGC--CSCSEEEEECC
T ss_pred EEEEeCCeEEEEECCCCchhh--H--Hhh--cCCCEEEECCC
Confidence 789999999999999886542 1 122 37999999985
No 301
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=56.13 E-value=7.2 Score=47.59 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.1
Q ss_pred CCeEEEEcCccchHhHHHHh---cCCC--eEEEEeCCcc
Q psy9966 690 SSHIIDLGGGQGYLSTILAL---QHGK--KTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~---~~~~--~V~~IE~~~~ 723 (1101)
...|+|+|||.|=|+.+-+. ..+. +|+|||.|+.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 45789999999999655442 2343 7899999973
No 302
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=55.76 E-value=13 Score=46.58 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=33.9
Q ss_pred CCeEEEEcCccchHhHHHHhcCC----CeEEEEeCCccccchHH
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHG----KKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~----~~V~~IE~~~~~~~gA~ 729 (1101)
...|+|.|||.|.+.-.++...+ .+++|+|.++.....|+
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK 365 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLS 365 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHH
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHH
Confidence 45899999999999999886553 68999999999887774
No 303
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=51.54 E-value=14 Score=45.43 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=26.4
Q ss_pred CCeEEEEcCccchHhHHH--Hhc-CC-----------CeEEEEeCCcccc
Q psy9966 690 SSHIIDLGGGQGYLSTIL--ALQ-HG-----------KKTLSLDYNQVNT 725 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~L--a~~-~~-----------~~V~~IE~~~~~~ 725 (1101)
...|+|+|||.|=|+.+. |.. .| .+|+|||.|+.-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~ 459 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI 459 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH
Confidence 457999999999998643 222 23 4999999997533
No 304
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=51.13 E-value=23 Score=38.16 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=42.9
Q ss_pred cccCCCHHHHHHHHHHhCCCEEEEecCChhH----HHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 227 FSAHADAKGIMQLIQYCEPKNVLLVHGEASK----MVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 227 fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~----m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
-.+|.+.++..++.+..+|+++|++|=.++. ...+.+.+.+.+. ++.++..|.+++|
T Consensus 246 ~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~~-~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 246 SRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFP-ATELANDFTVFNV 306 (306)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTCS-CEEECCTTCEEEC
T ss_pred hcCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhCC-CcEEcccccEeeC
Confidence 3579999999999999999999999976532 2334444444443 6889999998864
No 305
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=50.50 E-value=10 Score=45.44 Aligned_cols=62 Identities=8% Similarity=0.022 Sum_probs=39.4
Q ss_pred hccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcC-------------------CCeEEEEeCCc
Q psy9966 662 VSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQH-------------------GKKTLSLDYNQ 722 (1101)
Q Consensus 662 ~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~-------------------~~~V~~IE~~~ 722 (1101)
.-++.+|+. -++.|+ .+........|+|.|||.|.+...++... ...++|+|.++
T Consensus 148 ~G~fyTP~~--iv~~mv----~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~ 221 (541)
T 2ar0_A 148 AGQYFTPRP--LIKTII----HLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP 221 (541)
T ss_dssp --CCCCCHH--HHHHHH----HHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH
T ss_pred CCeeeCCHH--HHHHHH----HHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCH
Confidence 456667763 223333 33333344589999999999877666321 24899999998
Q ss_pred cccchHH
Q psy9966 723 VNTHGAA 729 (1101)
Q Consensus 723 ~~~~gA~ 729 (1101)
....-|+
T Consensus 222 ~~~~lA~ 228 (541)
T 2ar0_A 222 GTRRLAL 228 (541)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8665554
No 306
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=48.46 E-value=18 Score=40.97 Aligned_cols=36 Identities=25% Similarity=0.233 Sum_probs=23.9
Q ss_pred CEEEEEEcCCCCCCCCCCCCcccC-CCCCcEEEEcCCCCCC
Q psy9966 8 NQSIVYTGDYNMTPDRHLGAAWID-KCRPDLLITESTYATT 47 (1101)
Q Consensus 8 g~rIlYTGDf~~~~dr~L~~a~ip-~~~~DvLI~ESTYg~~ 47 (1101)
|.+|+|+||-.. .+... .+. ..++|+||+|+||...
