BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9968
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383860977|ref|XP_003705963.1| PREDICTED: DE-cadherin-like [Megachile rotundata]
Length = 1584
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 74/118 (62%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D P +GGTI Y + APGE+ KF ID TG+++T
Sbjct: 98 IQVHAEDRDHPDDGGTITYSFVTAPGEKLKFEIDNRTGLIRT------------------ 139
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE Y+TV+A DNG PQL D CT K+T+ED+NDNEP+FD+V Y
Sbjct: 140 ----TQGLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNEPVFDKVAY 193
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + R F+IDK+TG + TL DR E+ T
Sbjct: 430 MQVRAIDADGTSAHNQVTYELDNF---RDLFAIDKDTGNITTLTTFDR-------EVEDT 479
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A+D K E N Q+ +I + D NDN P F + Y
Sbjct: 480 YNVKVIAVDNSPSALFK------TGEHNKGQQV-----FRIEIADKNDNAPHFTQAVY 526
>gi|328783387|ref|XP_394063.4| PREDICTED: DE-cadherin-like [Apis mellifera]
Length = 1576
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 73/118 (61%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D P NGGTI Y + APGE+ KF I+ TG+++T
Sbjct: 90 IQVHAKDRDNPDNGGTITYSFVTAPGEKLKFEINNRTGLIRT------------------ 131
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE Y+TV+A DNG PQL D CT K+T+ED+NDN P+FD+V Y
Sbjct: 132 ----TQVLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNSPVFDKVAY 185
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + R F+IDK TG + TL DR+D + T
Sbjct: 415 MQVRAIDADGTSAHNQVTYELDNF---RDLFAIDKYTGNITTLTTFDREDED-------T 464
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A+D K E N Q+ +I + D NDN P F + Y
Sbjct: 465 YNVKVIAVDNSPSALFK------TGEHNKGQQV-----FRIEIADKNDNAPHFTQAVY 511
>gi|380016155|ref|XP_003692054.1| PREDICTED: LOW QUALITY PROTEIN: DE-cadherin-like [Apis florea]
Length = 1489
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 73/118 (61%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D P NGGTI Y + APGE+ KF I+ TG+++T
Sbjct: 88 IQVHAKDRDNPDNGGTITYSFVTAPGEKLKFEINNRTGLIRT------------------ 129
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE Y+TV+A DNG PQL D CT K+T+ED+NDN P+FD+V Y
Sbjct: 130 ----TQVLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNSPVFDKVAY 183
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + R F+IDK TG + TL DR+D + T
Sbjct: 413 MQVRAIDADGTSAHNQVTYELDNF---RDLFAIDKYTGNITTLTTFDREDED-------T 462
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A+D K E N Q+ +I + D NDN P F + Y
Sbjct: 463 YNVKVIAVDNSPSALFK------TGEHNKGQQV-----FRIEIADKNDNAPHFTQAVY 509
>gi|350404065|ref|XP_003486995.1| PREDICTED: DE-cadherin-like [Bombus impatiens]
Length = 1575
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA D D P +GGTI Y + APGE+ KF I+ TG+++T
Sbjct: 90 IKVHAEDRDHPDDGGTITYSFVTAPGEKLKFEINNRTGLIRT------------------ 131
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE Y+TV+A DNG PQL D CT K+T+ED+NDN P+FD+V Y
Sbjct: 132 ----TQVLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNGPVFDKVAY 185
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + R F+IDK TG + TL DR+ + T
Sbjct: 417 MQVRAIDADGTSAHNQVTYELDNF---RDLFAIDKYTGNITTLTTFDRETED-------T 466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A+D K E N Q+ +I + D NDN P F + Y
Sbjct: 467 YNVKVIAMDNSPSALFK------TGEHNKGQQV-----FRIEIADKNDNAPHFTQAVY 513
>gi|340725620|ref|XP_003401166.1| PREDICTED: DE-cadherin-like [Bombus terrestris]
Length = 1575
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 73/118 (61%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA D D P +GGTI Y + APGE+ KF I+ TG+++T
Sbjct: 90 IKVHAEDRDHPDDGGTITYSFVTAPGEKLKFEINNRTGLIRT------------------ 131
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE Y+TV+A DNG PQL D CT K+T+ED+NDN P+FD+V Y
Sbjct: 132 ----TQVLDRDEPAREKEAYLTVLATDNGRPQLDDVCTFKVTIEDVNDNGPVFDKVAY 185
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + R F+IDK TG + TL DR+ + T
Sbjct: 417 MQVRAIDADGTSAHNQVTYELDNF---RDLFAIDKYTGNITTLTKFDRETED-------T 466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A+D K E N Q+ +I + D NDN P F + Y
Sbjct: 467 YNVKVIAMDNSPSALFK------TGEHNKGQQV-----FRIEIADKNDNAPHFTQAVY 513
>gi|332024902|gb|EGI65090.1| DE-cadherin [Acromyrmex echinatior]
Length = 1525
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D DPP GGTI Y K P +R KF+I+ +TG++ T
Sbjct: 120 IQVHAEDRDPPEEGGTITYSFAKDPKDRLKFAINNKTGLITT------------------ 161
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDRD+P REKE+Y+TV+A DNG PQL D CT K+T+ED+NDN P FD+ Y
Sbjct: 162 ----TQILDRDEPAREKEVYLTVLATDNGRPQLDDHCTFKVTIEDVNDNYPEFDKANY 215
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D S + Y + + F+ID +TG + TL DR+ ++ IY
Sbjct: 452 MQVRAIDADGTSANNQVTYELDNF---KDFFAIDPQTGNITTLMTFDRE----KQHIY-- 502
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D K E N Q T +I + D NDN P F R Y
Sbjct: 503 -NVKVIATDNSPSALFK------TGEHNKGQQ-----TFQIEIADKNDNPPRFTRKVY 548
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 66 QALDRDDPEREKEIYITVIA--EDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ LDRD P +TV A ED+ L + T+ IT+ DINDN P D
Sbjct: 707 KPLDRDPPNGFSTWTVTVKARDEDDSPSALRELVTVNITLRDINDNAPFLD 757
>gi|345493189|ref|XP_001603649.2| PREDICTED: DE-cadherin-like [Nasonia vitripennis]
Length = 1504
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 68/118 (57%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ VHA D DPP +GGTI Y + GE+ KF ID TG + T
Sbjct: 94 LTVHAEDRDPPEDGGTITYSFVTTTGEKLKFKIDNTTGEITT------------------ 135
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDRD+P REKEIY+TV+A DNG PQL D CT K+TV DINDN P+FD+V Y
Sbjct: 136 ----THMLDRDEPAREKEIYLTVLATDNGRPQLDDVCTFKVTVTDINDNAPVFDKVSY 189
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 43 LYALDRDDPEREKEIYITTDIRVQA---LDRDDPEREKEIYITVIA--EDNGTPQLSDAC 97
+Y++ R PE + I I D ++ LDRD P I VIA ED G L +
Sbjct: 654 VYSILR--PEHQPLIEINKDGCMKLKKPLDRDPPHGYPVWTIIVIAQDEDGGQNSLRNVE 711
Query: 98 TMKITVEDINDNEPMFD 114
+ IT+ DINDN P D
Sbjct: 712 AVNITLTDINDNAPFLD 728
>gi|242019060|ref|XP_002429984.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212515039|gb|EEB17246.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 1478
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D DP NGG I Y + +PGER +F+I+ +TGI++T Y DRD+P
Sbjct: 72 FQVKAIDKDPIENGGKISYTFVSSPGERLRFTIESDTGIIRTQYVFDRDEPT-------- 123
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
REKE+Y+ V A DNG PQL D C +K+T+EDINDN P FD+ Y
Sbjct: 124 --------------REKEVYLNVRATDNGHPQLDDVCLIKVTIEDINDNSPFFDKANY 167
>gi|332024905|gb|EGI65093.1| DE-cadherin [Acromyrmex echinatior]
Length = 1591
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D DPP +GGT+ Y + APG+R KF ID +TG++ T LDRD+P R
Sbjct: 182 IQVHADDRDPPEDGGTVTYSFLIAPGDRIKFEIDNKTGLITTTQVLDRDEPAR------- 234
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EKE Y+T++A DNG PQL C +K+ +ED NDN+P FD+ Y
Sbjct: 235 ---------------EKEAYLTILATDNGRPQLDAICALKVIIEDENDNKPAFDKASY 277
>gi|61162121|dbj|BAD91050.1| Gb1-cadherin [Gryllus bimaculatus]
Length = 1481
Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DPP GGT+ Y + A GER KF ID TG + T
Sbjct: 75 LTVQAEDRDPPDAGGTLTYSFVTALGEREKFRIDNVTGEITT------------------ 116
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q DRD+P REKE+YI V A DNG PQL D C++K+ +EDINDN P+FD+V Y
Sbjct: 117 ----KQPFDRDEPSREKEVYIAVRATDNGRPQLDDICSIKVVIEDINDNRPIFDKVSY 170
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D + + Y + + +F ID TG + T DR++ + K I
Sbjct: 401 MQVRAIDLDGTTAHNQVTYELENVTEVQERFQIDPHTGNITTKVKFDREEKDFYKVKVIA 460
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD AL D + E T +I + DINDN+P F + Y
Sbjct: 461 TDSSPSALFHDGRHNKGE------------------HTFRIEIADINDNQPRFTKKMY 500
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 65 VQALDRDDPER--EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+++LDRD P E +++I ED L I + DINDN P D VQ
Sbjct: 659 IKSLDRDPPNGYDEWQVFIAADDEDGDVKSLRQTTDFLIHLIDINDNAPFLDMVQ 713
>gi|157132424|ref|XP_001662556.1| cadherin [Aedes aegypti]
gi|108871179|gb|EAT35404.1| AAEL012421-PA, partial [Aedes aegypti]
Length = 1420
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD P + TI Y + APGER KF IDK TG++ T++ DRD+P R
Sbjct: 28 IQVTATD---PDDHQTIAYSFVTAPGERPKFRIDKNTGLITTIHRFDRDEPIR------- 77
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EKE+YITV A D+G P L D CT K+T+EDINDN P+FD+ +Y
Sbjct: 78 ---------------EKEVYITVRATDDGLPNLDDVCTFKVTIEDINDNPPVFDKTRY 120
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
A D D P NG QY I + + + KF ID + LYA R
Sbjct: 676 ADDYDEPQNGPPFQYEISDSASDDIKQKFRIDTD-----VLYAQVR-------------- 716
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNE 110
DR ER+KE +I V+ D+G PQ LS + + + D+NDNE
Sbjct: 717 -----FDR---ERQKEYFIPVLITDSGKPQPLSKVSILHLVIGDVNDNE 757
>gi|322784378|gb|EFZ11349.1| hypothetical protein SINV_04504 [Solenopsis invicta]
Length = 131
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 22/104 (21%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
TI Y + AP E+ KF+ID TG++KTL Q LDRD+P
Sbjct: 39 STITYSFVTAPDEKLKFAIDNTTGLIKTL----------------------QILDRDEPA 76
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+EKE Y+TV+A DNG PQL D CT K+T+ED+NDN P FD+V++
Sbjct: 77 KEKEFYLTVLATDNGRPQLDDVCTFKVTIEDVNDNPPAFDKVEH 120
>gi|170050971|ref|XP_001861552.1| DE-cadherin [Culex quinquefasciatus]
gi|167872429|gb|EDS35812.1| DE-cadherin [Culex quinquefasciatus]
Length = 1490
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+ATD P + TI Y + APGER+KF IDK TG + T
Sbjct: 96 IQVNATD---PDDHQTISYSFVTAPGERSKFRIDKNTGQITT------------------ 134
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ DRD+P REKE+YITV A D+G P L D CT K+T++DINDN P+FD+ +Y
Sbjct: 135 ----IHRFDRDEPIREKEVYITVRATDDGLPNLDDVCTFKVTIKDINDNPPVFDKSRY 188
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 26/107 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D P NG +Y I + E +KT++ +D D
Sbjct: 745 ADDNDEPHNGPPFRYEIPDSASEE-----------IKTMFRIDED--------------V 779
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNE 110
+ AL + D E +KE I ++ D+G P+ LS + + + D+NDNE
Sbjct: 780 LYALVKFDREEQKEYRIPILITDSGEPRPLSKVSILHLVIGDVNDNE 826
>gi|158286072|ref|XP_308578.4| AGAP007203-PA [Anopheles gambiae str. PEST]
gi|157020292|gb|EAA04514.5| AGAP007203-PA [Anopheles gambiae str. PEST]
Length = 1524
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D DP TI+Y + PGERA+F IDK TG + T
Sbjct: 126 LRVTASDPDPRQ---TIEYSFVTTPGERARFRIDKSTGDITT------------------ 164
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P REKEIYITV A DNG P+L D CT K+T+ DINDN P+FD+V+Y
Sbjct: 165 ----AHIFDRDEPIREKEIYITVRATDNGRPRLDDVCTFKVTILDINDNPPVFDKVRY 218
>gi|158286070|ref|XP_001688008.1| AGAP007203-PB [Anopheles gambiae str. PEST]
gi|157020291|gb|EDO64657.1| AGAP007203-PB [Anopheles gambiae str. PEST]
Length = 1411
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D DP TI+Y + PGERA+F IDK TG + T
Sbjct: 13 LRVTASDPDPRQ---TIEYSFVTTPGERARFRIDKSTGDITT------------------ 51
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P REKEIYITV A DNG P+L D CT K+T+ DINDN P+FD+V+Y
Sbjct: 52 ----AHIFDRDEPIREKEIYITVRATDNGRPRLDDVCTFKVTILDINDNPPVFDKVRY 105
>gi|158286068|ref|XP_001237106.2| AGAP007207-PA [Anopheles gambiae str. PEST]
gi|157020290|gb|EAU77652.2| AGAP007207-PA [Anopheles gambiae str. PEST]
Length = 1268
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D++P TI+Y ++ PGE+A+F IDK TG + T
Sbjct: 13 LRVIAIDLNPRQ---TIEYSLVTTPGEQARFRIDKSTGDITT------------------ 51
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P REKEIYITV A DNG P+L D CT K+ + DINDN P+FD+V+Y
Sbjct: 52 ----AHIFDRDEPIREKEIYITVRATDNGRPRLDDVCTFKVMILDINDNPPVFDKVRY 105
>gi|312373656|gb|EFR21358.1| hypothetical protein AND_17163 [Anopheles darlingi]
Length = 1523
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 66/118 (55%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD P TI+Y + GERA+F IDK TG + T
Sbjct: 120 IRVTATD---PDRRQTIEYSFVTTAGERARFRIDKSTGEITT------------------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P REKEIYITV A DNG P+L D CT K+T+ DINDN P+FD+V+Y
Sbjct: 159 ----AHIFDRDEPIREKEIYITVRATDNGRPRLDDVCTFKVTILDINDNPPVFDKVRY 212
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 12 SNGGTIQYRIIKAPGERAKFS---IDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
SN + + ++PG K + +D+ +++D + P +E + D + AL
Sbjct: 748 SNAMPVVWYENRSPGLIVKLTAEDVDEAQNGPPFFFSIDPNAPYEIRERFKVEDSDLYAL 807
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
D E +KE Y+ + D+G P +SD + + + D NDN PM
Sbjct: 808 VEFDREEQKEYYVPIRIRDSGEPPMSDISILHLVIGDENDN-PM 850
>gi|118778319|ref|XP_308569.3| AGAP007216-PA [Anopheles gambiae str. PEST]
gi|116132326|gb|EAA04226.3| AGAP007216-PA [Anopheles gambiae str. PEST]
Length = 1424
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A D DP I+Y ++ PGER +F IDK TG + T
Sbjct: 39 LHVNAIDQDP---NQIIEYSLMTTPGERVRFRIDKNTGEITT------------------ 77
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V DRD+P REKEIYI+V A D+G P+L D CT+K+ + DINDN P+FD+V+Y
Sbjct: 78 ----VHVFDRDEPIREKEIYISVRATDDGRPRLDDVCTLKVKIVDINDNSPVFDKVRY 131
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 20/118 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D+D + YR + F ID TG +KTL ALDR+ + + +
Sbjct: 365 MVVKAYDLDGTPANNIVSYRFEDE--SQHLFHIDNITGQIKTLAALDREQTDSYQLKVVA 422
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D AL R NG P S + I V D NDN+P F +
Sbjct: 423 EDNSPSALYR-----------------NGKPN-SITKLLFIKVMDKNDNKPAFTSQHF 462
>gi|189233794|ref|XP_001814885.1| PREDICTED: similar to Gb1-cadherin [Tribolium castaneum]
gi|270015146|gb|EFA11594.1| DE cadherin-like protein [Tribolium castaneum]
Length = 1437
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 68/119 (57%), Gaps = 23/119 (19%)
Query: 1 MQVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D DPP GG I Y I + PG R F I+K TG + T AL
Sbjct: 48 IRVQAVDEDPPDREGGRITYTIEEPPGTRPNFKINKRTGEITT--AL------------- 92
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P R+KEIY+TV A D+G P+L+D CT+K+TVEDINDN P FD+ Y
Sbjct: 93 -------PFDRDEPNRQKEIYLTVRAVDDGRPELADICTIKVTVEDINDNSPSFDQHDY 144
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D S + Y ++ + F IDK +G++ + DR E+EK ++T
Sbjct: 377 MTVRAIDKDGTSPNNLVVYELLDY---KDLFEIDKNSGVITAKASFDR---EKEKLYHVT 430
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R A+ P + K P +++ T +I++ED NDN+P F + Y
Sbjct: 431 VQARDSAISALFPSKNK-------------PNVANQ-TFQISIEDQNDNQPKFTKSLY 474
>gi|195455675|ref|XP_002074819.1| GK22947 [Drosophila willistoni]
gi|194170904|gb|EDW85805.1| GK22947 [Drosophila willistoni]
Length = 1505
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD DP I+Y ++++P ER KF I+ +G++ T + DRD+P E
Sbjct: 102 FQVKATDPDP---NQEIRYSLVQSPFERPKFFINPNSGVIVTAHTFDRDEPIHE------ 152
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 153 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNPPVFNKARY 194
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 29/111 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A D D P NG Y I + KFSID + ++
Sbjct: 746 VQLQANDYDEPQNGPPYTYGIDSDASSDIKKKFSIDNDYLFANVMF-------------- 791
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
D E +KE +I + D+G P+ S + + + D+NDN
Sbjct: 792 -------------DREEQKEYFIPIRISDSGVPRQSAVSILHLIIGDVNDN 829
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 65 VQALDRDDPEREKEIYITVIAEDN---GTPQLSDACTMKITVEDINDNEPMF 113
+Q LDRD P K + + A D GT L + IT++DINDN P
Sbjct: 678 IQTLDRDQPNGHKSWQVLISASDQDGVGT-TLKSVKAVSITLQDINDNAPFL 728
>gi|61162125|dbj|BAD91052.1| Fc1-cadherin [Folsomia candida]
Length = 1565
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 22/113 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D DPP +GGT+ Y I+ A F++D+ TG + T DRD+P +EK
Sbjct: 126 IQVKALDQDPPESGGTVTYSIVSGNEMLADFAVDEHTGWISTRKIFDRDEPAKEK----- 180
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+Y+TV A DNG P+L CT+K+ + DINDN F
Sbjct: 181 -----------------EVYVTVQASDNGNPRLDAVCTLKVKITDINDNTAQF 216
>gi|194754781|ref|XP_001959673.1| GF12987 [Drosophila ananassae]
gi|190620971|gb|EDV36495.1| GF12987 [Drosophila ananassae]
Length = 1508
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D DP I+Y I++AP ER+KF I+ +G++ T
Sbjct: 109 FMVKAVDPDPDQE---IRYSIVQAPVERSKFFINPTSGVIVT------------------ 147
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P EK +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 148 ----AHTFDRDEPIHEKFVFVTVQATDNGLPALDDVCTFNVTIEDINDNAPVFNKARY 201
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D + + + R F+ID TG + L DR+ E++ Y
Sbjct: 432 MQVRAFDMDGTPANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 482
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + Y
Sbjct: 483 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPYFQQTMY 528
>gi|195346279|ref|XP_002039693.1| GM15758 [Drosophila sechellia]
gi|194135042|gb|EDW56558.1| GM15758 [Drosophila sechellia]
Length = 1507
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y I+++P ER KF I+ TG++ T + DRD+P E
Sbjct: 108 LTVEAVDPDPDQ---VIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHE------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 159 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 200
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 431 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 482 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 527
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 769 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 814
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 815 VPRQSAVSILHLVIGDVNDN 834
>gi|517102|dbj|BAA05942.1| DE-cadherin [Drosophila melanogaster]
Length = 1507
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y I+++P ER KF I+ TG++ T + DRD+P E
Sbjct: 108 LTVEAVDPDPDQ---VIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHE------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 159 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 200
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 431 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 482 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 527
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 769 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 814
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 815 VPRQSAVSILHLVIGDVNDN 834
>gi|17136470|ref|NP_476722.1| shotgun [Drosophila melanogaster]
gi|13124007|sp|Q24298.2|CADE_DROME RecName: Full=DE-cadherin; AltName: Full=Protein shotgun; Flags:
Precursor
gi|7291227|gb|AAF46659.1| shotgun [Drosophila melanogaster]
Length = 1507
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y I+++P ER KF I+ TG++ T + DRD+P E
Sbjct: 108 LTVEAVDPDPDQ---VIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHE------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 159 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 200
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 431 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 482 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 527
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 769 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 814
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 815 VPRQSAVSILHLVIGDVNDN 834
>gi|195486664|ref|XP_002091601.1| GE13751 [Drosophila yakuba]
gi|194177702|gb|EDW91313.1| GE13751 [Drosophila yakuba]
Length = 1491
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y I+++P ER KF I+ TG++ T + DRD+P E
Sbjct: 92 LTVEAVDPDPDQ---VIRYSIVQSPFERPKFFINPTTGVIFTTHTFDRDEPIHE------ 142
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 143 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 184
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 415 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 465
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 466 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 511
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 753 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 798
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 799 VPRQSAVSILHLVIGDVNDN 818
>gi|194881766|ref|XP_001974992.1| GG20811 [Drosophila erecta]
gi|190658179|gb|EDV55392.1| GG20811 [Drosophila erecta]
Length = 1507
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y ++++P ER KF I+ TG++ T
Sbjct: 108 LTVEAVDPDPDQ---VIRYSLVQSPFERPKFFINPSTGVIFT------------------ 146
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P EK +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 147 ----THTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 200
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 431 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 482 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 527
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 769 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 814
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 815 VPRQSAVSILHLVIGDVNDN 834
>gi|307196225|gb|EFN77871.1| DE-cadherin [Harpegnathos saltator]
Length = 1448
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V +DRD+P +EKE Y+TV A DNG PQL D CT K+TV DINDNEP+FD+V Y
Sbjct: 9 VMFIDRDEPFKEKEFYLTVHASDNGRPQLDDLCTFKVTVNDINDNEPVFDKVAY 62
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 29/111 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++ A D D NG ++RI + + +AKFSI K L+AL
Sbjct: 616 ELKARDYDSQENGPPFEFRIDDSADDEVKAKFSIHK-----SALHAL------------- 657
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
Q DR E+ K I + DNGTP ++ T+ + + D+NDN+
Sbjct: 658 ------QIFDR---EQRKSYDIPIAITDNGTPSMTGTSTLTVIIGDVNDND 699
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
M+V ATD D NG T++Y + K + A F ID ETGI+ A+D D R I
Sbjct: 77 MRVSATDFDDGENG-TVRYNLSAKLADDEAYFRIDSETGIIYLKKAIDHDPGYRFNMIAR 135
Query: 60 TTDI----RVQALDRD 71
TD+ + A+D D
Sbjct: 136 ATDLGKPPKSSAIDLD 151
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 68 LDRDDPEREKEIYITVIA--EDNGTPQLSDACTMKITVEDINDNEPMFD 114
LDRD P + VIA ED T L ++ + IT+ DINDN P D
Sbjct: 550 LDRDPPNGYSIWNVIVIAKDEDGSTTALRNSIIVNITLLDINDNAPFLD 598
>gi|198461085|ref|XP_002138947.1| GA24111 [Drosophila pseudoobscura pseudoobscura]
gi|198137230|gb|EDY69505.1| GA24111 [Drosophila pseudoobscura pseudoobscura]
Length = 1505
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD DP I+Y ++++ ER KF I+ TG++ T + DRD+
Sbjct: 103 FMVQATDPDP---NQEIRYSLVQSRSERPKFFINPTTGVIVTGHTFDRDE---------- 149
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P EK +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 150 ------------PIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNPPVFNKARY 195
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D + + + + R F+ID+ TG + L DR+ E++ Y
Sbjct: 426 MQVRAFDMDGTAANNIVSFELAD---NRDFFAIDRHTGNITALTTFDRE----ERDFY-- 476
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 477 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQTKY 522
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 43 LYALDRDDPEREKEIYITTDIR-VQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTM 99
+Y++ +DD ++ I + +R +Q LDRD P K +I I+ ED L +
Sbjct: 656 VYSIVKDDYKKLLTIDNSGCLRLIQPLDRDPPNGHKNWQILISASDEDGVGTTLKSVKAV 715
Query: 100 KITVEDINDNEPMF 113
IT++DINDN P
Sbjct: 716 TITLQDINDNAPFL 729
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 29/111 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ + D D NG Y I +P + KFSID + ++
Sbjct: 747 VQLQSNDFDDVQNGPPYTYGIDSEASPDIKTKFSIDNDYLFANVMF-------------- 792
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
D E +KE YI + D+G P+ S + + + D+NDN
Sbjct: 793 -------------DREEQKEYYIPIRISDSGVPRQSAVSILHLIIGDVNDN 830
>gi|195170226|ref|XP_002025914.1| GL10186 [Drosophila persimilis]
gi|194110778|gb|EDW32821.1| GL10186 [Drosophila persimilis]
Length = 1356
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD DP I+Y ++++ ER KF I+ TG++ T + DRD+
Sbjct: 103 FMVQATDPDP---NQEIRYSLVQSRSERPKFFINPTTGVIVTGHTFDRDE---------- 149
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P EK +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 150 ------------PIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNPPVFNKARY 195
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 43 LYALDRDDPEREKEIYITTDIR-VQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTM 99
+Y++ +DD ++ I + +R +Q LDRD P K +I I+ ED L +
Sbjct: 582 VYSIVKDDYKKLLTIDNSGCLRLIQPLDRDPPNGHKNWQILISASDEDGVGTTLKSVKAV 641
Query: 100 KITVEDINDNEPMF 113
IT++DINDN P
Sbjct: 642 TITLQDINDNAPFL 655
>gi|195122240|ref|XP_002005620.1| GI20567 [Drosophila mojavensis]
gi|193910688|gb|EDW09555.1| GI20567 [Drosophila mojavensis]
Length = 1521
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD DP I Y ++++ +RAKF I +G++ T
Sbjct: 118 FTVQATDPDP---NQEITYSLVQSAFDRAKFVIHPTSGVIVT------------------ 156
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P EK +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 157 ----AHIFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNPPVFNKARY 210
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 27/110 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGI-VKTLYALDRDDPEREKEIYI 59
+Q+ A D D P NG F ID E I +K+ +++D D Y+
Sbjct: 763 VQLLANDYDEPQNGPPF------------TFGIDSEASIDIKSKFSIDND--------YL 802
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+++ D E++KE +I + D G P+ S + + + D+NDN
Sbjct: 803 FANVQF------DREQQKEYFIPIRISDAGVPKQSSVSILHLIIGDVNDN 846
>gi|195382912|ref|XP_002050172.1| GJ20342 [Drosophila virilis]
gi|194144969|gb|EDW61365.1| GJ20342 [Drosophila virilis]
Length = 1477
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D DP I Y ++++ ER KFSI + +G++ T + DRD+P EK +
Sbjct: 74 FTVQAVDPDP---NQEIHYSLVQSASERPKFSIHETSGVIMTSHIFDRDEPIHEKFV--- 127
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++TV A DNG P L D CT +T+ DINDN P+F++ +Y
Sbjct: 128 -------------------FVTVQATDNGLPPLDDVCTFNVTIVDINDNPPVFNKARY 166
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 27/110 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGI-VKTLYALDRDDPEREKEIYI 59
+Q+ A D D P NG F ID + +KT +++D D Y+
Sbjct: 719 VQLLANDYDEPQNGPPF------------TFGIDSDASSDIKTKFSIDND--------YL 758
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+++ D E +KE +I + D G P+ S + + + D+NDN
Sbjct: 759 FANVQF------DREVQKEYFIPIRISDAGVPKQSSVSILHLIIGDVNDN 802
>gi|195027149|ref|XP_001986446.1| GH21371 [Drosophila grimshawi]
gi|193902446|gb|EDW01313.1| GH21371 [Drosophila grimshawi]
Length = 1525
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D DP I Y ++++ +R KF I +G++ T
Sbjct: 120 FTVQAVDPDP---NQEITYSLVQSAFDRPKFVIHPNSGVIMT------------------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD+P EK +++TV A DNG P L D CT +T+EDINDN P+F++ +Y
Sbjct: 159 ----AHTFDRDEPIHEKFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNPPVFNKARY 212
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A D D P NG + I +P + KFSID + Y
Sbjct: 765 VQLLANDYDEPQNGPPFTFGIDSDASPDIKTKFSIDND---------------------Y 803
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+ +++ D E +KE +I + D G P+ S + + + D+NDN
Sbjct: 804 LFANVQF------DREMQKEYFIPIRISDAGIPKQSSVSILHLIIGDVNDN 848
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 44 YALDRDDPEREKEIYITTDIR-VQALDRDDPEREKEIYITVIAEDN---GTPQLSDACTM 99
Y++ ++D +R I + +R +Q LDRD P K + + A D GT L +
Sbjct: 675 YSIVKEDHKRLLTIDNSGCLRLIQPLDRDPPNGHKSWQVLISASDQDGVGT-TLKSVKPV 733
Query: 100 KITVEDINDNEPMF 113
IT+EDINDN P
Sbjct: 734 IITLEDINDNAPFL 747
>gi|195585278|ref|XP_002082416.1| GD25232 [Drosophila simulans]
gi|194194425|gb|EDX08001.1| GD25232 [Drosophila simulans]
Length = 536
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 22/96 (22%)
Query: 23 KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYIT 82
++P ER KF I+ TG++ T + DRD+P E K +++T
Sbjct: 220 QSPFERPKFFINPSTGVIFTTHTFDRDEPIHE----------------------KFVFVT 257
Query: 83 VIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 258 VQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 293
>gi|158286928|ref|XP_309012.4| AGAP006732-PA [Anopheles gambiae str. PEST]
gi|157020702|gb|EAA04348.5| AGAP006732-PA [Anopheles gambiae str. PEST]
Length = 1267
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD P TI+Y I + F+ID++TG + + Y DRD P R+ E
Sbjct: 58 LRVTATD---PDQSQTIKYSIANETRQEQLFAIDEDTGEISSAYIFDRDPPYRDTEF--- 111
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
YITV A DNG P L D CT+K+ + DINDN P+FD+
Sbjct: 112 -------------------YITVRATDNGQPSLDDVCTIKLMILDINDNPPVFDK 147
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD P TI+Y I ++ F+ID++TG + + Y DRD P R+ E
Sbjct: 313 IRVTATD---PDQSQTIKYSIANETRQQQLFAIDEDTGEIFSAYIFDRDPPYRDTEF--- 366
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
YITV A DNG P L D CT+K+ + DINDN P+FD+ Y
Sbjct: 367 -------------------YITVRATDNGQPYLDDVCTIKVKILDINDNPPVFDKDYY 405
>gi|321478108|gb|EFX89066.1| hypothetical protein DAPPUDRAFT_304677 [Daphnia pulex]
Length = 1533
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 24/116 (20%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D S G I + I++A G +F +D TG +++
Sbjct: 104 VRAYDNDTDS-AGEIFFTILRA-GSEKEFEVDPVTGTIRS-------------------- 141
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD+P REK Y+TV A D GTP L CT +T+ DINDN PMFD+ Y
Sbjct: 142 --SKSFDRDEPAREKIAYVTVKATDRGTPPLEAICTFNVTIGDINDNAPMFDKSAY 195
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D ++Y + + KF ID+ TG +KT LDR+ E++ Y
Sbjct: 425 LTVQATDRDATYPNNWVRYELRDF---KDKFEIDRNTGDIKTKVKLDRE----ERKSYPL 477
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T V A D KE +T+ +G P S A +I V D+NDN P F + +Y
Sbjct: 478 T---VVAFD------GKESALTL----DGLPNQS-AKRFQIEVADVNDNAPFFPQSEY 521
>gi|61162135|dbj|BAD91056.1| Cj-cadherin [Caridina japonica]
Length = 3000
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ VHATD D NG ++Y I++ P ++ KF++D ETG V T DR+
Sbjct: 902 ITVHATDEDKGVNG-QVRYSIVQQPNQKGTKFTVDPETGEVTTNKVFDREG--------- 951
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K + +TV A DNG P L C+ + + DINDN P+FDR +Y
Sbjct: 952 --------------EDGKFVSVTVKATDNGDPSLEGVCSFTVEITDINDNPPLFDRQKY 996
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDR-DDPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K YA+DR D R+ I + +++Q LDR++ R + ++A D+G P
Sbjct: 1804 QGGQSKVSYAIDRASDRRRQFAIDSSGTVKIQRTLDREENPRHS---VKILAIDDGLPAK 1860
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V+DINDN P F
Sbjct: 1861 TATATLTVIVQDINDNAPRF 1880
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDRD P+ TV A+D G L +++ ++DINDN P+F ++ Y
Sbjct: 1499 LDRDHPKGRPTWRFTVFAQDEGGTGLVGYADVQVNLKDINDNGPVFPQMVY 1549
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE +TV E+NG QL+ T+ + +ED+ND P+F
Sbjct: 1171 DYESIKEYNLTVRVENNGPQQLASEATIYVVLEDVNDEIPLF 1212
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E +KE ++ ++ +D GTPQ++ T+ I + D NDN+
Sbjct: 1949 ISSLRTFDREVQKEYHVPIVIKDAGTPQMTGTSTLTIIIGDENDNK 1994
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV+A D D + YRI+ +P RA + I + TG + T DR+ EK+ Y
Sbjct: 1232 QVNAIDKDGTYPNNEVLYRIVDSPRNEGRAFYEIRERTGEIFTKVEFDRE----EKQAYA 1287
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D R NG P ++I + D NDN P FD+ Y
Sbjct: 1288 ---LEVEARDGAASARPNA---------NGRPNTVTKF-IRIGIADKNDNPPFFDKNLY 1333
>gi|61162138|dbj|BAD91057.1| Le-cadherin [Ligia exotica]
Length = 3009
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ VHATD D NG ++Y I++ P ++ KF+++ ETG V T DR+
Sbjct: 913 ITVHATDEDKGGNG-QVRYSIVQQPNQKGTKFTVNPETGEVTTNKVFDREG--------- 962
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K + +TV A DNG P L C+ + + DINDN P+FDR +Y
Sbjct: 963 --------------EDGKFVSVTVKATDNGDPSLEGVCSFTVEITDINDNPPLFDRQKY 1007
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDR-DDPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K YA+DR D R+ I T +++Q +LDR++ R + ++A D+GTP
Sbjct: 1815 QGGNSKVSYAIDRASDRRRQFTIDDTGTVKIQRSLDREENPRHS---VKILAIDDGTPAK 1871
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V+DINDN P F
Sbjct: 1872 TATATLTVIVQDINDNAPRF 1891
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 49 DDPEREK-EIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
D+P++ K E+ TT + LDRD P+ TV A+D G L +++ ++D
Sbjct: 1488 DNPDKSKFEVNRTTGAIFVRKPLDRDHPKGRPTWRFTVFAQDEGGNGLVGYADVQVNLKD 1547
Query: 106 INDNEPMFDRVQY 118
INDN P+F ++ Y
Sbjct: 1548 INDNAPIFPQMVY 1560
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE +TV E+NG QL+ T+ + +ED+ND P+F
Sbjct: 1182 DYESIKEYNLTVRVENNGPQQLASEATIYVVLEDVNDEIPLF 1223
>gi|270008135|gb|EFA04583.1| DN cadherin-like protein [Tribolium castaneum]
Length = 1148
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 560 IKVHATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 609
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 610 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 654
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRD 71
N T+ YR++ PG A +T T Y R D + DI+V LD
Sbjct: 879 NNPTVFYRLM--PGSTA------QTNKYHTFYLQQRPD-----NGFTWADIKVNHPLDY- 924
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 925 --ETIKEYNLTIRVENNGAQQLASEATVYIQLEDVNDEIPLF 964
>gi|357610680|gb|EHJ67094.1| DN cadherin-like protein [Danaus plexippus]
Length = 925
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 440 IKVHATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 489
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 490 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 534
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRD 71
N T+ YR++ PG A +T T Y R D + DI+V LD
Sbjct: 730 NNPTVFYRLM--PGSTA------QTNKFHTFYLQQRAD-----NGFTWADIKVNHPLDY- 775
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 776 --ESIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 815
>gi|61162132|dbj|BAD91055.1| Af2-cadherin [Artemia franciscana]
Length = 3005
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 863 IKVHATDADKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVYTNKVFDREG--------- 912
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 913 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 957
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 36 ETGIVKTLYALDRDDPEREKEIYITTDIRV---QALDRDDPEREKEIYITVIAEDNGTPQ 92
+ G K YA+DR +R ++ +I T+ V ++LDR+D R + + ++A D+G P
Sbjct: 1765 QGGKSKVSYAIDRAS-DRRRQFFINTNGTVTIQRSLDREDLPRHQ---VKILAIDDGIPT 1820
Query: 93 LSDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1821 KTATATLTVVVLDINDNAPRF 1841
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D ++P K EIY+ ++ LDRD P + TV A+D G L
Sbjct: 1434 GIDPENPSNHKFDINRTTGEIYV-----LKPLDRDQPHGRPQWRFTVFAQDEGGEGLVGY 1488
Query: 97 CTMKITVEDINDNEPMF 113
+++ ++DINDN P+F
Sbjct: 1489 ADVQVNLKDINDNAPIF 1505
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L D E++KE ++ ++ +D+G+P +S T+ I + D+NDN+
Sbjct: 1910 VSSLRSFDREQQKEYHVPIVIKDSGSPAMSATSTLTIVIGDVNDNK 1955
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRD 71
N T+ YR+I+ G A +T T Y R+D + DI+V LD
Sbjct: 1088 NNPTVFYRLIR--GSTA------QTNKYDTFYLQQRND-----NGHTWADIKVNHPLDY- 1133
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL T+ I +ED+ND P+F
Sbjct: 1134 --ESIKEYNLTIRVENNGVQQLGSEATIYIVLEDVNDEIPLF 1173
>gi|189237687|ref|XP_969192.2| PREDICTED: similar to Neural-cadherin precursor (Cadherin-N protein)
(DN-cadherin) [Tribolium castaneum]
Length = 3035
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 908 IKVHATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 957
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 958 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 1002
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 36 ETGIVKTLYALDRDDPEREKEIYITTDIRV---QALDRDDPEREKEIYITVIAEDNGTPQ 92
+ G K YA+DR +R+++ I D V ++LDR+D R + + ++A D+G P
Sbjct: 1810 QGGKSKVSYAIDRIS-DRKRQFSINQDGTVSIQRSLDREDTPRHQ---VKILAIDDGIPP 1865
Query: 93 LSDACTMKITVEDINDNEPMFDR 115
+ T+ + V+DINDN P F R
Sbjct: 1866 KTATATLTVIVQDINDNAPTFLR 1888
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRD 71
N T+ YR++ PG A +T T Y R D + DI+V LD
Sbjct: 1133 NNPTVFYRLM--PGSTA------QTNKYHTFYLQQRPD-----NGFTWADIKVNHPLDY- 1178
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1179 --ETIKEYNLTIRVENNGAQQLASEATVYIQLEDVNDEIPLF 1218
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1479 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1538
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P F + Y
Sbjct: 1539 NLKDINDNPPTFPQGIY 1555
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 41/124 (33%)
Query: 1 MQVHATDVD--PPSNGGTIQYRIIKAPGE----RAKFSIDKE--------TGIVKTLYAL 46
+++ ATD D SNG Q+R+ PG RA F ++++ IV +L +
Sbjct: 1904 VEILATDDDDRSKSNGPPFQFRL--DPGADDIIRASFKVEQDQKGANGDGMAIVSSLRSF 1961
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
DR E++KE I ++ +D+G P +S T+ + + D+
Sbjct: 1962 DR-------------------------EQQKEYLIPIVIKDHGNPAMSGTSTLTVVIGDV 1996
Query: 107 NDNE 110
NDN+
Sbjct: 1997 NDNK 2000
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D PS G +I+ +I+ F I+ ETG++KT
Sbjct: 1570 MTMTAVDYDDPSEGTNARLVYSIEKNVIEEETGSPIFEIESETGVIKTA----------- 1618
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1619 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1663
Query: 115 RVQY 118
+ ++
Sbjct: 1664 KDEW 1667
>gi|328714938|ref|XP_001945353.2| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
Length = 2288
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 182 LKVHATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 231
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +T+ A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 232 -----------DD---GKFVSVTIKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 276
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D D+P K EI++ ++ LDRD P + TV A+D G L
Sbjct: 753 GIDPDNPANSKFDINRTSGEIFV-----LKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGY 807
Query: 97 CTMKITVEDINDNEPMFDRVQY 118
+++ ++DINDN P+F + Y
Sbjct: 808 ADVQVNLKDINDNAPVFPQGVY 829
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPE 74
T+ YR++ PG A +T T Y R D + DI+V LD E
Sbjct: 410 TVFYRLM--PGSTA------QTNKFHTFYLQQRQD-----NGFTWADIKVNHPLDY---E 453
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 454 TIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 492
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 36 ETGIVKTLYALDR-DDPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K YA+DR D R+ I + +Q LDR++ R + + ++A D+G P
Sbjct: 1084 QGGKSKVSYAIDRVSDRRRQFRISQEGTVSIQRQLDREETPRHQ---VKILAIDDGVPPK 1140
Query: 94 SDACTMKITVEDINDNEPMFDR 115
+ T+ + V+DINDN P R
Sbjct: 1141 TATATLTVIVQDINDNAPKLLR 1162
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G P ++ T+ + + D+NDN+
Sbjct: 1229 ISSLRSFDREQQKEYLIPIVIKDSGNPAMTGTSTLTVIIRDVNDNK 1274
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 844 MTMTAVDYDDPAEGTNAKLIYSIEKNVIEEETGTPIFEIESDTGVIKTA----------- 892
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 893 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 937
Query: 115 RVQY 118
+ ++
Sbjct: 938 KEEW 941
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV+A D D + Y ++ +P K F I+ ETG V T DR+ ++ Y
Sbjct: 512 QVNAIDKDGTFPNNRVYYYVVDSPRNEGKDYFEINTETGEVFTKIVFDRE----KQGAYA 567
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D R +NG S + ++I + D NDN P FD+ Y
Sbjct: 568 ---LEVEARDGAPSARP----------NNGEAPNSVSKFIRIGIADKNDNPPYFDKALY 613
>gi|61162130|dbj|BAD91054.1| Af1-cadherin [Artemia franciscana]
Length = 1566
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 22/105 (20%)
Query: 14 GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
G ++Y II++ +F+++ TG + T + DRD+P
Sbjct: 144 AGKVRYEIIRSQSAEKQFNVNSYTGEITT----------------------AKVFDRDEP 181
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK +Y+TV A D G P L CT +T+ D NDN P+FD+ Y
Sbjct: 182 KREKLLYVTVKAVDEGFPALDVLCTFSVTITDKNDNAPIFDKNDY 226
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D S + YR++ FSID ETG ++TL LDR+ E Y
Sbjct: 460 LRIRAIDKDGTSPNNKVTYRLLS---NTDTFSIDSETGEIRTLKRLDRE----ETSSYAV 512
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T VQA D P + +G P + K+ V D NDN P F++ Y
Sbjct: 513 T---VQAQD-GAPSSLRS---------DGLPNMYQK-KFKVEVLDQNDNPPRFEQPTY 556
>gi|242021157|ref|XP_002431012.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212516241|gb|EEB18274.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 996
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHA D D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 571 IKVHAIDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 620
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 621 -----------DDG---KFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 665
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 727 DYESIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 768
>gi|328702680|ref|XP_003241980.1| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
Length = 1040
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++VHATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 945 LKVHATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 994
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
DD K + +T+ A D G P L C+ + + D+NDN P+FDR
Sbjct: 995 -----------DD---GKFVSVTIKATDQGDPSLEGVCSFTVEITDVNDNPPLFDR 1036
>gi|328701666|ref|XP_003241675.1| PREDICTED: protein dachsous-like [Acyrthosiphon pisum]
Length = 3383
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 26/115 (22%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HATD D +NG + Y +I + E + F +D G + ++ LD + R
Sbjct: 890 HATDPDSGANG-QVHYELIASTQEPSYFQVDHNRGTISLIHGLDYETVHR---------- 938
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +TVIA D+G P LSD T+ + V+DINDN P+F+R Y
Sbjct: 939 ---------------LTVTVIARDSGVPSLSDNMTLVVDVQDINDNPPVFERPHY 978
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
V DR D ER+ E V+A DNG PQ L+ T+ +T+ D+NDNEP+FD+ Y
Sbjct: 501 VATRDRMDCERDPEPTFVVLAIDNGRPQQLTGTTTVHVTIHDLNDNEPIFDQSFY 555
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVED 105
R REK+ + D+++ LDR+ Y+ VI A D G P L A T+ +TV D
Sbjct: 164 RLSSHREKDDVLYLDLQINGYLDRE----TTAAYLLVIEAYDGGLPPLKGAMTVNVTVLD 219
Query: 106 INDNEPMFDRVQY 118
+NDN+P F++ +Y
Sbjct: 220 VNDNQPAFNQSRY 232
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSID-KETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D N + Y ++ + A F ID ++GIVKT LD + + K
Sbjct: 2168 VRVAAVDLDDNENS-RLSYHLVDGNHDNA-FVIDPTDSGIVKTNIVLDSEIRDTYK---- 2221
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TVIA D GTPQ++ T+++ V DINDN P F
Sbjct: 2222 ---------------------LTVIATDEGTPQMTGMATIRVIVIDINDNRPSF 2254
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D N T+ Y I+K +F ID+ TG+++T +LD +
Sbjct: 1205 VTVKATDPDQ-GNNATLTYSILKGRDSDGNGEFFIDRITGVIRTKVSLDHE--------- 1254