T Consensus 243 g~~v~~~GDT~~---~~~~~-~~~~~~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 243 GRKICILGDCSG---VVGDG-GVKLCFEADLLIHEATLDDA 279 (368)
T ss_dssp CCEEEEECSCSE---ECSSH-HHHHTTTCSEEEEECCSCGG
T ss_pred ceEEEEEecCCc---ccchh-HHHHhcCCCEEEEecCCChH
Confidence 789999999442 11110 011 2479999999999864
No 307
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=48.13 E-value=25 Score=38.04 Aligned_cols=56 Identities=18% Similarity=0.146 Sum_probs=45.0
Q ss_pred cccCCCHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEEe
Q psy9966 227 FSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFVQ 285 (1101)
Q Consensus 227 fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l~ 285 (1101)
-.+|.+.++..++++.++|+++|++|=....- . +.+.+++...+.....|.+++|+
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~--~-~~~~~~~~~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVPLD--Y-ETVMRETPHHVEPGYDGLRFEVA 292 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCC--H-HHHHHHSCTTEEECCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCC--H-HHHHhhcCCCcEEeeCCcEEEec
Confidence 46899999999999999999999999765421 1 23455667789999999999875
No 308
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=47.31 E-value=16 Score=43.64 Aligned_cols=76 Identities=12% Similarity=0.068 Sum_probs=45.1
Q ss_pred hHHHHHHHhhhccCccccchhhccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc----------
Q psy9966 641 VDELFSKLQARKCGLVVESAKVSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ---------- 710 (1101)
Q Consensus 641 ~~~l~~~l~~~~~~~~~~~~~~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~---------- 710 (1101)
.|.|+..+.....+ +.-++.+|+ +-|+.|+++ ..... ..|+|.|||.|.+-..++..
T Consensus 209 yE~ll~~~a~~~~k------~~G~fyTP~--~Vv~lmv~l----l~p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~ 275 (544)
T 3khk_A 209 YEYFLGQFALAEGK------QGGQYYTPK--SIVTLIVEM----LEPYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHY 275 (544)
T ss_dssp HHHHHHHHHHTTTC------CSTTTCCCH--HHHHHHHHH----HCCCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhCc------cCCeEeCCH--HHHHHHHHH----HhcCC-CeEeCcccCcCcHHHHHHHHHHHhcccccc
Confidence 44555554433321 245666775 233333333 33332 38999999999886655421
Q ss_pred ------CCCeEEEEeCCccccchHH
Q psy9966 711 ------HGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 711 ------~~~~V~~IE~~~~~~~gA~ 729 (1101)
....++|+|.++....-|+
T Consensus 276 ~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 276 NASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp CHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred chHHHhhhceEEEEeCCHHHHHHHH
Confidence 1568999999988665553
No 309
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=46.22 E-value=8.3 Score=45.87 Aligned_cols=83 Identities=18% Similarity=0.208 Sum_probs=49.3
Q ss_pred EEEEECCEEEEEEcCCCCCCCC--CCCCcccCCCCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCCeEEEeecc
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDR--HLGAAWIDKCRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFA 79 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr--~L~~a~ip~~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG~VLIPvFA 79 (1101)
++|+.++.+++||||....... .+. .. ..++|+|++- -.|. ++.....+|++.|. ...++| +
T Consensus 189 l~i~~~~~~iLftGD~~~~~~~e~~l~-~~--~~~~DvLkv~-HHG~----S~~s~s~~fl~~v~-----P~~aii---S 252 (547)
T 2bib_A 189 SVVKVNGKKIYLGGDLDNVHGAEDKYG-PL--IGKVDLMKFN-HHHD----TNKSNTKDFIKNLS-----PSLIVQ---T 252 (547)
T ss_dssp EEEEETTEEEEECTTCCSTTSHHHHHH-HH--HCCCSEEECT-TTTB----CSSSSCHHHHHHHC-----CSEEEE---S
T ss_pred EEEEECCEEEEecCCccchhhhhhhhc-cc--ccceeEEEec-cccC----cccCChHHHHHhcC-----CcEEEE---c
Confidence 6889999999999999875221 111 00 2479999962 1220 22223356777653 334444 4
Q ss_pred hhH-------HHHHHHHHHHHHHhcCCCccEEEe
Q psy9966 80 LGR-------AQELCILLETYWERMNLQAPIYFA 106 (1101)
Q Consensus 80 lGR-------aQELl~iL~~~w~~~~~~vPIy~~ 106 (1101)
.|+ .+|++..|.+. ++++|-.
T Consensus 253 ~g~~n~~~hP~~evl~~l~~~------g~~v~~T 280 (547)
T 2bib_A 253 SDSLPWKNGVDSEYVNWLKER------GIERINA 280 (547)
T ss_dssp BSSCSBSSSBCHHHHHHHHTT------TCEEEEC
T ss_pred CCcccccCCCCHHHHHHHHhC------CceEEEe
Confidence 455 67888777654 4667653
No 310
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=45.80 E-value=15 Score=41.92 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCeEEEEcCccchHhHHHHhcCCCeEEEEeCCc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQ 722 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~ 722 (1101)
...+||+||+-|.-+..|+ +.|.+|+|||..+
T Consensus 212 G~~vlDLGAaPGGWT~~l~-~rg~~V~aVD~~~ 243 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLV-KRNMWVYSVDNGP 243 (375)
T ss_dssp TCEEEEETCTTCHHHHHHH-HTTCEEEEECSSC
T ss_pred CCEEEEeCcCCCHHHHHHH-HCCCEEEEEEhhh
Confidence 3489999999999999998 5588999999653
No 311
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=45.01 E-value=17 Score=39.72 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEe
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLD 719 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE 719 (1101)
|.++... ........|||+|||-|.-++.++...+. .|.|+|
T Consensus 63 L~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~d 105 (277)
T 3evf_A 63 LRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFT 105 (277)
T ss_dssp HHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEEC
T ss_pred HHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEE
No 312
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=43.87 E-value=19 Score=34.41 Aligned_cols=65 Identities=9% Similarity=0.138 Sum_probs=46.4
Q ss_pred CCCCCcEEEEcCCCCCCCCCChhHH-----HHHHHHHHHHHHhCCCeEEEeecchhHHHHHHHHHHHHHH
Q psy9966 31 DKCRPDLLITESTYATTIRDSKRCR-----ERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWE 95 (1101)
Q Consensus 31 p~~~~DvLI~ESTYg~~~~~~r~~r-----E~~f~~~I~etl~~GG~VLIPvFAlGRaQELl~iL~~~w~ 95 (1101)
+....|++++...+........... -..+++.+...++.||.+++-.+......++...+..+|+
T Consensus 85 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 154 (180)
T 1ej0_A 85 GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFT 154 (180)
T ss_dssp TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHEE
T ss_pred CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhhh
Confidence 3457899999877543222111111 1577888888999999999999888888888888877764
No 313
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=42.55 E-value=17 Score=39.93 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=23.8
Q ss_pred CCeEEEEcCcc------chHhHHHHhcC--CCeEEEEeCCcc
Q psy9966 690 SSHIIDLGGGQ------GYLSTILALQH--GKKTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsGk------GyLsr~La~~~--~~~V~~IE~~~~ 723 (1101)
...|+|+|||. |. ..++... +.+|+|||.++.