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
EK +Y ++V A DNG P +++ V D+NDN P F
Sbjct: 1255 -----------------EKSMYRLSVAATDNGHPPKQTIRMLRVEVLDLNDNRPTF 1293
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QVHATDVD NG ++Y I + ++ F++D++TG++ LD + E +
Sbjct: 247 LQVHATDVDDGDNG-VVEYSISRRQSDKEGYFTVDRQTGVISVNRPLDYETREVHE---- 301
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ V+A+D G L + + V D+NDN+P
Sbjct: 302 ---------------------LVVVAKDRGDQPLETTAFVTVRVADVNDNQP 332
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++VIA D G+P L + T + V D+NDN P+F +Y
Sbjct: 404 DRESRPNYTLSVIATDAGSPPLHASKTFHLLVTDVNDNRPVFAAPEY 450
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID +TGI+ T+ LDR ER+ ++ V+A D G
Sbjct: 1872 FQIDNKTGIITTVENLDR-------------------------ERQPNYWLQVVARDGGK 1906
Query: 91 PQLSDACTM-KITVEDINDNEPMFDRVQY 118
+ T+ + V D+NDN P+F + +
Sbjct: 1907 YNPRSSTTLVYVKVLDVNDNVPVFTKYPF 1935
>gi|427781127|gb|JAA56015.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1400
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 890 IKVKARDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 939
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 940 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 984
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1159 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 1200
>gi|170065060|ref|XP_001867785.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882207|gb|EDS45590.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1033
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 483 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 532
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 533 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 577
>gi|345493993|ref|XP_003427197.1| PREDICTED: LOW QUALITY PROTEIN: neural-cadherin-like [Nasonia
vitripennis]
Length = 3062
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 940 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVSTNKVFDREG--------- 989
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 990 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 1034
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 36 ETGIVKTLYALDRDDPEREKEIYITTDIRV---QALDRDDPEREKEIYITVIAEDNGTPQ 92
+ G K Y++DR +R+++ YI + V ++LDR++ R + + ++A D+G P
Sbjct: 1848 QGGKSKVSYSIDRSS-DRKRQFYIFENGTVSIQRSLDREETPRHQ---VKILAIDDGIPP 1903
Query: 93 LSDACTMKITVEDINDNEPMF 113
+ T+ + V+DINDN P F
Sbjct: 1904 KTATATLTVIVQDINDNPPTF 1924
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D D+P K EIY+ ++ LDRD P + TV A+D G L
Sbjct: 1517 GIDPDNPANSKFDINRTSGEIYV-----LKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGY 1571
Query: 97 CTMKITVEDINDNEPMFDRVQY 118
+++ ++DINDN P+F + Y
Sbjct: 1572 ADVQVNLKDINDNAPLFPQGVY 1593
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P G +I+ +I+ F I+ ETG++KT
Sbjct: 1608 MTMTAVDYDDPHEGTNAKLVYSIEKNVIEEETGSPIFEIESETGVIKTA----------- 1656
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1657 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1701
Query: 115 RVQY 118
+ ++
Sbjct: 1702 KDEW 1705
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L D E++KE I ++ D G+P +S T+ + + D NDN+
Sbjct: 1993 VSSLRAFDREQQKEYLIPIVIRDAGSPFMSGTSTLTVIIGDANDNK 2038
>gi|158298604|ref|XP_001238041.2| AGAP009725-PA [Anopheles gambiae str. PEST]
gi|157013964|gb|EAU76025.2| AGAP009725-PA [Anopheles gambiae str. PEST]
Length = 1325
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 914 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 963
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 964 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKY 1008
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T + T Y R D+ + +I + + D E
Sbjct: 1146 TVFYRLM--PGSTA------QTNKLHTFYLQQRPDNGDTWADIKVNHPL--------DFE 1189
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1190 MIKEYNLTVRVENNGAQQLASEATVYIQLEDVNDEIPLF 1228
>gi|241735373|ref|XP_002413935.1| conserved hypothetical protein [Ixodes scapularis]
gi|215507789|gb|EEC17243.1| conserved hypothetical protein [Ixodes scapularis]
Length = 432
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 28 IKVKAKDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 77
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 78 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 122
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A+D D +NG + Y + PG A FSI+ ++G + ALDRD
Sbjct: 137 LRVSASDEDADNNGAIV-YNLTAPYDPGNLAYFSINPDSGWISLQKALDRD--------- 186
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + IA D G PQ + I V D +N P++D+ Y
Sbjct: 187 -------------------QYQLRAIALDKGVPQHQATVEVMIDVVDRANNPPIWDQPVY 227
>gi|427779553|gb|JAA55228.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
pulchellus]
Length = 2970
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 824 IKVKARDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 873
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 874 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 918
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 25 PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84
PG +KF+I+ TG EIY+ ++ LDRD P + TV
Sbjct: 1399 PGN-SKFAINTTTG-----------------EIYV-----LKPLDRDLPHGRSQWRFTVF 1435
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
AED G L + + ++D+NDN P F Y
Sbjct: 1436 AEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIY 1469
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G + Y +DR D +R+ +I + +Q LDR+D R + + ++A D+G P
Sbjct: 1723 QGGKSRVSYMIDRSSDKKRQFKINPNGVVEIQRTLDREDIPRHQ---VKILAIDDGVPSR 1779
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1780 TATATLTVVVSDINDNPPRF 1799
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1093 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 1134
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V++ + D E +KE + ++ +DNG P L+ T+ + + D+NDN
Sbjct: 1868 VRSRETFDRETQKEYLVPILIKDNGNPSLTGTSTLTVIIGDVNDN 1912
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGT----PQLSDACTMKITVEDINDNEPMFDR 115
+ LD +D ++ IT+ DNG P +D +K+ V+DINDN+P F+R
Sbjct: 1642 AKPLDYEDLQQRFGFNITIQVSDNGGESTDPYHADYAKVKVRVKDINDNKPEFER 1696
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 33/124 (26%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + ATD D P+ G +I+ + GE F+ID+ETG++ T
Sbjct: 1484 MTMTATDYDDPNEGNNARLAYSIEQNQVNENGELI-FTIDEETGVISTA----------- 1531
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR E E I V+A D G L T I ++DIND P F
Sbjct: 1532 ----------VCCLDR---ETNPEYTIKVVAVDGGG--LKGTGTATIKIKDINDMPPEFT 1576
Query: 115 RVQY 118
+ +
Sbjct: 1577 KKDW 1580
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+KE + ++ +DNG P L+ T+ + + D+NDN
Sbjct: 1921 QKEYLVPILIKDNGNPSLTGTSTLTVIIGDVNDN 1954
>gi|427798031|gb|JAA64467.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 876
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 439 IKVKARDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 488
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 489 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 533
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 727 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 768
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A+D D +NG + Y + P A FSI+ ++G + AL +
Sbjct: 548 LRVSASDEDADNNGAIV-YNLTAPYDPDHLAYFSINPDSGWISLQKALXXXFSINPDSGW 606
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ +ALDRD + + IA D G PQ + I V D +N P++D+ Y
Sbjct: 607 ISLQ---KALDRD------QYQLRAIALDKGVPQHQATVEVIIDVVDRANNPPIWDQPVY 657
>gi|427795051|gb|JAA62977.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 2741
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 595 IKVKARDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 644
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 645 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 689
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
Query: 25 PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84
PG +KF+I+ TG EIY+ ++ LDRD P + TV
Sbjct: 1170 PGN-SKFAINTTTG-----------------EIYV-----LKPLDRDLPHGRSQWRFTVF 1206
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
AED G L + + ++D+NDN P F Y
Sbjct: 1207 AEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAIY 1240
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G + Y +DR D +R+ +I + +Q LDR+D R + + ++A D+G P
Sbjct: 1494 QGGKSRVSYMIDRSSDKKRQFKINPNGVVEIQRTLDREDIPRHQ---VKILAIDDGVPSR 1550
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1551 TATATLTVVVSDINDNPPRF 1570
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 864 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 905
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V++ + D E +KE + ++ +DNG P L+ T+ + + D+NDN
Sbjct: 1639 VRSRETFDRETQKEYLVPILIKDNGNPSLTGTSTLTVIIGDVNDN 1683
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGT----PQLSDACTMKITVEDINDNEPMFDR 115
+ LD +D ++ IT+ DNG P +D +K+ V+DINDN+P F+R
Sbjct: 1413 AKPLDYEDLQQRFGFNITIQVSDNGGESTDPYHADYAKVKVRVKDINDNKPEFER 1467
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 33/124 (26%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + ATD D P+ G +I+ + GE F+ID+ETG++ T
Sbjct: 1255 MTMTATDYDDPNEGNNARLAYSIEQNQVNENGELI-FTIDEETGVISTA----------- 1302
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR E E I V+A D G L T I ++DIND P F
Sbjct: 1303 ----------VCCLDR---ETNPEYTIKVVAVDGGG--LKGTGTATIKIKDINDMPPEFT 1347
Query: 115 RVQY 118
+ +
Sbjct: 1348 KKDW 1351
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+KE + ++ +DNG P L+ T+ + + D+NDN
Sbjct: 1692 QKEYLVPILIKDNGNPSLTGTSTLTVIIGDVNDN 1725
>gi|427791591|gb|JAA61247.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1124
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D+D NG ++Y I++ P ++ KFS+D+ TG ++T DR+
Sbjct: 576 IKVKARDLDKGHNG-QVRYSIVQQPNQKGTKFSVDELTGEIRTNKVFDREG--------- 625
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + DINDN P+FDR +Y
Sbjct: 626 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDINDNPPLFDRQEY 670
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 845 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 886
>gi|307173873|gb|EFN64630.1| Neural-cadherin [Camponotus floridanus]
Length = 1186
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 907 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 956
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 957 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 1001
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+HA D +N I Y I+ E KFSID TG + + +LD
Sbjct: 3238 LQIHAASRDIEANA-EITYSIVSG-NEHGKFSIDSTTGAIFIIESLDY------------ 3283
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3284 -------------ESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTY 3328
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN + Y II + F+ID G +K LDR
Sbjct: 3343 ITVMADDADGPSNN-RVHYTIIDG-NQGNPFTIDPTRGEIKVTKLLDR------------ 3388
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3389 -------------EKISGYTLTVQASDNGSPPKLNTTTVNIDVSDVNDNPPVFSKGNY 3433
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG ++Y ++ + KF+I+ TG+VK + LDR+ E+ IY
Sbjct: 837 IQIGATDKDLGANG-EVKYSLLT---DTDKFTINSVTGVVKVVGVLDRE----EQHIYF- 887
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD P E +++ TVI +K+ VED+NDN P F
Sbjct: 888 --LKIEA--RDQPTEEPQLFSTVI--------------LKVAVEDVNDNPPKF 922
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 72/187 (38%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD---------- 50
MQV ATD D SN I Y + E KF + +TG +KTL ALDR+
Sbjct: 3040 MQVSATDADIRSNA-EITYTLHGTGAE--KFRLTPDTGELKTLMALDREQQAVYHLLVKA 3096
Query: 51 -----------------------PEREKEIYITTDI----------RVQALDRD------ 71
PE + Y T RVQA D D
Sbjct: 3097 TDGGGRFCQANIILTLEDVNDNAPEFTTDTYSITVFENTEPGTLLTRVQATDADAGMHSL 3156
Query: 72 ------------------DPEREKEIY-ITVIAEDNGTPQ-LSDACTMKITVEDINDNEP 111
+R++ +Y +T+ A D G P+ LS ++ ++V DINDN P
Sbjct: 3157 TDILSCSQTYSIISLVLSXNQRQQTVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPP 3216
Query: 112 MFDRVQY 118
+F++ +Y
Sbjct: 3217 VFEQREY 3223
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD D +N G I Y +++ E F ID TG++ T LD + ++ K
Sbjct: 2301 QVSATDADSGTNRG-ISYHLVEDNSESHDYFHIDSSTGLILTAKTLDYEQIKQHK----- 2354
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G LS + + V D+NDN P+F ++ Y
Sbjct: 2355 --------------------LLIRAVDGGMLPLSSDTIVTVDVTDLNDNPPLFSQLLY 2392
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y+I++ P R F+ID TG ++T+ +LD Y
Sbjct: 1787 LVIRAADADKESNA-LLVYQIVE-PSVRQYFAIDSSTGAIRTVMSLD----------YEE 1834
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
T+I + +V D G P+L A + I V DIND P+F R Y
Sbjct: 1835 TNI---------------FHFSVQVHDTGIPRLYAEYAANVTIYVIDINDCPPVFSRELY 1879
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A D+D NG + +I A E + F +D E G++K L LDR
Sbjct: 732 ISVNAADLDTGFNGKLVY--VISAGNEDSSFIVDMEGGVLKILSPLDR------------ 777
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + D G PQ S + I + D NDN P F + Y
Sbjct: 778 -------------ELRDKYTLNITVYDLGIPQKSAWTLLDIKILDANDNPPEFLQDSY 822
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV TD+D NG + Y + F+I+ ETG + TL LD + ++ K
Sbjct: 2826 IQVKGTDLDSGLNG-QVTYSLXSFSELDIIESFTINMETGWITTLKELDHEKRDKYK--- 2881
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
I V+A D G QLS +++TV D+NDN P F
Sbjct: 2882 ----------------------IIVVASDRGEKIQLSSMAVVEVTVTDVNDNPPRF 2915
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+E GI++T LDR
Sbjct: 1049 MTVSAYDEDAGRDG-EIRYSIRDGSG-IGVFRIDEEKGIIETADHLDR------------ 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V D+NDN P
Sbjct: 1095 -------------ETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAP 1132
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D S+ + Y+I + FSI+ +TG+ IT
Sbjct: 1154 IQIEAFDPDS-SSSEKLSYKITSG-NPQGFFSINPKTGL-------------------IT 1192
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
T R LDR E++ E + V DNGTP S + + V D NDN+P F
Sbjct: 1193 TTSR--KLDR---EQQGEHILEVTVTDNGTPAKSTIARVIVKVLDENDNKPQF 1240
>gi|307200812|gb|EFN80865.1| Neural-cadherin [Harpegnathos saltator]
Length = 1176
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 904 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 953
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 954 -----------DDG---KFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 998
>gi|332029953|gb|EGI69778.1| Neural-cadherin [Acromyrmex echinatior]
Length = 1145
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 904 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 953
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 954 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 998
>gi|350418529|ref|XP_003491887.1| PREDICTED: neural-cadherin-like [Bombus impatiens]
Length = 3006
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 905 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 954
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 955 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 999
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K Y++DR D +R+ I + +Q +LDR++ R + + ++A D+G P
Sbjct: 1807 QGGKSKVFYSIDRSSDRKRQFSINENGTVSIQRSLDREETPRHQ---VKILAIDDGIPPK 1863
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1864 TATATLTVIVHDINDNPPRF 1883
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D D+P K EIY+ ++ LDRD P + TV A+D G L
Sbjct: 1476 GIDPDNPANSKFDINRTSGEIYV-----LKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGY 1530
Query: 97 CTMKITVEDINDNEPMFDRVQY 118
+++ ++DINDN P F + Y
Sbjct: 1531 ADVQVNLKDINDNAPTFPQGIY 1552
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72
N T+ YR++ PG A +T T Y R EK + DI+V + D
Sbjct: 1130 NNPTVFYRLM--PGSTA------QTNKFHTFYLQQR----AEKSV-TWADIKVN--HQLD 1174
Query: 73 PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1175 YESIKEYNLTIRVENNGAQQLASEATVYIVLEDVNDEIPLF 1215
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L + E++KE I ++ +D GTP +S T+ + + DINDN+
Sbjct: 1952 VSSLLSFNREQQKEYLIPIVIKDTGTPSMSGTSTLTVIIGDINDNK 1997
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D PS G +I+ +I+ F I+ ETG++KT
Sbjct: 1567 MTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESETGVIKTA----------- 1615
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1616 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1660
Query: 115 RVQY 118
+ ++
Sbjct: 1661 KEEW 1664
>gi|340722540|ref|XP_003399662.1| PREDICTED: neural-cadherin-like [Bombus terrestris]
Length = 3006
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 905 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 954
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 955 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 999
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K Y++DR D +R+ I + +Q +LDR++ R + + ++A D+G P
Sbjct: 1807 QGGKSKVFYSIDRSSDRKRQFSINENGTVSIQRSLDREETPRHQ---VKILAIDDGIPPK 1863
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1864 TATATLTVIVHDINDNPPRF 1883
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D D+P K EIY+ ++ LDRD P + TV A+D G L
Sbjct: 1476 GIDPDNPANSKFDINRTSGEIYV-----LKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGY 1530
Query: 97 CTMKITVEDINDNEPMFDRVQY 118
+++ ++DINDN P F + Y
Sbjct: 1531 ADVQVNLKDINDNAPTFPQGIY 1552
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72
N T+ YR++ PG A +T T Y R EK + DI+V + D
Sbjct: 1130 NNPTVFYRLM--PGSTA------QTNKFHTFYLQQR----AEKSV-TWADIKVN--HQLD 1174
Query: 73 PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1175 YESIKEYNLTIRVENNGAQQLASEATVYIVLEDVNDEIPLF 1215
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L + E++KE I ++ +D GTP +S T+ + + DINDN+
Sbjct: 1952 VSSLLSFNREQQKEYLIPIVIKDTGTPSMSGTSTLTVIIGDINDNK 1997
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D PS G +I+ +I+ F I+ ETG++KT
Sbjct: 1567 MTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESETGVIKTA----------- 1615
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1616 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1660
Query: 115 RVQY 118
+ ++
Sbjct: 1661 KEEW 1664
>gi|110764123|ref|XP_392099.3| PREDICTED: neural-cadherin [Apis mellifera]
Length = 3043
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 926 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 975
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 976 -----------DD---GKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRY 1020
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 45 ALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
+D D+P K EIY+ ++ LDRD P + TV A+D G L
Sbjct: 1501 GIDPDNPANSKFDINRTSGEIYV-----LKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGY 1555
Query: 97 CTMKITVEDINDNEPMF 113
+++ ++DINDN P F
Sbjct: 1556 ADVQVNLKDINDNAPTF 1572
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K Y++DR D +R+ I + +Q +LDR++ R + + ++A D+G P
Sbjct: 1832 QGGKSKVYYSIDRSSDRKRQFSINENGTVSIQRSLDREETPRHQ---VKILAIDDGIPPK 1888
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1889 TATATLTVIVHDINDNPPRF 1908
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72
N T+ YR++ PG A +T T Y R EK + DI+V + D
Sbjct: 1155 NNPTVFYRLM--PGSTA------QTNKFHTFYLQQR----AEKSV-TWADIKVN--HQLD 1199
Query: 73 PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1200 YESIKEYNLTIRVENNGAQQLASEATVYIVLEDVNDEIPLF 1240
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L + E++KE I ++ +D GTP +S T+ + + DINDN+
Sbjct: 1977 VSSLLSFNREQQKEYLIPIVIKDTGTPSMSGTSTLTVIIGDINDNK 2022
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D PS G +I+ +I+ F I+ +TG++KT
Sbjct: 1592 MTMTAVDYDDPSEGTNAKLIYSIEKNVIEEETGSPIFEIESDTGVIKTA----------- 1640
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1641 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1685
Query: 115 RVQY 118
+ ++
Sbjct: 1686 KEEW 1689
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFS+D +TG V + LD
Sbjct: 3221 LQVYAASRDIEANA-DITYSIISG-NEHGKFSLDSKTGAVFIIGNLDY------------ 3266
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3267 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNSPVFSQATY 3311
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D P N I Y II G R + F+ID G VK LDR
Sbjct: 3326 ITVMADDADGPLNS-HIHYSIID--GNRGSSFTIDPVRGEVKVTRLLDR----------- 3371
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P F R Y
Sbjct: 3372 --------------ETISGYTLTVQASDNGSPPKVNTTTVNIDVSDVNDNAPAFSRENY 3416
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y + + FSID TG+VK + LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-RVTYSFLT---DTDVFSIDSTTGVVKIVQPLDR---EVQPVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R D RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEAR-------DLAREE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + YR+ ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYRLDQSQSMEVVESFAINVETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKTDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G ++Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EVRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + + VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYVEVEDVNDNAP 1137
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I Y +I + +FSI++ +GI++ LDR E+
Sbjct: 3116 LHALATDADAGLNR-KISYSLIDS--ADGQFSINELSGIIQLEKPLDR-------ELQAV 3165
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R LS + T+ ++V DINDN P+F+ +Y
Sbjct: 3166 YTLSLKAVDQGLPRR-----------------LSASGTVVVSVLDINDNPPVFEYREY 3206
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N G I Y++ + F ID +G++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMFGNLSQSHDHFHIDSSSGLISLLRTLDY----------- 2350
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I V A D G P LS + + V D+NDN P+F++ Y
Sbjct: 2351 --------------EQSRQHTILVRAVDGGMPPLSSDVVVTVDVTDLNDNLPLFEQQIY 2395
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLVY--AISGGNEDSCFIIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVAVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 30/103 (29%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P + F+ID TG + T+ +LD + E
Sbjct: 1809 YHIVE-PSVHSYFAIDSSTGALHTVLSLDYE--------------------------ETS 1841
Query: 79 IY-ITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
I+ TV D GTP+L A + I V DIND P+F R Y
Sbjct: 1842 IFQFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFARPLY 1884
>gi|156399383|ref|XP_001638481.1| predicted protein [Nematostella vectensis]
gi|156225602|gb|EDO46418.1| predicted protein [Nematostella vectensis]
Length = 1888
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D +NG I Y I K PG + F+ID +TGIV TL + DR+ EK +Y
Sbjct: 1059 MQVHADDQDTGANGEVI-YSIEKPPGALSYFAIDDKTGIVTTLQSFDRE----EKPVY-- 1111
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ + RD + G +L C + I + D ND++P+F QY
Sbjct: 1112 ---QIRIIGRDGG----------LGSSRGAERLMGVCQVDIRIGDKNDHDPVFQNKQY 1156
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 28/119 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q A D D +N + Y II R+ FSI TG++ L LDR+D R
Sbjct: 348 QFAARDPDKGANA-RVTYSIINFEDSRSDNLFSIHPFTGVLTALSTLDREDLSRH----- 401
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A+D G P++S + I V+D+ND+ P F +
Sbjct: 402 --------------------ILTIQAKDTGVPRMSGLAQIVIIVDDVNDHAPRFSSGSF 440
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + Y ++ + KF +D+ TG+V T DR
Sbjct: 1386 LQVSARDRDSGENG-RVTYSFVQDK-DSDKFGLDENTGLVTTREEFDR------------ 1431
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A DNG+PQ + ++I + D NDN P+F+ Y
Sbjct: 1432 -------------EAQGRYTLALKARDNGSPQKTTDTIVEIIITDENDNPPIFEEKVY 1476
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 35 KETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLS 94
K V T+ A+D DDP+ +T ++ D E+ I V A D G P
Sbjct: 1644 KAGASVMTMSAVDIDDPDVGNNAVMTDTGVIRTRRMLDREKRSSYDIVVAATDGGDPPQE 1703
Query: 95 DACTMKITVEDINDNEPMFDR 115
+K+ V+D ND P F +
Sbjct: 1704 GKVKVKVIVDDANDQHPQFTK 1724
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D SN + Y I + F+ID+ TG V T
Sbjct: 1171 LHVSATDADAGSNA-KLTYSIQP---QNDYFAIDRATGTV-------------------T 1207
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + + + + + + I V+A DNG ++ITV D+ ++ P+F + Y
Sbjct: 1208 SKMSLLSEAKSEGQSSRVISFNVVANDNGNVSRKTVTLVRITVLDLGNDPPVFSQGVY 1265
>gi|321459270|gb|EFX70325.1| hypothetical protein DAPPUDRAFT_300527 [Daphnia pulex]
Length = 2952
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG + T DR+
Sbjct: 827 VRVQATDADKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEIFTNKVFDREG--------- 876
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 877 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 921
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 34 DKETGIVKTL--YALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITV 83
D+E IV L +D D+P K EIY+ ++ LDRD P + TV
Sbjct: 1384 DREQNIVYFLTGQGIDPDNPANSKFDINRTTGEIYV-----LKPLDRDQPNGRPQWRFTV 1438
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A+D L +++ ++DINDN P+F Y
Sbjct: 1439 FAQDEKGEGLVGYADVQVNLKDINDNAPLFPHGVY 1473
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDR-DDPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K +A+DR D R+ I + +Q LDR+D R + + ++A D+G P
Sbjct: 1728 QGGKSKVSFAIDRASDRRRQFAINQNGTVTIQRHLDREDTPRHQ---VKILAIDDGVPPK 1784
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V+DINDN P F
Sbjct: 1785 TATATLTVIVQDINDNAPRF 1804
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
V +L D E++KE ++ ++ +D+G P +S T+ + + D+NDN+
Sbjct: 1873 VSSLRSFDREQQKEFHVPIVIKDSGNPAMSGTSTLTVIIGDVNDNK 1918
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPE 74
T+ YR+I+ G A +T T Y R D + DI+V LD E
Sbjct: 1054 TVFYRLIR--GSTA------QTNKYDTFYLQQRAD-----NGHTWADIKVNHPLDY---E 1097
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND+ P+F
Sbjct: 1098 NIKEYNLTIRVENNGVQQLASEATVYIVLEDVNDDIPLF 1136
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 50/124 (40%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I F I+ ETG++KT
Sbjct: 1488 MTMTAVDYDDPNEGSNAKLTYSIEKNVIDENTGMPIFEIESETGVIKTA----------- 1536
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR E+ + I V+A D G L T I V+DIND P F
Sbjct: 1537 ----------VPGLDR---EKTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1581
Query: 115 RVQY 118
+ ++
Sbjct: 1582 KSEW 1585
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+HA D +N I Y I+ E KFSID TG I+I
Sbjct: 3251 LQIHAASRDIEANA-EITYSIVSG-NEHGKFSIDSATG-----------------AIFI- 3290
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D D E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3291 -------IDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTY 3341
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG ++Y ++ + KF+I+ TG+VK + LD + E+ +Y
Sbjct: 843 IQIEATDKDLGANG-EVKYSLLT---DTDKFAINAVTGVVKVVGLLDHE----EQPVYF- 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD P E +++ TVI +K+++ED+NDN P F
Sbjct: 894 --LKIEA--RDQPTEEPQLFSTVI--------------LKVSIEDVNDNPPKF 928
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +N G I Y +I+ E + F ID TG++ T LD + ++ K
Sbjct: 2304 LQVSATDADSGTNRG-ISYHLIEDDTESHEYFHIDSSTGLILTTRTLDYEKIQQHK---- 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G LS + + V D+NDN P+F+++ Y
Sbjct: 2359 ---------------------LLIRAIDGGMLPLSSDTVITVDVTDLNDNPPLFNQLVY 2396
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y I + F+ID G +K LDR
Sbjct: 3356 ITVMADDADGPSNN-HIHYTITDG-NQGNPFTIDPSRGEIKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A DNG P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------EKISGYTLTVQASDNGNPPRRNTTTVNIDVSDVNDNPPVFSKGNY 3446
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSID+ +GI++ +LDR+
Sbjct: 3147 RVQATDADAGMNR-KIHYSLVNS--AEGQFSIDEFSGIIRLEKSLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+QA+ +T+ A D G P+ LS ++ ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQAV----------YTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEYREY 3236
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y+I++ P R F+ID TG ++TL +LD Y
Sbjct: 1793 LVIRAMDADKESNA-LLVYQIVE-PSVRKYFAIDSSTGAIRTLMSLD----------YEE 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
T+I + +V D G P+L A + I V DIND P+F R Y
Sbjct: 1841 TNI---------------FHFSVQVHDMGIPRLYAEYAANVTIYVVDINDCPPVFSRELY 1885
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
+QV TD+D NG + Y + P + F+I+ ETG + TL LD + ++ K
Sbjct: 2830 IQVKGTDLDSGLNG-QVTYSL--DPSQELDVIESFAINMETGWITTLKELDHEMRDKYK- 2885
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ITVIA D G QLS +++TV D+NDN P F
Sbjct: 2886 ------------------------ITVIASDRGEKIQLSSLAVVEVTVTDVNDNPPRF 2919
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF + +TG +KTL LDR+
Sbjct: 3044 MQVSATDADIRSNA-EITYTL-HGPGAE-KFRLTPDTGELKTLMPLDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +Y ++ +G + A + +T+ED+NDN P+F
Sbjct: 3090 ---------------QQAVYYLLMKATDGGGRFCQA-NIILTLEDVNDNAPVF 3126
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + +I E + F +D E+G++K L LDR
Sbjct: 740 LNATDLDTGFNGKLVY--VISGGNEDSSFIVDMESGMLKILSPLDR-------------- 783
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + V D G PQ S + I + D NDN P F + Y
Sbjct: 784 -----------EVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSY 828
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+E GI++T LDR
Sbjct: 1055 MTVSAYDEDEGRDG-EIRYSIRDGSG-MGVFRIDEEKGIIETADHLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V D+NDN P
Sbjct: 1101 -------------ETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAP 1138
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+HA D +N I Y I+ E KFSID TG I+I
Sbjct: 3251 LQIHAASRDIEANA-EITYSIVSG-NEHGKFSIDSTTG-----------------AIFI- 3290
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D D E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3291 -------IDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTY 3341
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG ++Y ++ + KF+I+ TG+VK + LD + E+ IY
Sbjct: 843 IQIEATDKDLGANG-EVKYSLLT---DTDKFAINAVTGVVKVVGLLDHE----EQHIYF- 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD P E +++ TVI +K+++ED+NDN P F
Sbjct: 894 --LKIEA--RDQPTEEPQLFSTVI--------------LKVSIEDVNDNPPKF 928
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P R F+ID TG ++TL +LD Y
Sbjct: 1793 LVIQATDADKESNA-LLVYQIVE-PSVRKYFAIDSSTGAIRTLMSLD----------YEE 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
T+I + +V D G P+L A + I V DIND P+F R Y
Sbjct: 1841 TNI---------------FHFSVQVHDMGIPRLYAEYAANVTIYVVDINDCPPVFSRELY 1885
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y I + F+ID G +K LDR
Sbjct: 3356 ITVMADDADGPSNN-HIHYTITDG-NQGNPFTIDPSRGEIKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------EKISGYTLTVQASDNGSPPRRNTTTVNIDVSDVNDNPPVFSKGNY 3446
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
+QV TD+D NG + Y + P + F+I+ ETG + TL LD + ++ K
Sbjct: 2830 IQVKGTDLDSGLNG-QVTYSL--DPSQELDIIESFAINMETGWITTLKELDHEMRDKYK- 2885
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ITV+A D G QLS +++TV D+NDN P F
Sbjct: 2886 ------------------------ITVVAADRGEKIQLSSLAVVEVTVTDVNDNPPRF 2919
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSID+ +GI++ LDR+
Sbjct: 3147 RVQATDADAGMNR-KIHYSLVNS--AEGQFSIDEFSGIIRLEKPLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+QA+ +T+ A D G P+ LS + ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQAV----------YTLTLRATDEGLPRRLSSTSNLIVSVLDINDNPPVFEYREY 3236
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 48/115 (41%), Gaps = 34/115 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF + +TG +KTL LDR
Sbjct: 3044 MQVSATDADIRSNA-EITYTL-HGPGAE-KFRLTADTGELKTLMPLDR------------ 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI--TVEDINDNEPMF 113
E++ Y+ V A D G C I T+ED+NDN P F
Sbjct: 3089 -------------EQQAVYYLLVKATDGG----GRFCQANIILTLEDVNDNAPEF 3126
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +N G I Y +++ E F ID TG++ T ALD + ++ K
Sbjct: 2304 VQVSATDADSGTNRG-ISYHLVEDDTESHDYFHIDSSTGLILTTRALDYEKIQQHK---- 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G LS + + V D+NDN P+F+++ Y
Sbjct: 2359 ---------------------LLIRAVDGGMLPLSSDTVVTVDVTDLNDNPPLFNQLVY 2396
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + +I E + F +D E+G++K L LDR
Sbjct: 740 MNATDLDTGFNGKLVY--VISGGNEDSSFIVDMESGMLKILSPLDR-------------- 783
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + V D G PQ S + I + D NDN P F + Y
Sbjct: 784 -----------EVKDKYNLNVTVYDLGIPQKSAWHLLDIRILDANDNPPEFLQDSY 828
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+E GI++T LDR
Sbjct: 1055 MTVSAYDEDEGRDG-EIRYSIRDGSG-MGVFRIDEEKGIIETADHLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V D+NDN P
Sbjct: 1101 -------------ETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAP 1138
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + +LD
Sbjct: 3252 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIESLDY------------ 3297
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3298 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 3342
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G VK LDR
Sbjct: 3357 ITIMADDADGPSNS-HIHYSIIEG-NQGSPFTIDPVRGEVKVTKPLDR------------ 3402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3403 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3447
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + KFSID TG+VK + LDR E+
Sbjct: 843 IQVEATDKDLGPS--GHVTYAILT---DTEKFSIDSMTGVVKIIQPLDR-------EVQP 890
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++ TV+ +K++++D+NDN P F
Sbjct: 891 VHYLKIEA--RDQATEEPRLFSTVL--------------LKVSLDDVNDNPPRF 928
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++T+ +LD
Sbjct: 1794 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDY------------ 1839
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + TV D GTP+L +TV DIND P+F + Y
Sbjct: 1840 -------------EETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLY 1886
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++I G +K F ID TG++ + ALD + ++ +
Sbjct: 2305 LQVRATDSDSEPNRG-ISYQLI---GNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHR- 2359
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2360 ------------------------IFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQ 2395
Query: 117 QY 118
Y
Sbjct: 2396 VY 2397
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+
Sbjct: 3045 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLALLDRE----------- 3090
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3091 ---------------EQAVYNLLVKATDGGGRSCQAAIV-LTLEDVNDNAPEF 3127
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-IGVFRIDEETGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1138
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D NG + I + + F+ID ETG++K L LDR
Sbjct: 738 LFMNATDLDSGFNGKLVY--AISGGNDDSCFTIDMETGVLKVLSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +D+ + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -----EVMDK--------YTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++++ +FSI++ +GI++ LDR E+
Sbjct: 3148 RVQATDADTGLNR-KISYSLVES--ADGQFSINERSGIIQLEKHLDR-------ELQAVY 3197
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3198 TLTLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3237
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2831 IQIRASDLDSGANG-QVMYSLDQSQDADIIESFAINMETGWITTLKELDH---------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2880 ---------------EERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRF 2920
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + +LD
Sbjct: 3254 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIESLDY------------ 3299
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3300 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 3344
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G VK LDR
Sbjct: 3359 ITIMADDADGPSNS-HIHYSIIEG-NQGSPFTIDPVRGEVKVTKPLDR------------ 3404
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3405 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3449
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + KFSID TG+VK + LDR E+
Sbjct: 843 IQVEATDKDLGPS--GHVTYAILT---DTEKFSIDSMTGVVKIIQPLDR-------EVQP 890
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++ TV+ +K++++D+NDN P F
Sbjct: 891 VHYLKIEA--RDQATEEPRLFSTVL--------------LKVSLDDVNDNPPRF 928
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++T+ +LD
Sbjct: 1796 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDY------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + TV D GTP+L +TV DIND P+F + Y
Sbjct: 1842 -------------EETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLY 1888
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++I G +K F ID TG++ + ALD + ++ +
Sbjct: 2307 LQVRATDSDSEPNRG-ISYQLI---GNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHR- 2361
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2362 ------------------------IFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQ 2397
Query: 117 QY 118
Y
Sbjct: 2398 VY 2399
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+
Sbjct: 3047 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLALLDRE----------- 3092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3093 ---------------EQAVYNLLVKATDGGGRSCQAAIV-LTLEDVNDNAPEF 3129
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D NG + I + + F+ID ETG++K L LDR
Sbjct: 738 LFMNATDLDSGFNGKLVY--AISGGNDDSCFTIDMETGVLKVLSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +D+ + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -----EVMDK--------YTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++++ +FSI++ +GI++ LDR E+
Sbjct: 3150 RVQATDADTGLNR-KISYSLVES--ADGQFSINERSGIIQLEKHLDR-------ELQAVY 3199
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3200 TLTLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3239
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2833 IQIRASDLDSGANG-QVMYSLDQSQDADIIESFAINMETGWITTLKELDH---------- 2881
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2882 ---------------EERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRF 2922
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
++ DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1094 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1140
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + +LD
Sbjct: 3252 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIESLDY------------ 3297
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3298 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 3342
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G VK LDR
Sbjct: 3357 ITIMADDADGPSNS-HIHYSIIEG-NQGSPFTIDPVRGEVKVTKPLDR------------ 3402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3403 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3447
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + KFSID TG+VK + LDR E+
Sbjct: 843 IQVEATDKDLGPS--GHVTYAILT---DTEKFSIDSMTGVVKIIQPLDR-------EVQP 890
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++ TV+ +K++++D+NDN P F
Sbjct: 891 VHYLKIEA--RDQATEEPRLFSTVL--------------LKVSLDDVNDNPPRF 928
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++T+ +LD
Sbjct: 1794 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDPTTGAIRTVLSLDY------------ 1839
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + TV D GTP+L +TV DIND P+F + Y
Sbjct: 1840 -------------EETHAFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLY 1886
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++I G +K F ID TG++ + ALD + ++ +
Sbjct: 2305 LQVRATDSDSEPNRG-ISYQLI---GNHSKSHDHFHIDSNTGLISLVRALDYEQSQQHR- 2359
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2360 ------------------------IFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQ 2395
Query: 117 QY 118
Y
Sbjct: 2396 VY 2397
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-IGVFRIDEETGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1138
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+
Sbjct: 3045 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLALLDRE----------- 3090
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3091 ---------------EQAVYNLLVKATDGGGRSCQAAIV-LTLEDVNDNAPEF 3127
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D NG + I + + F+ID ETG++K L LDR
Sbjct: 738 LFMNATDLDSGFNGKLVY--AISGGNDDSCFTIDMETGVLKVLSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +D+ + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -----EVMDK--------YTLNITVYDLGIPQKAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++++ +FSI++ +GI++ LDR E+
Sbjct: 3148 RVQATDADTGLNR-KISYSLVES--ADGQFSINERSGIIQLEKHLDR-------ELQAVY 3197
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3198 TLTLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3237
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2831 IQIRASDLDSGANG-QVMYSLDQSQDADIIESFAINMETGWITTLKELDH---------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2880 ---------------EERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRF 2920
>gi|194880377|ref|XP_001974423.1| GG21728 [Drosophila erecta]
gi|190657610|gb|EDV54823.1| GG21728 [Drosophila erecta]
Length = 1514
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1270 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1313
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1314 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1352
>gi|303228011|gb|ADM07129.1| LD09349p [Drosophila melanogaster]
Length = 1271
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3251 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIETLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3297 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 3341
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK +Y LDR E ++ Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSMTGVVKIVYPLDR---EVQQVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLLSTVLLKVSLEDVNDNPPKF 927
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y II + + F+ID G VK LDR
Sbjct: 3356 ITVMADDTDGPSNS-RIRYSIIDG-NQGSPFTIDPAKGEVKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNY 3446
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + ALD + ++ K
Sbjct: 2303 IQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRALDYEQFQQHK----- 2357
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FD+ Y
Sbjct: 2358 --------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY 2395
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KTL LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTLAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+E+Y ++ +G + +A + +TVED+NDN P F
Sbjct: 3089 ---------------EQEVYNLLVKATDGGGRFCEA-NIVLTVEDVNDNAPEF 3125
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1884
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD + +R +
Sbjct: 2829 IQIRASDLDSGTNG-QVMYSLDQSQSVEVIESFAINMETGWISTLKELDHEKRDRYQ--- 2884
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2885 ----------------------IQVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1054 MTVSARDEDTGRDG-EIRYSIRDGSG-VGVFKIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D I Y +I + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGXLNRKISYSLINS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3196
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3197 TLTLKAVDQGLPRR-----------------LTATGTLVVSVLDINDNPPVFEYREY 3236
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 739 LNATDLDTGFNGKLV--YAISGGNEDSCFIIDMETGMLKILSPLDRETTDKYTLNITVSD 796
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 797 LGIPQKAAWRLIDIRVLDANDNPPEFLQESYFVEVSED 834
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVI 1232
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1233 VKILDENDNKPQF 1245
>gi|195065835|ref|XP_001996748.1| GH25256 [Drosophila grimshawi]
gi|193891968|gb|EDV90834.1| GH25256 [Drosophila grimshawi]
Length = 1243
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1021 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1070
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1071 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1115
>gi|24584879|ref|NP_724074.1| Cadherin-N, isoform G [Drosophila melanogaster]
gi|22946728|gb|AAN10997.1| Cadherin-N, isoform G [Drosophila melanogaster]
Length = 3096
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|78706946|ref|NP_001027278.1| Cadherin-N, isoform K [Drosophila melanogaster]
gi|72151393|gb|AAZ66475.1| Cadherin-N, isoform K [Drosophila melanogaster]
Length = 3100
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1885 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1941
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1942 AIDDGSPPKTATATLTVIVQDINDNAPKF 1970
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1563 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1622
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1623 NLKDINDNAPIFPQGVY 1639
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1221 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1264
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1265 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1303
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2039 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2084
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1654 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1702
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1703 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1747
Query: 115 RVQY 118
+ ++
Sbjct: 1748 KDEW 1751
>gi|24584875|ref|NP_724072.1| Cadherin-N, isoform C [Drosophila melanogaster]
gi|22946726|gb|AAN10995.1| Cadherin-N, isoform C [Drosophila melanogaster]
Length = 3095
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1558 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1617
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1618 NLKDINDNAPIFPQGVY 1634
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1880 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1936
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1937 AIDDGSPPKTATATLTVIVQDINDNAPKF 1965
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2034 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2079
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1649 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1697
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1698 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1742
Query: 115 RVQY 118
+ ++
Sbjct: 1743 KDEW 1746
>gi|195344744|ref|XP_002038939.1| GM17111 [Drosophila sechellia]
gi|194134069|gb|EDW55585.1| GM17111 [Drosophila sechellia]
Length = 3151
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1935 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1991
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1992 AIDDGSPPKTATATLTVIVQDINDNAPKF 2020
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1613 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1672
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1673 NLKDINDNAPIFPQGVY 1689
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2089 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2134
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1704 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1752
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1753 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1797
Query: 115 RVQY 118
+ ++
Sbjct: 1798 KDEW 1801
>gi|198475483|ref|XP_002132931.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
gi|198138844|gb|EDY70333.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
Length = 3116
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1008 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1057
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1058 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1102
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1900 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1956
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1957 AIDDGSPPKTATATLTVIVQDINDNAPKF 1985
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1578 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1637
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1638 NLKDINDNAPIFPQGVY 1654
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1236 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1279
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1280 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1318
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2054 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2099
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1669 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1717
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1718 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1762
Query: 115 RVQY 118
+ ++
Sbjct: 1763 KDEW 1766
>gi|78706948|ref|NP_001027279.1| Cadherin-N, isoform J [Drosophila melanogaster]
gi|72151391|gb|AAZ66473.1| Cadherin-N, isoform J [Drosophila melanogaster]
Length = 3099
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1562 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1621
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1622 NLKDINDNAPIFPQGVY 1638
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1884 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1940
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1941 AIDDGSPPKTATATLTVIVQDINDNAPKF 1969
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1221 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1264
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1265 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1303
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2038 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2083
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1653 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1701
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1702 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1746
Query: 115 RVQY 118
+ ++
Sbjct: 1747 KDEW 1750
>gi|195117884|ref|XP_002003475.1| GI22312 [Drosophila mojavensis]
gi|193914050|gb|EDW12917.1| GI22312 [Drosophila mojavensis]
Length = 3328
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1028 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1077
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1078 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1122
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 2026 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 2082
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 2083 AIDDGSPPKTATATLTVIVQDINDNAPKF 2111
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1704 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1763
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1764 NLKDINDNAPIFPQGVY 1780
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1309 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1352
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1353 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1391
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2180 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2225
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1795 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1843
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1844 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1888
Query: 115 RVQY 118
+ ++
Sbjct: 1889 KDEW 1892
>gi|24584869|ref|NP_724069.1| Cadherin-N, isoform B [Drosophila melanogaster]
gi|22946724|gb|AAN10993.1| Cadherin-N, isoform B [Drosophila melanogaster]
Length = 3096
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1880 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1936
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1937 AIDDGSPPKTATATLTVIVQDINDNAPKF 1965
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1558 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1617
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1618 NLKDINDNAPIFPQGVY 1634
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2034 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2079
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1649 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1697
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1698 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1742
Query: 115 RVQY 118
+ ++
Sbjct: 1743 KDEW 1746
>gi|195159812|ref|XP_002020772.1| GL15835 [Drosophila persimilis]
gi|194117722|gb|EDW39765.1| GL15835 [Drosophila persimilis]
Length = 3110
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1008 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1057
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1058 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1102
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1985 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 2041
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 2042 AIDDGSPPKTATATLTVIVQDINDNAPKF 2070
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1289 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1332
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1333 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1371
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2139 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2184
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1754 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1802
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1803 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1847
Query: 115 RVQY 118
+ ++
Sbjct: 1848 KDEW 1851
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 23/115 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG ++ I+I
Sbjct: 3244 LQVYAASRDIEANAD-ITYSIISG-NEHGKFSIDSKTGNLR-------------GSIFI- 3287
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+++LD E E Y+TV A D GTP LSD T+ I V DINDN P+F +
Sbjct: 3288 ----IESLDY---ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQ 3335
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + +FSID TG+VK LDR E+
Sbjct: 838 IQVEATDKDLGPNG-HVTYSILT---DTDRFSIDSVTGVVKIARPLDR-------EVQHV 886
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD + E +++ TV+ +K+++ED+NDN PMF
Sbjct: 887 HYLKIEA--RDQAKEEPQLFSTVL--------------LKVSLEDVNDNPPMF 923
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F ID TG++ + LD + ++ +
Sbjct: 2297 IQVRATDSDSEPNRG-ISYQMF---GNHSKSQDYFHIDSSTGLISLVRTLDYEQFQQHR- 2351
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I+V A D G P LS + + V D+NDN P+FD+
Sbjct: 2352 ------------------------ISVRAVDGGMPPLSSDVIITVDVTDLNDNPPLFDQQ 2387
Query: 117 QY 118
Y
Sbjct: 2388 IY 2389
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D DP +G I+Y I G F ID+ETG+++T
Sbjct: 1050 MTVSAHDEDPGRDG-EIRYSIRDGSG-VGVFRIDEETGVIETS----------------- 1090
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1091 --------DRLDRESTPHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAP 1133
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y I + + F+ID G VK LDR
Sbjct: 3351 ITVMADDADGPSNS-HIHYSITDG-NQGSPFTIDPVKGEVKVTKLLDR------------ 3396
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F + Y
Sbjct: 3397 -------------ETISGYTLTVQASDNGNPPRVNTTTVNIDVSDVNDNAPVFSQGNY 3441
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG +KTL LDR+
Sbjct: 3037 MQVSATDADIRSNA-EITYTLYGSGAE--KFKLNPDTGELKTLAPLDRE----------- 3082
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY V+ +G + A + +T+ED+NDN P F
Sbjct: 3083 ---------------EQAIYNLVVKATDGGGRFCQA-NIVLTLEDVNDNAPEF 3119
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P R F+ID TG V+ + LD
Sbjct: 1786 LVIRATDADKESNA-LLVYHIVE-PSGRKYFAIDPSTGAVRAVLRLDY------------ 1831
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D G P+L A + I V DIND P+F R Y
Sbjct: 1832 -------------EETSTFHFTVQVHDMGVPRLFAEYAANVTIHVIDINDCPPVFSRSLY 1878
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 735 MNATDLDTGFNGKLVYS--ISGGNEDSCFVIDMETGMLKILSPLDRETTDKYTLNVTVYD 792
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 793 LGVPQKAAWHLLDIRVLDANDNAPEFLQESYFVEVSED 830
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2823 IQIRASDLDSGTNG-QVMYSLDQSQSVDVIESFAINMETGWITTLKELDH---------- 2871
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2872 ---------------EKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2912
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1169 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPRSTIARVI 1228
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1229 VKILDENDNKPQF 1241
>gi|24584871|ref|NP_724070.1| Cadherin-N, isoform F [Drosophila melanogaster]
gi|22946725|gb|AAN10994.1| Cadherin-N, isoform F [Drosophila melanogaster]
Length = 3096
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|195579808|ref|XP_002079751.1| GD21853 [Drosophila simulans]
gi|194191760|gb|EDX05336.1| GD21853 [Drosophila simulans]
Length = 1402
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 968 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1017
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1018 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1062
>gi|24584867|ref|NP_724068.1| Cadherin-N, isoform H [Drosophila melanogaster]
gi|22946723|gb|AAN10992.1| Cadherin-N, isoform H [Drosophila melanogaster]
Length = 3095
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1880 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1936
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1937 AIDDGSPPKTATATLTVIVQDINDNAPKF 1965
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1558 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1617
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1618 NLKDINDNAPIFPQGVY 1634
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2034 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2079
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1649 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1697
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1698 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1742
Query: 115 RVQY 118
+ ++
Sbjct: 1743 KDEW 1746
>gi|195483811|ref|XP_002090443.1| GE13118 [Drosophila yakuba]
gi|194176544|gb|EDW90155.1| GE13118 [Drosophila yakuba]
Length = 3281
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1988 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 2044
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 2045 AIDDGSPPKTATATLTVIVQDINDNAPKF 2073
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1666 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1725
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1726 NLKDINDNAPIFPQGVY 1742
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1270 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1313
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1314 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1352
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2142 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2187
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1757 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1805
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1806 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1850
Query: 115 RVQY 118
+ ++
Sbjct: 1851 KDEW 1854
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 1174 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 1219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 1220 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 1264
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 227 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 274
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 275 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 317
Query: 117 QY 118
Y
Sbjct: 318 IY 319
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 753 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 801
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 802 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 842
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 967 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 1012
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 1013 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 1049
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 1070 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 1119
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 1120 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 1159
>gi|195388064|ref|XP_002052710.1| GJ20220 [Drosophila virilis]
gi|194149167|gb|EDW64865.1| GJ20220 [Drosophila virilis]
Length = 3328
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1021 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1070
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1071 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1115
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 2019 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 2075
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 2076 AIDDGSPPKTATATLTVIVQDINDNAPKF 2104
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1697 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1756
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1757 NLKDINDNAPIFPQGVY 1773
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1302 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1345
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1346 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1384
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2173 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2218
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1788 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1836
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1837 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1881
Query: 115 RVQY 118
+ ++
Sbjct: 1882 KDEW 1885
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3247 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3292
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3293 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTY 3337
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+VK LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVKIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVILKVSLEDVNDNPPKF 927
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3352 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPIRGEVKVTKLLDR------------ 3397
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3398 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3442
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F +D TG++ L LD
Sbjct: 2300 VQVRATDSDSEPNRGISYHMFGNLSKSHDHFHVDSNTGLISLLRTLDY------------ 2347
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I V A D G P LS + + V D+NDN P+F++ Y
Sbjct: 2348 -------------EQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY 2392
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1789 LVIRATDADKDSNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1841 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1881
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3143 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3192
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3193 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3232
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLVY--AISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFRIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I V D+NDN P
Sbjct: 1095 --------DRLDHESTSHYWLTVFATDQGVVPLSSFMEIYIEVGDVNDNAP 1137
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG ++T LDR+
Sbjct: 3040 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELRTSTPLDRE----------- 3085
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+ND+ P F
Sbjct: 3086 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDSAPEF 3122
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +N + Y + ++ F+I+ ETG + TL LD
Sbjct: 2826 IQIRASDADSGTNS-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2874
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G LS + +TV D+ND+ P F
Sbjct: 2875 ---------------EKRDNYQIKVVASDHGEKIHLSSTAIVDVTVTDVNDSPPRF 2915
>gi|24584877|ref|NP_724073.1| Cadherin-N, isoform A [Drosophila melanogaster]
gi|22946727|gb|AAN10996.1| Cadherin-N, isoform A [Drosophila melanogaster]
Length = 3096
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1880 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1936
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1937 AIDDGSPPKTATATLTVIVQDINDNAPKF 1965
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1558 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1617
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1618 NLKDINDNAPIFPQGVY 1634
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2034 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2079
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1649 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1697
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1698 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1742
Query: 115 RVQY 118
+ ++
Sbjct: 1743 KDEW 1746
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTY 3340
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+VK LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDAFSIDSVTGVVKITRPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVILKVSLEDVNDNPPKF 927
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y I+ + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIVDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNY 3445
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNLSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRATDADKDSNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIHYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEMIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG ++T LDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELRTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ ++
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRETADKYT------- 789
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V D G PQ + + + V D NDN P F + Y
Sbjct: 790 ------------------LNVTVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVI 1232
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1233 VKILDENDNKPQF 1245
>gi|194758880|ref|XP_001961686.1| GF15089 [Drosophila ananassae]
gi|190615383|gb|EDV30907.1| GF15089 [Drosophila ananassae]
Length = 3097
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|78706950|ref|NP_001027280.1| Cadherin-N, isoform I [Drosophila melanogaster]
gi|72151392|gb|AAZ66474.1| Cadherin-N, isoform I [Drosophila melanogaster]
Length = 3100
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1884 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1940
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1941 AIDDGSPPKTATATLTVIVQDINDNAPKF 1969
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1562 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1621
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1622 NLKDINDNAPIFPQGVY 1638
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1221 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1264
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1265 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1303
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2038 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2083
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1653 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1701
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1702 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1746
Query: 115 RVQY 118
+ ++
Sbjct: 1747 KDEW 1750
>gi|24584873|ref|NP_724071.1| Cadherin-N, isoform D [Drosophila melanogaster]
gi|13124002|sp|O15943.2|CADN_DROME RecName: Full=Neural-cadherin; AltName: Full=Cadherin-N;
Short=dN-cadherin; Flags: Precursor
gi|7298411|gb|AAF53635.1| Cadherin-N, isoform D [Drosophila melanogaster]
Length = 3097
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|2381492|dbj|BAA22151.1| DN-cadherin [Drosophila melanogaster]
Length = 3097
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|78706944|ref|NP_001027277.1| Cadherin-N, isoform L [Drosophila melanogaster]
gi|72151394|gb|AAZ66476.1| Cadherin-N, isoform L [Drosophila melanogaster]
Length = 3101
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1885 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1941
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1942 AIDDGSPPKTATATLTVIVQDINDNAPKF 1970
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1563 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1622
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1623 NLKDINDNAPIFPQGVY 1639
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1221 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1264
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1265 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1303
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2039 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2084
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1654 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1702
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1703 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1747
Query: 115 RVQY 118
+ ++
Sbjct: 1748 KDEW 1751
>gi|24584881|ref|NP_724075.1| Cadherin-N, isoform E [Drosophila melanogaster]
gi|22946729|gb|AAN10998.1| Cadherin-N, isoform E [Drosophila melanogaster]
Length = 3097
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTY 3340
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F ID TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNLSKSQDHFHIDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
ER ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------ERSRQHTILVRAVDGGMPPLSSEVIVTVDVTDLNDNLPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y ++ + FSID G+VK L LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-RVTYSVLT---DTDMFSIDSTAGVVKILQPLDR---EVQPVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D P N I Y II G R + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPLNS-HIHYSIID--GNRGSSFTIDPVRGDVKVTKVLDR----------- 3400
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P F R Y
Sbjct: 3401 --------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSRGNY 3445
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + +A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCEA-SIVLTLEDVNDNAPEF 3125
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVAAQDEDAGRDG-EIRYSIRDGSG-VGVFRIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNATDLDTGFNGKLVY--AVSGGNEDSCFIIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVIDANDNPPEFLQESY 827
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 31/121 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P + F+ID T + T+ +LD +
Sbjct: 1792 LVIGAADADKDSNA-LLVYHIVE-PAMHSYFAIDSSTAAIHTVRSLDYE----------- 1838
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQ 117
E I+ TV D GTP+L A + I V DIND P+F R
Sbjct: 1839 ---------------ETSIFQFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFARPL 1883
Query: 118 Y 118
Y
Sbjct: 1884 Y 1884
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V LDR E + E +
Sbjct: 842 IQVEATDKDLGPNGH-VTYSILT---DTDTFSIDSVTGVVNIARPLDR---ELQHEHSLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3235
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3249 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIGGLDY------------ 3294
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3295 -------------ESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTY 3339
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ + KFSID TGIVK + +LDR+ + ++
Sbjct: 843 IQVEAIDRDLGTNG-EVRYSILT---DTDKFSIDSVTGIVKVIGSLDRE----AQSVHF- 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A RD + E QLS +K+++ED+NDN P F + Y
Sbjct: 894 --LKIEA--RDQAKEES--------------QLSSTVLLKVSLEDVNDNPPKFIPLNY 933
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D SNG + YR+ P + A F+I+ ETG + TL LD
Sbjct: 2830 IQIKATDQDSGSNG-QVTYRLY--PAQDADISESFAINAETGWITTLKELDH-------- 2878
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E++ + ITV+A D G QL+ ++++V D+NDN P F
Sbjct: 2879 -----------------EKQNKYKITVVASDRGEKVQLTSTAVVEVSVTDVNDNPPRF 2919
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P N I+Y II E +F+ID G VK LDR
Sbjct: 3354 VTVMAADSDGPLNS-HIRYSIIDGNQEN-QFTIDPTLGEVKVAKLLDR------------ 3399
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A DNG P + T+ I V D+NDN P+F + Y
Sbjct: 3400 -------------EKISGYTLTVQASDNGNPPGINTTTVNIDVSDVNDNPPVFSKGNY 3444
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +N G + + F ID TGI+ +LD
Sbjct: 2304 VRVWATDADSGTNRGISYHLVENNSNSHEYFHIDSSTGIILISRSLDY------------ 2351
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ + V A D+G P LS + + + D+NDN P+F+++ Y
Sbjct: 2352 -------------EQSRQHTLLVRAIDSGMPPLSSDVVVTVGITDLNDNPPVFNQLLY 2396
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y + A E FS+ +TG +KTL ALDR+
Sbjct: 3044 MQILATDADIRSNA-EITYTLQGAGAE--DFSLSPDTGELKTLAALDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+K +Y ++ +G + A + + +ED+NDN P F
Sbjct: 3090 ---------------QKSVYTFMVKASDGGGRFCQA-NIILNIEDVNDNIPEF 3126
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
+A DR +I+ + + LDR+ P EK I+I ++A+D+G C++ + +
Sbjct: 2536 FAQDRFYTNERGQIFTS-----EKLDRETPA-EKVIFIRLMAKDSGGKVA--FCSVNVIL 2587
Query: 104 EDINDNEPMFDRVQY 118
D+NDN P+F +Y
Sbjct: 2588 TDVNDNAPLFRATEY 2602
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++T+ +LD
Sbjct: 1793 LVIRATDADKDSNA-LLVYQIVE-PSVHKYFTIDSSTGAIRTVMSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E +V D GTP+L A + I V DIND P+F + Y
Sbjct: 1839 -------------EERNTFRFSVQVSDMGTPRLFAEYAANVTIRVIDINDCPPVFSKDLY 1885
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G ++Y I G F+ID+E G + T+ LDR
Sbjct: 1055 MTVSAFDEDTGRDG-EVRYSIRDGSG-VGIFTIDEEKGTITTVDLLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V D+NDN P
Sbjct: 1101 -------------ETTSHYWLTVYAADQGVVPLSSFVEIYIEVGDVNDNAP 1138
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I + F I ETG++K L LDR
Sbjct: 740 INATDLDTGFNGKLV--YAISGGNNDSSFVIGMETGMLKILSPLDR-------------- 783
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + D G PQ S + I V D NDN P F + Y
Sbjct: 784 -----------EVKDKYTLNFTVYDLGIPQKSAWRLLDIRVLDANDNHPEFLQDSY 828
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3253 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3298
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3299 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3343
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3358 ITVMADDADGPSNSH-IHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3403
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3404 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3448
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2306 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2353
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2354 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 2396
Query: 117 QY 118
Y
Sbjct: 2397 IY 2398
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V LDR E + E +
Sbjct: 842 IQVEATDKDLGPNGH-VTYSILT---DTDTFSIDSVTGVVNIARPLDR---ELQHEHSLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2832 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2880
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2881 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2921
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3046 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3091
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3092 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3128
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1795 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1846
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1847 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1887
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3149 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3198
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3199 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3238
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 1640 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 1685
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 1686 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 1730
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 1745 ITVMADDADGPSNSH-IHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 1790
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 1791 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 1835
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 693 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 740
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 741 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 783
Query: 117 QY 118
Y
Sbjct: 784 IY 785
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 1219 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 1267
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 1268 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 1308
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 1433 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 1478
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 1479 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 1515
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 182 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 233
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 234 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 274
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 1536 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 1585
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 1586 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 1625
>gi|195436718|ref|XP_002066304.1| GK18219 [Drosophila willistoni]
gi|194162389|gb|EDW77290.1| GK18219 [Drosophila willistoni]
Length = 3304
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 1004 IKVVATDDDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1053
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1054 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1098
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 2002 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 2058
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 2059 AIDDGSPPKTATATLTVIVQDINDNAPKF 2087
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1680 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1739
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1740 NLKDINDNAPIFPQGVY 1756
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1285 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1328
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1329 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1367
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2156 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2201
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1771 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1819
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1820 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1864
Query: 115 RVQY 118
+ ++
Sbjct: 1865 KDEW 1868
>gi|380012137|ref|XP_003690144.1| PREDICTED: neural-cadherin-like [Apis florea]
Length = 1097
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 925 IKVQATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGQVLTNKVFDREG--------- 974
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
DD K + +TV A D G P L C+ + + D+NDN P+FDR
Sbjct: 975 -----------DDG---KFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDR 1016
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTY 3340
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG ++Y I+ + KFSID TG+VK L LDR E ++ Y+
Sbjct: 842 IQVEATDKDLGPNG-HVRYSILT---DTDKFSIDSVTGVVKILNPLDR---EEQQVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K++++D+NDN P F
Sbjct: 895 VEARDQA-------REE-------------PQLLSTVILKVSLDDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYAIIDG-NQGSPFTIDPARGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G I Y I G F ID+ETG+++T
Sbjct: 1054 MKVSARDEDMGRDG-EIHYSIRDGSG-VGVFRIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAP 1137
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADRESNA-LLVYHIVE-PSVHKYFTIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLY 1884
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D SNG + Y + ++ F+++ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGSNG-QVMYNLDQSQSVDVIESFAVNMETGWITTLRELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + + F +D TG++ + LD
Sbjct: 2303 VQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDY------------ 2350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I+V A D G P LS + + V D+ND+ P+FD+ Y
Sbjct: 2351 -------------EQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLY 2395
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAAYHLLVKATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNR-KISYSLLNS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D P R L+ T+ I+V DINDN P+F+ +Y
Sbjct: 3196 TLTLKAVDHGLPRR-----------------LTATGTIVISVLDINDNPPVFEYREY 3235
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ ++ATD+D NG + + E + F +D ETG++K L LDR+ +R
Sbjct: 737 LVMNATDLDTGFNGKLVY--AVSGGNEDSCFIMDMETGMLKILSPLDRETTDRYTLNITV 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ + +IRV + + PE +E Y ++ED
Sbjct: 795 SDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSED 834
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNAPVFSQDTY 3340
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG ++Y I+ + KFSID TG+VK L LDR E ++ Y+
Sbjct: 842 IQVEATDKDLGPNG-HVRYSILT---DTDKFSIDSMTGVVKILNPLDR---EEQQVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K++++D+NDN P F
Sbjct: 895 VEARDQA-------REE-------------PQLLSTVILKVSLDDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYAIIDG-NQGSPFTIDPARGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G I Y I G F ID+ETG+++T
Sbjct: 1054 MKVSARDEDMGRDG-EIHYSIRDGSG-VGVFRIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAP 1137
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADRESNA-LLVYHIVE-PSVHKYFTIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLY 1884
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D SNG + Y + ++ F+++ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGSNG-QVMYNLDQSQSVDVIESFAVNMETGWITTLRELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + + F +D TG++ + LD
Sbjct: 2303 VQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDY------------ 2350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I+V A D G P LS + + V D+ND+ P+FD+ Y
Sbjct: 2351 -------------EQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLY 2395
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAAYHLLVKATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNR-KISYSLLNS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D P R L+ T+ I+V DINDN P+F+ +Y
Sbjct: 3196 TLTLKAVDHGLPRR-----------------LTATGTIVISVLDINDNPPVFEYREY 3235
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ ++ATD+D NG + + E + F +D ETG++K L LDR+ +R
Sbjct: 737 LVMNATDLDTGFNGKLVY--AVSGGNEDSCFIMDMETGMLKILSPLDRETTDRYTLNITV 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ + +IRV + + PE +E Y ++ED
Sbjct: 795 SDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSED 834
>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
Length = 3342
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D +NG I Y + + A F+ID TGIV T +LD
Sbjct: 2204 QVSATDADEGTNGA-IYYEVTSGNTDNA-FAIDHVTGIVTTAKSLDY------------- 2248
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E +TV+A D G+PQL+ TM+I + D+NDN+P+F
Sbjct: 2249 ------------EIEDSYVLTVVARDGGSPQLTGTATMRIGIVDVNDNQPVF 2288
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QVHATD D N I YRI + + F I+ +G+V TL +DR
Sbjct: 526 QVHATDADEGVNAQII-YRISPEGTDYSDWFEINPMSGLVTTLQKVDR------------ 572
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +++TVIA D G LS + + IT+ D+NDN+P+F
Sbjct: 573 -------------EETGSVFLTVIASDEGEISLSSSVIINITITDVNDNQPVF 612
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG I Y I + A FSI++ TG + T+ ALDR+D
Sbjct: 1784 ATDADEGPNGDLI-YSITGGDPKNA-FSINQSTGAIFTVGALDRED-------------- 1827
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ A D GT S T+++TV D+NDN+P+F + Y
Sbjct: 1828 -----------EATYTLTITATDQGTSPRSGTTTIRVTVTDLNDNDPVFGSMSY 1870
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D I Y I++ ++ KF ID G + L LDR+
Sbjct: 2512 ITVVAEDMDLSPENSKINY-FIESGNDQGKFKIDANDGSITVLERLDRE----------- 2559