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~ 103 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF 103 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC
Confidence 45899999944 55 4455433 579999999987
No 314
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=41.12 E-value=26 Score=39.56 Aligned_cols=61 Identities=11% Similarity=0.191 Sum_probs=40.2
Q ss_pred ccCCCHHHHHHHHHHhCCCEEEEecCChh-------------HHHHHHHHHHHHcC-CceeecCCCCEEEEecCc
Q psy9966 228 SAHADAKGIMQLIQYCEPKNVLLVHGEAS-------------KMVFLKEKIKQEFN-LDCFMPANGESCFVQTDM 288 (1101)
Q Consensus 228 SaHAD~~~l~~~I~~l~Pk~VILVHGe~~-------------~m~~Lk~~L~~e~g-i~v~~P~nGe~v~l~~~~ 288 (1101)
.+|....+..++.+..+++++||+|=.+. .+..+.+..++.+. .++++++.|++++|+...
T Consensus 287 ~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~~~~ 361 (368)
T 3zwf_A 287 HGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIPIKK 361 (368)
T ss_dssp TTCCCHHHHHHHHHHTTCSEEEEECBCCCC---------------------------CEEEECCTTCEEECCC--
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcCCCceEEecCCcEEEeecCc
Confidence 56999999999999999999999997643 23455555555553 479999999999997643
No 315
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=40.80 E-value=16 Score=39.48 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCCCCCCCCcccCCCCCcEEEEcCCCCC
Q psy9966 10 SIVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYAT 46 (1101)
Q Consensus 10 rIlYTGDf~~~~dr~L~~a~ip~~~~DvLI~ESTYg~ 46 (1101)
+++||||...-++..... ..++|+||.|+|+..
T Consensus 203 ~~~y~gDt~~~~~~~~~~----~~~~Dlli~e~~~~~ 235 (293)
T 3md7_A 203 SVVYCTDVSAFPEQSLQY----IKDADVLIIGALQYR 235 (293)
T ss_dssp TEEEECSCSBCCGGGHHH----HTTCSEEEEECCCSS
T ss_pred EEEEECCCCCCCHHHHHH----hcCCCEEEEeCccCC
Confidence 799999998433322221 137999999998654
No 316
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=39.88 E-value=20 Score=42.95 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=42.3
Q ss_pred hccCCCcchHHHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc----CCCeEEEEeCCccccchHH
Q psy9966 662 VSQLMSEKKSYEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ----HGKKTLSLDYNQVNTHGAA 729 (1101)
Q Consensus 662 ~~~~mn~KK~hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~----~~~~V~~IE~~~~~~~gA~ 729 (1101)
.-++.+|+- -++.|++++..-........|+|-|||.|.+...++.. ....++|+|.++....-|+
T Consensus 196 ~G~fyTP~~--Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~ 265 (542)
T 3lkd_A 196 AGEFYTPQP--VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLAR 265 (542)
T ss_dssp CSSCCCCHH--HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHH
T ss_pred CCeecccHH--HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHH
Confidence 456667752 24444444432111233458999999999987766643 2689999999988665553
No 317
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=38.35 E-value=22 Score=40.87 Aligned_cols=39 Identities=21% Similarity=0.375 Sum_probs=31.0
Q ss_pred CCCeEEEEcCccchHhHHHH-hcCC--CeEEEEeCCccccch
Q psy9966 689 DSSHIIDLGGGQGYLSTILA-LQHG--KKTLSLDYNQVNTHG 727 (1101)
Q Consensus 689 ~~~~vVD~GsGkGyLsr~La-~~~~--~~V~~IE~~~~~~~g 727 (1101)
+...+||+||+.|+-+..+| ...+ .+|+++|.++.+...