Query: 61 TDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ Y +I A DNG P + + I VEDIND+ P+FD VQY
Sbjct: 2560 ---------------ATDTYTLIIGAVDNGEPVNNATAEVVIEVEDINDHSPIFDHVQY 2603
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E + +T++A D+G+P + + T+++TV D NDN P F + Y
Sbjct: 1092 QVLDR---ELKSTFTLTIMASDSGSPPQNSSATVQVTVVDANDNAPHFTKKSY 1141
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + Y I E KFS+D TG++ ++LD
Sbjct: 1571 IHIIATDEDSGENG-RVGYTITSG-NEDGKFSLDAVTGLLTIAHSLDH------------ 1616
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +++ + ++A D+GT Q T+ I V D+ND P F++ Y
Sbjct: 1617 -------------EHKRDYELVILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIY 1661
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 31/114 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D NG Q +P F+ID+E G+++T + LDR+ + I
Sbjct: 1157 RVEAVDPDLGPNG---QVTYTLSP--SGDFTIDEE-GVIRTTHPLDREAAYSYRLI---- 1206
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
IR A D G P LS + T+ I V D+NDN P+F +
Sbjct: 1207 -IR--------------------AVDGGNPALSSSATVYINVNDLNDNAPVFSQ 1239
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 29/104 (27%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G I Y +I + KF ID +G++ T A+DR+D E Y T
Sbjct: 1271 GNISYSLIDS---SPKFIIDS-SGVISTAAAIDRED-----ESYYT-------------- 1307
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A+D G P + ++++ + D+NDN P+ Y
Sbjct: 1308 ------LTVLAQDGGNPPMQATASVRVRILDLNDNVPIAAMSAY 1345
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q ++ +D E ++Y+T A D+G P LS+ T++I + D+N+ P+F
Sbjct: 2447 QVIEFNDVETTIQLYVT--ATDSGAPALSEFVTVRIEITDVNNQSPVF 2492
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 3 VHATDVDPPSNGGTIQ-YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D NG IQ YRI+ +ID D D RE +Y+
Sbjct: 199 VTATDADEGING--IQGYRIVGG-------NIDN---------TFDLDVRVRETGVYM-- 238
Query: 62 DIRV-QALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DI V + LDR+ +Y +I A D G P+L+ T+ I V D+NDN P+F +
Sbjct: 239 DIVVNKTLDRE----TISMYTLIIEAYDGGDPRLTANTTVNIKVTDVNDNSPVFTLTSF 293
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ VHATD D NG ++Y II F+ID +G V LDR++ ER
Sbjct: 2618 LTVHATDRDIGYNG-EVEYSIISGT-YSDLFAIDVVSGAVTVRGELDREEVER------- 2668
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VQA DR +N QL+ + IT+ D N+ P F ++ Y
Sbjct: 2669 VEFTVQASDR--------------GMEN---QLASVVLVTITITDFNEFPPYFPQLFY 2709
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 23 KAPGERAKF--SIDKETGI-VKTLYALDRDDPEREKEIYITT-DIRVQA-LDRDDPEREK 77
+APG +ID ++G+ + Y L + I TT +IR +A LDR E+
Sbjct: 1669 QAPGTYVGMVVAIDGDSGVNGRITYELPEEIARGMFRINATTGEIRTKAILDR---EQRD 1725
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TV A D P D T+ + V D+NDN P F
Sbjct: 1726 SYVVTVYAMDGAFPARYDMATVLVYVMDVNDNNPTF 1761
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 34/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYR----IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
+QV+ATD D S G + Y ++ P ++FSI+ TG + + LDRD
Sbjct: 632 LQVNATDPDEGS-AGQVTYSPSTDLVPTP---SQFSINPLTGDLCVISRLDRD------- 680
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
++E V A D G L +++ +EDINDN P+F +
Sbjct: 681 -----------------AGQEEYNFAVKATDGG--GLMSHAFVRVILEDINDNVPVFTSL 721
Query: 117 QY 118
Y
Sbjct: 722 NY 723
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVI 1232
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1233 VKILDENDNKPQF 1245
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTY 3340
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG + Y I P + FSID TG+VK + LDR E + Y+ +
Sbjct: 844 VEATDKDLGPNG-HVMYSI---PTDTDNFSIDSMTGVVKIVNPLDR---EEQHVHYLKIE 896
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 897 ARDQA-------REE-------------PQLLSTVLLKVSLEDVNDNPPKF 927
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSPFTIDPARGEVKVTRLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E +TV A DNG+P + T+ I V DINDN P+F +
Sbjct: 3401 -------------EAVSGYTLTVQASDNGSPPRVNTTTVNIDVSDINDNAPVFSK 3442
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2303 VQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHK----- 2357
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+ND+ P+FD+ Y
Sbjct: 2358 --------------------IFVRAVDGGMPPLSSEVIVTVDVTDLNDHSPLFDQPVY 2395
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G I Y I G F ID+ETG+++T
Sbjct: 1054 MKVSAHDEDTGRDG-EIHYSIRDGSG-VGVFKIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++T+ A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTIYASDQGVVPLSSFVEVYIEVEDVNDNAP 1137
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I E + F ID ETG++K L LDR+ +R
Sbjct: 739 MNATDLDTGFNGKLVY--AISGGNEDSCFIIDMETGVLKILSPLDRETTDRYS------- 789
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ + ++I V D NDN P F + Y
Sbjct: 790 ------------------LNITVSDLGLPQKAAWRLLEIRVLDANDNPPEFLQESY 827
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D G P+L A + I V DIND P+F + Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGIPRLFAEYAANVTIHVIDINDCPPVFSKSLY 1884
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD + +R +
Sbjct: 2829 IQIRASDLDSGTNG-QVMYNLDQSQSVEVIESFAINMETGWITTLKELDHEKRDRYQ--- 2884
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
I V+A D G QLS + +TV D+ND+ P F
Sbjct: 2885 ----------------------IKVVASDLGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNR-KISYSLIDS--ADGQFSINEVSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDHGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQATYNLLVKATDGGGRFCQA-NIVLTLEDVNDNAPEF 3125
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------EMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------EMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------EMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------EMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTY 3340
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG ++Y I+ + KFSID TG+V+ L LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-HVRYSILT---DTDKFSIDSMTGVVRILNPLDR---EEQHVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 VEARDQA-------REE-------------PQLLSTVILKVSLEDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYAIIDG-NQGSPFTIDPARGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVATTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G I Y I G F ID+ETG+++T
Sbjct: 1054 MKVSARDEDTGRDG-EIHYSIRDGSG-VGVFRIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAP 1137
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADKESNA-LLVYHIVE-PSVHKYFTIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSASLY 1884
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D SNG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGSNG-QVMYNLDQSQSVDVIESFAINMETGWITTLRELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + + F ID TG++ + LD
Sbjct: 2303 VQVRATDADSEPNRGISYHMVGNHSKSHDHFHIDSGTGLISLVRTLDY------------ 2350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I+V A D G P LS + + V D+ND+ P+FD+ Y
Sbjct: 2351 -------------EQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLY 2395
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNR-KISYSLLNS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D P R L+ T+ I+V DINDN P+F+ +Y
Sbjct: 3196 TLTLKAVDHGLPRR-----------------LTATSTIVISVLDINDNPPVFEYREY 3235
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQATYHLLVKAADGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ ++ATD+D NG + I E + F +D ETG+ K L LDR+ +R
Sbjct: 737 LVMNATDLDTGFNGKLVY--AISGGNEDSCFMMDMETGMFKILSPLDRETTDRYTLNITV 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ + +IRV + + PE +E Y ++ED
Sbjct: 795 SDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSED 834
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------EMISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V+ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVRIARPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNTTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1809 YHIVE-PSVHRHFAIDSSTGAIHTVLSLDYE----ETSIF-------------------- 1843
Query: 79 IYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3252 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3297
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3298 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3342
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3357 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3403 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3447
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V LDR E + E +
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVNIARPLDR---ELQHEHSLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2306 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2353
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+N N P+F++
Sbjct: 2354 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNGNPPLFEQQ 2396
Query: 117 QY 118
Y
Sbjct: 2397 IY 2398
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3045 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3090
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3091 ---------------EQAVYHLLVRATDGGGRFCQA-SIVVTLEDVNDNAPEF 3127
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2831 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2880 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2920
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1795 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1846
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1847 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1887
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3148 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3197
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3198 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3237
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V LDR E + E +
Sbjct: 842 IQVEATDKDLGPNG-HVTYSIVT---DTDTFSIDSVTGVVNIARPLDR---ELQHEHSLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDARRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
>gi|156365975|ref|XP_001626917.1| predicted protein [Nematostella vectensis]
gi|156213810|gb|EDO34817.1| predicted protein [Nematostella vectensis]
Length = 943
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N T+ +K+ + +KF ID +TG++KT ++LDR
Sbjct: 569 VQATDRDSGINAATLYS--LKSVADYSKFIIDSKTGVIKTSFSLDR-------------- 612
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++ I VIA D G+PQLS + + V DIND+ P F + QY
Sbjct: 613 -----------ETQDQLNIRVIARDTGSPQLSAEVGIIVNVTDINDHRPAFSQRQY 657
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3248 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3293
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V D+NDN P+F + Y
Sbjct: 3294 -------------ESSHEYYLTVEATDGGTPSLSDVATVSINVTDVNDNSPVFSQDTY 3338
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK + LDR E + Y+
Sbjct: 840 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSVTGVVKIVSPLDR---EVQHVHYLK 892
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 893 IEARDQA-------REE-------------PQLLSTVLLKVSLEDVNDNPPRF 925
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y I + + F+ID G VK LDR
Sbjct: 3353 ITVMADDADGPSNS-HIRYSITDG-NQGSPFTIDPARGEVKVTRLLDR------------ 3398
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3399 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNY 3443
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KTL LDR+
Sbjct: 3041 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTLAPLDRE----------- 3086
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3087 ---------------EQAVYNLLVKATDGGGRFCQA-SIVLTLEDVNDNAPEF 3123
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1790 LVIRATDADKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDY------------ 1835
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1836 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1882
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T LDR
Sbjct: 1052 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFKIDEETGVIETSDGLDR------------ 1097
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I VED+NDN P
Sbjct: 1098 -------------ESTSHYWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAP 1135
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 737 MNATDLDTGFNGKLV--YAISGGNEDSCFVIDMETGMLKILSPLDRETTDKYTLNITASD 794
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 795 LGIPQKAAWRLVDIRVLDANDNPPEFLQESYFVEVSED 832
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2301 VQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHK----- 2355
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ALD G P LS + + V D+NDN P+FD+ Y
Sbjct: 2356 --IFVRALD------------------GGMPPLSSDVVVTVDVTDLNDNPPLFDQQIY 2393
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q A+D+D +NG + Y + ++ F+I+ ETG + TL LD ++
Sbjct: 2827 IQARASDLDSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEE-------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
RD + I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 -----------RDHYQ------IKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2916
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q A D D +N ++Y I+K+ + + ID E+G+V T ALDR
Sbjct: 471 IQFQARDADEGANS-EVRYSILKS-NQDSLIDIDPESGLVTTAAALDR------------ 516
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + EI+ V+A D G P LS T+ + VED+NDNEP+F++ Y
Sbjct: 517 -------------ETQMEIWFLVVAVDGGEPALSSTATVTVLVEDVNDNEPVFEQQLY 561
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A+D D NG I+Y I+ F +D GI+ T LDR EI +
Sbjct: 2159 MQVFASDADSGMNG-QIEYSILSG-NLNGAFILDSVRGILATNVLLDR-------EITPS 2209
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ +QA DR G P LS T+++ V D+NDN P
Sbjct: 2210 YKLVLQAADR------------------GNPPLSSTATVRVQVVDVNDNSP 2242
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 32/120 (26%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+H P +G GTI Y I+ GE R +F+I+ TG + T LDR
Sbjct: 1743 IHTAQASDPDHGENGTIHYSIL---GEDYRGRFTINSHTGAISTTQVLDR---------- 1789
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +T+ A D G LS + + + D NDN P F R Y
Sbjct: 1790 ---------------EETQNYTLTIQARDYGPTPLSSFTQLHLVLLDQNDNIPSFTRKSY 1834
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 38 GIVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDPEREKEIYITV 83
G+V T+ A+D+D + + Y+ I ALDR E+ + + V
Sbjct: 1103 GLVGTVKAVDKDSGKNGQLSYLLLSDGKFFRINTKTGEIINWVALDR---EQYSQHSLKV 1159
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ D G P+L+ T+ I + DINDN P F +
Sbjct: 1160 MVTDQGHPRLNATATVHILIADINDNAPQFTHL 1192
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ALDR+ E +TV D G P L+ + + +TV D NDN P+F +Y
Sbjct: 2518 VLCNALDRETTESYA---LTVSVSDRGMPPLNSSTVVMVTVTDCNDNAPVFSSTEY 2570
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
GE S +G K L+ L+ E+ + +T + D E E+ +TV A
Sbjct: 1545 GENGIVSFSIISGNKKGLFTLE----EKTGLLLLTAPL--------DYETERFHRLTVRA 1592
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D G P LS T+ + V D+ND P+F + Y
Sbjct: 1593 LDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIY 1625
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D N + Y ++ PG FSI+ TG++ T LDR E++ + T
Sbjct: 1640 IRVSATDEDSEENA-VVWYSLLPGPGYEL-FSINPYTGLITTTSYLDR-----EQQQHFT 1692
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RVQA RD R LS T+ +V D NDN P F + +
Sbjct: 1693 --LRVQA--RDSSARP----------------LSSTTTVMCSVLDDNDNPPEFMQSSF 1730
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 30/121 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK---FSIDKETGIVKTLYALDRDDPEREKEI 57
+QV ATD D P GT+ Y + ++A F I+ TG E+
Sbjct: 576 LQVAATDADSP-EFGTLLYSLSDGFDKQATHPLFQINPHTG-----------------EL 617
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
++ DI DRD + +I I AED G LS + I +ED+NDN P+F +
Sbjct: 618 CVSQDI-----DRDTGQTVHDILIK--AEDPG--GLSAQTYVHIEIEDLNDNAPVFSPEE 668
Query: 118 Y 118
Y
Sbjct: 669 Y 669
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +IRVQ + D E I + V+A D+G + C + IT+ DINDN P F+ Y
Sbjct: 2089 TGEIRVQKDNSLDFEVNPHIQLVVLA-DSGLQ--TAHCRVSITLVDINDNAPQFEHSSY 2144
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYLIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTY 3340
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK ++ LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSVTGVVKIIHTLDR---EVQPVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P+F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVLLKVSLEDVNDNPPVF 927
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2303 VHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDFEQSQQHK----- 2357
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FDR Y
Sbjct: 2358 --------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDRQIY 2395
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y II + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIRYSIIDG-NQGNPFTIDSVKGEVKVTRLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P F + Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSQENY 3445
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + + E F+I+KETG + TL LD
Sbjct: 2829 IQIRASDLDSGTNG-QVTYSLDLSQSEEVIESFTINKETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +T+ D+ND+ P F
Sbjct: 2878 ---------------EKRANYQIKVVASDHGEKVQLSSTAVVDVTITDVNDSPPRF 2918
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRATDSDKESNA-LLVYHIVE-PSVHKYFAIDSNTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
+ TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSVY 1884
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1054 MTVSAHDEDTGRDG-EIRYSIRDGSG-IGVFKIDEETGVIETC----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYAADQGVVPLSSFIEVYIEVEDVNDNAP 1137
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y + + E KF ++ +TG +K L ALDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELKILTALDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +Y ++ +G + +A + +T+ED+NDN P F
Sbjct: 3089 ---------------HQAVYNLLVKATDGGGRFCEA-NIVLTLEDVNDNPPEF 3125
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I E + F ID ETG++K LDR+ +R
Sbjct: 739 MNATDLDTGFNGKLV--YAISGGNEDSSFIIDMETGMLKVFSPLDRETKDRYS------- 789
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ + + + V D NDN P F + Y
Sbjct: 790 ------------------LNITVYDLGIPQKATWHLLDLIVLDANDNPPEFLQESY 827
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNQ-KISYLLMNS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A+D+ P R L+ ++ ++V DINDN P+F+ +Y
Sbjct: 3196 TLTVKAVDQGLPRR-----------------LTATSSVIVSVLDINDNPPVFEYREY 3235
>gi|391338388|ref|XP_003743540.1| PREDICTED: neural-cadherin-like [Metaseiulus occidentalis]
Length = 3036
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D NG ++Y +++ P ++ KFS+D+ TG ++T DR+
Sbjct: 932 IRVRAKDNDKGHNG-QVRYSMVQQPNQKGTKFSVDEVTGEIRTNKVFDREG--------- 981
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G+P L C+ K+ + D+NDN P+FDR +Y
Sbjct: 982 -----------DD---GRFVSVTVKATDRGSPPLEGVCSFKVEITDVNDNPPLFDRQEY 1026
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G K Y +DR D R+ I + +++Q LDR++ R + + ++A D+GTP
Sbjct: 1832 QGGKSKVSYQIDRSSDKRRQFTINNSGVVKIQRPLDREETPRHQ---VKILAIDDGTPAR 1888
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 1889 TATATLTVVVSDINDNPPRF 1908
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 34 DKETGIVKTL--YALDRDDPEREK--------EIYITTDIRVQALDRDDPEREKEIYITV 83
D+E+ IV L +D D E K EIY+ ++ LDRD P + TV
Sbjct: 1489 DRESDIVYFLTGQGVDNTDSENNKFAINQTTGEIYV-----LKPLDRDLPHGRSQWRFTV 1543
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMF 113
AED G L + + ++DINDN P F
Sbjct: 1544 FAEDEGGNGLVGFADVLVNLKDINDNPPFF 1573
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E+ ++ +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1201 DYEKIQQYNLTIRVENNGIQQLASEATVYIVLEDVNDEIPLF 1242
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 33/124 (26%)
Query: 1 MQVHATDVDPPSNG--GTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + ATD D P G + Y I + GE F+ID+ETG++ T
Sbjct: 1593 MTMTATDYDDPMEGTNAKLTYSIEQNQVNENGELI-FAIDEETGVISTA----------- 1640
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR E E I V+A D G + + T+KI +DIND P F
Sbjct: 1641 ----------VCCLDR---ETNPEYTIKVVAVDGGGNKGAGTATIKI--KDINDMPPEFT 1685
Query: 115 RVQY 118
+ ++
Sbjct: 1686 KKEW 1689
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK + LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-RVTYSILT---DTDKFSIDSMTGVVKIVDPLDR---ELQHVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA + PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQASEE--------------------PQLLSTVLLKVSLEDVNDNPPKF 927
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGGPFTIDPARGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKRIY 3445
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2303 VQVKATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHK----- 2357
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D+G P LS + + V D+NDN P+FD+ Y
Sbjct: 2358 --------------------IFVRAVDSGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY 2395
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1054 MAVSAHDEDTGRDG-EIRYSIRDGSG-VGVFKIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1137
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y + PG KF ++ +TG +KTL LDR+
Sbjct: 3043 LQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTLVPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYNLLVKATDGGGRFCQA-HIVLTLEDVNDNAPEF 3125
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ ++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 737 ISMNATDLDTGFNGKLV--YAISGGNEDSCFIIDMETGMLKILSPLDRETTDKYTLNISV 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 795 SDLGIPQKAAWHLLDIRVLDANDNPPEFLQERYFVEVSED 834
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGTNG-QVMYSLDQSQSVEVLESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRAVDGDKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLY 1884
>gi|444706660|gb|ELW47986.1| Cadherin-related family member 2 [Tupaia chinensis]
Length = 1547
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 629 IQAHDND-EPGTNNSRLVFSLLPGPYSH-NFSVDPDTGLLRNLGPLDREAI--------- 677
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G PQLS + ITVEDINDN P+F++ Y
Sbjct: 678 -----------DPALGGRIVLTVLVADCGVPQLSTEVNVTITVEDINDNMPVFNQSSY 724
>gi|187954583|gb|AAI40920.1| DCHS2 protein [Homo sapiens]
Length = 1368
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G+++ +++ F+ID E+G++ T+ ALDR
Sbjct: 586 PCNLGSLESKMVHTAECGPSFAIDSESGVISTIRALDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|34534729|dbj|BAC87093.1| unnamed protein product [Homo sapiens]
Length = 1366
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G+++ +++ F+ID E+G++ T+ ALDR
Sbjct: 586 PCNLGSLESKMVHTAECGPSFAIDSESGVISTIRALDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFS+D +TG + + LD
Sbjct: 3251 LQVYAASRDIEANA-EITYSIISG-NEHGKFSMDSKTGAIFIIENLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3297 -------------ESSHEYYLTVEATDGGTPSLSDVATVNINVSDINDNTPVFSQDTY 3341
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I+Y II+ + + F+ID G VK LDR
Sbjct: 3356 ITIMADDADGPSNS-HIRYSIIEG-NQGSPFTIDPIRGEVKVTKPLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3402 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3446
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG + T+ +LD
Sbjct: 1793 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDATTGAIHTVLSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + + TV D GTP+L C +T+ DIND P+F + Y
Sbjct: 1839 -------------EETRVFHFTVQVHDMGTPRLFAECAANVTIHVIDINDCPPVFSKPLY 1885
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G + Y++ G +K F ID TG++ + ALD + ++ K
Sbjct: 2304 LQVKATDSDSEPNRG-VSYQMF---GNHSKSHDHFHIDSNTGLISLVRALDYEQFQQHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V A D G P LS + + V D+NDN P+F++
Sbjct: 2359 ------------------------VFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2394
Query: 117 QY 118
Y
Sbjct: 2395 IY 2396
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + +FSID TG+V+ + LDR E+
Sbjct: 843 IQVEATDKDLGPS--GHVTYSILT---DTDRFSIDSATGVVRIIQPLDR-------EVQP 890
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++ TV+ +K++++D+NDN P F
Sbjct: 891 VHYLKIEA--RDQATEEPRLFSTVL--------------LKVSLDDVNDNPPKF 928
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ G F+I+ ETG + TL LD
Sbjct: 2830 IQIRASDLDSGTNG-QVMYSLDQSQGADIIESFAINVETGWITTLKELDH---------- 2878
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I VIA D+G QLS + +TV D+ND+ P F
Sbjct: 2879 ---------------EERASYQIKVIASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2919
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+
Sbjct: 3044 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLAPLDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A T+ +T+ED+NDN P F
Sbjct: 3090 ---------------EQAVYNLLVKATDGGGRSCQA-TIVLTLEDVNDNAPEF 3126
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI + +GI++ LDR+ ++ +Y
Sbjct: 3147 RVQATDADAGLNR-KISYSLIDS--ADGQFSISEVSGIIQLEKHLDRE----QQAVYT-- 3197
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A D G P +L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3198 -------------------LTLKAVDQGVPRKLTATSTVVVSVLDINDNPPVFEYREY 3236
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ TG+++T
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFRIDEVTGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1138
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I + + F+ID E+G++K L LDR
Sbjct: 740 MNATDLDSGFNGKLV--YAISGGNDDSCFTIDMESGMLKVLSPLDR-------------- 783
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -----------EVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNPPEFLQESY 828
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID TG + + +LD
Sbjct: 3248 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDPRTGAIFLIESLDY------------ 3293
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3294 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDPY 3338
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P N I Y II + + F+ID G VK LDR
Sbjct: 3353 ITVMADDADGPLNS-HIHYSIIDG-NQGSPFTIDPARGEVKVTKLLDR------------ 3398
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P ++ T+ I V D+NDN P+F R Y
Sbjct: 3399 -------------ETISGYTLTVQASDNGSPPRANTTTVNIDVSDVNDNAPVFSRENY 3443
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y ++ + FSID TG+V + LD PE + Y+
Sbjct: 840 IQVEATDRDLGPNG-QVTYSLLT---DTDTFSIDSVTGVVTVVRPLD---PEVQHVHYLK 892
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA + PQL +K++VED+NDN P F
Sbjct: 893 VEARDQATEE--------------------PQLFSTVLLKVSVEDVNDNPPRF 925
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F +D TG++ + LD + + K
Sbjct: 2301 VQVRATDSDSEPNRGVSYHMFGNHSKSYDHFHVDSSTGLISLVRTLDYEQVHQHK----- 2355
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FD+ Y
Sbjct: 2356 --------------------IFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY 2393
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1790 LVIRATDADRESNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDY------------ 1835
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1836 -------------EETSTFHFTVQVHDMGTPRLFAKYAANVTIHVIDINDCPPVFSKSLY 1882
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KTL LDR+
Sbjct: 3041 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTLAPLDRE----------- 3086
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y V+ +G + A + +T++D+NDN P F
Sbjct: 3087 ---------------EQAVYHLVVKATDGGGRFCQA-NIVLTLDDVNDNAPEF 3123
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1052 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFKIDEETGVIETS----------------- 1092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + + VED+NDN P
Sbjct: 1093 --------DRLDRESAPHYWLTVYATDQGVVPLSSFVEIYVEVEDVNDNAP 1135
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
+QV A+D+D +NG + Y + P + F+I+ ETG + TL LD
Sbjct: 2827 IQVRASDLDSGTNG-QVMYSL--DPSQSVDITESFAINMETGWITTLKELDH-------- 2875
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2876 -----------------EKRDNYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2916
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+ATD+D NG + I E + F ID +TG++K L LDR+ TTD
Sbjct: 737 VNATDLDTGFNGKLVY--AISGGNEDSCFLIDMDTGMLKILSPLDRE----------TTD 784
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 785 ---------------KYTLNITVSDLGIPQKAAWHLLAVRVLDANDNPPEFFQESY 825
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K Y + +P+ I+ T + R D E++ E + V DNG+P S +
Sbjct: 1171 KLTYKITSGNPQGFFSIHPRTGLITTTSRRLDREQQDEHILEVTVTDNGSPPRSTVARVI 1230
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1231 VKILDENDNKPQF 1243
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 26/91 (28%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
+FSI + +GI++ LDR+ +QA+ +T+ A D
Sbjct: 3168 GQFSISESSGIIQLEKPLDRE---------------LQAV----------YTLTLKATDQ 3202
Query: 89 GTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
G P+ L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3203 GLPRRLTATSTVVVSVLDINDNPPVFEYREY 3233
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y I+ E KFSID TG + + LD
Sbjct: 3249 LQVYAVSRDIEANA-EITYSIMSG-NEHGKFSIDSRTGAIFVIENLDY------------ 3294
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +E Y+T+ A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3295 -------------ESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTY 3339
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y ++ + KFSID TG+VK + LDR E + Y+
Sbjct: 841 IQVEATDKDLGPNG-HVTYSVLT---DTDKFSIDGVTGVVKVMRPLDR---EAQHVHYLK 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 894 IEARDQA-------REE-------------PQLLSTVLLKVSLEDVNDNPPKF 926
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y II + + F++D G VK LDR
Sbjct: 3354 ITVMADDADGPSNS-HIRYSIIDG-NQGSPFTVDPTRGEVKVTKLLDR------------ 3399
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3400 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNY 3444
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2302 VQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHK----- 2356
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FD+ Y
Sbjct: 2357 --------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIY 2394
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1791 LVIRATDADRESNA-LLVYHIVE-PSLHKYFAIDSSTGAIHTVLSLDY------------ 1836
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1837 -------------EETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1883
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G ++Y I G F ID+ETG+V+T LDR
Sbjct: 1053 MTVSAHDEDTGRDG-EVRYSIRDGSG-VGVFRIDEETGVVETAERLDR------------ 1098
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I VED+NDN P
Sbjct: 1099 -------------ESTPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAP 1136
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ PG KF+++ +TG ++TL LDR+
Sbjct: 3042 LQVSATDADIRSNA-EITYTLL-GPGAE-KFTLNPDTGELRTLAPLDRE----------- 3087
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3088 ---------------EQGVYNLLVKATDGGGRSCQA-NLVLTLEDVNDNAPEF 3124
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 738 MNATDLDTGFNGKLVY--AISGGNEDSCFIIDMETGMLKILSPLDRETTDKYTLNVTVSD 795
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + D+RV + + PE +E Y ++ED
Sbjct: 796 LGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSED 833
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y I+ E KFSID TG + + LD
Sbjct: 3255 LQVYAVSRDIEANA-EITYSIMSG-NEHGKFSIDSRTGAIFVIENLDY------------ 3300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +E Y+T+ A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3301 -------------ESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTY 3345
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y ++ + KFSID TG+VK + LDR E + Y+
Sbjct: 841 IQVEATDKDLGPNG-HVTYSVLT---DTDKFSIDGVTGVVKVMRPLDR---EAQHVHYLK 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 894 IEARDQA-------REE-------------PQLLSTVLLKVSLEDVNDNPPKF 926
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y II + + F++D G VK LDR
Sbjct: 3360 ITVMADDADGPSNS-HIRYSIIDG-NQGSPFTVDPTRGEVKVTKLLDR------------ 3405
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3406 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNY 3450
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ K
Sbjct: 2308 VQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQFQQHK----- 2362
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FD+ Y
Sbjct: 2363 --------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIY 2400
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1797 LVIRATDADRESNA-LLVYHIVE-PSLHKYFAIDSSTGAIHTVLSLDY------------ 1842
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1843 -------------EETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1889
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G ++Y I G F ID+ETG+V+T LDR
Sbjct: 1053 MTVSAHDEDTGRDG-EVRYSIRDGSG-VGVFRIDEETGVVETAERLDR------------ 1098
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I VED+NDN P
Sbjct: 1099 -------------ESTPHYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAP 1136
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ PG KF+++ +TG ++TL LDR+
Sbjct: 3048 LQVSATDADIRSNA-EITYTLL-GPGAE-KFTLNPDTGELRTLAPLDRE----------- 3093
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3094 ---------------EQGVYNLLVKATDGGGRSCQA-NLVLTLEDVNDNAPEF 3130
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD+D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 738 MNATDLDTGFNGKLVY--AISGGNEDSCFIIDMETGMLKILSPLDRETTDKYTLNVTVSD 795
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + D+RV + + PE +E Y ++ED
Sbjct: 796 LGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSED 833
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++A D +N I Y I+ E KFSID TG + + +LD
Sbjct: 3251 LQIYAASRDIEANA-EITYSIVSG-NEHGKFSIDSTTGAIFIIESLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 3297 -------------ESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTY 3341
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G +K LDR
Sbjct: 3356 ITVMADDADGPSNN-CIHYTIIDG-NQGNPFTIDPTRGEIKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A DNG P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------EKISGYTLTVQASDNGNPPRLNTTTVNIDVSDVNDNPPVFSKGNY 3446
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSID+ +GI++ LDR+
Sbjct: 3147 RVQATDADAGMNR-KIHYSLVNS--AEGQFSIDEFSGIIRLEKPLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+QA+ +T+ A D G P+ LS ++ ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQAV----------YTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEHREY 3236
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
+QV TD+D NG + Y + P + F+I+ ETG + TL LD
Sbjct: 2830 IQVKGTDLDSGLNG-QVTYSL--DPSQELDTIESFTINMETGWITTLKELDH-------- 2878
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ + ITVIA D G QLS +++TV D+NDN P F
Sbjct: 2879 -----------------EKRDKYRITVIASDRGEKIQLSSLAVVEVTVTDVNDNPPRF 2919
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG ++Y ++ + KF+I+ TG+VK + LDR+ E+ ++
Sbjct: 843 IQIEATDKDLGANG-EVKYSLLT---DTDKFTINAVTGVVKVVGVLDRE----EQHVHF- 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD P E +++ TVI +K++VED+NDN P F
Sbjct: 894 --LKIEA--RDQPTEEPQLFSTVI--------------LKVSVEDVNDNPPKF 928
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P R F+ID TG ++T+ +LD +
Sbjct: 1793 LVIRATDADKESNA-LLVYQIVE-PSVRKYFAIDSSTGAIRTVTSLDYE----------- 1839
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQ 117
E I+ +V D G P+L A + I V DIND P+F R
Sbjct: 1840 ---------------ETNIFRFSVQVHDMGIPRLYAEYAANVTIYVIDINDCPPVFSREL 1884
Query: 118 Y 118
Y
Sbjct: 1885 Y 1885
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +N G I Y +++ E F ID TG++ T LD + ++ K
Sbjct: 2304 VQVSATDADSGTNRG-ISYHLVEDNSESHDYFHIDSSTGLILTARTLDYEQIKQHK---- 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D G LS + + V D+NDN P+F+++ Y
Sbjct: 2359 ---------------------LLVRAIDGGMLPLSSDTVVTVDVTDLNDNPPLFNQLLY 2396
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+E GI++T
Sbjct: 1055 MTVSAYDEDEGRDG-EIRYSIRDGSG-IGVFRIDEEKGIIETA----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I V D+NDN P
Sbjct: 1096 --------DRLDRETTSHYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAP 1138
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 34/115 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + E KF + +TG +KT LDR
Sbjct: 3044 MQVSATDADIRSNA-EITYTLHGTGAE--KFRLTPDTGELKTSMPLDR------------ 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI--TVEDINDNEPMF 113
E++ Y+ V A D G C I T+ED+NDN P F
Sbjct: 3089 -------------EQQAVYYLLVKATDGG----GRFCQANIILTLEDVNDNAPEF 3126
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+T+ A D GTP LSD T+ + V D+NDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTY 3340
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK ++ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSATGVVKIMHPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G VK LDR
Sbjct: 3355 ITVLADDADGPSNS-HIHYSIIDG-NQGGPFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + + I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTAVNIDVSDVNDNAPVFSRGNY 3445
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD + +R
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQL---SGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHT- 2357
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2358 ------------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETGI++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGIIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRAADADKDSNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLY 1884
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADSGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESY 827
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +N + Y + ++ F+I+ ETG + TL LD ++
Sbjct: 2829 IQIRASDADSGTNS-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEE-------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
RD+ + I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2880 -----------RDNYQ------IKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A D D SN I Y + + E KF ++ +TG +KT LDR+ E+ +Y
Sbjct: 3043 MQISAADADIRSNA-EITYTLSGSGAE--KFQLNPDTGELKTSAPLDRE----EQAVY-- 3093
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V+A DR + I +T+ED+NDN P F
Sbjct: 3094 -HLLVRATDRGGRFCQASIV--------------------LTLEDVNDNAPEF 3125
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3253 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3298
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+T+ A D GTP LSD T+ + V D+NDN P+F + Y
Sbjct: 3299 -------------ESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTY 3343
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK ++ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSATGVVKIMHPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G VK LDR
Sbjct: 3358 ITVLADDADGPSNS-HIHYSIIDG-NQGGPFTIDPVRGEVKVTKLLDR------------ 3403
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3404 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3448
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD + +R
Sbjct: 2306 VQVRATDSDSEPNRG-ISYQLF---GNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHT- 2360
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2361 ------------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2396
Query: 117 QY 118
Y
Sbjct: 2397 IY 2398
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETGI++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGIIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1795 LVIRAADADKDSNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDY------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1841 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLY 1887
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3149 RVQATDADSGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3198
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3199 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3238
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESY 827
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +N + Y + ++ F+I+ ETG + TL LD ++
Sbjct: 2832 IQIRASDADSGTNS-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEE-------- 2882
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
RD+ + I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2883 -----------RDNYQ------IKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2921
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A D D SN I Y + + E KF ++ +TG +KT LDR+ E+ +Y
Sbjct: 3046 MQISAADADIRSNA-EITYTLSGSGAE--KFQLNPDTGELKTSAPLDRE----EQAVY-- 3096
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+ V+A DR + I +T+ ++ P+ S A ITV + + + RVQ
Sbjct: 3097 -HLLVRATDRGGRFCQASIVLTLEDVNDNAPEFS-ADPYAITVFENTEPGTLLTRVQ 3151
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D G+P LSD T+ I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGSPSLSDVATVSINVTDINDNAPVFSQDTY 3340
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG ++Y I+ + KFSID TG+VK L LDR E + Y+
Sbjct: 842 IQVEATDKDLGPNG-HVRYSILT---DTDKFSIDSVTGVVKILNPLDR---EEHQVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K++++D+NDN P F
Sbjct: 895 VEARDQA-------REE-------------PQLLSTVILKVSLDDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYAIIDG-NQGSPFTIDPARGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRENY 3445
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G I Y I G F ID+ETG+++T
Sbjct: 1054 MKVSARDEDMGRDG-EIHYSIRDGSG-VGVFRIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAP 1137
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADRESNA-LLVYHIVE-PSVHKYFTIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSTSLY 1884
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D SNG + Y + ++ F+++ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGSNG-QVMYNLDQSQSVDVIESFAVNMETGWITTLRELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + + F +D TG++ + LD
Sbjct: 2303 VQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDY------------ 2350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I+V A D G P LS + + V D+ND+ P+FD+ Y
Sbjct: 2351 -------------EQFRQHQISVRAVDGGMPPLSSDVVVTVDVTDLNDHPPLFDQQLY 2395
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITYTLF-GPGAE-KFKLNPDTGELKTSAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y ++ +G + A + +T+ED+NDN P F
Sbjct: 3089 ---------------EQAAYHLLVKATDGGGRFCQASVV-LTLEDVNDNAPEF 3125
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNR-KISYSLLNS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D P R L+ T+ I+V DINDN P+F+ +Y
Sbjct: 3196 TLTLKAVDHGLPRR-----------------LTATGTIVISVLDINDNPPVFEYREY 3235
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ ++ATD+D NG + + E + F +D ETG++K L LDR+ +R
Sbjct: 737 LVMNATDLDTGFNGKLVY--AVSGGNEDSCFIMDMETGMLKILSPLDRETTDRYTLNITV 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ + +IRV + + PE +E Y ++ED
Sbjct: 795 SDLGLPQRAAWHLLEIRVLDANDNPPEFLQESYFVEVSED 834
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3253 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3298
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+T+ A D GTP LSD T+ + V D+NDN P+F + Y
Sbjct: 3299 -------------ESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTY 3343
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK + LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSATGVVKITHPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G VK LDR
Sbjct: 3358 ITVLADDADGPSNS-HIHYSIIDG-NQGGPFTIDPVRGEVKVTKLLDR------------ 3403
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3404 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3448
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD + +R
Sbjct: 2306 VQVRATDADSEPNRG-ISYQL---SGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRHT- 2360
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+F++
Sbjct: 2361 ------------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQ 2396
Query: 117 QY 118
Y
Sbjct: 2397 IY 2398
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETGI++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGIIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1795 LVIRAADADKDSNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDY------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1841 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPLY 1887
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3149 RVQATDADSGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3198
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3199 TLSLKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3238
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESY 827
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +N + Y + ++ F+I+ ETG + TL LD ++
Sbjct: 2832 IQIRASDADSGTNS-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEE-------- 2882
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
RD+ + I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2883 -----------RDNYQ------IKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2921
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A D D SN I Y ++ + E KF ++ +TG +KT LDR+ E+ +Y
Sbjct: 3046 MQISAADADIRSNA-EITYTLLGSGAE--KFQLNPDTGELKTSAPLDRE----EQAVY-- 3096
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+ V+A DR + I + + ++ P+ S A ITV + + + RVQ
Sbjct: 3097 -HLLVRATDRGGRFCQASIVLALEDVNDNAPEFS-ADPYAITVFENTEPGTLLTRVQ 3151
>gi|297712819|ref|XP_002832925.1| PREDICTED: cadherin-related family member 2, partial [Pongo abelii]
Length = 797
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 477 IQAHDND-EPGTNNSRLLFSLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 525
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 526 -----------DPALEGRIVLTVLVSDCGDPVLSTKVNVTITVEDINDNLPIFNQSSY 572
>gi|332822760|ref|XP_003311038.1| PREDICTED: cadherin-related family member 2 [Pan troglodytes]
Length = 998
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALEGRIVLTVLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 700
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 2250 LQVYAASRDIEANA-DITYSIIGG-NEHGKFSIDSKTGAIFIIENLDY------------ 2295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 2296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 2340
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P N I Y II + F+ID G VK LDR
Sbjct: 2355 LTVMADDADGPLNS-HIHYSIIDG-NQGNPFTIDPTRGEVKVTKLLDR------------ 2400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 2401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFAQGNY 2445
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF+++ +TG +KTL LDR+
Sbjct: 2043 MQVAATDADIRSNA-EITYTLF-GPGAE-KFNLNPDTGELKTLAPLDRE----------- 2088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + +T+ED+NDN P F
Sbjct: 2089 ---------------EQAVYNLLVKATDGGGRFCQAHVV-LTLEDVNDNAPEF 2125
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD ++ T
Sbjct: 792 LVIRATDADKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDYEE---------T 840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
+ R TV D GTP+L A + I V DIND P+F + Y
Sbjct: 841 STFR----------------FTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLY 884
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI++ +GI++ LDR E+
Sbjct: 2146 RVQATDADAGLNR-KIAYSLINS--ADGQFSINELSGIIQLEKPLDR-------ELQAVY 2195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 2196 TLTVKAVDQGVPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 2235
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
++ DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 88 IETADRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 134
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 33/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
++V ATD D N G I Y + G +K F ID TG++ + ALD
Sbjct: 1303 VRVRATDADSEPNRG-ISYHM---SGNHSKSHDHFHIDSSTGVISLVRALDY-------- 1350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E+ ++ I V A D G P LS + + V D+NDN P+FD
Sbjct: 1351 -----------------EQVRQHRIAVRAVDGGMPPLSSEVVVTVDVTDLNDNPPLFD 1391
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 3 VHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
VH DP PS+ + YRI + F+I +TG+ ITT
Sbjct: 156 VHIEAFDPDPSSNDKLTYRITSG-NPQGFFTIHPKTGL-------------------ITT 195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R LDR E++ E + V DNG+P S + + + D NDN+P F
Sbjct: 196 TSR--KLDR---EQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQF 242
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIF 642
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|355688167|gb|AER98413.1| FAT tumor suppressor-like protein 1 [Mustela putorius furo]
Length = 1538
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG I+I
Sbjct: 409 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTG-----------------AIFII 449
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 450 ENL--------DYESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 499
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I+Y II + + F+ID G VK LDR
Sbjct: 514 ITVMADDTDGPSNS-HIRYSIIDG-NQGSPFTIDPTRGEVKVTKLLDR------------ 559
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 560 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRENY 604
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI++ +GI++ LDR
Sbjct: 305 RVQATDADAGLNQ-KISYSLIDSAD--GQFSINELSGIIQLEKPLDR------------- 348
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E++ +T+ A D G P+ L+ T+ ++V DINDN P+F+ +Y
Sbjct: 349 ------------EQQAVYTLTLKATDQGLPRRLTATSTVVVSVLDINDNPPVFEYREY 394
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN + Y + PG KF ++ +TG +KTL LDR+
Sbjct: 202 LQVSATDADIRSNA-DMTYTLF-GPGAE-KFKLNPDTGELKTLAPLDRE----------- 247
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY ++ +G + A + +T+ED+NDN P F
Sbjct: 248 ---------------EQAIYNLLVKATDGGGRFCQA-NLVLTLEDVNDNAPEF 284
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Multiple epidermal growth factor-like
domains protein 2; Short=Multiple EGF-like domains
protein 2; Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIF 642
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog),
5 prime [Microtus ochrogaster]
Length = 3301
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 340 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 394
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 395 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 433
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 976 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1029
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++T++D+NDN P+F
Sbjct: 1030 ---------------------LTAYAVDRGVPPLRTPVSIQVTIQDVNDNAPVF 1062
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 560 LRVTATDQDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 605
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 606 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 646
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R + F ID +G++ T +DR+ E +
Sbjct: 448 LQLRATDGDAPPNA-NLRYRFVGSPAARKEAAAAFEIDPRSGLISTSGRVDREHMESYEL 506
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 507 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 553
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 710 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 756
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 915 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 961
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD + I V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTY 3340
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SNG + Y I+ + KF+ID TG+V+ +Y LDR E + Y+
Sbjct: 842 IQVEATDKDLGSNG-HVTYSILT---DTDKFAIDSMTGVVRVVYPLDR---EAQPVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA + PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQATEE--------------------PQLFSIVLLKVSLEDVNDNPPRF 927
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G V+ LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSPFTIDPARGEVRVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPIFSRGNY 3445
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G + F ID TG++ + LD + ++ +
Sbjct: 2303 IQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDGSTGVISLVRTLDYEQFQQHR----- 2357
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D G P LS + + V D+NDN P+FD+ Y
Sbjct: 2358 --------------------IFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQLY 2395
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KTL LDR+
Sbjct: 3043 MQVSATDADIRSNA-EITY-TLSGPGAE-KFKLNPDTGELKTLAPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY ++ +G + A M +T+ED+NDN P F
Sbjct: 3089 ---------------EQAIYNLLVKATDGGGRFCQANIM-LTLEDVNDNAPEF 3125
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1792 LVIRATDADKESNA-LLVYHIVE-PSIHKYFAIDSSTGAIHTVLSLDY------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1838 -------------EETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLY 1884
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D+D +NG + Y + ++ FSI+ ETG + TL LD
Sbjct: 2829 IQIRASDLDSGTNG-QVMYSLDQSQSVEVIESFSINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ER I V+A D G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------ERRDNYQIKVVASDYGEKVQLSSTAIVAVTVTDVNDSPPRF 2918
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G ++Y I G F ID+ETG+++T
Sbjct: 1054 MTVSAHDEDTGRDG-EVRYSIRDGSG-VGVFKIDEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAP 1137
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
++ATD D NG + I E + F ID ETG++K L LDR+ ++
Sbjct: 739 MNATDPDTGFNGKLV--YAISGGNEDSCFIIDMETGMLKILSPLDRETTDKYTLNITAFD 796
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 797 LGMPQKAAWHLLDIRVLDANDNPPEFLQESYFVEVSED 834
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI++ +GI++ LDR+ + +Y T
Sbjct: 3146 RVQATDADAGLNR-KISYSLINS--ADGQFSINELSGIIQLEKPLDRE----LQSVYTLT 3198
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3199 ---LKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3235
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 340 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 394
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 395 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 433
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 976 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1029
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1030 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1062
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 560 LRVTATDQDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 605
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 606 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 646
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R + F ID +G++ T +DR+ E +
Sbjct: 448 LQLRATDGDAPPNA-NLRYRFVGSPAARKEAAAAFEIDPRSGLISTSGRVDREHMESYEL 506
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 507 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 553
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 710 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 756
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 915 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 961
>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
Length = 4589
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3251 LQVYAASRDIEANA-EITYSIING-NEHGKFSIDSKTGAIFIIENLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T I V DINDN P F + Y
Sbjct: 3297 -------------ESAHEYYLTVEATDGGTPSLSDVATANINVTDINDNTPSFSQDTY 3341
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SNG + Y I+ + KF ID TG+VK ++ LDR E + Y+
Sbjct: 843 IQVEATDKDLGSNG-HVTYSILT---DTDKFLIDSTTGVVKIVHPLDR---EVQHVHYLK 895
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA G PQL +K+++ED+NDN P F
Sbjct: 896 IEARDQA--------------------KGEPQLFSTVLLKVSLEDVNDNPPKF 928
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II+ + + F+ID G VK LDR
Sbjct: 3356 ITVLADDADGPSNS-LIHYSIIEG-NQGSPFTIDPVKGEVKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------ETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNY 3446
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
++V ATD D N G I Y++ G +K F ID TG++ L LD + ++ K
Sbjct: 2304 VKVRATDSDSEPNRG-ISYQMF---GNHSKSQDHFHIDGSTGLISLLRTLDYEQFQQHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+FD+
Sbjct: 2359 ------------------------IFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQ 2394
Query: 117 QY 118
Y
Sbjct: 2395 IY 2396
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1793 LVIRATDADKESNA-LLVYHIVE-PSVHKYFAIDSTTGAIHTVLSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1839 -------------EETSVFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLY 1885
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 31/117 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A+D+D NG + Y + ++ F+I+ ETG + TL LD +
Sbjct: 2830 IQVRASDLDSGMNG-HVMYSLDQSQSVDIIESFAINMETGWITTLKELDHE--------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E++IY I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2880 -----------------ERDIYQIKVVASDHGEKVQLSSTAIVAVTVADVNDSPPRF 2919
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G IQY I G F ID+ETG+++T LDR
Sbjct: 1055 MTVSAHDEDTGRDG-EIQYSIRDGSG-VGVFKIDEETGVLETSDLLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D LS + I +ED+NDN P
Sbjct: 1101 -------------ESMSHYWLTVYAADRAVVPLSSFIEIYIEIEDVNDNAP 1138
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y + + E KF ++ +TG +KTL LDR+
Sbjct: 3044 VQVSATDADIRSNA-EITYTLFGSGAE--KFKVNPDTGELKTLAPLDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A + + +ED+NDN P F
Sbjct: 3090 ---------------EQAVYNLLVRATDGGGRFCQA-NIVLPLEDVNDNAPQF 3126
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 31/119 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI++ +GI++ LDR+
Sbjct: 3147 RVQATDADTGLNR-KISYSLIDS--ANGQFSINEISGIIQLEKPLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+QA +Y V+ A D G P +LS T+ ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQA-----------VYTLVLKAVDQGLPRKLSATGTVVVSVLDINDNPPVFEYREY 3236
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + R D E++ E + V DNGTP S +
Sbjct: 1174 KLMYKITSGNPQGFFSIHPKTGLITTTSRRLDREQQDEHILEVTVTDNGTPPKSTIARVI 1233
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1234 VKILDENDNKPQF 1246
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG I I E + F ID +TG++K L LDR+ TTD
Sbjct: 740 MNSTDLDSGFNGKLIYS--ISGGNEDSCFIIDMDTGMLKILSPLDRE----------TTD 787
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + I + D NDN P F + Y
Sbjct: 788 ---------------KYTLNITVYDLGIPQKAAWRLLDIIILDANDNPPEFLQESY 828
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 642
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ + + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFGEKRYVAQVREDV 549
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 642
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 642
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 642
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
domestica]
Length = 4550
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID TG I+I
Sbjct: 3213 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDATTG-----------------AIFI- 3252
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D D E + Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3253 -------IDHLDYESSHDYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDMY 3303
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++ + KFSID ETGIVK + LDR E+
Sbjct: 843 IQVEAVDKDLGPNG-EVKYYLLT---DTDKFSIDSETGIVKVVGPLDR-------EMQHV 891
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E E +++ TV+ +K+++ED+NDN P F
Sbjct: 892 HFLKIEA--RDQAETEPQLFSTVL--------------LKVSLEDVNDNPPKF 928
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD+D +NG + Y + ++ F+ID ETG + TL LD
Sbjct: 2792 IQVKATDLDSGANG-QVLYSLDQSQSLDVIESFAIDMETGWITTLKELDH---------- 2840
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ + +ITV+A D G QLS ++I+V D+NDN P F
Sbjct: 2841 ---------------EKRDKYHITVVASDYGEKVQLSSTAVVEISVTDVNDNPPRF 2881
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 34/123 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-----FSIDKETGIVKTLYALDRDDPEREK 55
+ V ATD D N G I Y + G +K F ID +G++ + LD ++ +R +
Sbjct: 2265 VHVWATDTDSAPNRG-ISYHLF---GNHSKSPDQYFHIDSSSGLISLVRTLDYEETQRHE 2320
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ V A D+G P LS + + V D+NDN P+FD+
Sbjct: 2321 -------------------------LLVRAVDSGMPPLSSDAIVTVHVTDLNDNPPLFDQ 2355
Query: 116 VQY 118
Y
Sbjct: 2356 PLY 2358
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G +K LDR
Sbjct: 3318 VTVMADDADGPSNS-HIHYSIIDG-NQGNPFTIDPVRGEIKVTQLLDR------------ 3363
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3364 -------------ETISGYTLTVQAADNGSPPRFNTTTVNIDVSDVNDNAPVFSKGNY 3408
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSID+ +GI++ LDR E+
Sbjct: 3109 RVQATDADAGLNH-KISYSLVNS--ADGQFSIDESSGIIRLEKPLDR-------ELQAVY 3158
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3159 NLILKAVDQGLPRR-----------------LTATGTVVVSVLDINDNPPVFEYREY 3198
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 31/121 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y+I+++ + F+ID TG ++T+ +LD +
Sbjct: 1754 LVIRAADADKESNA-LLVYQIVESSAHK-YFAIDSSTGAIRTVLSLDYE----------- 1800
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQ 117
E I+ TV D GTP+L A + I V DIND P+F ++
Sbjct: 1801 ---------------EAPIFQFTVQVHDMGTPRLFAEYAANVTIRVVDINDCPPVFSKML 1845
Query: 118 Y 118
Y
Sbjct: 1846 Y 1846
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 34/115 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D D SN I Y + PG KF I+ +TG +KTL LDR+ ++ +Y
Sbjct: 3006 MQVSAIDADIRSNA-EITYTL-SGPGAE-KFKINADTGELKTLAPLDRE----QQAVY-- 3056
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI--TVEDINDNEPMF 113
++ VQA D G + C M + T+ED+NDN P F
Sbjct: 3057 -NLLVQATD-------------------GGGRF---CQMSVLFTLEDVNDNAPEF 3088
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+E G+++T LDR
Sbjct: 1052 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFKIDEEKGVIETAEKLDR------------ 1097
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I +ED+NDN P
Sbjct: 1098 -------------ETVSHYWLTVFATDQGVVPLSSFTEIYIEIEDVNDNAP 1135
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER--------- 53
V+ATD+D N + I + + F ID ETG++K L LDR+ E+
Sbjct: 740 VNATDLDSGFNSKLV--YAISGGNDDSCFMIDLETGMLKVLSPLDREATEKYTLNITVYD 797
Query: 54 ----EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K + DIRV + + PE +E Y ++ED
Sbjct: 798 LGIPQKASWRLLDIRVLDANDNKPEFLQESYFIEVSED 835
>gi|397470560|ref|XP_003806887.1| PREDICTED: cadherin-related family member 2 isoform 1 [Pan
paniscus]
gi|397470562|ref|XP_003806888.1| PREDICTED: cadherin-related family member 2 isoform 2 [Pan
paniscus]
Length = 1310
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALEGRIVLTVLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 700
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+AT D N I Y+II E KF+I+ TG++ + +LD
Sbjct: 3219 LQVYATSRDIEVNA-EITYKIISG-NEHGKFTINPVTGMIFIIASLDY------------ 3264
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD ++ I V D+NDN P+F + Y
Sbjct: 3265 -------------ETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNTY 3309
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG-ERAK--FSIDKETGIVKTLYALDRDDPEREKEI 57
+QV A D+D SNG + Y + + E K FS+D+ETG V TL LD
Sbjct: 2798 VQVRAFDLDVGSNG-QVSYMLGHSQDLEEIKELFSVDRETGWVTTLGELDH--------- 2847
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ + +I V+A D+G LS + T+++TV D+NDN P F
Sbjct: 2848 ----------------EKTNKYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRF 2887
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y I+ + F+I+ ETG++K + LDR+ T
Sbjct: 811 IQVQAVDKDLGVNG-EVKYSILT---DTDIFTINSETGVIKAVAPLDREKQH-------T 859
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E E PQL +K+TVED+NDN P+F
Sbjct: 860 HLLKIEA--RDQAENE--------------PQLFSHVLLKVTVEDVNDNPPVF 896
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q++A D D N I + +++ G ++ F ID +G+++T LD
Sbjct: 2272 VQINAKDPDSGQNNA-ISFHLVETSGNISQYFHIDASSGLIETAKPLDY----------- 2319
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +E + V A DNG P LS+ ++ I + D+NDN P F
Sbjct: 2320 --------------EYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAF 2359
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++TL +LD Y
Sbjct: 1761 LVIRATDSDQESNA-LLVYQIVE-PSVHKYFAIDSSTGALRTLLSLD----------YEQ 1808
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
T+I + TV D G P+L +A + I V DIND P+F + Y
Sbjct: 1809 TNI---------------FHFTVQVHDMGYPRLFAENAANVTIYVVDINDCAPVFSKDVY 1853
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D P N I+Y I + PG F ID G VK LDR
Sbjct: 3324 LMVVADDADGPLNN-HIRYSITEGNPGN--TFIIDPVRGEVKVNKLLDR----------- 3369
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ AEDNG P + T+ I V D+NDN PMF + Y
Sbjct: 3370 --------------ELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNY 3414
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VHA D D NG I Y I A F+ID +G++ TL LD E IY
Sbjct: 452 FSVHAVDHDEGENG-FITYSI--ANINPQPFAIDAFSGVITTLEDLDY---ELMPRIYT- 504
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
++++A D P RE EI +T IT+ ++NDN P+F++V
Sbjct: 505 --LKIRASDWGLPYRRETEIPVT------------------ITLNNLNDNIPLFEKVN 542
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F+I +E G ++T LDR
Sbjct: 1023 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFTIHEEKGTIRTADNLDR------------ 1068
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I +ED+NDN P
Sbjct: 1069 -------------ETTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAP 1106
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D +G + I + + F++D ETG +K L LDR
Sbjct: 706 IHMEANDLDAGFSGKLL--YAISGGNDDSCFAVDMETGWLKILSPLDR------------ 751
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + + D G PQ S + + V D+NDN P F + Y
Sbjct: 752 -------------ELKDQYNLNITVYDLGIPQKSSWRLLDVNVLDVNDNPPEFLQESY 796
>gi|216548395|ref|NP_001136025.1| protocadherin-23 isoform 3 [Homo sapiens]
Length = 709
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3251 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E Y+TV A D GTP LSD T+ I + DINDN P+F + Y
Sbjct: 3297 -------------ESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSY 3341
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + KF+ID+ TG+VK + LDR E ++ Y+
Sbjct: 843 IQVEATDKDLGPS--GHVTYAILT---DTEKFAIDRVTGVVKIIQPLDR---EVQRVHYL 894
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA + P LS +K++++D+NDN P F
Sbjct: 895 KIEARDQATEE--------------------PWLSSTVLLKVSLDDVNDNPPRF 928
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G +K LDR
Sbjct: 3356 ITIMADDADGPSNS-HILYSIIEG-NQGSPFTIDPVRGEIKVTKPLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3402 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3446
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+ E+ +Y
Sbjct: 3044 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLALLDRE----EQAVY-- 3094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ V A D G S T+ +T+ED+NDN P F
Sbjct: 3095 -------------------HLLVKATDGG--GRSCQATIVLTLEDVNDNTPEF 3126
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++I G +K F ID TG++ + ALD + ++ K
Sbjct: 2304 LQVRATDSDSEPNRG-ISYQLI---GNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V A D G P LS + + V D+NDN P+F++
Sbjct: 2359 ------------------------LLVRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQ 2394
Query: 117 QY 118
Y
Sbjct: 2395 VY 2396
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG + T+ +LD
Sbjct: 1793 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDPTTGAIHTVLSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + + TV D GTP+L +TV DIND P+F + Y
Sbjct: 1839 -------------EETRVFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLY 1885
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFRIDEETGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1138
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D NG + I + + F++D ETG++K L LDR
Sbjct: 738 LFMNATDLDSGFNGKLVY--AISGGNDDSCFTVDMETGMLKVLSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -------------EVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++++GI++ LDR+
Sbjct: 3147 RVQATDADAGLNR-KISYSLLDS--ADGQFSINEQSGILQLEKHLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+QA+ +T+ A D G P +L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQAV----------YTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREY 3236
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A+D+D NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2830 IQVRASDLDSGVNG-QVMYSLDQSQDADIIESFAINMETGWITTLKELDH---------- 2878
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2879 ---------------EERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2919
>gi|119625351|gb|EAX04946.1| dachsous 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 1366
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG + + LD
Sbjct: 3251 LQVYAASRDIEANA-EITYAIISG-NEHGKFSIDSKTGAIFIIENLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E Y+TV A D GTP LSD T+ I + DINDN P+F + Y
Sbjct: 3297 -------------ESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSY 3341
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D PS G + Y I+ + KF+ID+ TG+VK + LDR E ++ Y+
Sbjct: 843 IQVEATDKDLGPS--GHVTYAILT---DTEKFAIDRVTGVVKIIQPLDR---EVQRVHYL 894
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA + P LS +K++++D+NDN P F
Sbjct: 895 KIEARDQATEE--------------------PWLSSTVLLKVSLDDVNDNPPRF 928
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G +K LDR
Sbjct: 3356 ITIMADDADGPSNS-HILYSIIEG-NQGSPFTIDPVRGEIKVTKPLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 3402 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 3446
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + + E KF ++ +TG ++TL LDR+ E+ +Y
Sbjct: 3044 MQVSATDADIRSNA-EITYTLFGSGAE--KFKLNPDTGELRTLALLDRE----EQAVY-- 3094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ V A D G S T+ +T+ED+NDN P F
Sbjct: 3095 -------------------HLLVKATDGG--GRSCQATIVLTLEDVNDNTPEF 3126
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++I G +K F ID TG++ + ALD + ++ K
Sbjct: 2304 LQVRATDSDSEPNRG-ISYQLI---GNHSKSHDHFHIDSHTGLISLVRALDYEQFQQHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V A D G P LS + + V D+NDN P+F++
Sbjct: 2359 ------------------------LLVRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQ 2394
Query: 117 QY 118
Y
Sbjct: 2395 VY 2396
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG + T+ +LD
Sbjct: 1793 LVIRATDADRESNA-LLVYQIVE-PSVHNYFAIDPTTGAIHTVLSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + + TV D GTP+L +TV DIND P+F + Y
Sbjct: 1839 -------------EETRVFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLY 1885
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFRIDEETGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAP 1138
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D NG + I + + F++D ETG++K L LDR
Sbjct: 738 LFMNATDLDSGFNGKLVY--AISGGNDDSCFTVDMETGMLKVLSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + D G PQ + + +TV D NDN P F + Y
Sbjct: 784 -------------EVTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSI++++GI++ LDR+
Sbjct: 3147 RVQATDADAGLNR-KISYSLLDS--ADGQFSINEQSGILQLEKHLDRE------------ 3191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+QA+ +T+ A D G P +L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3192 ---LQAV----------YTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREY 3236
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A+D+D NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2830 IQVRASDLDSGVNG-QVMYSLDQSQDADIIESFAINMETGWITTLKELDH---------- 2878
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2879 ---------------EERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRF 2919
>gi|426351157|ref|XP_004043124.1| PREDICTED: cadherin-related family member 2 [Gorilla gorilla
gorilla]
Length = 1256
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 551 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 599
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 600 -----------DPALEGRIVLTVLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 646
>gi|216548385|ref|NP_001136024.1| protocadherin-23 isoform 2 [Homo sapiens]
Length = 1369
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|397504071|ref|XP_003822632.1| PREDICTED: protocadherin-16-like [Pan paniscus]
Length = 689
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 566 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 603
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 604 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 648
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++A D +N I Y II E KFSID +TG + + LD
Sbjct: 3251 LQLYAASRDIEANA-EITYSIISG-NEHGKFSIDAKTGAIFIIENLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ I V DINDN P F + Y
Sbjct: 3297 -------------ESAHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPAFSQDTY 3341
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SNG + Y I+ + KFSID TG+VK ++ LDR E+
Sbjct: 843 IQVEATDKDLGSNG-HVTYSILT---DTDKFSIDSITGVVKVVHPLDR-------EVQHV 891
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD + E +++ TV+ +K+++ED+NDN P F
Sbjct: 892 HYLKIEA--RDQAKEELQLFSTVL--------------LKVSLEDVNDNPPKF 928
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F ID TG++ L LD + ++ K
Sbjct: 2304 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHIDSTTGLISLLRTLDYEQFQQHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D G P LS + + V D+NDN P+FD+
Sbjct: 2359 ------------------------IFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQ 2394
Query: 117 QY 118
Y
Sbjct: 2395 IY 2396
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y ++ + E KF ++ +TG +KTL LDR+
Sbjct: 3044 MQVSATDADIRSNA-EITYTLLGSGAE--KFRLNPDTGELKTLAPLDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3090 ---------------EQAVYNLLVKATDGGGRFCQA-SIVLTLEDVNDNAPEF 3126
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y I++ P F+ID TG + T+ +LD
Sbjct: 1793 LVIRATDADKESNA-LLVYHIVE-PSVHKYFAIDSSTGAIHTVLSLDY------------ 1838
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
E + TV D GTP+L A + I V DIND P+F + Y
Sbjct: 1839 -------------EETSVFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSLY 1885
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P I Y II+ + F+ID G VK LDR
Sbjct: 3356 ITVMADDADGPLYS-LIHYSIIEG-NQGGPFTIDPVKGEVKVTKLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------ETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPLFSKGNY 3446
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F ID+ETG+++T
Sbjct: 1055 MTVSARDEDTGRDG-EIRYSIRDGSG-VGVFKIDEETGVIETS----------------- 1095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1096 --------DRLDRESTSHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAP 1138
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y +I + +FSI+ +GI++ LDR+ ++ +Y T
Sbjct: 3147 RVQATDADTGLNR-KISYSLIDS--ANGQFSINDISGIIQLEKPLDRE----QQAVYTLT 3199
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++A+D+ P R LS T+ ++V DINDN P+F+ +Y
Sbjct: 3200 ---LKAVDQGLPRR-----------------LSATGTVIVSVLDINDNPPVFEYREY 3236
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 740 MNATDLDSGFNGKLV--YAISGGNEDSCFIIDMETGMLKILSPLDRE----------TTD 787
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + I + D NDN P F + Y
Sbjct: 788 ---------------KYTLNMTVYDLGIPQKAAWRLLDIVILDANDNPPEFLQESY 828
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + R D E++ E + V DNGTP S +
Sbjct: 1174 KLMYKITSGNPQGFFSIHPKTGLITTTSRRLDREQQDEHILEVTVTDNGTPPKSTIARVI 1233
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1234 VKILDENDNKPQF 1246
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 32 SIDKETGIVKTL-------YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84
+ D+++GI + +A DR P +I+ ++ LDR+ P EK I I ++
Sbjct: 2517 ATDRDSGIYGHITYNIVNDFAKDRFYPNERGQIFT-----LEKLDRETPA-EKVISIRLM 2570
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A+D G CT+ + + D NDN P F +Y
Sbjct: 2571 AKDAGGKVA--FCTINVILTDDNDNAPQFRATKY 2602
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+AT D N I Y+II E KF+I+ TG++ + +LD
Sbjct: 3251 LQVYATSRDIEVNA-EITYKIISG-NEHGKFTINPVTGMIFIIASLDY------------ 3296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD ++ I V D+NDN P+F + Y
Sbjct: 3297 -------------ETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNTY 3341
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG-ERAK--FSIDKETGIVKTLYALDRDDPEREKEI 57
+QV A D+D SNG + Y + + E K FS+D+ETG V TL LD
Sbjct: 2830 VQVRAFDLDVGSNG-QVSYMLGHSQDLEEIKELFSVDRETGWVTTLGELDH--------- 2879
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ + +I V+A D+G LS + T+++TV D+NDN P F
Sbjct: 2880 ----------------EKTNKYHIVVVAYDHGDKVLSSSSTIEVTVMDVNDNPPRF 2919
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y I+ + F+I+ ETG++K + LDR+ T
Sbjct: 843 IQVQAVDKDLGVNG-EVKYSILT---DTDIFTINSETGVIKAVAPLDREKQH-------T 891
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E E PQL +K+TVED+NDN P+F
Sbjct: 892 HLLKIEA--RDQAENE--------------PQLFSHVLLKVTVEDVNDNPPVF 928
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q++A D D N I + +++ G ++ F ID +G+++T LD
Sbjct: 2304 VQINAKDPDSGQNNA-ISFHLVETSGNISQYFHIDASSGLIETAKPLDY----------- 2351
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +E + V A DNG P LS+ ++ I + D+NDN P F
Sbjct: 2352 --------------EYFQECTLVVRATDNGIPPLSNDISVHIGLTDLNDNPPAF 2391
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y+I++ P F+ID TG ++TL +LD Y
Sbjct: 1793 LVIRATDSDQESNA-LLVYQIVE-PSVHKYFAIDSSTGALRTLLSLD----------YEQ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
T+I + TV D G P+L +A + I V DIND P+F + Y
Sbjct: 1841 TNI---------------FHFTVQVHDMGYPRLFAENAANVTIYVVDINDCAPVFSKDVY 1885
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D P N I+Y I + PG F ID G VK LDR
Sbjct: 3356 LMVVADDADGPLNN-HIRYSITEGNPGN--TFIIDPVRGEVKVNKLLDR----------- 3401
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+ AEDNG P + T+ I V D+NDN PMF + Y
Sbjct: 3402 --------------ELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNY 3446
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VHA D D NG I Y I A F+ID +G++ TL LD E IY
Sbjct: 484 FSVHAVDHDEGENG-FITYSI--ANINPQPFAIDAFSGVITTLEDLDY---ELMPRIYT- 536
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
++++A D P RE EI +T IT+ ++NDN P+F++V
Sbjct: 537 --LKIRASDWGLPYRRETEIPVT------------------ITLNNLNDNIPLFEKVN 574
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F+I +E G ++T LDR
Sbjct: 1055 MTVSAHDEDTGRDG-EIRYSIRDGSG-VGVFTIHEEKGTIRTADNLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I +ED+NDN P
Sbjct: 1101 -------------ETTSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAP 1138
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D +G + I + + F++D ETG +K L LDR
Sbjct: 738 IHMEANDLDAGFSGKLL--YAISGGNDDSCFAVDMETGWLKILSPLDR------------ 783
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + + D G PQ S + + V D+NDN P F + Y
Sbjct: 784 -------------ELKDQYNLNITVYDLGIPQKSSWRLLDVNVLDVNDNPPEFLQESY 828
>gi|332820516|ref|XP_003310591.1| PREDICTED: protocadherin-16 [Pan troglodytes]
Length = 709
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|38049543|gb|AAR10444.1| protocadherin protein [Homo sapiens]
Length = 702
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 579 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 616
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 617 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 661
>gi|114596466|ref|XP_001134749.1| PREDICTED: protocadherin-16 isoform 1 [Pan troglodytes]
Length = 1382
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
>gi|61162140|dbj|BAD91058.1| At-cadherin [Achaearanea tepidariorum]
Length = 2971
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D NG ++Y I++ P ++ KF +D+ TG ++T DR+
Sbjct: 872 IKVKAIDNDKGHNG-QVRYSIVQQPNQKGTKFIVDEVTGDIRTNKVFDREG--------- 921
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + + +TV A D G P L C+ K+ + DINDN P+FDR +Y
Sbjct: 922 -----------DD---GRFVSVTVKATDRGNPPLEGVCSFKVEITDINDNPPLFDRQEY 966
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G + Y +DR D +R+ I +R+Q LDR++ R + + ++A D+GTP
Sbjct: 1772 QGGKSRVSYTIDRSSDKKRQFRIDQNGVVRIQRTLDREETPRHQ---VKILAIDDGTPPR 1828
Query: 94 SDACTMKITVEDINDNEPMFDR 115
+ T+ + V DINDN P F R
Sbjct: 1829 TATATLTVVVSDINDNAPRFLR 1850
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 22/90 (24%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
+KF+I+ TG EIY+ ++ LDRD P + TV AED
Sbjct: 1451 SKFAINTTTG-----------------EIYV-----LKPLDRDLPHGRSQWRFTVFAEDE 1488
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
G L + + ++DINDN P F Y
Sbjct: 1489 GGNGLVGYADVLVNLKDINDNSPFFPYAIY 1518
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V + +R D E++KE + ++ +D+GTP ++ T+ + + D+NDN
Sbjct: 1917 VTSKERFDREQQKEYLVPIVIKDSGTPSMTGTSTLTVIIGDVNDN 1961
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ +TV E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1141 DYERIQQYNLTVRVENNGIQQLASEATVYIVLEDVNDEIPLF 1182
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 33/124 (26%)
Query: 1 MQVHATDVDPPSNG--GTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + ATD D P+ G ++Y I + GE F+ID+ETG++ T
Sbjct: 1533 MTMTATDYDDPNEGMNARLKYSIEQNQVNENGELI-FTIDEETGVISTA----------- 1580
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR E E I V+A D G L T I ++DIND P F
Sbjct: 1581 ----------VCCLDR---ETNPEYTIKVVAMDGGG--LKGTGTATIKIKDINDMPPEFT 1625
Query: 115 RVQY 118
+ ++
Sbjct: 1626 KKEW 1629
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E KE + ++A DN + T+ I ++D+NDN PMFDR Y
Sbjct: 1359 DYESRKEYKLRLVASDNLN---ENHTTVVIHIKDVNDNPPMFDRPTY 1402
>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
Length = 5078
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D P G ++Y + + G+ F I+ TG ++Y++
Sbjct: 2311 LTVRASDADSPQYNGQVRYFLKE--GDAGLFRINASTG-----------------DLYLS 2351
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E++ E +T++A D GTP LS + T+++ V+D+ND+ P+F+R Y
Sbjct: 2352 -----RPLDR---EKQSEYLLTLVAMDTGTPPLSGSGTVRVIVQDVNDHSPVFERQSY 2401
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 28/108 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N Y II E+A F ID +TG ++T LDR
Sbjct: 3480 DVRPLNN--QFSYSIINGNSEKA-FKIDPQTGAIETAAELDR------------------ 3518
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E+ + + A D G P + T+KI +ED+NDNEP FD
Sbjct: 3519 -------EKIPAYTLIIGAIDTGVPPQTGTATVKIILEDVNDNEPFFD 3559
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD+D NG I YR+I FSID++ G + T LDR
Sbjct: 2737 IKATDLDSEQNG-EISYRLIN--DSDGTFSIDEKNGDIFTEVKLDR-------------- 2779
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E +TV A D+G PQL+ T+ + V D NDN P F R+
Sbjct: 2780 -----------ESIASYTLTVEAFDHGNPQLTSTATVLVNVLDKNDNPPRFTRL 2822
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 60 TTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +RV LDR++ + +T++A D GTP S + ++ I V D+ND+EP+F++ +Y
Sbjct: 437 TPAVRVNGVLDREEISKYN---LTIVATDKGTPPRSSSASLIILVNDVNDHEPVFEKSEY 493
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D I Y + K P + F+ID +G EI+
Sbjct: 2940 QVIATDRDKHGANSVISYSL-KHPSD--IFTIDPASG-----------------EIFSKR 2979
Query: 62 DIRVQ--ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R + AL+ E + +TV+A DNG P +S C + + + D N+N P F + QY
Sbjct: 2980 PLRYKYTALEH---SPENQYTLTVLATDNGKPPMSSECLVTVNIIDSNNNPPKFTKSQY 3035
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 31/117 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD NG ++Y I E FSI ++TG+V+ L+
Sbjct: 2200 LQVSATDVDEGLNG-KVRYSIFSG-DENRDFSISEDTGVVRVAKNLNF------------ 2245
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ----LSDACTMKITVEDINDNEPMF 113
ER+ +TV AED+ D TM I V DINDN P+F
Sbjct: 2246 -------------ERKPRYLLTVRAEDSSNNDDDNIRYDTATMSIIVRDINDNPPVF 2289
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 16 TIQYRIIKAPGERAKF--SIDKETGIVKTL-YALDRDDPEREKEIYITTD-------IRV 65
T+ + APG R + DK+ G L Y + + +++ I IT++ + +
Sbjct: 153 TVMFSESSAPGTRLLLDSAFDKDAGQNGELDYNIVGGNKDQKFRINITSNPSGEMSYLNL 212
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ D E ++ + A+D G P L + +T+ D+NDN PMFD Y
Sbjct: 213 ETTGNLDRETRAFYHLNISAKDGGDPPLYGYLQVNVTILDVNDNPPMFDHSDY 265
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D NG + Y++I FS++ ++G+ LD +
Sbjct: 1887 EIMATDEDEGING-QVSYQVISDWANDV-FSLNSQSGVFTLTTRLDYE------------ 1932
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + YI V+ A+D+G P LS T+ V D+NDN P+FD + Y
Sbjct: 1933 --------------EVQHYIFVVQAQDSGKPSLSSTLTVYFNVIDLNDNAPLFDPMSY 1976
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +T++A D G P+LS +TVED NDN P+F
Sbjct: 1399 DYEELNSYTLTIVASDGGNPRLSSTTLFNVTVEDSNDNSPVF 1440
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V+ATD+D NG Y I E KFSI++ TG + + LDR+ R Y+
Sbjct: 1249 LRVYATDIDEGVNGEV--YYSIAMGNEEQKFSIEQGTGQITLIKDLDRETTSR----YV- 1301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+TVIAED +LS + T+ I + D NDN P F + +