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~ 267 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQT 267 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHH
Confidence 34589999999999998877 3333 699999999986543
No 318
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=37.31 E-value=26 Score=39.46 Aligned_cols=49 Identities=20% Similarity=0.152 Sum_probs=35.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhc--CCCeEEEEeCCccccchH
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ--HGKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~--~~~~V~~IE~~~~~~~gA 728 (1101)
++|+.+.-.. ...+||...|-|.-+++|+.. .+-+|+|+|.++.-.+.|
T Consensus 48 Evl~~L~i~p-ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A 98 (347)
T 3tka_A 48 EAVNGLNIRP-DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVA 98 (347)
T ss_dssp HHHHHTCCCT-TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHH
T ss_pred HHHHhhCCCC-CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 4455554222 247899999999999999866 357999999998755444
No 319
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=36.09 E-value=38 Score=39.39 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=30.0
Q ss_pred HHhccCCCCeEEEEcCccchHhHHHHh---c---CCCeEEEEeCCcccc
Q psy9966 683 AVTNSCDSSHIIDLGGGQGYLSTILAL---Q---HGKKTLSLDYNQVNT 725 (1101)
Q Consensus 683 ~l~~~~~~~~vVD~GsGkGyLsr~La~---~---~~~~V~~IE~~~~~~ 725 (1101)
......+.-.||++|+|.|.|..-+-. . ...+++.||.++.+.
T Consensus 131 ~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr 179 (432)
T 4f3n_A 131 QALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELR 179 (432)
T ss_dssp HHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSH
T ss_pred HHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHH
Confidence 333333446899999999998876532 1 134799999998764
No 320
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=35.60 E-value=21 Score=39.53 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=28.8
Q ss_pred CeEEEEcCccchHhHHHHhcCCC-eEEEEeCCcc
Q psy9966 691 SHIIDLGGGQGYLSTILALQHGK-KTLSLDYNQV 723 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~~~~ 723 (1101)
..|||+||+-|--++..|.+.|. .|+|+|.-..
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 48999999999999999988886 5999998643
No 321
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=34.12 E-value=25 Score=37.81 Aligned_cols=34 Identities=24% Similarity=0.186 Sum_probs=29.2
Q ss_pred CCeEEEEcCccchHhHHHHhcCCC-eEEEEeCCcc
Q psy9966 690 SSHIIDLGGGQGYLSTILALQHGK-KTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~~~~ 723 (1101)
...|||+||+-|--++..+.+.|. +|+|+|.-..
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ 113 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGP 113 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCST
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCC
Confidence 348999999999999999988875 6999998753
No 322
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=33.38 E-value=71 Score=34.88 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhccCCCCeEEEEcCccchHhHHHHhc------CCCeEEEEeCCccc
Q psy9966 672 YEVQVMSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ------HGKKTLSLDYNQVN 724 (1101)
Q Consensus 672 hEV~~~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~------~~~~V~~IE~~~~~ 724 (1101)
.....|..++..+........||++|...||=+..+|.- .+.+|+++|..+..
T Consensus 89 ~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~ 147 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGI 147 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCS
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCC
Confidence 346677777777765555669999999999988877642 37899999987654
No 323
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=31.93 E-value=37 Score=37.16 Aligned_cols=43 Identities=19% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEeC
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLDY 720 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE~ 720 (1101)
|.++.... .-.....|||+|||-|--++..+...+. .|+|+|.
T Consensus 79 L~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~Gvdv 122 (282)
T 3gcz_A 79 LRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTL 122 (282)
T ss_dssp HHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEe
No 324
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=29.99 E-value=48 Score=37.43 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=26.3
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccC-CCCCcEEEEcCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWID-KCRPDLLITEST 43 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip-~~~~DvLI~EST 43 (1101)
|+|+.+|++|+||||....++-. .+. ..++|++|+...