Sbjct: 1302 --------------------LTVIAEDGAVQNKLSVSTTVVIDILDENDNAPEFVQTMF 1340
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 33/120 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRII----KAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
+ V A D D NG + Y I + PG F I+ +TG++ TL +DR
Sbjct: 1460 VTVTAEDPDSGKNG-EVMYSISSQEPETPGHERHFGINPKTGVIYTLLPIDR-------- 1510
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT---VEDINDNEPMF 113
+A+D +TV+A D P+ S K+ VEDINDN P+F
Sbjct: 1511 ---------EAVDT--------FLLTVVATDQACPESSRRSAEKLVTVIVEDINDNAPIF 1553
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A+D D +NG + + +P F++D TG + T LDR+ IT
Sbjct: 617 ASDSDQGTNGSVAYFLDAEFSPKYSGPFALDSLTGQLTTKSYLDRE---------IT--- 664
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P E I VIA+D G P S + + VED+NDN P F ++Y
Sbjct: 665 ---------PYYE----IKVIAKDQGVPPRSSTAVVNLFVEDVNDNSPEFYPLKY 706
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 19/89 (21%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID + G VKTL DR E I T + I + + DNG
Sbjct: 1165 EFIIDPKNGFVKTLIVFDR-------EALIQT------------TGKGFISLEAVVHDNG 1205
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
+L D + + ++D+NDN P+F Y
Sbjct: 1206 QIKLKDKAAVNVFIDDLNDNPPVFLTTPY 1234
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D P NG Y + + F ++K TG++KT +DR
Sbjct: 3578 LTLTATDPDLPPNGAPFNYFLTGGKDKDFVF-VEKTTGVIKTRKVIDR------------ 3624
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ I + EDNG P+L ++ I V D ND+
Sbjct: 3625 -------------EVNPQLEIMISVEDNGVPKLKSQHSVSIIVLDQNDS 3660
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG ++Y+I + E +KF ++ TG +K L LD D
Sbjct: 3157 LTIKATDDDDGPNG-MVEYKI-SSGNEDSKFHLNSTTGALKILKPLDYD----------- 3203
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ V A D G + I++ D+NDN P F++ Y
Sbjct: 3204 --------------TVSNYHLNVTATDLGFEPHQATAMVTISLTDVNDNPPTFNQSVY 3247
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
+ L ++ ER + T I + DDP I +TV D G P L T+ I++
Sbjct: 949 FNLTKNAQERFRINEATGVIYLNRKINDDPGTLIPIEVTVT--DFGKPPLMSKQTVVISI 1006
Query: 104 EDINDNEPMFDRVQY 118
+D+ND+ P+FD Y
Sbjct: 1007 KDVNDHTPVFDHTSY 1021
>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3282
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG I Y I++ + FSID TGI+ TL LD
Sbjct: 492 LQVTARDKDQGPNG-DISYSILQDGSAYYSWFSIDSITGIITTLSQLDY----------- 539
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ITV+A D G P LS + I ++DINDNEP+F+R Y
Sbjct: 540 --------------EKNPSPSITVVATDGGKPSLSSTAVVNIFLQDINDNEPVFERNFY 584
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D NG I Y+I A F +D ++G++ T LDR
Sbjct: 1764 FTLRATDQDAGDNG-RINYKI-TAGDPSGDFRLDGQSGVLSTSRPLDR------------ 1809
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TVIA+D G P LS T+++ V DIND+ P F Y
Sbjct: 1810 -------------EKRPGYSLTVIAQDQGHPPLSSTATVEVIVLDINDHSPQFQSSSY 1854
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI ++ FS++ TG + LDR+
Sbjct: 1558 LYVMARDADQGENG-RVTYRI-QSGNTAGTFSLNPSTGSLSIFKPLDRE----------- 1604
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++I+ +TVIAED+G PQ S + + V D+ND P F++ QY
Sbjct: 1605 ---------------EQDIFNLTVIAEDHGIPQHSSIQLLCVHVIDVNDEVPWFEQSQY 1648
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I YR++ + + F ID G TL+ + +
Sbjct: 2386 ITVTATDRDSGDNG-KITYRVMSS--TKGVFYIDPVNG---TLFTKQKTE---------- 2429
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ++P I + + A D GTP LS T+ + V DINDN P+F + +Y
Sbjct: 2430 -------FDFENPS----ILVVIEARDQGTPSLSAIATVHVQVSDINDNAPIFHQSEY 2476
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D SNG + Y I G FSI+ +G++ +LDR
Sbjct: 1663 LTVSAADLDQGSNG-QVTYDGISQEG----FSINPVSGVIMITKSLDR------------ 1705
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ +TV A+D G P T++I V D+NDN P+F R+ Y
Sbjct: 1706 -------------ELQEYYTVTVSAKDGGLPPNYAKATVRIKVTDVNDNPPVFGRLYY 1750
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + Y I ++ F ID TG V T +DR EI+
Sbjct: 2181 IQVAADDRDQGQNG-QVTYSI-RSSSMSGLFKIDPLTGSVTTAAIMDR-------EIWTQ 2231
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
T + V A DR GTP+L+ + T+ + + D+NDN PM
Sbjct: 2232 TKLVVTATDR------------------GTPRLAGSATLTVIIIDLNDNSPM 2265
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 23/119 (19%)
Query: 23 KAPGERAKFSIDKETGIVKTLY---ALDRDDPEREKEIYITTDIRV-QALDRD------- 71
K P ++A F I ++T I A+D D + + Y+ D V QA +
Sbjct: 142 KFPRKQATFKIPEQTAIGTRFPLEPAVDSDKGQLTTQGYLIKDGNVGQAFTLETRRGSNE 201
Query: 72 ------------DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ +++ A D G+P+ +D T+ ITV+DINDN P+F++ +Y
Sbjct: 202 VLYLDLVVNTILDREKRSTYTLSLEAFDGGSPKRTDQMTLDITVQDINDNAPVFNQSRY 260
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIY-ITTDIRVQALDRDDPEREKEIY-ITV 83
GE A ++ E G K +AL D IY I D Q LDR+ E++ Y + V
Sbjct: 396 GEYANVNVSLEGGDGK--FALTTKD----SIIYLICVD---QILDRE----ERDTYELRV 442
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+GTP L + I V DINDN P+FD+ Y
Sbjct: 443 MATDSGTPPLRAESSFTIQVIDINDNPPLFDQPVY 477
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+ D G PQ S + + I+V D NDN P+F R +Y
Sbjct: 2556 LTVVVSDRGIPQRSSSVPIIISVTDANDNPPVFSRTEY 2593
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 29/116 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D NG YR + +R F I+ TG + T LDR
Sbjct: 1131 HVLATDRDSGPNGRP-AYRFLHP--DR-HFQINTHTGEISTRMTLDR------------- 1173
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ + V+A+D G+P S T ITV D NDN+P+F Q
Sbjct: 1174 ------------EQQSSYQLVVVAQDGGSPPRSATGTAFITVLDENDNDPVFIHSQ 1217
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D NG + + + + G + FS+++ +G ++ + +L ++ R
Sbjct: 916 RVQAEDRDSGVNG-QLTFDLSSSNGLQRIFSVERSSGEIRLVGSLSYENTPRYD------ 968
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VI +D+G PQLS T+ + V+ ND P+FD + Y
Sbjct: 969 -------------------LQVITKDSGVPQLSATFTLVVHVQAENDQGPVFDTLTY 1006
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D S G I Y + ++F+I KETG + T ALDRD
Sbjct: 599 LEVTAADADSGSFG-LITYSLGSGINSAVPSQFTIGKETGQICTTAALDRD--------- 648
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ TV A D G LS +++ + DINDN P F + Y
Sbjct: 649 ---------------QGPASFDFTVTAVDGG--GLSSVAYVRVDLVDINDNRPAFYPLSY 691
>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
Length = 4457
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD S+G + ++++++ R F ID +TG++ T+ ALDR+D
Sbjct: 1150 IQVSATDVDTSSDG-KLSFQMLES--HRLHFDIDPKTGVISTVSALDRED---------- 1196
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
PE I VI DNG+P LS T+ I V D NDN P F
Sbjct: 1197 -----------KPEHS----IEVIVSDNGSPALSSTATVVIQVLDANDNPPKF 1234
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D P N ++Y I+ + +FSID +G + ALDR
Sbjct: 3339 MKVTATDEDGPVNN-LLRYSIVSGDLLQ-QFSIDARSGDITVRTALDR------------ 3384
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+P LS A + +TV D+NDN P+F +V +
Sbjct: 3385 -------------EEIPHYSLTVQAADEGSPPLSSAVLVAVTVTDVNDNPPVFSQVNH 3429
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 27/102 (26%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I YRII E +F +D +TG+V + LD E
Sbjct: 3250 IVYRIISG-NEDGRFQLDSQTGLVTLVAPLDF-------------------------EVS 3283
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E Y++V +P LSD T+ I V D+NDN P+F R Y
Sbjct: 3284 REYYLSVEGSRGKSP-LSDITTVIINVTDVNDNPPVFGRSDY 3324
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A+D D N + ++++K G+ + F I+ +TG++ T LD
Sbjct: 2282 IELSASDKDSGRNK-DLTFQMVKTHGDESDFFEINPQTGLIVTKQVLDY----------- 2329
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K + + A DNGT LS + I V D+NDN P FD +Y
Sbjct: 2330 --------------ESRKHFNLKIKATDNGTIPLSSETFVTINVTDVNDNPPDFDSSRY 2374
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q ATD D N + I + E FSID +G ++ + LDR+ KE YI
Sbjct: 728 VQFKATDNDSGFNSKLVY--AISSGNEDGCFSIDTFSGDLRLVCPLDRE----SKEFYI- 780
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I V D+NDN P+FD+ +Y
Sbjct: 781 --------------------LNITVYDLGIPQTSAWKFIAINVMDVNDNPPVFDQPRY 818
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 29/110 (26%)
Query: 11 PSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
P +G G++ Y II + KF+I K+ IV T Q L
Sbjct: 2500 PDDGPYGSVDYTIINKLADE-KFAISKDGLIVTT-----------------------QPL 2535
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DR++P ++ I I V+A+D G CT+KI + D NDN P F +Y
Sbjct: 2536 DRENPS-QRVIAIKVMAKDGGGK--VAFCTVKIILTDENDNVPQFKASEY 2582
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 26/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G ++YRI G F+ID+ETG+++ LDR E
Sbjct: 1058 GVVRYRIHDGSG-LGVFTIDEETGVIRMTEMLDR-------------------------E 1091
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D GT L + I V D+NDN P + Y
Sbjct: 1092 TAPHYWLSVYATDLGTEPLITWTHVFIEVLDVNDNAPELSQPMY 1135
>gi|119625347|gb|EAX04942.1| dachsous 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 3371
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P N G++Q +++ F+ID E+G + T+ LDR
Sbjct: 586 PCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDR---------------------- 623
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + V+A+D G P LS C + ITV+D+NDNEP+F R Y
Sbjct: 624 ---EVQEAVELKVVAQDLGEPPLSATCLVSITVDDVNDNEPIFWRQVY 668
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 2262 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY-------ELTSS 2312
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 2313 YSLIVQATDK------------------GMPRLSNTTVIKVQVTDINDNAPAF 2347
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T LD
Sbjct: 1640 HITAHDPDEGRNGKVTYSILSG-NENMTFMLDESSGLLTTTCPLDY-------------- 1684
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ +TV D+ND P+F + Y
Sbjct: 1685 -----------EMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLY 1729
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2618 VLLHSLDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2670
>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos
saltator]
Length = 3166
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N I Y + GE+A +FSI+ +TG + T ALDR
Sbjct: 829 VSATDSDVGKNA-QITYSLATDSGEQAVNEFSINSQTGAITTTRALDR------------ 875
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 876 -------------ELVSSYLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQY 920
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y ++ G+ A F+ID TGIV+T +LDR+ R
Sbjct: 935 LRVAATDADSDLNG-RVKY-ALEDDGDGA-FAIDPTTGIVRTAKSLDRESVARYS----- 986
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ +A D G+P LS M I +EDIND+ P F+
Sbjct: 987 --------------------LKAVAIDRGSPALSSVVPMIIKIEDINDSPPAFE 1020
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ + + T+IA D+G S + T+ +TV D+NDN+P F+ Y
Sbjct: 657 KQLDREQCSKYSKYQFTIIAADSGEEAKSMSATVILTVTDVNDNDPYFEPKNY 709
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D SN ++Y II + FSID +G V + LD
Sbjct: 506 RIRATDADAGSNAA-VRYAIIGGNTQNT-FSIDSMSGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRF 590
>gi|357623110|gb|EHJ74394.1| dachsous [Danaus plexippus]
Length = 463
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D N I+Y I+ +P + FSID+ +G+V T
Sbjct: 346 LQVSAFDADEGENS-EIRYSILPSP-QSDWFSIDERSGLV-------------------T 384
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +RV D E +TV+A D G P LS T+ +TV D+NDNEP+FD+ Y
Sbjct: 385 TRVRV------DCETNPMPKLTVVASDRGNPPLSSTATLLVTVLDVNDNEPIFDQSFY 436
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
RE++ + D+++ LDR E + + A D GTP L T+ IT+ D+NDN
Sbjct: 49 HRERDGVLYLDLQINGFLDR---ETTDHYELVIEALDGGTPPLRGTMTVNITILDVNDNP 105
Query: 111 PMFDRVQY 118
P+F Y
Sbjct: 106 PVFAESAY 113
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D G+P L + + + V DINDN P F +Y
Sbjct: 285 DRESQSAYTLNVVATDKGSPPLHASRIITLLVTDINDNPPTFLESEY 331
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 31 FSIDK---ETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAE 86
F+ID E G+++ Y+++R +R+ I D +++ KE++ + V+A
Sbjct: 131 FAIDSDEGENGVIE--YSINRRQSDRDNMFKINPDTGEIIVNKLLDFETKELHELVVVAR 188
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D G L + I V D+NDN+P D +
Sbjct: 189 DKGAQPLETTAFVSIRVTDVNDNQPTIDVI 218
>gi|119605474|gb|EAW85068.1| protocadherin LKC, isoform CRA_c [Homo sapiens]
Length = 1290
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 607 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 656 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 702
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3
[Cricetulus griseus]
Length = 3288
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 311 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 365
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ Y
Sbjct: 366 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHY 404
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 947 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1000
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1001 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1033
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R++ F ID +G++ T +DR+ E +
Sbjct: 419 LQLRATDGDAPPNA-NLRYRFVGSPAARSEAAAAFEIDPRSGLISTSGRVDREHMESYEL 477
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ TPQ S+ + ED+
Sbjct: 478 VVEASDQGQEPGPRSATVR---VHITVLDENDNTPQFSEKRYVAQVREDV 524
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 531 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 577 -------------EAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 617
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 681 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 727
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 886 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 932
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 266 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 320
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ Y
Sbjct: 321 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHY 359
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 902 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 955
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 956 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 988
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R++ F ID +G++ T +DR+ E +
Sbjct: 374 LQLRATDGDAPPNA-NLRYRFVGSPAARSEAAAAFEIDPRSGLISTSGRVDREHMESYEL 432
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ TPQ S+ + ED+
Sbjct: 433 VVEASDQGQEPGPRSATVR---VHITVLDENDNTPQFSEKRYVAQVREDV 479
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 486 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 531
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 532 -------------EAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 572
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 636 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 682
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 841 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 887
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA D + G I Y II ER F +D +TG V + LD
Sbjct: 3248 LRVHAASRDTEA-GTEITYAIING-NERGAFRVDPQTGGVFVIEPLDY------------ 3293
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E E Y+TV A D GTP LSD T+ I + D+NDN P+F++
Sbjct: 3294 -------------ETAHEFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQ 3335
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y ++ PG FSID ETG +KTL LDR++ E K
Sbjct: 3041 LQVSATDADIRSNA-QISYELL-GPGSE-HFSIDSETGELKTLLPLDREEEEVHK----- 3092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++V+ALD E E+ +ITVED+NDN P F
Sbjct: 3093 --MKVRALDGGGRFCEAEV--------------------EITVEDVNDNPPQF 3123
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PS+ +++ II + + F+ID G VK LDR
Sbjct: 3353 LTVMADDADGPSSN-QVRFSIIDG-NQGSPFTIDPVRGEVKVARLLDR------------ 3398
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV+A DNG P S + T+ + V DINDN P+F + Y
Sbjct: 3399 -------------EKTSGYTLTVLASDNGGPARSSSATINVDVSDINDNPPIFSQANY 3443
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+++A+D+D +N I Y ++ + FSI++ETG+V+ LDR E+
Sbjct: 3144 RLYASDLDTGANA-EIMYSLLDS--ADGVFSIEEETGVVRLDRPLDR-------ELQSLY 3193
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R QA DR P LS + +++ DINDN P+F+R +Y
Sbjct: 3194 TLRAQATDRGSPR-----------------HLSSQTLLSVSILDINDNPPVFERREY 3233
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y I+ + +F+ID ETGIV LDR+ + +++
Sbjct: 839 IQVEAKDKDLGDNG-VVRYSIL---ADTDQFAIDTETGIVTVKKPLDRE----VQPVFV- 889
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++ A D+ E PQL +KIT+ED+NDN P F
Sbjct: 890 --LKIAARDQATAE----------------PQLVSTVLLKITLEDVNDNPPKF 924
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D N + Y+I++ + FSID++TG + T LD ++ +
Sbjct: 2300 LEVSATDADT-GNNKVLFYQIVEDKDKSFDYFSIDRDTGTIWTTRMLDHEEKPSHR---- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G P LS + I V D+NDN P+F + Y
Sbjct: 2355 ---------------------LLIRAVDGGVPALSSEVMVLIDVMDLNDNTPVFSQNVY 2392
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D G + Y I+ + KFSI E G + TL +LDR++
Sbjct: 2510 EAQATD-DDSGTYGRLTYHIVNDIA-KDKFSI-SENGEIFTLESLDREN----------- 2555
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
AL EK I I++IA+D G CT+ + + DINDN P F Y
Sbjct: 2556 -----AL-------EKVIPISLIAKDGGGK--VGFCTVNVILTDINDNAPQFRAADY 2598
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 33/116 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ H DV P S ++Y +I + G+ KF +DK +G V+ + LD + +K++Y
Sbjct: 946 LEAHDPDVGPSSQ---VRYSLIDS-GD-GKFEVDKLSGAVRIVQNLDYE----KKQVY-- 994
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDN--EPMF 113
+T A+D G P LS +C +++ V D+N+N P+F
Sbjct: 995 -------------------SLTAKAKDKGKPISLSSSCHIEVEVVDVNENLYRPLF 1031
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M++ A D D +G I+Y I G F+ID++TG+++T LD
Sbjct: 1051 MKITAQDEDKGRDG-EIRYSIRDGSG-LGIFTIDEDTGVIRTQELLDH------------ 1096
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V+D+NDN P
Sbjct: 1097 -------------ETVPHYWLTVYATDRGVVPLSSFVEVYIEVQDVNDNAP 1134
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID +TG+++T ALDR+ ER
Sbjct: 342 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQTGLIRTAAALDRESMERH---- 396
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 397 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 435
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 978 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1031
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1032 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1064
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 562 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 607
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 608 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 648
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P R F ID +G++ T +DR+ E +
Sbjct: 450 LQLRATDGDAPPNA-NLRYRFVGPPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 508
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 509 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 555
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 712 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 758
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 917 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 963
>gi|321476878|gb|EFX87838.1| hypothetical protein DAPPUDRAFT_311854 [Daphnia pulex]
Length = 3133
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG ++Y ++ A + F++D +GI++T LDR E+
Sbjct: 956 LQVTATDADQGFNG-RVRYVLLDADTNDSPFTLDATSGILRTNKLLDR-------ELVAK 1007
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D+ VQA+DR GTP+LS A ++ + ++D+ND+ P F+
Sbjct: 1008 YDLLVQAIDR------------------GTPELSGAASVSVIIDDVNDSPPSFN 1043
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + LDR ER +T+ A DNG P LSD ++I++ D+NDN P+F + Y
Sbjct: 889 ITTKQLDR---ERTSGYLLTITARDNGNPPLSDTTDVEISLGDVNDNLPVFQQTMY 941
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D +N + Y I+ G F ID +TG++ T ALDR E
Sbjct: 431 LTVRAKDQDAGANA-DVHYSIVNPFGANEAFRIDAKTGVISTRLALDR-------ETNGQ 482
Query: 61 TDIRVQALDRDDPEREKE-----IYITVIAEDNGTPQLSDACTMKITVEDINDNE-PMFD 114
++ +QA+D+ P +E++ +++ V E++ PQ S+ E++N E P+
Sbjct: 483 YNLTIQAVDQ-GPVQERQSATAMVHVQVGDENDNYPQFSERTYTVDVAENVNWAENPIVA 541
Query: 115 RVQ 117
R++
Sbjct: 542 RIR 544
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD-----------IRV 65
I YRI + ++ F ID +TG + T+ LDR++ + + TD +++
Sbjct: 661 ISYRI-QMDEDQLPFGIDPDTGWIVTVRDLDREENHHHEFEVLATDGGGKTATARVVLQI 719
Query: 66 QALDRDDPEREKEIYITVIAEDN--GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q + +DP ++Y ++ ED GTP L+ +T D ++N R+QY
Sbjct: 720 QDQNDNDPVFWPKVYDAIVGEDATPGTPVLT------VTAADRDENP----RLQY 764
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 9 DPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
+PP G + Y ++ R++ F+ID +TG + T LDR+ + +RV
Sbjct: 327 NPPPIG--VTYSMVAVLDARSQKLFAIDGQTGSITTSARLDRESMDVHY-------LRVT 377
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A + V+A D + S T++I VED ND P F++ Y
Sbjct: 378 ATE-------------VMAGDGRSQPRSATATVQINVEDRNDFAPTFEQPSY 416
>gi|13537202|dbj|BAB40777.1| protocadherin LKC [Homo sapiens]
Length = 1310
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDRE----------- 651
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 652 ---------AIDPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 700
>gi|120660008|gb|AAI30283.1| PCDH24 protein [Homo sapiens]
gi|189054681|dbj|BAG37531.1| unnamed protein product [Homo sapiens]
Length = 1310
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 700
>gi|148709212|gb|EDL41158.1| mCG131495 [Mus musculus]
Length = 1247
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P + FS+D TG+++ L LDR+
Sbjct: 610 DDQPDTNNSLLVFSLLPGP-YSSNFSLDPNTGLLRNLGPLDREAI--------------- 653
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TVI D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----DPALEGRIVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQSSY 700
>gi|119605475|gb|EAW85069.1| protocadherin LKC, isoform CRA_d [Homo sapiens]
Length = 1312
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 607 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 656 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 702
>gi|285002214|ref|NP_001165447.1| cadherin-related family member 2 precursor [Homo sapiens]
gi|285002216|ref|NP_060145.3| cadherin-related family member 2 precursor [Homo sapiens]
gi|209572658|sp|Q9BYE9.2|CDHR2_HUMAN RecName: Full=Cadherin-related family member 2; AltName:
Full=Protocadherin LKC; Short=PC-LKC; AltName:
Full=Protocadherin-24; Flags: Precursor
Length = 1310
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 700
>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3281
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI +A +FS++ +TG + L +LDR+
Sbjct: 1546 LYVMARDSDEGENG-RVSYRI-QAGNSAGRFSLNPDTGSLSILKSLDRE----------- 1592
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ +T++AED+GTPQLS + + + V D+ND P+F R ++
Sbjct: 1593 ---------------EQEVFNLTIVAEDHGTPQLSTSQVLCVQVIDVNDEAPVFLRAEF 1636
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG ++Y ++K + FSID TGI+ T ALD
Sbjct: 465 LQVTARDKDQGPNG-DVRYSLLKGKNSHSDWFSIDPVTGIITTATALDF----------- 512
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D+G P LS + I ++D+NDN P+F Y
Sbjct: 513 --------------ESEPAPSVTVVAMDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFY 557
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V ATD D S G TI Y + + G +F+I+KETG + T ALDRD
Sbjct: 572 LEVSATDEDRGSFG-TISYNLGSSSGNTLPTQFTINKETGQLCTSTALDRD--------- 621
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV A D G LS +++TV DINDN P+F V Y
Sbjct: 622 ---------------EGQDKFDLTVTATDGG--GLSSVARVRVTVVDINDNRPIFYPVLY 664
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 29/112 (25%)
Query: 9 DPPSN-GGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DP S GG ++YRI A G+ F + TG + T LDR
Sbjct: 1758 DPDSGPGGELEYRI--AAGDPDGDFQLHASTGALSTSRGLDR------------------ 1797
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A D G+P LS T+++ V D+NDN P+F + Y
Sbjct: 1798 -------ETHAKYTLEVVATDRGSPALSATVTVEVNVLDVNDNNPVFSKSSY 1842
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 77 KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +Y +TV+ D G PQ S + IT+ D+NDN P F R +Y
Sbjct: 2537 KSLYNLTVVVSDRGVPQRSSSVAAVITIGDVNDNPPAFTRAEY 2579
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIY-ITV 83
GE A ++ E G K +AL D IY+ I V Q LDR+ E++ Y + V
Sbjct: 369 GEYANVNVSLEGGDGK--FALTTKD----SIIYL---IYVDQVLDRE----ERDSYDLRV 415
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 416 MATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAY 450
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I Y+++ + E F ID G TL+
Sbjct: 2372 ITVTATDRDSGENG-RITYKVMSSTKE--GFYIDPGNG---TLF---------------- 2409
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ RV+ DPER + I + A D G P LS T+++ + D+NDN P+F + +Y
Sbjct: 2410 INHRVEF----DPER-PSVSIVIEARDRGLPPLSSFTTVQVQISDVNDNAPVFHQSEY 2462
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A DVD NG + Y I ++ F ID TG + T +DR EI+
Sbjct: 2167 IQVVAEDVDQGQNG-QVTYSI-QSSSMSGLFKIDPVTGSITTAAIMDR-------EIFTQ 2217
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A DR G+P+L+ + T+ + + D NDN P
Sbjct: 2218 TKLVVTATDR------------------GSPRLAGSATLTVIIVDQNDNSP 2250
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + YR++ +R F I+ +TG + T ALDR
Sbjct: 1115 RVSATDRDAGLNA-RLTYRLLHT--DR-HFQINSQTGEISTRLALDR------------- 1157
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V+ +D GTP S T ITV D ND+ P F
Sbjct: 1158 ------------EQQSSYQVIVVVQDGGTPPRSATGTAHITVLDENDHAPSF 1197
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 74 EREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK T++ E D G+P+ + T+++TV DIND+ P+F++ +Y
Sbjct: 187 DREKRSSYTLVIEAFDGGSPRKMGSMTLEVTVTDINDHAPVFNQSRY 233
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D SNG I Y + G F I+ TG + T LD
Sbjct: 1651 LTVTATDRDQGSNG-QITYGGVSEEG----FIINPVTGTITTTKELDT------------ 1693
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A D G P +++ V+D+NDN P+F + Y
Sbjct: 1694 -------------ELQDHYTLTVYARDGGLPPNFAKTVVRVAVQDVNDNAPIFAKPFY 1738
>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
Length = 4186
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 415 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 469
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 470 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 508
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 1051 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1098
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1099 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1137
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 635 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 681 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 721
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 523 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 581
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 582 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 628
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 785 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 831
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 990 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 1036
>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Pan paniscus]
Length = 4186
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 415 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 469
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 470 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 508
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 1051 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1098
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1099 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1137
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 635 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 681 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 721
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 523 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 581
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 582 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 628
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 785 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 831
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 990 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 1036
>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
Length = 4614
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA D +NG I Y II E FS+D +TG V + LD
Sbjct: 3252 LRVHAASRDADANG-EITYSIISG-NEHGMFSVDPKTGDVFVIEPLDY------------ 3297
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E YIT+ A D G+P LSD T+ I + D+NDN P+F + Y
Sbjct: 3298 -------------EASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVY 3342
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D P+ ++Y I+ A + + F+ID G +K LDR
Sbjct: 3357 MAVMAEDFDGPAYN-HVRYSIV-AGNQGSPFTIDPVRGELKVARQLDR------------ 3402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER +TV+A DNG P LS + + I + DINDN P+F + Y
Sbjct: 3403 -------------ERTSGYTLTVVASDNGAPPLSSSAMINIDISDINDNPPLFSQANY 3447
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D+D N + + A G FS+D+ TG++ LDR E+
Sbjct: 3149 KLSANDLDTGLNSDILYSLVESADG---FFSVDESTGVITLERPLDR-------EVQSVY 3198
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ +A D G+P+LS C + I+V DINDN P+F+ +Y
Sbjct: 3199 ELKARA------------------SDQGSPRLSSLCQVVISVLDINDNPPVFEHREY 3237
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + +++++ G+ + F+ID+ TGI+ T LD ++ ++ K
Sbjct: 2304 LQVDAKDSDT-GNNQEVFFQLVEERGKSSDYFTIDRNTGIISTAQVLDHEEIQQHK---- 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV+ +D G P LS + I V D+NDN P+F Y
Sbjct: 2359 ---LRVRVVD------------------GGVPALSSDIIVTIDVTDLNDNAPVFTEHTY 2396
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV +TD D NG ++Y I+ G F+I++ TG+V LDR E++
Sbjct: 841 IQVDSTDKDQGDNG-IVKYSIL---GGTDHFAINENTGVVTVTKPLDR-------ELHPF 889
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++ A D+ E PQL +KIT+ED+NDN P F
Sbjct: 890 YVLKISARDQAVNE----------------PQLVSTVPLKITLEDVNDNPPKF 926
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 26/97 (26%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G I+Y I G FSID+ETGI++T LDR E
Sbjct: 1066 GEIRYSIRDGSG-LGVFSIDEETGIIRTQELLDR-------------------------E 1099
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
++TV A D G LS + I V+D+NDN P
Sbjct: 1100 TTSHYWLTVYAMDRGVVPLSAFVEVYIEVQDVNDNAP 1136
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 38/121 (31%)
Query: 1 MQVHATDVDPPSNGGTIQYRII-------KAPGERAKFSIDKETGIVKTLYALDRDDPER 53
+QV A D D +NG RII +P F+++ ETG V TL LDR+ ++
Sbjct: 2830 IQVKAIDQDSGTNG-----RIIYSLDPKQNSPEIPELFAVNSETGWVTTLKELDREKTDK 2884
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPM 112
K I+++A D G QL T+++TV D+NDN P
Sbjct: 2885 YK-------------------------ISILATDQGEKVQLITGTTVEVTVGDVNDNPPR 2919
Query: 113 F 113
F
Sbjct: 2920 F 2920
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 26/116 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD+D NG + Y I + F ID +G++ T LD E IY
Sbjct: 482 VTVKATDLDKGENG-YVTYSITNVSPQ--PFVIDYFSGVISTSEVLDY---ELMPRIY-- 533
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+++V+A D P R +E+ +VI IT+ ++NDN+P+F+ V
Sbjct: 534 -NLKVRASDWGSPYR-REVEASVI----------------ITLNNLNDNKPLFENV 571
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 29/118 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D N I Y+I++ P F+ID TG ++ LD
Sbjct: 1795 IHATDADCDQNAMLI-YQIVE-PFAHNYFAIDSSTGAIRITSPLDY-------------- 1838
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI--NDNEPMFDRVQY 118
E+ TV D G P+L T +T+E I ND P+ + QY
Sbjct: 1839 -----------EQRSVFRFTVQVHDLGMPRLFAETTANVTIEVIDVNDCAPVLSQEQY 1885
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y + E F ID TG +KT LDR+ EK+ Y
Sbjct: 3046 LQVSATDADIRSNA-QISYELQGVGSEL--FIIDFVTGELKTSQPLDRE----EKDEY-- 3096
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+V+A+D E +I+I V ED+NDN P F Y
Sbjct: 3097 -SFKVRAVDGGGRYCESDIHIIV--------------------EDVNDNPPQFSSDPY 3133
>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
Length = 3237
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRD-DPEREKEIY 58
+QV A D D NG +QY I++ G + FS+D TG+V TL LD + DP
Sbjct: 450 VQVTARDKDQGPNG-DVQYSILQNEGTHSDWFSVDAVTGVVTTLTQLDYEIDPTPS---- 504
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ITV+A D G P LS +K+ ++DINDNEP+F Y
Sbjct: 505 ----------------------ITVVASDRGRPPLSSTAVVKVILQDINDNEPVFGSKFY 542
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG + YRI ++ R KFSI+ +TG + L +DR+
Sbjct: 1522 VMAVDADQGENG-RVTYRI-QSGNVRGKFSINPDTGSLSILRPIDRE------------- 1566
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++Y +T++AED+G Q S + + + V D+ND P F QY
Sbjct: 1567 -------------EEDLYNLTIVAEDHGLQQRSSSQLLSVQVIDVNDEAPYFQESQY 1610
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D + G + YRI F +DK+ G++ T ALDR
Sbjct: 1726 FTIRATDQDS-GDSGLVYYRITDG-DHFGDFHLDKKLGVLSTSRALDR------------ 1771
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + +TV A+D G P L+ T+ I+V D+NDN P+F
Sbjct: 1772 -------------ESRAKYTLTVEAQDQGIPSLTSTVTLDISVLDLNDNSPVF 1811
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D+D +NG + Y I FSI TG++ T ALDR
Sbjct: 1625 LVVSASDMDQGTNG-IVTYGSIVGD----DFSIHPVTGVITTTKALDR------------ 1667
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A D G+P T+++TV D NDN P F RV Y
Sbjct: 1668 -------------EAQGVYALTVYARDGGSPPNFAKTTVRVTVLDENDNRPAFGRVYY 1712
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG + Y I ++ F ID TG + T +DR EI+
Sbjct: 2143 IQVLANDLDQGQNG-QVTYSI-RSSSMSGLFKIDPITGSISTAAIMDR-------EIWTQ 2193
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T++ + A DR G+P+L+ + T+ + + D+NDN P
Sbjct: 2194 TNLVIMATDR------------------GSPRLAGSATLTVIIVDLNDNSP 2226
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I YR++ + F ID G TL+ +KE+
Sbjct: 2348 ITVTATDKDSGENG-RITYRVVST---KDMFYIDPSNG---TLFI--------KKEV--- 2389
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D P I + + A D+GTP L+ T+++ V D+NDN P+F + +Y
Sbjct: 2390 ------EFDSQRPS----ILVVIEASDSGTPPLTALSTVQVHVSDVNDNAPVFHQTEY 2437
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D NG + YR++ +R F I+ TG + T +LDR
Sbjct: 1092 RVSASDRDAGLNG-RLSYRLLHL--DR-HFQINSHTGEISTKLSLDR------------- 1134
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E + + V+A+D GTP S T ITV D NDN P F Q
Sbjct: 1135 ------------ELQSSYQLIVVAQDGGTPPRSATGTAFITVLDENDNAPSFSNAQ 1178
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
M+V ATD D S G +I Y + G ++F++DK G + T +LDRD +
Sbjct: 557 MEVTATDADGGSFG-SISYSLGSGQGSVTPSQFTVDKHNGQICTTTSLDRDQGPANYDF- 614
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TV A D G LS +++ + DINDN+P F V Y
Sbjct: 615 -----------------------TVTAVDGG--GLSSVAYVRVDLIDINDNQPAFYPVSY 649
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIY-ITTDIRVQALDRDDPEREKEIYITVI 84
GE A ++ E G K +AL D IY I D Q LDR E + + V+
Sbjct: 354 GEYANVNVSLEGGNGK--FALTTKD----SIIYLICVD---QILDR---EEQDHYELRVM 401
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D+GTP L + I V D+NDN P+FD+ +Y
Sbjct: 402 ATDSGTPPLRAESSFTIQVIDVNDNPPLFDQQEY 435
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 15 GTIQYRII---KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
GT+ Y++ + G S D T +++DR+ + + + + + R
Sbjct: 869 GTVVYKVQAEDRDSGPNGLLSFDLFTSSAHRTFSIDRN----SGHLRLIGSLSYETMPRY 924
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D + VIA+D+G PQLS T+ I V+ N P+FD + Y
Sbjct: 925 D--------LQVIAKDSGAPQLSSTFTLVIHVQAENGQGPVFDSLTY 963
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ D E +T++ D G PQ S + + I V D NDN P F R +Y
Sbjct: 2505 DKLDFEIASSYNLTIVVSDRGIPQRSSSVPVLINVMDTNDNPPSFSRAEY 2554
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 25 PGERAKFSIDKETGIVKTLY---ALDRDDPEREKEIYITTDIRVQALDRDDPER--EKEI 79
P +RA F I ++T I A+D D+ + + YI TD V + +R K +
Sbjct: 102 PRKRATFKIPEQTTIGTKFPLEPAVDADEDQLTTQGYIITDGNVGQAFLLETKRGSNKVL 161
Query: 80 YITVI------------------AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ ++ A D G+P+ + + + V+DINDN P+F++ +Y
Sbjct: 162 YLDLVVNAVLDRETRSSYTLLLEAFDGGSPKRTGQMILDVIVQDINDNAPVFNQSRY 218
>gi|324499643|gb|ADY39852.1| Protein dachsous [Ascaris suum]
Length = 2824
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 27/105 (25%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
D N G + + I+ A E FSI+K TGI I + L
Sbjct: 1670 DDEGNDGLVDFNIV-AGNENNVFSINKSTGI-----------------------ISCRQL 1705
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
DR E++ E ++ + AED+G P +D CT++ITV D NDN P+F
Sbjct: 1706 DR---EQKSEYFLVITAEDHGVPARADTCTIRITVADDNDNAPLF 1747
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
ALDR E + + ++T+IA D+G P LS T+ I + DINDN P
Sbjct: 1008 ALDR---EIQADYHLTLIATDSGKPSLSSNATLHINILDINDNSP 1049
>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Nomascus leucogenys]
Length = 4067
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 415 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 469
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 470 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 508
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 1000 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1047
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L +++ V+D+NDN P+F
Sbjct: 1048 ---------------AVSVYELTAYAVDRGVPPLRTPVNIQVMVQDVNDNAPVF 1086
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 635 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 681 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 721
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 523 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 581
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 582 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 628
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 939 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 985
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI ++ +FS+ TG + L ALDR+
Sbjct: 1563 LHVMAHDADEGENG-RVSYRI-QSGNNAGRFSLSPNTGSLSILKALDRE----------- 1609
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ +T++AED+G PQLS + + + V D+ND PMF + ++
Sbjct: 1610 ---------------EQEVFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPMFQQAEF 1653
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++K + FSID TGI+ T ALD
Sbjct: 490 LQVTARDKDQGPNG-DVRYSLLKG---KKWFSIDPITGIITTATALDF------------ 533
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS + I V+D+NDN P+F Y
Sbjct: 534 -------------ESEPAPSVTVIATDGGRPPLSSTAKVDIVVQDVNDNAPVFSSNFY 578
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D GG ++Y+I A G+ F + TG + T + LDR
Sbjct: 1771 VKATDPDS-GPGGELEYKI--AAGDPDGDFQLHSRTGALSTSHGLDR------------- 1814
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + V+A D G+P LS T+++ V D+NDN P+F + Y
Sbjct: 1815 ------------EKKPKYTLEVVAVDRGSPALSATATVEVKVLDVNDNSPVFSKNSY 1859
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V ATD D S G TI Y + +K+ G + F+I+K+TG + T ALDRD
Sbjct: 593 LEVSATDEDRGSFG-TITYALTLKSGGTVQTPFTINKQTGQLCTASALDRD--------- 642
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ L++ D +TV A D G LS A +++ V DINDN P F V Y
Sbjct: 643 -------EGLEKYD--------LTVTATDGG--GLSSAVGVRVKVMDINDNRPTFYPVLY 685
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + YR++ + E F ID G TL+ R +
Sbjct: 2389 ITVTATDRDSGENG-RVNYRVMSSTQE--GFYIDPSNG---TLFINHRAE---------- 2432
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DPER + I + A D G+P LS T+++ + DINDN P+F + +Y
Sbjct: 2433 ----------FDPER-PSVNIVIEASDGGSPALSSLTTVQVHISDINDNAPVFHQSEY 2479
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 77 KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +Y +TV+ D G PQ S + IT+ D+NDN P+F R +Y
Sbjct: 2554 KSLYNLTVVVSDRGVPQRSSSVAALITIGDVNDNPPVFSRPEY 2596
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIY-ITV 83
GE A ++ E G K +AL D IY+ I V Q LDR+ E++ Y + V
Sbjct: 394 GEYANVNVSLEGGDGK--FALTTKD----SIIYL---IYVDQVLDRE----ERDSYDLRV 440
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 441 MATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAY 475
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + YR++ A F I+ +TG + T ALDR
Sbjct: 1134 RVSATDRDAGLNA-RLTYRLLHA---DKHFQINSQTGEISTRLALDR------------- 1176
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ + V+ +D GTP S T I+V D ND+ P F V+
Sbjct: 1177 ------------EQQSSYQLFVVVQDGGTPPRSATGTAHISVLDENDHAPTFTHVR 1220
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D SNG I Y + G F I+ TG++ T KE+
Sbjct: 1668 LKVTATDRDQGSNG-HITYGGVTEDG----FVINPLTGVITT-----------TKEL--- 1708
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P +++ V+D+NDN P+F ++ Y
Sbjct: 1709 -----------DAELQNHYVLTVYARDGGLPPNFAKAVVRVEVQDVNDNAPVFAKMWY 1755
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD NG + + +A G F++D++TG + T LDR E +
Sbjct: 1874 LQVSATDVDEGLNGKILYFLSQEADG---AFAVDEDTGRITTAAPLDR-------EKLAS 1923
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ RV A+D + ++ + +K+T+ D+NDN P F
Sbjct: 1924 YNFRVFAVDLSP-----------------SVPINSSAQVKVTILDVNDNAPFF 1959
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A DVD NG + Y I ++ F ID TG + T +DR EI+
Sbjct: 2184 IQVVAEDVDQGQNG-QVTYSI-QSSSMSGLFKIDPVTGSITTTAIMDR-------EIFTQ 2234
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A DR G+P+L+ T+ + + D NDN P
Sbjct: 2235 TKLVVTATDR------------------GSPRLAGLATLTVIIIDQNDNSP 2267
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 38 GIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC 97
G V ++ L+ +R + D+ V L D E+ + + A D G+P+
Sbjct: 183 GNVGHMFKLES---KRSANKVLYLDLVVSGLL--DREKRSSYSLVIEAFDGGSPRRVGFM 237
Query: 98 TMKITVEDINDNEPMFDRVQY 118
T+++TV DIND+ P+F++ +Y
Sbjct: 238 TLEVTVTDINDHAPVFNQSRY 258
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 32/122 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKA-----PGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
++ ATD D NG + + +I A G+R F ID+ +G V+ + +L D R
Sbjct: 910 RIQATDKDSGHNG-QLSFDLISAGAAGSSGQRT-FGIDRGSGEVRLIGSLSYDSVPRYD- 966
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ VIA+D G PQLS T+ + ++ + P FD +
Sbjct: 967 ------------------------LQVIAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTL 1002
Query: 117 QY 118
Y
Sbjct: 1003 TY 1004
>gi|119605472|gb|EAW85066.1| protocadherin LKC, isoform CRA_a [Homo sapiens]
Length = 932
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 227 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 276 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 322