T Consensus 237 ~~i~~~g~~i~~sGDt~~~~~~~----~i~~~~~~Dv~il~~g 275 (379)
T 3bv6_A 237 YLIETSGGSVYHSGDSHYSNYYA----KHGNDYQIDVALLSYG 275 (379)
T ss_dssp EEEEETTEEEEECTTCCCCTTHH----HHHHHSCCSEEEEEBC
T ss_pred EEEEeCCeEEEEeCCCCccHHHH----HHhhcCCCCEEEecCC
Confidence 68899999999999988653211 111 126899998543
No 325
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=29.63 E-value=24 Score=37.95 Aligned_cols=34 Identities=15% Similarity=0.034 Sum_probs=26.4
Q ss_pred CCeEEEEcCccchHhHHHHh--------cC-----CCeEEEEeCCcc
Q psy9966 690 SSHIIDLGGGQGYLSTILAL--------QH-----GKKTLSLDYNQV 723 (1101)
Q Consensus 690 ~~~vVD~GsGkGyLsr~La~--------~~-----~~~V~~IE~~~~ 723 (1101)
...|+|+|.|.||-..+++. .+ .++|+++|..+.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~ 107 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPL 107 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCC
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcC
Confidence 45899999999998777543 22 269999999874
No 326
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=29.47 E-value=57 Score=37.31 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=26.3
Q ss_pred CeEEEEcCccchHhHHHHh--------cCCCeEEEEeCCcccc
Q psy9966 691 SHIIDLGGGQGYLSTILAL--------QHGKKTLSLDYNQVNT 725 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~--------~~~~~V~~IE~~~~~~ 725 (1101)
-.||++|+|.|.|..-+-. ...++++.||.++.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 3699999999999764421 1246899999998754
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=29.33 E-value=48 Score=36.61 Aligned_cols=53 Identities=15% Similarity=0.231 Sum_probs=39.7
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCccccchHHHHhhh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQVNTHGAAVRSKK 734 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~~~~~gA~~r~~k 734 (1101)
.+|...+.. ...|+|.-||.|-.+.+. .+.|.+.+|+|.++..+..|.+|-++
T Consensus 244 ~~i~~~~~~--~~~VlDpF~GsGtt~~aa-~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 244 FFIRMLTEP--DDLVVDIFGGSNTTGLVA-ERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHCCT--TCEEEETTCTTCHHHHHH-HHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHhCCC--CCEEEECCCCCCHHHHHH-HHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 344444333 347999999999987664 47899999999999988888776543
No 328
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=28.32 E-value=48 Score=35.75 Aligned_cols=50 Identities=20% Similarity=0.080 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCCceeecCCCCEEEE
Q psy9966 232 DAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCFMPANGESCFV 284 (1101)
Q Consensus 232 D~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~~P~nGe~v~l 284 (1101)
..++..+++++.+|+++++.|...... .+.+++.++.++.....|.++++
T Consensus 235 ~~~~a~~~~~~~~~~~l~l~H~~~~~~---~~~~~~~~~~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 235 KVKDIARKIEEYGVKKVLTGHCTGIDE---YGFLKSVLKDKISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHHHHTTBCCEEECGGGCHHH---HHHHHHHHGGGEEECCTTCEEEC
T ss_pred HHHHHHHHHHcCCCCEEEeeCcCcHHH---HHHHHHHhCCCEEEcCCCcEEeC
Confidence 688899999999999999999987432 23566677777888888888764
No 329
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=27.40 E-value=64 Score=35.69 Aligned_cols=52 Identities=17% Similarity=0.272 Sum_probs=39.0
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCCeEEEEeCCc---cccchHHHHhh
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGKKTLSLDYNQ---VNTHGAAVRSK 733 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~~V~~IE~~~---~~~~gA~~r~~ 733 (1101)
.+|...+... ..|+|.-||.|--+.+.. ..|.+.+|+|.++ ..++.|.+|-+
T Consensus 234 ~~i~~~~~~~--~~vlDpF~GsGtt~~aa~-~~~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 234 RLVRALSHPG--STVLDFFAGSGVTARVAI-QEGRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HHHHHHSCTT--CEEEETTCTTCHHHHHHH-HHTCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred HHHHHhCCCC--CEEEecCCCCCHHHHHHH-HcCCcEEEEECCccHHHHHHHHHHHHH
Confidence 4555444333 479999999998876554 6799999999999 88888877654
No 330
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=27.04 E-value=58 Score=36.30 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=26.4
Q ss_pred EEEEECCEEEEEEcCCCCCCCCCCCCcccC-CCCCcEEEEcCC
Q psy9966 2 FQVKVGNQSIVYTGDYNMTPDRHLGAAWID-KCRPDLLITEST 43 (1101)
Q Consensus 2 f~Ie~~g~rIlYTGDf~~~~dr~L~~a~ip-~~~~DvLI~EST 43 (1101)
|+|+.+|++|+||||....++-. .+. ..++|++|+...
T Consensus 212 ~~i~~~g~~i~~sGDt~~~~~~~----~i~~~~~~Dv~il~~g 250 (360)
T 2wyl_A 212 YLFKTPGGSLYHSGDSHYSNYYA----KHGNEHQIDVALGSYG 250 (360)
T ss_dssp EEEEETTEEEEECTTCCCCTTHH----HHHHHSCCCEEEEEBC
T ss_pred EEEEECCcEEEEeCCCCcCHHHH----HHhhCCCCCEEEecCC
Confidence 67899999999999988653211 111 126899999644
No 331
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.75 E-value=45 Score=31.42 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=25.3
Q ss_pred CeEEEEcCccchHhHHHHhc---CCCeEEEEeCCcccc
Q psy9966 691 SHIIDLGGGQGYLSTILALQ---HGKKTLSLDYNQVNT 725 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~---~~~~V~~IE~~~~~~ 725 (1101)
.+|+=+|+ |++|+.++.. .|.+|+++|.++...
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~ 42 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKI 42 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 46888888 5688887753 589999999987643
No 332
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=26.34 E-value=44 Score=33.03 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=42.1
Q ss_pred CCCcEEEEcCCCCCCCCCChhHHH------HHHHHHHHHHHhCCCeEEEeecchhHHHHHHHHHHHHHH
Q psy9966 33 CRPDLLITESTYATTIRDSKRCRE------RDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWE 95 (1101)
Q Consensus 33 ~~~DvLI~ESTYg~~~~~~r~~rE------~~f~~~I~etl~~GG~VLIPvFAlGRaQELl~iL~~~w~ 95 (1101)
...|++|+....-...+.. .+.+ ..+++.+...++.||++++-++......+++..+..++.
T Consensus 96 ~~fD~V~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~ 163 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRD-LDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQ 163 (196)
T ss_dssp GCEEEEEECCCCCCCSCHH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEE
T ss_pred CCCcEEEeCCCCCCCCCcc-cCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhc
Confidence 4689999975432221111 1111 467778888999999999998877777788877776653
No 333
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=24.92 E-value=50 Score=37.38 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=34.8
Q ss_pred HHHHHHhccCCCCeEEEEcCccchHhHHHHhc-CCCeEEEEeCCcccc
Q psy9966 679 QVVAAVTNSCDSSHIIDLGGGQGYLSTILALQ-HGKKTLSLDYNQVNT 725 (1101)
Q Consensus 679 ~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~-~~~~V~~IE~~~~~~ 725 (1101)
.+++.+.+......|+|.|||-|-=+-.||.. .+-.|+++|.++..+
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~ 185 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI 185 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH
Confidence 45555656555679999999999888777754 334799999986533
No 334
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=24.68 E-value=26 Score=38.55 Aligned_cols=63 Identities=8% Similarity=0.102 Sum_probs=40.5
Q ss_pred CCCcEEEEcCCCCCCCCCCh--hHHHH---HHHHHHHHHHhCCCeEEEeecchh--HHHHHHHHHHHHHH
Q psy9966 33 CRPDLLITESTYATTIRDSK--RCRER---DFLKKVHECVDRGGKVLIPVFALG--RAQELCILLETYWE 95 (1101)
Q Consensus 33 ~~~DvLI~ESTYg~~~~~~r--~~rE~---~f~~~I~etl~~GG~VLIPvFAlG--RaQELl~iL~~~w~ 95 (1101)
.++|+++++-.--.+.|.-. .+-.+ -+++...+.++.||..++-+|.-| ..++|+..|..+.+
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~ 274 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFK 274 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcc
Confidence 46999999865333333100 11111 133444456788999999999999 78888887776543
No 335
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=24.04 E-value=48 Score=33.55 Aligned_cols=62 Identities=11% Similarity=0.198 Sum_probs=42.0
Q ss_pred CCcEEEEcCCCCCCCCCChh-----HHHHHHHHHHHHHHhCCCeEEEeecchhHHHHHHHHHHHHHH
Q psy9966 34 RPDLLITESTYATTIRDSKR-----CRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETYWE 95 (1101)
Q Consensus 34 ~~DvLI~ESTYg~~~~~~r~-----~rE~~f~~~I~etl~~GG~VLIPvFAlGRaQELl~iL~~~w~ 95 (1101)
.+|+++++............ ..-...++.+.+.|+.||+.++-+|.-+..++++..+..++.
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~ 157 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFS 157 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEE
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcC
Confidence 78999998643222111111 112355667778899999999999988888888888776543
No 336
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=23.17 E-value=76 Score=35.02 Aligned_cols=42 Identities=19% Similarity=0.151 Sum_probs=0.0
Q ss_pred HHHHHHHHhccCCCCeEEEEcCccchHhHHHHhcCCC-eEEEEe
Q psy9966 677 MSQVVAAVTNSCDSSHIIDLGGGQGYLSTILALQHGK-KTLSLD 719 (1101)
Q Consensus 677 ~s~~v~~l~~~~~~~~vVD~GsGkGyLsr~La~~~~~-~V~~IE 719 (1101)
|.++... .-......|||+|||-|--++.++...+. .|.|+|
T Consensus 70 L~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvd 112 (300)
T 3eld_A 70 IRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYT 112 (300)
T ss_dssp HHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEEC
T ss_pred HHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEE
No 337
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=23.11 E-value=24 Score=35.90 Aligned_cols=24 Identities=21% Similarity=0.289 Sum_probs=20.7
Q ss_pred EcCccchHhHHHHhcCCCeEEEEe
Q psy9966 696 LGGGQGYLSTILALQHGKKTLSLD 719 (1101)
Q Consensus 696 ~GsGkGyLsr~La~~~~~~V~~IE 719 (1101)
.||||+.+++.||-.+|..++..|
T Consensus 9 ~GsGKsT~a~~L~~~~~~~~i~~d 32 (216)
T 3dl0_A 9 PGAGKGTQGERIVEKYGIPHISTG 32 (216)
T ss_dssp TTSSHHHHHHHHHHHSSCCEEEHH
T ss_pred CCCCHHHHHHHHHHHhCCcEEeHH
Confidence 499999999999988998887663
No 338