>gi|338713518|ref|XP_001917170.2| PREDICTED: cadherin-related family member 2 [Equus caballus]
Length = 1008
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ +P FS+D ++GI++ L LDR+
Sbjct: 261 IQAHDND-QPDTNNSRLLFSLLPSPYSH-NFSVDPDSGILRNLGPLDREAI--------- 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV D G P LS + ITVEDINDN P+FD+ Y
Sbjct: 310 -----------DPALGGRIVLTVRVADCGVPVLSTEVNVTITVEDINDNLPIFDKSNY 356
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 416 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 470
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 471 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 509
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 1052 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1099
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++TV+D+NDN P+F
Sbjct: 1100 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1138
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 636 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 681
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 682 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 722
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 524 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 582
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 583 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 629
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 786 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 832
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 991 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 1037
>gi|297293817|ref|XP_001091341.2| PREDICTED: protocadherin Fat 1, partial [Macaca mulatta]
Length = 1603
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFS+D TG+VK ++ LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSVDSATGVVKIMHPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVLKVSLEDVNDNPPKF 927
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETGI++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSGV-GVFKIGEETGIIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLVY--AISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESY 827
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 453 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 507
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 508 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 546
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 1089 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1142
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1143 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPIF 1175
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 673 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 718
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 719 -------------EAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 759
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P R+ F ID +G++ T +DR+ E +
Sbjct: 561 LQLRATDGDAPPNA-NLRYRFVGPPAARSAAAAAFEIDPRSGLISTSGRVDREHMENYEL 619
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 620 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 666
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 823 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 869
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + + + A DNG PQ +D +++ V D+NDN P F
Sbjct: 1028 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQF 1069
>gi|223461419|gb|AAI41302.1| Pcdh24 protein [Mus musculus]
Length = 1309
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P + FS+D TG+++ L LDR+
Sbjct: 610 DDQPDTNNSLLVFSLLPGP-YSSNFSLDPNTGLLRNLGPLDREAI--------------- 653
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TVI D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----DPALEGRIVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQSSY 700
>gi|219518743|gb|AAI45625.1| Pcdh24 protein [Mus musculus]
Length = 1309
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P + FS+D TG+++ L LDR+
Sbjct: 610 DDQPDTNNSLLVFSLLPGP-YSSNFSLDPNTGLLRNLGPLDREAI--------------- 653
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TVI D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----DPALEGRIVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQSSY 700
>gi|432102801|gb|ELK30275.1| Cadherin-related family member 2 [Myotis davidii]
Length = 1311
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ +P FS+D +TG+++ L LDR+
Sbjct: 617 IQAHDED-QPGTNNSRLYFSLLPSPYSH-NFSVDPDTGLLRNLGPLDREAI--------- 665
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV D G P LS + ITVEDINDN P+F++ Y
Sbjct: 666 -----------DPTLEGRIVLTVRVADCGVPVLSTEVNVTITVEDINDNLPIFNQSNY 712
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HA D D GG I Y ++ G F++D ++G V T
Sbjct: 515 IHAFDPDT-GEGGRITYSLLSGNGAEI-FAVDPDSGTV--------------------TV 552
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ LDR E++ Y+T+ A D G LS + T++I + DINDN+P+
Sbjct: 553 KNSKLLDR---EKQAVYYLTLQATDGG--NLSSSTTLEIHLLDINDNQPV 597
>gi|344240392|gb|EGV96495.1| Protocadherin-24 [Cricetulus griseus]
Length = 1330
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P FSID TG+++ L LDR+
Sbjct: 632 DDQPDTNNSRLLFSLLPGPYSH-NFSIDPNTGLLRNLEPLDREAI--------------- 675
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 676 -----DPALEGHIVLTVLVADCGNPPLSTEVNVSITVEDINDNLPIFNQSSY 722
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 520 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 574
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 575 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 613
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 1156 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1203
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++TV+D+NDN P+F
Sbjct: 1204 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1242
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 740 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 785
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 786 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 826
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 628 LQLRATDGDAPLNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 686
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 687 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 733
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 890 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 936
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 1095 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 1141
>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
Length = 4557
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG++ + ALD
Sbjct: 3257 LSVFATSQDIGTNA-EIAY-LIRSGNEKGKFRINSKTGVISIIEALDF------------ 3302
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K+ Y+ V A+D GTP LS T+ + V D+NDN P F + Y
Sbjct: 3303 -------------ESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPTFSQAVY 3347
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D+D P NG I + I+ + +FS+D G+VK LDR
Sbjct: 3366 AEDLDSPPNG-QIHFSIVNGDQDN-EFSVDPVLGLVKVKKKLDR---------------- 3407
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+GTP LS + T+ + + D+NDN P+F Y
Sbjct: 3408 ---------ERISGYSLVVQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANY 3452
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID+ETG++ T LDR
Sbjct: 1064 LQVVARDEDSGRDG-EIQYSIRDGSG-LGRFSIDEETGVIYTADVLDR------------ 1109
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E K ++TV A D+G L + I VED+NDN P+
Sbjct: 1110 -------------ETTKSYWLTVYATDHGVVPLYTTMEVYIEVEDVNDNAPL 1148
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N +QY+I++ F ID +G++ T LD
Sbjct: 2308 LQVVATDADS-DNNKIVQYQIVQDTFNSTDYFHIDSSSGLILTARMLDH----------- 2355
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A DNG P +S + I++ D+NDN P+F+++ Y
Sbjct: 2356 --------------ELIQQCSLKVRATDNGFPPMSSEVLVSISITDMNDNPPVFNQLIY 2400
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD + R
Sbjct: 1797 LVIRATDADSNQNA-LLVYQIVESTAKK-YFTVDSSTGAIRTIANLDHETIAR------- 1847
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ V D+G PQL+ +++T+E D+NDN P+F + +
Sbjct: 1848 ------------------FHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVF 1889
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
MQV A D D +NG +++ ++ F+ID +G + TL LD
Sbjct: 2835 MQVKAVDADSSANGQVTYTLEVESELQKITEAFTIDSNSGWISTLKDLDH---------- 2884
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ V+A D G LS + +TV DINDN P+F+
Sbjct: 2885 ---------------EKDSAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVFEHEV 2929
Query: 118 Y 118
Y
Sbjct: 2930 Y 2930
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + Y I + F+ID E GI+ L LDR+ + E+Y+
Sbjct: 747 LRIKAYDADSGFNG-RVLYTISDGNVDSC-FNIDMEMGILSVLMPLDRE----KTELYL- 799
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + +TVED NDN+P+F + Y
Sbjct: 800 --------------------LNITIYDLGNPQKSSWRLLTVTVEDANDNKPVFLQDSY 837
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 24/88 (27%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FS+D+ +GI+ + LDR E+ + +I V+A D + I +T
Sbjct: 3179 FSVDRSSGIIILEHPLDR-------ELQSSYNITVKASD-------QSIVLT-------- 3216
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ ITV DINDN P+F+R Y
Sbjct: 3217 --LSSFATVTITVLDINDNPPVFERRDY 3242
>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
Length = 3222
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V ATD D + I Y I+++ ++ F+ID G++ T ALD
Sbjct: 472 FRVKATDKDLGGDSEII-YSIVQSE-QKCPFNIDPTLGVITTAAALDH------------ 517
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ERE+E+ V+A D G+P LS T+ I VED+NDN+P+F + Y
Sbjct: 518 -------------ERERELRFLVVASDGGSPSLSSTATVIIHVEDVNDNKPIFPQKFY 562
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 30/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D+D NG TIQY I + FSID TG+++T LDR
Sbjct: 1742 VQASDIDNGLNG-TIQYSI----EDLECFSIDAVTGMIRTTRPLDR-------------- 1782
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + A D+G P LS + + IT+ D NDN P+F R Y
Sbjct: 1783 -----------EERSNYSLLITAADHGHPPLSSSALLHITLTDENDNSPLFARKSY 1827
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV D+D N + Y ++ PG F I+ TG + T LDR EI T
Sbjct: 1636 VQVTTVDLDSEVNSA-VSYSLLPGPGYEL-FRINSHTGHISTSVRLDR-------EIQST 1686
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+RVQA ED+GTP LS T+ +V D NDN P F +
Sbjct: 1687 FTLRVQA------------------EDSGTPSLSSTTTVLCSVLDENDNAPQFSQ 1723
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D NG I Y I+ A F ID GI+ T LDR EI +
Sbjct: 2114 MQVLATDSDSGVNG-QISYFIMDGNHNNA-FVIDSVRGILATNAVLDR-------EIVSS 2164
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ +QA +D G L+ CT+++ V D+NDN P
Sbjct: 2165 YKLIIQA------------------KDMGKAPLTGTCTVRVQVVDVNDNSP 2197
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 77 KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K++Y +TV A D G P LS T +I V D+NDN P+F + Y
Sbjct: 415 KDLYELTVTASDYGCPPLSSVITFQIQVTDVNDNPPVFHQTIY 457
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 76 EKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++I ++ A DNG P LS T+ + V D+ND+ P+F + Y
Sbjct: 1578 SQHVHILIVQARDNGVPSLSSTQTLTVKVLDVNDHPPVFQQHIY 1621
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 26/105 (24%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
P+N + +I + + FSID +TGI+ T LD E Y+ +I+
Sbjct: 797 PANSVEVVSYVISSGDPQGFFSIDSQTGIINTAQPLD-----HESISYVILNIQFHT--- 848
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
GT + + + +++ DINDN P+F +
Sbjct: 849 ------------------GTLPIHSSAQVNVSITDINDNPPVFQK 875
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 28/113 (24%)
Query: 9 DPPS-NGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV 65
DP S G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 242 DPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAAALDRESMERH----------- 290
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 291 --------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 329
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 872 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 925
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 926 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 958
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N + YR + P R F ID +G++ T +DR+ E +
Sbjct: 344 LQLRATDGDAPPNA-NLHYRFVGPPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 402
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
+ +D + R R ++ITV+ E++ PQ S+ + ED++
Sbjct: 403 VVEASDQGKEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDVH 450
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II F+ID TG ++ + LD
Sbjct: 456 LRVTATDRDKDANG-LVHYNIISG-NSHGHFAIDSLTGEIQVVAPLDF------------ 501
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 502 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 542
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR+ E + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 604 SLDRESVE---HYFFGVEARDHGSPLLSASASVTVTVLDVNDNRPEFTMKEY 652
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 811 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 857
>gi|297295803|ref|XP_002804692.1| PREDICTED: cadherin-related family member 2-like [Macaca mulatta]
Length = 1271
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALGGRIVLTVLVSDCGEPVLSTEVNVTITVEDINDNLPIFNQSSY 700
>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
sapiens]
gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Cadherin family member 11; AltName:
Full=Epidermal growth factor-like protein 1;
Short=EGF-like protein 1; AltName: Full=Flamingo homolog
1; Short=hFmi1; AltName: Full=Multiple epidermal growth
factor-like domains protein 2; Short=Multiple EGF-like
domains protein 2; Flags: Precursor
Length = 3312
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1067
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Pan paniscus]
Length = 3312
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1067
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
Length = 4589
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D N I Y II E KFSID TG I+I
Sbjct: 3251 LQVYAASRDIEVNA-EITYAIISG-NEHGKFSIDSTTG-----------------AIFI- 3290
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D D E E Y+TV A D GTP L+D + I V DINDN P+F + Y
Sbjct: 3291 -------IDNLDYESSHEYYLTVEATDGGTPSLNDVAAVNINVTDINDNTPVFSQDTY 3341
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG ++Y ++ + KFSID ETGIVK + LDR+ ++ ++
Sbjct: 843 IQIEATDKDLGLNG-EVKYYLLT---DTDKFSIDSETGIVKVVGPLDRE----KQHVHF- 893
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A D+ D E PQL +K+++ED+NDN P F
Sbjct: 894 --LKIEARDQADME----------------PQLFSTVLLKVSLEDVNDNPPKF 928
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRII----KAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
+QVHATD D N G I Y + K+P F ID +G++ + +LD ++ + K
Sbjct: 2304 VQVHATDSDSVPNRG-ISYHLFENQTKSPDH---FHIDGSSGLISLVRSLDYEEIQEHK- 2358
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V A D+G P LS + + V D+NDN P+FD++
Sbjct: 2359 ------------------------LLVRAVDSGMPPLSSDMIVTVDVTDLNDNPPLFDQL 2394
Query: 117 QY 118
Y
Sbjct: 2395 LY 2396
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD+D +NG I Y + ++ F+ID ETG + TL LD
Sbjct: 2830 IQVKATDLDSGTNG-QILYSLDQSQSLDVIESFAIDMETGWITTLKELDH---------- 2878
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ + +ITVIA D G QLS ++I+V D+NDN P F
Sbjct: 2879 ---------------EKRDKYHITVIASDYGEKVQLSSTAVVEISVTDVNDNPPRF 2919
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + F+ID G +K LDR
Sbjct: 3356 VTVMADDADGPSNN-YIHYSIIDG-NQGNPFTIDPVKGEIKVTQLLDR------------ 3401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F + Y
Sbjct: 3402 -------------EMISGYTLTVQAADNGSPPRVNTTTVNIDVSDVNDNPPVFSKGNY 3446
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y+I++ P F+ID TG ++T+ +LD + E I+
Sbjct: 1793 LVIRAMDADKESNA-LLVYQIVE-PSAHKYFAIDSSTGAIRTVLSLDYE----EAHIF-- 1844
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD--ACTMKITVEDINDNEPMFDRVQY 118
+ TV D GTP+L A + I V DIND P+F ++ Y
Sbjct: 1845 -------------------HFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKMLY 1885
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD+D NG + I + + F ID ETG++K L LDR+ E+ T +
Sbjct: 740 MNATDLDSGFNGKLVYS--ISGGNDDSCFIIDLETGMLKVLSPLDRETTEK-----YTLN 792
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V L G PQ + C + I V D NDN+P F + Y
Sbjct: 793 ITVYDL--------------------GIPQKAAWCLLDIRVLDANDNKPEFLQDNY 828
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N I Y ++ + +FSID+ +GI++ LDR E+
Sbjct: 3147 RVQATDADAGLNH-KIAYSLVNS--ADGQFSIDESSGIIRLEKPLDR-------ELQAVY 3196
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ ++A+D P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3197 NLILKAVDHGVPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3236
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 34/115 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D SN I Y + PG KF ++ +TG +KT LDR+
Sbjct: 3044 MQVSATDADIRSNA-EITYTL-SGPGAE-KFKLNADTGELKTFAPLDRE----------- 3089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI--TVEDINDNEPMF 113
++ +Y ++ +G + C M + T+ED+NDN P F
Sbjct: 3090 ---------------QQAVYNLLVKATDGGGRF---CQMSVVFTLEDVNDNAPEF 3126
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I + I G F ID+E G+++T LDR
Sbjct: 1055 MTVSAHDEDTGRDG-EIHFSIRGGSG-IGIFKIDEEKGVIETAEKLDR------------ 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I VED+NDN P
Sbjct: 1101 -------------ETVSHYWLTVFATDQGVVPLSSFTEIYIEVEDVNDNAP 1138
>gi|355757522|gb|EHH61047.1| Protocadherin-11 X-linked [Macaca fascicularis]
Length = 1327
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D G + + P +FS+D+ TG++ L LDR
Sbjct: 486 KVSATDAD---TGPNAEINFLLGPDAPPEFSLDRRTGMLTVLKKLDR------------- 529
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ + TV+A+DNG P L+ T+ ++V D NDN P F +Y
Sbjct: 530 ------------EKEEKYFFTVLAKDNGVPPLTSNVTVFVSVIDQNDNSPAFTHNEY 574
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 39 IVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDA 96
I + ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 179 IKQNIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSST 231
Query: 97 CTMKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 232 AILQVSVTDTNDNHPVF 248
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 400 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 458
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 459 NDNAPVFTQ 467
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 611 ENDGFTIDSKTGVIRPNISFDR-------------------------EKQESYTFYVKAE 645
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 646 DGGRVSRSSSAKVTINVVDVNDNKPVF 672
>gi|355704970|gb|EHH30895.1| Protocadherin-11 X-linked [Macaca mulatta]
Length = 1327
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D G + + P +FS+D+ TG++ L LDR
Sbjct: 486 KVSATDAD---TGPNAEINFLLGPDAPPEFSLDRRTGMLTVLKKLDR------------- 529
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ + TV+A+DNG P L+ T+ ++V D NDN P F +Y
Sbjct: 530 ------------EKEEKYFFTVLAKDNGVPPLTSNVTVFVSVIDQNDNSPAFTHNEY 574
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 39 IVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDA 96
I + ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 179 IKQNIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSST 231
Query: 97 CTMKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 232 AILQVSVTDTNDNHPVF 248
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 400 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 458
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 459 NDNAPVFTQ 467
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 611 ENDGFTIDSKTGVIRPNISFDR-------------------------EKQESYTFYVKAE 645
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 646 DGGRVSRSSSAKVTINVVDVNDNKPVF 672
>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
Length = 3312
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1067
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 3037
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 70 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 124
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 125 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 163
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 706 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 753
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 754 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 792
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 290 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 335
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 336 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 376
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 178 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 236
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 237 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 283
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 440 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 486
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 645 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 691
>gi|380811826|gb|AFE77788.1| protocadherin-11 X-linked isoform e precursor [Macaca mulatta]
Length = 1339
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D G + + P +FS+D+ TG++ L LDR
Sbjct: 487 KVSATDAD---TGPNAEINFLLGPDAPPEFSLDRRTGMLTVLKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ + TV+A+DNG P L+ T+ ++V D NDN P F +Y
Sbjct: 531 ------------EKEEKYFFTVLAKDNGVPPLTSNVTVFVSVIDQNDNSPAFTHNEY 575
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 235 LQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDGFTIDSKTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|380811824|gb|AFE77787.1| protocadherin-11 X-linked isoform c precursor [Macaca mulatta]
Length = 1347
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D G + + P +FS+D+ TG++ L LDR
Sbjct: 487 KVSATDAD---TGPNAEINFLLGPDAPPEFSLDRRTGMLTVLKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ + TV+A+DNG P L+ T+ ++V D NDN P F +Y
Sbjct: 531 ------------EKEEKYFFTVLAKDNGVPPLTSNVTVFVSVIDQNDNSPAFTHNEY 575
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 235 LQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDGFTIDSKTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
gorilla gorilla]
Length = 3287
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L + ++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSFQVMVQDVNDNAPVF 1067
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGQVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|354471967|ref|XP_003498212.1| PREDICTED: cadherin-related family member 2-like [Cricetulus
griseus]
Length = 1308
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P FSID TG+++ L LDR+
Sbjct: 609 DDQPDTNNSRLLFSLLPGPYSH-NFSIDPNTGLLRNLEPLDREAI--------------- 652
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 653 -----DPALEGHIVLTVLVADCGNPPLSTEVNVSITVEDINDNLPIFNQSSY 699
>gi|170584276|ref|XP_001896931.1| Cadherin domain containing protein [Brugia malayi]
gi|158595708|gb|EDP34239.1| Cadherin domain containing protein [Brugia malayi]
Length = 2348
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D NG I Y++ F ID+ TGI+ T+ LDR+ EKE YI
Sbjct: 490 RIFAIDEDNDING-RITYKLAGEDSANETFRIDQTTGIITTINKLDRE----EKEKYI-- 542
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V AEB G P LSD+ + I V DINDN P F+
Sbjct: 543 -------------------LKVKAEBGGXPPLSDSLLITIIVRDINDNAPYFE 576
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D+D N I Y +I+ G F +D+ +G ++ + LDR+ R +
Sbjct: 798 QVSAVDMDEGDNA-IIDYYLIEENGNGNTFKLDRSSGTLRVVSKLDREMIARYE------ 850
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A+D G P LS + I + D+ND P F+ ++Y
Sbjct: 851 -------------------LTVKAQDRGNPPLSSFSIVSIVIIDVNDYAPQFESLRY 888
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 31 FSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F+ D + G+ + Y+L +D + +I+ +T + +Q D E I I V A D G
Sbjct: 284 FARDLDIGLNGEITYSLGEEDGAKLLQIHNSTGV-IQTAHYLDRELMNIIRIYVYATDKG 342
Query: 90 TPQLSDACTMKITVEDINDNEPMFDR 115
P ++ ++I + D+NDN P+F++
Sbjct: 343 VPPMTSRALLEINLLDVNDNAPVFEQ 368
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 44 YALDRDDPEREKEIY----ITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
YA+ + R I+ ++ +IRV +ALDR+ +R + V A + P +S + +
Sbjct: 190 YAMVAPEDSRSANIFTLDTVSGEIRVGKALDRETLDRH---VLKVTAYERLDPAVSASSS 246
Query: 99 MKITVEDINDNEPMFDRVQY 118
+ + + D+ DN P+F+R Y
Sbjct: 247 VIVEILDVQDNAPIFERNSY 266
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 95 LRVAAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDAQSGLIRTEAALDRESMERH---- 149
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 150 ---------------------YLRVTAQDHGSPRLSATTMVAVTVVDRNDHSPVFEQAQY 188
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 731 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAMPVYE----- 784
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 785 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 817
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 315 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 360
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 361 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 401
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 465 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 511
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 670 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 716
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRII----KAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + A F ID +G++ T +DR+ E +
Sbjct: 203 LQLRATDGDAPPNA-NLRYRFVGPSAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 261
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 262 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 308
>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3253
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG I Y + + G K FSID TGI+ T LD
Sbjct: 489 LQVTARDKDHGPNG-DIAYSLFQDQGAYNKWFSIDSVTGIITTHSQLDY----------- 536
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ITV+A D G P LS + I ++DINDNEP+F+R Y
Sbjct: 537 --------------EKNPNPSITVVATDGGKPPLSSTAVVNIVLQDINDNEPVFERNVY 581
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I YR++ + + F ID G TL+A R
Sbjct: 2360 ITVTATDRDSGDNG-KITYRVMSS--TKGIFYIDPSNG---TLFANQR------------ 2401
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D ++P I + + A+D GTP LS T+ + V D+NDN P+F +++Y
Sbjct: 2402 -----TAFDSENPS----ILVVIEAQDQGTPSLSSIATVHVHVTDVNDNAPIFHQLEY 2450
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + YRI ++ KFS++ TG + LDR+D
Sbjct: 1553 LYVMATDADEGENG-RVTYRI-QSGNTGGKFSLNPNTGSLSIFKPLDRED---------- 1600
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++I+ +T+IAED+G PQ S + + V D+ND P F+ QY
Sbjct: 1601 ----------------QDIFNLTIIAEDHGIPQRSSTQLLCVHVIDVNDEVPWFEETQY 1643
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG I +++ F ID TG + T +DR EI+
Sbjct: 2155 IQVAAVDLDQGQNGQVIYS--LRSSSMSGLFKIDPLTGSITTAAIMDR-------EIWTE 2205
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
T + V A DR GTP+L+ + T+ + V D+NDN PM
Sbjct: 2206 TKLVVTATDR------------------GTPRLAGSATLTVIVTDLNDNSPM 2239
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +NG + + + G + FSID+ +G ++ + +L+ + R
Sbjct: 913 RVQAEDQDSGANG-QLSFDLFSPSGTQRTFSIDRSSGEIRLVGSLNYESTPRYD------ 965
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VIA+D+G PQLS + + V+ ND+ P+FD + Y
Sbjct: 966 -------------------LQVIAKDSGVPQLSATFVLVVHVQAENDHGPVFDTLTY 1003
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 23/119 (19%)
Query: 23 KAPGERAKFSIDKETGIVKTLY---ALDRDDPEREKEIYITTDIRV-QALDRD------- 71
K P ++A F I ++T I A+D D + + Y+ D V QA +
Sbjct: 139 KFPRKKATFRIPEQTAIGTRFPLEPAVDADQGQLSTQGYLIKDGNVGQAFTLETRRGTNG 198
Query: 72 ------------DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ +++ A D G+P+ +D T+ +TV+DINDN P+F++ +Y
Sbjct: 199 VLFLDLVVNTILDREKRSTYTLSLEAFDGGSPKRTDEMTLDVTVQDINDNAPVFNQSRY 257
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 28/103 (27%)
Query: 17 IQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER 75
I Y+I + G+ A F +D+ +G++ T LDR E
Sbjct: 1774 INYKI--SAGDLAGDFHLDRMSGVLSTSRPLDR-------------------------EM 1806
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A+D G P LS T+++T+ DIND+ P F+ Y
Sbjct: 1807 RTGYTLTITAQDQGHPALSSIATVEVTILDINDHSPQFESSAY 1849
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVI 84
GE A ++ E G K +AL D IY+ R+ LDR+ E++ Y + V+
Sbjct: 393 GEYANVNVSLEGGEGK--FALTTKD----NIIYLICVDRI--LDRE----ERDTYELRVM 440
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 441 ATDSGTPPLRAESSFIIQVTDVNDNPPLFDQPVY 474
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D+D NG + Y I F+I+ TG++ T +LDR
Sbjct: 1658 LTVSASDLDQGPNG-QVTYGGIA----EKDFNINPVTGVITTTKSLDR------------ 1700
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ +TV A+D G P T++I V D NDN P+F R+ Y
Sbjct: 1701 -------------ELQEYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNAPVFGRLYY 1745
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+ D G PQ S + + I+V D NDN P F R +Y
Sbjct: 2530 LTVVVSDRGIPQRSSSVLILISVLDTNDNPPAFSRAEY 2567
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D S G +I Y + ++F+I KETG + T LDRD
Sbjct: 596 LEVTARDADGGSFG-SISYSLSSGIKSASPSQFTIGKETGQICTTAVLDRD--------- 645
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TV A D G LS +K+ V DINDN P F V Y
Sbjct: 646 ---------------HGPASFDFTVTAVDGG--GLSSVAYVKVDVVDINDNRPTFYPVNY 688
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D NG + YR + +R F I+ TG + T LDR
Sbjct: 1128 HVSATDRDSGPNG-RLSYRFLHP--DR-HFQINSHTGEINTKTVLDR------------- 1170
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V+ +D G+P S T ITV D NDN+P F
Sbjct: 1171 ------------EQQSSYQLIVLVQDGGSPPRSATGTAFITVLDDNDNDPAF 1210
>gi|324499734|gb|ADY39894.1| Cadherin-4, partial [Ascaris suum]
Length = 2569
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 25/105 (23%)
Query: 14 GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
G TI YR+ A G FS+D +TG +K + LD E++
Sbjct: 1490 GETIDYRLEAADGIEKYFSLDSKTGSLKLAHPLD-------YEVF--------------- 1527
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + ++++A D+GTP LS C ++I V DINDN P F + Y
Sbjct: 1528 ---RRLSVSIVATDSGTPPLSARCAVEIEVLDINDNAPRFSQADY 1569
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 23 KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYIT 82
P R FSI+K G + + +DR+ + + LDR E ++E I
Sbjct: 1078 SGPNSRIFFSIEKNEG--SSAFKMDRESGWL---------MVAEPLDR---ETKEEYVIM 1123
Query: 83 VIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VIA D G L+ + + V D ND+ P+FDR Y
Sbjct: 1124 VIASDEG--HLTSRKNLTVLVTDANDSPPIFDRNYY 1157
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I V+A LDR E++ + V A D G+P L+ + I +ED+NDN P+F
Sbjct: 1618 IAVKAKLDR---EKQSAYRLKVEAADGGSPALTGLTDVIIELEDVNDNAPVF 1666
>gi|432891560|ref|XP_004075584.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3188
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG-ERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG I Y I+K + FSID TGI+ T LD
Sbjct: 480 LQVTARDKDQGPNG-DISYSILKDQSVYHSWFSIDSVTGIITTSSQLDY----------- 527
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ITV+A D G P LS + I ++DINDNEP+F+R Y
Sbjct: 528 --------------EKNPNPSITVVASDGGNPPLSSTAVVNILLQDINDNEPVFERNFY 572
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D S+G I YRI A F +D+ +G++ T LDR
Sbjct: 1712 FTLRATDPDAGSSG-EINYRI-AAGDPSGDFHLDRHSGVLSTSRPLDR------------ 1757
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +T++A+D G P LS T+K+ V DINDN P F Y
Sbjct: 1758 -------------EKTAGYSLTIVAQDQGRPSLSSTSTVKVAVLDINDNSPQFQSNSY 1802
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI ++ R FS++ TG + LDR+
Sbjct: 1506 LFVIARDADQGENG-RVTYRI-QSGNTRGTFSLNSNTGSLSISKPLDRE----------- 1552
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ +T++AED+G PQ S + ++I V D+ND P+F+ QY
Sbjct: 1553 ---------------EQDVFNLTIVAEDHGIPQHSSSQLLRIHVIDVNDETPLFEEAQY 1596
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D NG I Y I FSI+ TG++ T +LDR
Sbjct: 1611 LTVSASDSDQGING-QITYGGIS----HGAFSINSVTGVITTTKSLDR------------ 1653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A+D G P T+KI V D+NDN P+F R+ Y
Sbjct: 1654 -------------ESQDCYTVTVYAKDGGLPPNYAKATVKIKVVDVNDNAPIFGRLYY 1698
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 23 KAPGERAKFSIDKETGIVKTLY---ALDRDDPEREKEIYITTDIRV-QALDRD------- 71
K P +RAKF I ++T I A+D+D + + Y+ D QA +
Sbjct: 130 KFPRKRAKFQIPEQTAIGTRFPLEPAVDKDKGQLTTQGYLIKDGNTGQAFTLETRRGSNE 189
Query: 72 ------------DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ +T+ A D G+P +D T+ ITV+DINDN P+F + +Y
Sbjct: 190 VLYLDLVVNTILDREKRSTYTLTLEAFDGGSPIRTDQMTLDITVQDINDNAPVFQQSRY 248
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ A D+D NG + Y I ++ + F ID TG + T +DR EI+ T
Sbjct: 2091 HIAANDLDQGQNG-QVTYSI-RSSSQSNLFKIDPLTGSISTAAIMDR-------EIWTQT 2141
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ V A DR GTP+L+ + T+ + + D+NDN PM
Sbjct: 2142 KLVVTATDR------------------GTPRLAGSATLTVIIVDLNDNRPM 2174
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N G I YR++ + F ID G TL+ +
Sbjct: 2295 ITVTATDRDS-GNNGKITYRVMST--TKGIFYIDPSNG---TLFTGQNTE---------- 2338
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D + P I + V A+D G P LS T++I V D+NDN P+F + +Y
Sbjct: 2339 -------FDYEHPS----ILVVVEAQDQGFPPLSSTTTVQIQVSDVNDNAPIFKQSKY 2385
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E++ Y + V+A D+G+P L + I V D+NDN P+FD+ Y
Sbjct: 416 QILDRE----ERDTYELRVMATDSGSPPLRAESSFIIEVTDVNDNPPLFDQPVY 465
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 15 GTIQYRII---KAPGERAKFSIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDR 70
GT+ YR+ K G + S D I ++ ++++DR+ EI + + + R
Sbjct: 899 GTVVYRVQAEDKDSGVNEELSFDLSFPIGLQKVFSIDRN----SGEIRLVGSLCYETTPR 954
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D + VIA+D+G PQLS + + ++ N+ P+FD + Y
Sbjct: 955 YD--------LQVIAKDSGVPQLSSTLMLVVHIQAENNQGPVFDTLNY 994
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G++ Y + ++F+I KETG + T LDRD
Sbjct: 587 LEVTAVDADG-GTFGSVTYSLASGSNIAISSQFTIGKETGQICTNAVLDRD--------- 636
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q D D TV+A D G LS +++ +EDINDN P F + Y
Sbjct: 637 -------QGPDSFD--------FTVMAVDGG--GLSSEAYVRVDLEDINDNRPAFYPLGY 679
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A D D NG + Y + F I+ TG + T LDR
Sbjct: 1119 HVLAKDRDSGPNG-RLSYSFLHP---NRHFQINTHTGEISTRMTLDR------------- 1161
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V+ D G+P + T+ ITV D NDN+P F
Sbjct: 1162 ------------EQQSSHQLAVVVHDGGSPSRTATGTVFITVLDDNDNDPTF 1201
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 429
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1019
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++TV+D+NDN P+F
Sbjct: 1020 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 642
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D S GG ++Y + A A F++D TG+++T+ LDR
Sbjct: 4561 QVVAFDRDTGS-GGVVRYALTAADNCTAFFTVDPVTGVLETVTRLDR------------- 4606
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++ V+A D G+P LS T+ I V D NDNEP F++ Y
Sbjct: 4607 ------------ERQETFTCVVLAADQGSPSLSSTTTVDIVVLDRNDNEPSFEQTAY 4651
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E I ++A D GTPQLS T+ I VED+NDN P+F+++ Y
Sbjct: 4906 DREALAAFEIMIMAIDAGTPQLSTNITIMINVEDVNDNAPVFEQLVY 4952
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + +T+I +D+GTP LS + ++I V ++NDN P+F
Sbjct: 5535 DYEMRQAYDLTIIVQDSGTPSLSTSMVLRINVGNVNDNAPVF 5576
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + VIA+D+GTP LS + I + D+NDN P F ++
Sbjct: 4196 DREVQGRYEFRVIAQDSGTPSLSSTMNVTIIIGDLNDNRPRFTSTEF 4242
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E E+ I + ++A D GTP L+ T+ + + D NDN P F
Sbjct: 5431 DFESEETIQVQIMATDQGTPALTATATVLVQLTDFNDNAPRF 5472
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG + Y I+ F++D TG+V LD
Sbjct: 3431 VTATDADSGVNG-QLTYSILSPT---YGFTVDASTGLVTGTVPLDF-------------- 3472
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + +T++A D G+P LS + + + V+D ND+ P F+
Sbjct: 3473 -----------ETRPHLTLTIVATDGGSPALSSSVLVNVQVQDTNDHSPNFN 3513
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ALDR E + V+ D G P LS++ ++ ITV D+NDN P F
Sbjct: 2335 KALDR---ETMAVLRFDVLVTDTGEPPLSNSTSIMITVSDVNDNAPAF 2379
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 52 EREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
ERE T I V A+DR E + ++++A D GTP + + ITV D+NDN P
Sbjct: 4077 ERENA---TVRISVLAIDR---EEYSALNVSLLATDQGTPSQMSSLPISITVTDVNDNAP 4130
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E+++E + V+A D G+PQ +I V D+NDN P+ D
Sbjct: 932 DYEQDQEYFFRVLARDAGSPQQETIRDFRINVLDVNDNTPVAD 974
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R+ L D E + +++V+ ++ P S T+ +TV DINDN P+F
Sbjct: 4796 RLYTLGPLDRELQASYFLSVLVQNTAPPYFSTTATVSVTVLDINDNAPIF 4845
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T ++ L R + E + I V A D G P S + T+ I + DINDN P F + Y
Sbjct: 3052 STTGELRVLRRLNRESTDALVIIVTATDGGAPPRSTSQTITIQLTDINDNVPTFLSLAY 3110
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
D E E + V A D GTP LS + I+V+D+ND P+
Sbjct: 1230 DAEVATEYSVVVRATDGGTPALSSDLVLVISVQDLNDEAPI 1270
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ ++ ITV +D GTP L+ + ++ + + D++DN P+F Y
Sbjct: 2054 QQLDREAFPNGIDLVITV--QDAGTPSLNSSASVHVNIIDVSDNAPVFANNTY 2104
>gi|296193539|ref|XP_002744555.1| PREDICTED: cadherin-related family member 2 [Callithrix jacchus]
Length = 1310
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALGGRIMLTVLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 700
>gi|402873501|ref|XP_003900612.1| PREDICTED: cadherin-related family member 2 isoform 1 [Papio
anubis]
gi|402873503|ref|XP_003900613.1| PREDICTED: cadherin-related family member 2 isoform 2 [Papio
anubis]
Length = 1310
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALGGRIVLTVLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 700
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N I Y + GE+ +F+I+ +TG + T ALDR
Sbjct: 826 VSATDADVGKNA-QITYSLATDNGEQVITEFTINSQTGAITTTKALDR------------ 872
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 873 -------------ESVPSYLLTVTARDGGVPSLSDTTDVEISVTDVNDNAPVFEAPQY 917
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y + + G+ A F+ID TGI++T LDR E Y T
Sbjct: 932 LRVAATDADTDLNG-RVRYGL-EDDGDGA-FTIDSTTGIIRTAKILDR-----ESVAYYT 983
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ +A D G+P LS + I +EDIND+ P F+
Sbjct: 984 --------------------LKAVATDRGSPALSSIVPVTIKIEDINDSPPAFE 1017
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D N I+Y I A E ++ ETG + T LDR
Sbjct: 610 LRVQAYDADE-GNNALIKYTIGARDFTGASTENFPITVKAETGWIYTTKQLDR------- 661
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E+ + TVIA D+G S + T+ +TV D+NDN+P F+
Sbjct: 662 ------------------EQCSKYQFTVIAADSGEEPKSASATVFLTVTDVNDNDPYFEP 703
Query: 116 VQY 118
Y
Sbjct: 704 KTY 706
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D +N ++Y II + FSID G V + LD
Sbjct: 506 RIRAMDADAGANAA-VRYAIIGGNTQNT-FSIDSMNGDVTLVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRF 590
>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Pan troglodytes]
Length = 3087
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1067
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|195118202|ref|XP_002003629.1| GI18018 [Drosophila mojavensis]
gi|193914204|gb|EDW13071.1| GI18018 [Drosophila mojavensis]
Length = 651
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D SN + Y + P A+ F ID +TG++ T +D
Sbjct: 540 LQVMARDRDEGSNAA-LSYALADTPDTHAQWFQIDAQTGLITTRSHIDC----------- 587
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 588 --------------ETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFY 632
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 242 RLSSHRERDGVLYLDLQISGFLDR---ETTPAYSLLIEALDGGTPPLRGLMTVNITIQDV 298
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 299 NDNQPIFNQSRY 310
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG V LD + E +
Sbjct: 325 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDAHTGAVYINKPLDFETKELHE---- 379
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D+G L + I V D+NDN+P + +
Sbjct: 380 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVI 415
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 25/92 (27%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E +KF+I+ +TG + T LDR E +K +T+ A+
Sbjct: 861 ETSKFAINPQTGAITTTKPLDR-------------------------EMDKGYLLTITAK 895
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D G P +SD ++I+V D+NDN P FD VQY
Sbjct: 896 DGGVPPMSDTTDVEISVTDVNDNAPTFDSVQY 927
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D NG ++Y +++ G+ F+ID TG+++T ALDR+ R
Sbjct: 942 LKVTATDIDDGLNG-RVKY-VLENDGD-GSFAIDPATGVIRTAKALDRESTARYN----- 993
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ +A D G+P LS ++ I +ED+ND+ P F++
Sbjct: 994 --------------------LKAVAVDRGSPALSSTISVVIKIEDVNDSPPTFEK 1028
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ + V+A D+G P S + T+ +TV D+NDN+P F+ Y
Sbjct: 663 VKQLDR---EQCSKYQFVVVASDSGEPPKSASATVILTVTDVNDNDPYFEPKSY 713
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG--------ERAKFSIDKETGIVKTLYALDRDDPE 52
+ + ATD D N ++Y I+ G +++ F ID TGIV T +LDR+
Sbjct: 393 ISIKATDQDMGKNS-EVEYSIVSTTGGGTTTLTEDQSTFRIDPRTGIVTTKTSLDRE--- 448
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ E+Y + +QA D +PE ++ + + T+ + V D NDN P
Sbjct: 449 -KTEVYT---VIIQASDLANPESNRQ---------------TASATLVVRVLDDNDNYPQ 489
Query: 113 FDRVQY 118
F Y
Sbjct: 490 FSERTY 495
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D SN ++Y II + F ID +TG V
Sbjct: 513 EIRAIDADAGSNAA-MRYAIIGGNTQNI-FQIDSQTGDV--------------------- 549
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I V+ LD E K I V A+D G P S+ + + V+D+NDN P F
Sbjct: 550 -ILVKPLDY---ETVKNYKIIVRAQDGGMPAKSNTTQLLVRVKDVNDNVPRF 597
>gi|355750450|gb|EHH54788.1| hypothetical protein EGM_15691 [Macaca fascicularis]
Length = 1310
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPTLGGRIVLTVLVSDCGEPVLSTEVNVTITVEDINDNLPIFNQSSY 700
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D NG ++Y I+++ +R SI+ E+G+V T LDR+ E
Sbjct: 467 IQLQARDADEGPNGA-VRYSILRSNQDRL-VSIEPESGLVATAAPLDRESLE-------- 516
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ V+A D G P LS T+ + V D+NDNEP+F R Y