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=22.92 E-value=78 Score=34.83 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=37.6
Q ss_pred hccCCCCeEEEEcCccchHhHHHHhcC-CCeEEEEeCCccccchHHH
Q psy9966 685 TNSCDSSHIIDLGGGQGYLSTILALQH-GKKTLSLDYNQVNTHGAAV 730 (1101)
Q Consensus 685 ~~~~~~~~vVD~GsGkGyLsr~La~~~-~~~V~~IE~~~~~~~gA~~ 730 (1101)
+...+.+.|+=+|.|-|-+.|.+.... .-+|+.+|.++.-++-|++
T Consensus 79 ~~~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~ 125 (294)
T 3o4f_A 79 LAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQ 125 (294)
T ss_dssp HHSSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHH
T ss_pred hhCCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHh
Confidence 334567899999999999999998654 4699999999998876654
No 339
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=22.80 E-value=61 Score=30.74 Aligned_cols=36 Identities=11% Similarity=0.235 Sum_probs=26.5
Q ss_pred CeEEEEcCccchHhHHHHhc---CCCeEEEEeCCccccchH
Q psy9966 691 SHIIDLGGGQGYLSTILALQ---HGKKTLSLDYNQVNTHGA 728 (1101)
Q Consensus 691 ~~vVD~GsGkGyLsr~La~~---~~~~V~~IE~~~~~~~gA 728 (1101)
.+|+=+|+ |.+|+.+|.. .|.+|++||.++..++.+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 36777877 5677777643 699999999998765443
No 340
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=22.02 E-value=2e+02 Score=31.05 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCCeEEEecccCCCcchhhhhcCcceEEecCCeeEEEeeEEEEEecccCCCH---HHHHHHHHHhCCCEEEEecCChhHH
Q psy9966 182 ENNMLIMPGFCVQGTIGHKVLSGVKKLEFENKQIIDVKMAIEYMSFSAHADA---KGIMQLIQYCEPKNVLLVHGEASKM 258 (1101)
Q Consensus 182 ~~N~VI~tGy~~~GT~g~~Ll~g~k~i~l~~g~~i~v~~~V~~i~fSaHAD~---~~l~~~I~~l~Pk~VILVHGe~~~m 258 (1101)
++-.||+||=+-+|-. .+++-++++ . | -++.+-|=-+|+.. ++. ++..+++++++|+++++.|-....
T Consensus 171 ~~GlvvitGCsH~GI~--Niv~~a~~~--~-g--~~i~~viGGfHL~~-~~~~~l~~tl~~l~~~~~~~i~~~HCTg~~- 241 (267)
T 3h3e_A 171 KEGLVVITGCSHRGID--NILLDIAET--F-N--ERIKMVVGGFHLLK-SSDDEIEKIVKAFNELGVETVVPCHCTGER- 241 (267)
T ss_dssp TTEEEEEESCCTTCHH--HHHHHHHTT--C-S--SCEEEEEEECCCTT-SCHHHHHHHHHHHHHTTCCEEEEETTSCHH-
T ss_pred CCcEEEEeCCCCcCHH--HHHHHHHHH--h-C--CCceEEEeccccCC-CCHHHHHHHHHHHHhcCCCEEEEECCCCHH-
Confidence 3456788887767632 111111111 0 1 12333344466544 344 455666777899999999987532
Q ss_pred HHHHHHHHHHcCCceeecCCCCEEEEe
Q psy9966 259 VFLKEKIKQEFNLDCFMPANGESCFVQ 285 (1101)
Q Consensus 259 ~~Lk~~L~~e~gi~v~~P~nGe~v~l~ 285 (1101)
....|.++++.++.....|.++++.
T Consensus 242 --a~~~L~~~lp~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 242 --AVDIFKREFLGKIMDCYAGLKLEVS 266 (267)
T ss_dssp --HHHHHHHHCSSEECCCCTTCEEEEC
T ss_pred --HHHHHHHHCCCCEEEecCceEEEeC
Confidence 2345777888888888899998874
No 341
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=21.50 E-value=52 Score=34.41 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=36.5
Q ss_pred ecccCCCHHHHHHHHHHhCCCEEEEecCChhHHHHHHHHHHHHcCCcee
Q psy9966 226 SFSAHADAKGIMQLIQYCEPKNVLLVHGEASKMVFLKEKIKQEFNLDCF 274 (1101)
Q Consensus 226 ~fSaHAD~~~l~~~I~~l~Pk~VILVHGe~~~m~~Lk~~L~~e~gi~v~ 274 (1101)
.-..|.+.++..++++.++|+.+|++|=.....+.+++.+.+ .|++|.
T Consensus 183 ~~~~h~~~~ea~~~~~~l~~k~vip~H~~~~~~~~~~~~l~~-~gi~v~ 230 (235)
T 3kl7_A 183 NQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKD-SGIDVR 230 (235)
T ss_dssp CTTTSCCHHHHHHHHHHHCCSEEEEESCTTCCTTHHHHHTTT-SCCEEC
T ss_pred CCCcccCHHHHHHHHHHcCCCEEEEEcCCCCCHHHHHHHHhh-CCCEEE
Confidence 346799999999999999999999999765555566665543 355543
No 342
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=21.00 E-value=1.5e+02 Score=29.87 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=39.5
Q ss_pred CCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCCeEEEeecchhHHHHHHHHHHHH
Q psy9966 34 RPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETY 93 (1101)
Q Consensus 34 ~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG~VLIPvFAlGRaQELl~iL~~~ 93 (1101)
.+|++++.... .. . +++.+.+.++.||++++-+.......++...+.+.
T Consensus 122 ~~D~v~~~~~~---------~~-~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGGG---------SQ-A-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSCC---------CH-H-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcc---------cH-H-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhC
Confidence 68999987622 12 2 88888999999999999999888888888887765
No 343
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=20.85 E-value=37 Score=35.17 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=19.5
Q ss_pred cCccchHhHHHHhcCCCeEEEE
Q psy9966 697 GGGQGYLSTILALQHGKKTLSL 718 (1101)
Q Consensus 697 GsGkGyLsr~La~~~~~~V~~I 718 (1101)
|||||-++..||-.||+..++.
T Consensus 10 GsGKgTqa~~La~~~g~~~ist 31 (206)
T 3sr0_A 10 GAGKGTQAKRLAKEKGFVHIST 31 (206)
T ss_dssp TSSHHHHHHHHHHHHCCEEEEH
T ss_pred CCCHHHHHHHHHHHHCCeEEcH
Confidence 8999999999999999877653
No 344
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=20.81 E-value=1.7e+02 Score=31.33 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=36.4
Q ss_pred CCCCCcEEEEcCCCCCCCCCChhHHH--HHHHHHHHHHHhCCC--eEEEeecchhHHHHHHHHHHH
Q psy9966 31 DKCRPDLLITESTYATTIRDSKRCRE--RDFLKKVHECVDRGG--KVLIPVFALGRAQELCILLET 92 (1101)
Q Consensus 31 p~~~~DvLI~ESTYg~~~~~~r~~rE--~~f~~~I~etl~~GG--~VLIPvFAlGRaQELl~iL~~ 92 (1101)
+...+|+++++.. ....++ ..+.+ ..+++.+...|+.|| ..++-+|. ....+++.++..
T Consensus 137 ~~~~fD~V~sd~~-~~~~~~-~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~~l~~ 199 (265)
T 2oxt_A 137 PVERTDVIMCDVG-ESSPKW-SVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSVEVMERLSV 199 (265)
T ss_dssp CCCCCSEEEECCC-CCCSCH-HHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSHHHHHHHHH
T ss_pred CCCCCcEEEEeCc-ccCCcc-chhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCChhHHHHHHH
Confidence 3457899999865 211111 11111 136788888999999 99998987 555544444443
No 345
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=20.22 E-value=1.3e+02 Score=28.77 Aligned_cols=51 Identities=14% Similarity=0.279 Sum_probs=38.4
Q ss_pred CCCcEEEEcCCCCCCCCCChhHHHHHHHHHHHHHHhCCCeEEEeecchhHHHHHHHHHHHH
Q psy9966 33 CRPDLLITESTYATTIRDSKRCRERDFLKKVHECVDRGGKVLIPVFALGRAQELCILLETY 93 (1101)
Q Consensus 33 ~~~DvLI~ESTYg~~~~~~r~~rE~~f~~~I~etl~~GG~VLIPvFAlGRaQELl~iL~~~ 93 (1101)
...|++++...... .++++.+.+.++.||.+++-.+......++...+..+
T Consensus 93 ~~~D~i~~~~~~~~----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQF 143 (178)
T ss_dssp SCCSEEEECC-TTC----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcccH----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHc
Confidence 57899997655432 4578888889999999999888877777777666655
No 346
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=20.18 E-value=26 Score=34.55 Aligned_cols=24 Identities=29% Similarity=0.342 Sum_probs=20.5
Q ss_pred EcCccchHhHHHHhcCCCeEEEEe
Q psy9966 696 LGGGQGYLSTILALQHGKKTLSLD 719 (1101)
Q Consensus 696 ~GsGkGyLsr~La~~~~~~V~~IE 719 (1101)
.||||..+|+.||..+|..++..|
T Consensus 11 ~GsGKsT~a~~La~~lg~~~id~D 34 (184)
T 2iyv_A 11 PGSGKSTIGRRLAKALGVGLLDTD 34 (184)
T ss_dssp TTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred CCCCHHHHHHHHHHHcCCCEEeCc
Confidence 599999999999988898876544
No 347
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=20.12 E-value=42 Score=33.01 Aligned_cols=25 Identities=16% Similarity=-0.064 Sum_probs=21.7
Q ss_pred EcCccchHhHHHHhcC---CCeEEEEeC
Q psy9966 696 LGGGQGYLSTILALQH---GKKTLSLDY 720 (1101)
Q Consensus 696 ~GsGkGyLsr~La~~~---~~~V~~IE~ 720 (1101)
.||||+.+++.|+..+ |.+|+..|-
T Consensus 9 ~GsGKsT~~~~L~~~l~~~g~~~i~~d~ 36 (195)
T 2pbr_A 9 DGSGKTTQAKKLYEYLKQKGYFVSLYRE 36 (195)
T ss_dssp TTSCHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 5999999999999766 899988763
Done!