Sbjct: 517 -----------------QLWFLVVAADGGEPSLSSTATVTVQVLDVNDNEPVFQRQLY 557
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A+D D NG I+Y I+ A F +D GI+ T LDR EI +
Sbjct: 2196 MQMFASDADSGING-QIEYSIVSGDPNEA-FILDSVRGILATSIPLDR-------EITPS 2246
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ +QA D+ DP LS T+++ V D+NDN P
Sbjct: 2247 YKLVLQAADQGDPP------------------LSSTATVRVQVVDVNDNSP 2279
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 32/120 (26%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+H P G GTI Y I+ GE F+++ +G+V T LDR+ EK+ Y
Sbjct: 1780 IHTAQASDPDLGENGTILYSIV---GEDCAGCFTVNSRSGVVSTTKVLDRE----EKQNY 1832
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A D G LS + +++ + D NDN P F R Y
Sbjct: 1833 T---------------------LTIQARDYGPTPLSSSTQLQLVLLDRNDNAPSFSRKSY 1871
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y ++ PG FSI+ +TG++ T LDR
Sbjct: 1678 RVSATDGDSEENA-VVWYSLLPGPGYEL-FSINPDTGLITTASYLDR------------- 1722
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V A D+G LS T+ +V D NDN P F
Sbjct: 1723 ------------EQQHGFTLRVQARDSGPRPLSATATVLCSVLDDNDNPPAF 1762
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E +TV D G P L+ + + +TV D NDN P+F +Y
Sbjct: 2559 ALDR---ETTDSYVLTVSVSDRGDPPLNSSAVVMLTVADRNDNAPVFSSTEY 2607
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ R D E + +T+ A D G P + ++I V D NDN P+F++ +Y
Sbjct: 186 MSRLDREEQDFYSLTIEAFDGGVPPRTGTLQLRIHVLDENDNPPVFNQTEY 236
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +IRVQ D E I++ V+A DNG + C + I + D+NDN P F+R Y
Sbjct: 2126 TGEIRVQKDYALDFELSPHIHLVVLA-DNGLQ--TTHCRVSIHLLDVNDNAPRFERSSY 2181
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D S G + + ++++ R F +D +TG+V TL ALDR++ E
Sbjct: 1116 QVWATDADASSEG-KLSFHMLES--HRTHFDVDPKTGVVSTLSALDREEKE--------- 1163
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V+ DNG+P LS T+ I V D NDN+P F
Sbjct: 1164 ----------------EHSVEVVVSDNGSPSLSSTTTVVIRVLDDNDNQPKF 1199
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D PSN ++Y I+ +FSI +G + ALDR
Sbjct: 3292 KVTASDQDGPSNS-LLRYSIVSG-DPLQQFSIHPRSGEISVAAALDR------------- 3336
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LS A + ITV D+NDN P+F RV +
Sbjct: 3337 ------------EEVPHYSLTVQAADGGDPPLSSAILVTITVADVNDNPPIFSRVNH 3381
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D N + + E F ID TG++ T LD
Sbjct: 2236 VQVSASDGDSGRNRDLTFHMLRTERNETEFFDIDPHTGVIVTKQVLDH------------ 2283
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++ + A DNGT LS ++ + V D+NDN P F QY
Sbjct: 2284 -------------EGTNQFHLKIRATDNGTAPLSSEASVLVNVTDVNDNPPDFVSSQY 2328
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D S G++ I A + FSID G ++ + +LDR
Sbjct: 693 VRLRATDAD--SGFGSLLVYAISAGNQDGCFSIDTFAGDLRLVCSLDR------------ 738
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + D G PQ + + +TV D+NDN P FD+++Y
Sbjct: 739 -------------ERNAFYVLNITVYDLGMPQKTAWRFVAVTVTDVNDNPPEFDQLRY 783
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 72 DPEREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER K I V+A+ NGT ++ ++ I V+D+NDNEP+FD Y
Sbjct: 2700 DHERTKWYQIDVMAQGNHNGT-AVASLVSISIQVQDVNDNEPLFDASPY 2747
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
+ +Y L ++ + I T + + D D E ++ +TV A D+ T S+A +++
Sbjct: 2146 RLVYNLQEENASKHFHIDFKTGV-LTVTDPLDYESQRAHVLTVRASDSVTGVFSEA-SVE 2203
Query: 101 ITVEDINDNEPMFDRVQY 118
I VED+NDN P+F + Y
Sbjct: 2204 IEVEDVNDNAPVFSQRAY 2221
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ Q LDR++P ++ I + V+A+D G CT++I + D NDN P F +Y
Sbjct: 2482 VTTQPLDRENPA-QRIIAVKVMAKDGGGK--VAFCTVRIILTDENDNVPQFAASEY 2534
>gi|355691884|gb|EHH27069.1| hypothetical protein EGK_17178 [Macaca mulatta]
Length = 1310
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALGGRIVLTVLVSDCGEPVLSTEVNVTITVEDINDNLPIFNQSSY 700
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N I Y + + P A+ F ID +TG++ T +D
Sbjct: 521 LQVLAHDRDEGLNS-VISYSLAETPETHAQWFQIDSQTGLITTRSHID------------ 567
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS + T+ +T+ D+NDNEP+FD+ Y
Sbjct: 568 -------------CETEPVPQLTVIARDGGVPPLSSSATVLVTIHDVNDNEPIFDQSFY 613
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
HA D D S+G + Y + + G+R FSID +G + + LD + +R
Sbjct: 950 AHAHDRDSGSSG-QVTYSLARDSGKRL-FSIDARSGHLVLSHHLDYETSQRHT------- 1000
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A D G P LS T+ + V+D+NDN P+F+R +Y
Sbjct: 1001 ------------------LTVTATDGGIPPLSSNLTILLDVQDVNDNPPVFEREEY 1038
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +N ++Y I+ + A +GIVKT LDR EI
Sbjct: 2349 QVQAFDADAGANA-RLRYHIVDGNHDNAFIIEPAFSGIVKTNIVLDR-------EI---- 2396
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2397 ---------------RDIYNLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2434
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A +D T + A IY+
Sbjct: 1053 IQVNASDLDT-GNNARITYRIVDA-------GVDNVTTSSSSDVAQHFGIFPNSGWIYLR 1104
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +R + +TV+A DNGTP + I V D NDN+P F R +Y
Sbjct: 1105 A-----LLDRETRDRYQ---LTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKY 1154
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D G+P L T+ IT++D+
Sbjct: 220 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGSPPLRGFMTVNITIQDV 276
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 277 NDNQPIFNQSRY 288
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYI---------------TTDIRVQA 67
PG S+ + E G++ T+ A+D D+ +Y + ++RVQ
Sbjct: 1848 PGSCYGLSVPENTEPGVIHTVVAIDLDEGPNADLVYSIAAGNLGNKFSIDARSGELRVQP 1907
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + V A D G P C + + VED NDN P F+ +Y
Sbjct: 1908 LDR---EQHSRYTLQVQAADRGKPTSRQGHCNITVFVEDQNDNAPRFELSKY 1956
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A D D N +I Y I+K FSID +TG+++T LD +
Sbjct: 1273 VRIRAIDRDNGQNA-SITYSIVKGRDSDGHGLFSIDPKTGMIRTRVVLDHE--------- 1322
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G+P +++ V D+NDN P F
Sbjct: 1323 -----------------ERSIYRLGVAATDGGSPPRETVRILRVEVLDLNDNRPTF 1361
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 33/118 (27%)
Query: 5 ATDVDPPSNGGTIQYRIIK--------APGERAKFSIDKETGIVKTLYALDRDD-PEREK 55
ATD D +NG +QYR+++ + FS+D TG + L LD + PE
Sbjct: 1505 ATDADTGTNG-ELQYRLLRYFPNVNESQEAATSLFSMDPLTGSLSLLAPLDFEAVPE--- 1560
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Y+ + VQALD+ N T +L + T+++ + D+NDN P F
Sbjct: 1561 --YL---LIVQALDQ---------------SSNVTERLQTSVTVRLRIVDVNDNAPHF 1598
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 36 ETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE--REKEIY-ITVIAEDNGTPQ 92
E G+V+ YA++R ++EK I D R A+ + P KE++ + V+A+D+G
Sbjct: 314 ENGLVE--YAINRRQSDKEKMFRI--DPRTGAIYINKPLDFETKELHELVVVAKDHGEQP 369
Query: 93 LSDACTMKITVEDINDNEPMFD 114
L + I V D+NDN+P +
Sbjct: 370 LETTAFVSIRVTDVNDNQPTIN 391
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 446 RDNSIYLV--IVNLPLDR---EMVSNYTLSVVATDKGTPPLHASKSIFLKITDVNDNPPE 500
Query: 113 FDRVQY 118
F++ Y
Sbjct: 501 FEQDLY 506
>gi|67970055|dbj|BAE01373.1| unnamed protein product [Macaca fascicularis]
Length = 740
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 35 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDPDTGLLRNLGPLDREAI--------- 83
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 84 -----------DPALGGRIVLTVLVSDCGEPVLSTEVNVTITVEDINDNLPIFNQSSY 130
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A D+D PS+ ++Y I+ A + + F+ID G +K LDR
Sbjct: 3331 VNAEDLDGPSHS-QVRYSIV-AGNQGSPFTIDAARGELKVARQLDR-------------- 3374
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER +TV+A D+GTP LS + + I + D+NDN P+F + Y
Sbjct: 3375 -----------ERTSGYTLTVVASDSGTPPLSSSAMINIDISDVNDNPPLFSQANY 3419
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D +NG I Y II E FS+D +G V + LD
Sbjct: 3224 LRVQAASRDTEANG-EISYGIISG-NEHGLFSVDPRSGDVFVIEPLDY------------ 3269
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E YIT+ A D G+P LSD T+ I + D+NDN P+F + Y
Sbjct: 3270 -------------EASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVY 3314
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D N + + A G FSID++TG++ LDR E+ T ++R
Sbjct: 3124 ASDIDVGLNSDIVYSLLDSADG---FFSIDEQTGVISLERPLDR-------ELQATYELR 3173
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G+P+ S C + I+V DINDN P+F+ +Y
Sbjct: 3174 A------------------LASDQGSPRFSSVCLVVISVLDINDNPPVFEHREY 3209
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + +++++ G + F+ID++TG++ T LD ++ ++ K
Sbjct: 2276 LQVDAKDADT-GNNQDVFFQLVEEKGRSSDLFTIDRDTGVISTAQVLDYEETQQHK---- 2330
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV+ +D G P L+ + + V D+NDN P F + Y
Sbjct: 2331 ---LRVRXVD------------------GGVPALTSEVLVTVDVTDLNDNAPEFTQNTY 2368
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ++D D N G + Y I+ G F+ID TG+V LDR E++
Sbjct: 813 IQVDSSDKDQ-GNNGVVLYSIL---GGTDHFAIDANTGVVSVTKPLDR-------ELHPV 861
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++ A D+ E PQL + I++ED+NDN P F
Sbjct: 862 YVLKIAARDQAFNE----------------PQLVSTVPLTISLEDVNDNPPKF 898
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I + F+ID TG++ T LD E IY
Sbjct: 454 LTVKATDHDRGENG-YVTYSITNMSPQ--PFAIDYFTGVITTSELLDY---ELMPRIY-- 505
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+++V+A D P RE E Y+TV T+ ++NDN+P+F+ V
Sbjct: 506 -NLKVRASDWGSPYRREVEAYVTV------------------TLNNLNDNKPLFENV 543
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D N + Y+I++ P F+ID TG ++ ALD
Sbjct: 1765 LVIRASDADGDQNA-MLVYQIVE-PFAHNYFAIDSNTGAIRITTALDY------------ 1810
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E+ + TV D G P+L +TVE D+ND P+F + Y
Sbjct: 1811 -------------EQRNAFHFTVQVHDLGMPRLFAEAAANVTVEVIDVNDCPPVFSQKMY 1857
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A+D D +NG + + + F+++ ETG V TL LDR
Sbjct: 2802 IQVRASDQDSGTNGHVVYSLDARQSSQEISELFAVNSETGWVTTLKELDR---------- 2851
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMF 113
E+ ++ I V+A D G Q +++TV D+NDN P F
Sbjct: 2852 ---------------EKMEKYTIGVLATDQGDRVQHVTGTRVEVTVADVNDNPPRF 2892
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 26/97 (26%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G ++Y I G F+ID+ETG+++T LD E
Sbjct: 1038 GEVRYSIRDGSG-LGIFTIDEETGVIRTQELLDH-------------------------E 1071
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
++TV A D G LS + + V+D+NDN P
Sbjct: 1072 TTPHYWLTVYAMDRGVVPLSTFVEVYVEVQDVNDNAP 1108
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D SN I Y + A E F ID +TG +KT LDR++ E +
Sbjct: 3018 LQVSASDADIRSNA-HITYELQGAGSEL--FIIDSDTGELKTSQPLDREEQEEHR----- 3069
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++A+D E +++ ++VED+NDN P F Y
Sbjct: 3070 --FTMRAVDGGGRYCEADVH--------------------VSVEDVNDNPPQFSSDPY 3105
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 32 SIDKETGIVKTLYALDRDDPER-----EKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
++D++ G ++ L ++D E EI + + ++L+ D +I V+A
Sbjct: 2078 AVDRDIGQNAEIHYLLKEDQEHFQISPSGEISLKKKLEKESLNTD-------FFIVVVAR 2130
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P LS + +TV +N P+F++ Y
Sbjct: 2131 DNGEPALSAEAEVPVTV--VNKAMPVFEKAFY 2160
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V T DP S G ++Y I K E+ F ID ++G++ TL LDR
Sbjct: 1124 VQVTAKDPDSGGSLLRYTITKG-NEQNNFVIDPQSGLITTLRPLDR-------------- 1168
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +TV A D GTP +S T + + D NDN+P F QY
Sbjct: 1169 -----------EFKSEYKLTVSASDGGTPPVSTDVTFTVKITDENDNQPEFKEKQY 1213
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D+D SNG + K + KF ID+ TG + T ALDR
Sbjct: 2776 LRVFAEDLDSGSNGMVTYALVSKDKLVKEKFDIDQHTGWITTRGALDR------------ 2823
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ V A DNGT +L+ T++ V D+ND P F + ++
Sbjct: 2824 -------------EKQPSFEFQVRATDNGTTRLTSLTTVRAIVLDVNDTPPKFSQSEF 2868
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +N I+Y I A G AK F I +ETG++K +DR++ +
Sbjct: 3292 LQVFATDRDSGTNA-QIKYSI--AEGNDAKKFKIVEETGVIKVSGDIDREEVASYR---- 3344
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++V+A D+ P PQ++D + I V D+NDN P F
Sbjct: 3345 ---LKVRAQDQGLP-----------------PQVADT-VVDIEVTDVNDNSPEF 3377
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 25/102 (24%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I Y I A F IDK++G+V +LD + + I
Sbjct: 2271 INYFIQNVSRVGAFFKIDKKSGVVFVAKSLDYESRVVHEMI------------------- 2311
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++A D G P L+ +++ + D NDN P FD+ Y
Sbjct: 2312 ------IVAADEGKPSLTGETRVRVVLMDANDNAPRFDKSMY 2347
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 27/111 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
VHA+D D +NG I Y+I+ G KF +++ +G+V LD + E+E+Y
Sbjct: 812 HVHASDKDQGTNG-FITYQIVNDFG--GKFRVNRISGVVSVGDYLDYE----EQEMY--- 861
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
I +QA+D + DN Q + + +T+ DINDN P+
Sbjct: 862 KIEIQAMDS--------------SVDN---QKVGSTHVIVTLLDINDNSPI 895
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D +G + Y I++ R FSI TG + T LD Y T
Sbjct: 1749 QLVAVATDQDISGDKLTYEIVETSA-RDVFSIHPATGAITTAKVLD----------YEVT 1797
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P+ +I +T D+G P+LS +KI V DIND P+F Y
Sbjct: 1798 -----------PQYAFKIKVT----DSGNPRLSAFADVKIHVTDINDIAPVFSASTY 1839
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N +++ I+K + ID ++G+V T ALDR
Sbjct: 464 IQMTARDADEGPNA-DVRFSILKT-NQDGLIRIDPQSGLVTTAAALDR------------ 509
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++E++ V+A D G P LS T+ +T+ED+NDNEP+F + Y
Sbjct: 510 -------------ESQEELWFLVVAADGGEPTLSSTATVSVTLEDVNDNEPVFQQQLY 554
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A+D D NG I+Y I+ A F +D GI+ T ALDR+ IT
Sbjct: 2151 MQVFASDADSGVNG-QIEYSILSGNNNGA-FILDSLGGILATNVALDRE---------IT 2199
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ + + + A D GTP LS T+++ V D+NDN P+
Sbjct: 2200 SSYK----------------LVLQASDKGTPPLSSTATVRVQVVDVNDNSPV 2235
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 38 GIVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDPEREKEIYITV 83
G+V T+ A+D+D + + YI I ALDR ER + + V
Sbjct: 1097 GLVGTVEAVDKDSGKNSQLSYILLSDGKFFRINARTGEIINWVALDR---ERHGQHTLKV 1153
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ D G P+L+ T+ I + DINDN P F +
Sbjct: 1154 MVTDQGHPRLNATATVHILITDINDNSPQFRHI 1186
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ ITV A D+G PQLS T+ + V D+ND P+F + Y
Sbjct: 1571 DYETQQVHRITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSEIIY 1617
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D N + Y ++ PG FSI+ +G++ T LDR
Sbjct: 1632 VRVSATDIDSEENA-VVWYSLLPGPGYEL-FSINPYSGVITTNSRLDR------------ 1677
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V A D+G LS T+ +V D NDN P+F
Sbjct: 1678 -------------EQQSHFMLRVQARDSGLRPLSGTATVLCSVLDDNDNPPVF 1717
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV D G P L+ + +++TV D NDN P+F +Y
Sbjct: 2516 DRETTESYELTVSVSDRGIPPLNSSAVVRVTVTDCNDNAPIFSSTEY 2562
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I YR++ +P + F I +TG V T L
Sbjct: 2356 LTVSATDRDSGLNG-KITYRLLSSPLQ--GFYIQPDTGSVFTSKPL-------------- 2398
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A+ +P I++ V A D G P S ++ + + D ND+EP+F + Y
Sbjct: 2399 -----KAITNTNP-----IHLLVEARDGGDPVRSTVASIDVLILDSNDHEPLFPQDVY 2446
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 31/117 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A DVD S I Y + A F+ID+ TG++ ALD
Sbjct: 2256 QVAANDVDLNS---AITYSFSENSSSSAPFTIDRYTGLITLTQALDH------------- 2299
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +KE + V A D+ + +K+ V D+NDN P+F +V Y
Sbjct: 2300 ------------EAQKEYTLKVWASDSIHHTSGE---VKVQVLDVNDNAPVFTQVSY 2341
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + Y + + G + FSID TG+++T +LDR
Sbjct: 1841 LRVSAFDPDEGPNG-DVTYSLTE-DGNQGAFSIDAFTGVIRTTKSLDR------------ 1886
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDR 115
E + + V+A D+ + LS ++ I VED+NDN P+ D+
Sbjct: 1887 -------------ESRAQYTLRVVASDSCSQGPLSSVVSVSIQVEDVNDNIPICDQ 1929
>gi|403290094|ref|XP_003936167.1| PREDICTED: cadherin-related family member 2 [Saimiri boliviensis
boliviensis]
Length = 1308
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFSLLPGPYNH-NFSLDSDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV+ D G P L+ + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALGGRIVLTVLVSDCGEPVLTTKVNVTITVEDINDNLPIFNQSSY 700
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HATD D + G I Y ++ PG A F +D +G V
Sbjct: 503 IHATDPDTGA-WGQITYSLL--PGNGADLFQVDPTSGTVTVRNG---------------- 543
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ LDR E + Y+T+ A D G LS + T++I + DINDNEP+
Sbjct: 544 ----KLLDR---ESQAVYYLTLQATDGG--NLSSSTTLQIHLLDINDNEPV 585
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y ++ A + +F+ID ++G+V +LDR
Sbjct: 3373 LQIQATDADSGVNG-ELSYAVVNA-SDYPEFAIDPQSGVVVLRKSLDR------------ 3418
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + Y V+A D G P+L++ + IT+ DINDN P F
Sbjct: 3419 -------------ELQSDYYFLVVAHDGGEPELNETVEVSITLSDINDNAPQF 3458
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 25/89 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E+GIV + +LD E + + ++V+A+D G
Sbjct: 3295 NFDIDPESGIVSVMRSLDY-------------------------ETQAQYMLSVVAQDGG 3329
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
TP LS + +TV D NDN P FD+ +Y
Sbjct: 3330 TPALSSTTLLNVTVLDFNDNRPTFDKGRY 3358
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 72 DPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDR 115
D ER I +TV+A D+G PQ LS + I V DIND+ P+FDR
Sbjct: 2362 DYERHSRITLTVMATDSGPPQPLSSTALVFIQVTDINDSPPVFDR 2406
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D +N I +RI A + F ID +G + T
Sbjct: 1179 LGLEAFDNDHTANMDNITFRI-TAGDPQGHFHIDTYSGRITT------------------ 1219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD R LDR E + + + V D+GTP LS + I V DIND++P F +VQY
Sbjct: 1220 TDRR---LDR---EIQDKFLLDVTITDDGTPPLSSVTQVLIHVGDINDHDPKFTQVQY 1271
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
DD + ++Y + V+ LDR ER + +T+ A D G P+ S + ++ + V D+ND
Sbjct: 780 DDSCFKMDLYKGNLMLVEPLDR---ERTPKYVLTITAYDLGEPKKSASISVVVYVLDVND 836
Query: 109 NEPMFDRVQY 118
N P+F++ Y
Sbjct: 837 NPPIFEKSLY 846
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 30/121 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A DVD NG + Y + A F ID +TG + L ALDR
Sbjct: 2854 LRLVANDVDIDLNG-VVTYDFFERNDPAADIFQIDSQTGWITNLIALDR----------- 2901
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRVQ 117
E ++V+A DNG+P Q S + I V D NDN P F R
Sbjct: 2902 --------------ESVPSYNLSVVARDNGSPLKQYSTSSVF-INVVDYNDNPPTFSRDL 2946
Query: 118 Y 118
Y
Sbjct: 2947 Y 2947
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 484 LQVVAHDRDE-GNNSVVTYFLAETPETHAQWFQIDSQTGLITTRSHID------------ 530
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS + T+ +T+ D+NDNEP+FD+ Y
Sbjct: 531 -------------CETEPVPQLTVIARDGGQPALSSSATVLVTIHDVNDNEPIFDQSFY 576
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 183 RLSSHRERDGVLYLDLQISGFLDR---ETTPAYSLLIEALDGGTPPLRGLMTVNITIQDV 239
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 240 NDNQPIFNQSRY 251
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D GTP LS T+ + V+D+NDN P+F+R +Y
Sbjct: 958 QHLDYEVSQRHTLI---VTARDAGTPSLSSNLTILVDVQDVNDNPPLFERDEY 1007
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +N ++Y I+ + A +GIVKT LDR EI
Sbjct: 2314 QVQAFDADAGANA-RLRYHIVDGNHDNAFVIEPAFSGIVKTNIVLDR-------EI---- 2361
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++Y + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2362 ---------------RDVYQLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2399
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+ATD D N + YRI+ A + S + + + + +Y+
Sbjct: 1022 IQVNATDRDT-GNNARLTYRIVDAGVDNVSISNSHALSDISQHFGVFPN----SGWLYLR 1076
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ +R + +TV+A DNGTP + I V D NDN+P F R Y
Sbjct: 1077 S-----PLDREQRDRYQ---LTVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKRSNY 1126
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYI---------------TTDIRVQA 67
PG S+ + ET ++ T+ A D D+ +Y T ++ ++
Sbjct: 1807 PGSCYGLSVPENSETSVIHTVVATDLDEGVNADILYSIIGGNLGNKFSIDARTGELSARS 1866
Query: 68 LDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E+ + V A D G P L C + I VED NDN P F+ +Y
Sbjct: 1867 LDR---EQHSRYTLQVQASDRGKPNSLQGQCNITILVEDQNDNAPRFELPKY 1915
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A D D N +I Y I+K FSID +TG+++T LD +
Sbjct: 1245 VRIRAIDRDSGQNA-SITYSIVKGRDSDGHGLFSIDPQTGVIRTRTVLDHE--------- 1294
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G P +++ V D+NDN P F
Sbjct: 1295 -----------------ERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTF 1333
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L ++ + V DINDN P
Sbjct: 409 RDNSIYLV--IVNLPLDR---ETISNYTLSVVATDKGTPPLHATKSIFLRVTDINDNAPE 463
Query: 113 FDRVQY 118
F+ Y
Sbjct: 464 FEHSVY 469
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 31 FSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F +D + GI+ T DR+ E IY+T R+ AL R++ NG
Sbjct: 1725 FHVDWQRGIITTRGQFDRELQSEYRLPIYVTDANRLTALASSSI-RKQRSSTETSTTSNG 1783
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
Q D T+ IT+ D+ND+ P F
Sbjct: 1784 --QHFDVATVVITIGDVNDHAPEF 1805
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID +TG + LD + E +
Sbjct: 266 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDSQTGAIFINKPLDFETKELHE---- 320
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V+A+D+G L + I V D+NDN+P +
Sbjct: 321 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 354
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+ D GG I+Y I + FSI+ +G ++ + LD
Sbjct: 812 VMASSSDSAQRGG-IRYSIYSGDPD-GYFSIESSSGNIRIAHPLDH-------------- 855
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + ++ + + A +G P + +KI VED+NDN P F+
Sbjct: 856 -----------EAKAQVLLNIQATSSGDPPVYGHTQVKIEVEDVNDNAPEFE 896
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 29/109 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D+D N I+Y ++ + + F I TG + T LDR+ ++E+Y D
Sbjct: 1143 VQASDLDLGDNAA-IRYSLMP---QNSSFQIQPITGEITTKEPLDRE----QRELY---D 1191
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ V+A D G+PQ S ++I V D+NDN P
Sbjct: 1192 LLVEA------------------RDQGSPQRSARVPVRIHVTDVNDNAP 1222
>gi|332263050|ref|XP_003280569.1| PREDICTED: cadherin-related family member 2 [Nomascus leucogenys]
Length = 1102
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 372 IQAHDND-EPGTNNSRLLFSLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 420
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +T++ D G P LS + ITVEDINDN P+F++ Y
Sbjct: 421 -----------DPALGGRIVLTMLVSDCGEPVLSTKVNVTITVEDINDNLPIFNQSSY 467
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D +N I Y I+ + A +GIVKT LDR EI
Sbjct: 2136 MQVSATDGDMGANANII-YHIVDGNHDNAFVIEPPFSGIVKTNIVLDR-------EI--- 2184
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ Y +T+IA D G+PQL+ CT++I + D+NDN+P F
Sbjct: 2185 ----------------RDFYRLTIIATDEGSPQLTGTCTLRINIVDVNDNQPTF 2222
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q+ A D D N + Y I+++P + F ID TG++ T K I
Sbjct: 447 FQLSALDRDL-GNNSVVTYSILESPDTHSDWFQIDGRTGLITT-----------RKHIDC 494
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD Q IT++A D G P L+ T+++T+ D+NDNEP+FD+ Y
Sbjct: 495 ETDPVPQ--------------ITILASDAGRPSLTGTATVRVTIRDVNDNEPIFDQSFY 539
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE--DNGTPQLSDACTMKITVED 105
R RE++ + D+++ +RE + +++ E D G P L T+ IT++D
Sbjct: 147 RLSSHRERDGVLYLDLQINGF----LDRETTAFYSLVIEALDGGNPPLRGFMTVNITIQD 202
Query: 106 INDNEPMFDRVQY 118
+NDN+P+F++ +Y
Sbjct: 203 VNDNQPIFNQSRY 215
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR+ +R +TV+A DNG P S A T+ + V D NDN+P+F R Y
Sbjct: 1009 KSLDREMRDRYT---LTVVATDNGLPPGSAAATVNVFVNDANDNDPVFTRDVY 1058
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E FS+D +G++ LDR
Sbjct: 1498 LHVIAVDRDARDNG-RVSYSIVSG-NEDGAFSLDVASGVLAVTRPLDR------------ 1543
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A D+G P + + I VEDINDN P F R Y
Sbjct: 1544 -------------ESQNRYALNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLY 1588
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D NG I Y+++ P F ID G + LD
Sbjct: 867 HAHDDDSGDNGAVI-YQLLTNP--DGLFKIDPRQGFIMLTRKLDF--------------- 908
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + A+D G+P L T+ I V+D+NDN P F++ +Y
Sbjct: 909 ----------ETTQKYALVIGAQDKGSPPLRSNLTLNIEVQDVNDNPPTFEKNEY 953
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD D N ++Y + +P + F I +ETG++ T L +
Sbjct: 2342 LSINATDADKGENA-RVRYSLAISPTD--AFYISEETGVIYTNQTLTFN----------- 2387
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+ + + V A+D G P LS ++I + D+N+N P F + Y
Sbjct: 2388 -------------PRQPVLQLVVKAQDRGRPSLSSVVAVRIQIADVNNNAPKFSQDVY 2432
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D NG I Y I + +R + F ID TG++ LD +
Sbjct: 230 LQVFATDTDAGDNG-RITYSINRRQSDRDSVFVIDPLTGVISVNRPLDFE---------- 278
Query: 60 TTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
KE++ + V+A D+G L + I V D+NDN+P + +
Sbjct: 279 ----------------TKEVHELVVVASDSGVQALETTAFVSIRVTDVNDNQPTINLI 320
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V ATD D N I Y + + F ID ETG++ T DR E+ T
Sbjct: 1812 MTVQATDADRGHNA-KITYSLSNE--TQWLFKIDNETGVLTTTGHFDR-----ERRGSYT 1863
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++R R D EK + IT+ D+NDN+P+F
Sbjct: 1864 FEVRATDGGRYDARSEK-------------------AQIHITITDVNDNKPVF 1897
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D SNG IQY + F I+ +GI+ + LD + E + +T
Sbjct: 1395 AVDPDDGSNGA-IQYTLTHQ-WPVGAFKINANSGILTLINPLDHEQ-HPEFTVVVTAS-- 1449
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D PE E + +L+ + T +I VED NDN P+F
Sbjct: 1450 ------DQPENEAD-------------RLTSSVTARILVEDFNDNAPVF 1479
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ + LDR E + + + V A D G+P L + + V D NDN P
Sbjct: 373 RDNIIYMIVSL---PLDR---EVKPNMTLVVTATDQGSPPLHASRAFNLRVTDTNDNAPQ 426
Query: 113 FDRVQY 118
F++ Y
Sbjct: 427 FEQTMY 432
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG I Y I KFSID TG + +
Sbjct: 1709 VVATDADSGVNG-EITYSITGG-NVGNKFSIDLHTGQLSS-------------------- 1746
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
+ LDR E + Y+ + A+D G P C + ++V+D ND++P F + +Y
Sbjct: 1747 ---RPLDR---ELKDRYYLIIAAQDRGVPSPRQGFCNITVSVDDENDSDPRFTQNRY 1797
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 59 ITTD----IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IT+D + V+ +DR+ E ++ + V+A D G+P + + I V+D+NDN P+F
Sbjct: 2478 ITSDTGEILLVKTVDRE----EISVFNLKVLAMDRGSPARNSTADVVIHVDDVNDNPPVF 2533
Query: 114 DRVQY 118
++ Y
Sbjct: 2534 NQTLY 2538
>gi|282165827|ref|NP_001028536.2| protocadherin 24 precursor [Mus musculus]
Length = 1308
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P + FS+D TG+++ L LDR+
Sbjct: 610 DDQPDTNNSLLVFSLLPGP-YSSNFSLDPNTGLLRNLGPLDREAI--------------- 653
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
DP E I +TVI D G P LS + ITVEDINDN P+F++
Sbjct: 654 -----DPALEGRIVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQ 697
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D GG + Y I++ + A +GIVKT LDR+
Sbjct: 1513 QVSALDED---RGGRLLYHIVEGNHDNAFVMEPPLSGIVKTNIVLDRE------------ 1557
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IR L +TVIA D G PQL+ CT++I V DINDN+P+F
Sbjct: 1558 -IRDSYL------------LTVIATDEGEPQLTGTCTLRIAVVDINDNQPVF 1596
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D N + +++++ PG++ +KF I G + LDR+ +
Sbjct: 354 LQVSATDKDT-GNNARLTFKLLEGPGQQQASKFGIFPNNGFLYLKEQLDRETADHHT--- 409
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ V DNG+P LS T+++ V D NDN+PMF++
Sbjct: 410 ----------------------LAVEVVDNGSPALSSTATVQVRVLDANDNDPMFEK 444
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 34 DKETGIVKTLYALDRDDPEREKEIYITTD---------------IRVQALDRDDPEREKE 78
+ E ++ TL A D D +Y TD + + LDR E + +
Sbjct: 1083 NNELKVIHTLVASDEDVGPNADIVYSITDGNAGNKFGVDSRTGRLSSRPLDR---EMQSQ 1139
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++TV+A D G+P S C M + V D NDN+P F+ +Y
Sbjct: 1140 FHLTVLARDRGSPPRSGTCNMTVHVLDQNDNDPQFEHSEY 1179
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + + A D G+P LS T+ + V+D+NDN P F+R QY
Sbjct: 293 DYEVRQKYGLVLTATDGGSPPLSSNMTLLVEVQDVNDNAPTFERPQY 339
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D N + I+A G A F+I + +G+V T LD
Sbjct: 567 QVQAVDADEGKNADV--FYEIRADGSPA-FAIHRTSGVVTTRTVLDH------------- 610
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V+A D G P + ++K+ V D+NDN+P F
Sbjct: 611 ------------EQQDYYSLVVVARDGGAPPMEARLSLKVHVLDLNDNQPTF 650
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D + I YRI+ F + G V
Sbjct: 1823 IRVSATDLDISRDNHNINYRIMDG-NAGGTFVVSGSLGEV-------------------- 1861
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + LDR E+ + V+A D GTP ++ + I+++D+ND P F++ Y
Sbjct: 1862 --ILAKPLDR---EKVMMYSLKVVAIDRGTPSMNATAQVIISIDDVNDYAPTFNQTYY 1914
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D SN ++Y ++ A G F I+ TG + T LDR
Sbjct: 464 VSAHDKDAGSNAA-LRYSLVNANG---SFQINPVTGEIFTKVLLDR-------------- 505
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + +T D GTP +K+ V D+NDN P+F
Sbjct: 506 -----------ESKSSYEVTAEVHDQGTPPRFHRAIVKVVVADVNDNAPVF 545
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y +I + E+ F++D TG++ LDR+D
Sbjct: 883 LHIIATDNDSRDNK-RVSY-VINSGNEKGHFALDINTGVLTVAKPLDRED---------- 930
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V D+G LS + + V+D+ND+ P F R +Y
Sbjct: 931 ---------------VHHFVLNVSVSDHGRIPLSTFQVLHVYVQDVNDSPPRFLRERY 973
>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
Length = 4549
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + ALD
Sbjct: 3257 LSVFATSQDIGTNA-EIAY-LIRSGNEKGKFRINSKTGAISIFEALDY------------ 3302
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K+ Y+ V A+D GTP LS T+ + V D+NDN P F + Y
Sbjct: 3303 -------------ESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQAVY 3347
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D+D P NG I + I+ + +FS+D G+VK LDR
Sbjct: 3366 AEDLDSPPNG-QIHFSIVNGDQDN-EFSVDPGLGLVKVKKKLDR---------------- 3407
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+GTP LS + T+ + + D+NDN P+F Y
Sbjct: 3408 ---------ERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNGPIFTPANY 3452
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID+ETG++ T LDR
Sbjct: 1064 LQVVARDEDSGRDG-EIQYSIRDGSG-LGRFSIDEETGVIYTADILDR------------ 1109
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E K ++TV A D+G L + I VED+NDN P+
Sbjct: 1110 -------------ETTKSYWLTVYATDHGVVPLYTTIEVYIEVEDVNDNAPL 1148
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
MQV A D D +NG +++ E+ F+ID +G + TL LD
Sbjct: 2835 MQVKAVDADSSANGQVTYTLAVESELEKITEAFTIDSNSGWISTLKDLDH---------- 2884
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ V+A D G LS + +TV DINDN P+F+
Sbjct: 2885 ---------------EKDPAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVFEHEV 2929
Query: 118 Y 118
Y
Sbjct: 2930 Y 2930
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N +QY+I++ F ID +G++ T LD
Sbjct: 2308 LQVVALDADS-DNNKLVQYQIVQDTFNSTDYFHIDSSSGLILTARMLDH----------- 2355
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A DNG P LS + I + D+NDN P+F+++ Y
Sbjct: 2356 --------------ELIQQCSLKVRATDNGFPPLSSEVLVSIFITDMNDNPPVFNQLIY 2400
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 24/88 (27%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FS+D+ +GI+ + LDR E+ + +I V+A D + I +T
Sbjct: 3179 FSVDRSSGIIILEHPLDR-------ELQSSYNISVKASD-------QSIVLT-------- 3216
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ ITV DINDN P+F+R Y
Sbjct: 3217 --LSSFATVTITVLDINDNPPVFERRDY 3242
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + Y I + F+ID ETG++ L LDR+ + ++Y+
Sbjct: 747 LRIKAYDADSGFNG-RVLYTISDGNVDSC-FNIDMETGVLNVLMPLDRE----KTDLYL- 799
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G P S + +TVED NDN+P+F + Y
Sbjct: 800 --------------------LNITIYDLGNPPKSAWRLLTVTVEDANDNKPVFLQDSY 837
>gi|74188482|dbj|BAE25870.1| unnamed protein product [Mus musculus]
Length = 1308
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ P + FS+D TG+++ L LDR+
Sbjct: 610 DDQPDTNNSLLVFSLLPGP-YSSNFSLDPNTGLLRNLGPLDREAI--------------- 653
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
DP E I +TVI D G P LS + ITVEDINDN P+F++
Sbjct: 654 -----DPALEGRIVLTVIVADCGEPSLSTNVNVTITVEDINDNLPVFNQ 697
>gi|348516900|ref|XP_003445975.1| PREDICTED: cadherin-related family member 2 [Oreochromis niloticus]
Length = 1197
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ ATD D P I Y I+ + R F+ID++TG++ LDR+
Sbjct: 508 VRIEATDGDEPKTPNSQIVYGIVSSTYSR-NFTIDRDTGVLTNSVELDREAV-------- 558
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DPE EI + V A D G PQ S + T+ I V+DINDN P F Y
Sbjct: 559 ------------DPELGGEINLEVTATDQGEPQRSTSVTVTINVQDINDNTPKFFAPSY 605
>gi|410915828|ref|XP_003971389.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3314
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 28/105 (26%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G + YRI +A +F +D +TG + L ALDR+
Sbjct: 1588 GRVSYRI-QAGNSAGRFRLDADTGSLSILKALDRE------------------------- 1621
Query: 75 REKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ +T++AED+G PQLS + + + V D+ND P+F R ++
Sbjct: 1622 -EQDVFNLTIVAEDHGIPQLSRSQVLSVQVIDVNDEAPVFQRAEF 1665
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG ++YR++K+ + FSID TGI+ T LD
Sbjct: 492 LQVTARDKDQGPNG-DVRYRLLKSKNSHSDWFSIDPVTGIITTATVLDF----------- 539
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A DNG P LS + I ++D+NDN P+F Y
Sbjct: 540 --------------ESEPAPSVTVVAMDNGRPPLSSTAKVDIVLQDVNDNTPVFSSNFY 584
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D + GG ++YRI A F + TG + T LDR
Sbjct: 1783 LKATDPDSGA-GGELEYRI-TAGDPDGDFHLHPSTGALSTSRGLDR-------------- 1826
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V+A D G+P LS T+++ V D+NDN P+F Y
Sbjct: 1827 -----------ETRAEHILEVVATDRGSPALSTTVTVQVQVMDVNDNSPVFSESSY 1871
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DPER + I ++A D G+P LS T+++ + D+NDN P+F + +Y
Sbjct: 2446 DPERPA-VSIVIVARDGGSPSLSSLTTVQVQISDVNDNAPVFHQSEY 2491
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A DVD NG + Y I ++ G F ID TG + T +DR EI+
Sbjct: 2196 IQVVAEDVDQGQNG-QVTYSI-QSSGMSGLFKIDPVTGSITTAAIMDR-------EIFTQ 2246
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A DR G+P+L+ + T+ + + D NDN P
Sbjct: 2247 TKLVVTATDR------------------GSPRLAGSATLTVIIVDQNDNSP 2279
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + YR++ +R F I+ +TG V T ALDR
Sbjct: 1132 RVSATDRDAGLNA-RLTYRLLHT--DR-HFQINSQTGEVSTRLALDR------------- 1174
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ + V+ +D GTP S T ITV D NDN P F +
Sbjct: 1175 ------------EQQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPAFSHTR 1218
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 77 KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K Y +TV+ D G PQ S + +T+ D+NDN P+F R +Y
Sbjct: 2566 KSFYNLTVVVSDRGVPQKSSSVAAVLTIGDVNDNPPVFSRAEY 2608
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIY-ITV 83
GE A ++ E G K +AL D IY+ I V Q LDR+ E++ Y + V
Sbjct: 396 GEYANVNVSLEGGDGK--FALKTKD----SIIYL---IYVDQELDRE----ERDSYELRV 442
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 443 MATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAY 477
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + + A G F++D+ TGI+ T ALDR E + +
Sbjct: 1886 LEVSAADADDALNGKVLYFLSHDAHG---AFTVDENTGIITTSAALDR-------EKWPS 1935
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +V A+D ++ A N + Q++ + V D+NDN P+F
Sbjct: 1936 YNFQVFAVD-----------LSPAAPRNSSAQVT------VAVLDVNDNAPVF 1971
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D SNG + Y + G F I+ TG++ T KE+
Sbjct: 1680 LRVTAVDRDQGSNG-HVTYGGVTEEG----FVINPVTGVITT-----------TKEL--- 1720
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P +++ V+D+NDN P+F ++ Y
Sbjct: 1721 -----------DSEAQGHYTLTVYARDGGLPPNFAKALVRVEVQDVNDNAPVFAKLWY 1767
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V ATD D S G + Y + G F++ KE+G + T LDRD
Sbjct: 599 LEVSATDEDRGSFGA-VSYALGSPSGSSPPGPFTVGKESGRLCTSTPLDRD--------- 648
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q D+ D +TV A D G LS A +++ V DINDN P F V Y
Sbjct: 649 -------QGADKFD--------LTVTATDGG--GLSAAARVRVWVVDINDNRPAFYPVLY 691
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 74 EREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK T++ E D G+P+ + T+++ V DIND+ PMF++ +Y
Sbjct: 214 DREKRSSYTLMIEAFDGGSPKRIGSMTLEVIVTDINDHAPMFNQSRY 260
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 9 DPPS-NGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV 65
DP S G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 341 DPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAAALDRESMERH----------- 389
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G P+LS + +TV D ND+ P+F++ QY
Sbjct: 390 --------------YLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFEQAQY 428
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 971 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1024
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++ V+D+NDN P+F
Sbjct: 1025 ---------------------LTAYAVDRGVPPLRTPVSIQVIVQDVNDNAPVF 1057
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER----AKFSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N + YR + P R A F ID +G++ T +DR+ E +
Sbjct: 443 LQLRATDGDAPLNA-NLHYRFVGPPATRKAAAAAFEIDPRSGLISTSGRVDREHMESYEL 501
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 502 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 548
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 555 LRVTATDQDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 600
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 601 -------------EAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 641
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 910 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHY 956
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR+ E + V A D G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 703 SLDRESVE---HYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEY 751
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 9 DPPS-NGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV 65
DP S G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 341 DPDSGEAGRLVYSLAALMNSRSLELFSIDPHSGLIRTAAALDRESMERH----------- 389
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G P+LS + +TV D ND+ P+F++ QY
Sbjct: 390 --------------YLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFEQAQY 428
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 971 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1024
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++ V+D+NDN P+F
Sbjct: 1025 ---------------------LTAYAVDRGVPPLRTPVSIQVIVQDVNDNAPVF 1057
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER----AKFSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N + YR + P R A F ID +G++ T +DR+ E +
Sbjct: 443 LQLRATDGDAPLNA-NLHYRFVGPPATRKAAAAAFEIDPRSGLISTSGRVDREHMESYEL 501
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 502 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 548
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 555 LRVTATDQDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 600
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 601 -------------EAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 641
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 910 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHY 956
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR+ E + V A D G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 703 SLDRESVE---HYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEY 751
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ +R
Sbjct: 323 LRVVAQDPDT-GEAGRLVYSLAALMNSRSLDLFSIDPQSGLIRTEAALDRESMDRH---- 377
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 378 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 416
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 959 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1012
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1013 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1045
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 543 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 588
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 589 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 629
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 431 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAADAFEIDPRSGLISTSGRVDREHMESYEL 489
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 490 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 536
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 693 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 739
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 898 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 944
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A DVD SN I YR++ G++A F ++ G V + +LDR
Sbjct: 2289 QMQAVDVDADSNR-NIYYRLLD--GDKALFRVNSSNGNVYAMRSLDR------------- 2332
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E TV+A D+GTP+L+ T+ ++V D NDN P+F++ Y
Sbjct: 2333 ------------EQQSEYTATVLAIDSGTPRLTGTGTLILSVSDRNDNAPVFEKPFY 2377
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHATD D +NG + ++ E + FSI+ +TG V T LDR+ R + I
Sbjct: 2701 QVHATDADEGTNGDV--FYQFESVAETSLFSIESDTGKVFTRSKLDRETMSRYRLI---- 2754
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
VQA+DR G P + CT+ + V D NDN P F R+
Sbjct: 2755 ---VQAVDR------------------GFPANTGTCTVMVEVADKNDNSPRFTRL 2788
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D PS G I+Y I+ A FSID+ETG+++ K++
Sbjct: 2179 IKVSATDFDVGPS--GLIRYSIV-AGDPNHDFSIDEETGVIRV-----------HKQV-- 2222
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER+ ITV AED+ T D C + IT++D+NDN P F
Sbjct: 2223 ------------DYERKNRYVITVQAEDSSTEARHDTCMISITLKDVNDNPPTF 2264
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D +NG T +YRI+ E KF + +DP +++ +
Sbjct: 142 ATDRDIGNNGITSKYRIVGG-NEDGKFDLRTS------------NDPNTFSVVFLYLET- 187
Query: 65 VQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V LDR+ +KE Y + + AED G P + + ITV D NDN P+FD Y
Sbjct: 188 VATLDRE----QKEFYRLNISAEDGGNPPMHGYLIVNITVLDTNDNPPIFDHSAY 238
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QVHA+D D N I Y + ++ ++A +FSID+ TG++ T +
Sbjct: 253 LQVHASDADAGDNA-RISYSLAESNAKQANQFSIDQHTGVISTNF--------------- 296
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D + +R K +TV A DNG+P+ + + + D ND++P
Sbjct: 297 --DNIICGANRASGSVNKSCVLTVYARDNGSPRQDGRTYVTVNLVDTNDHDP 346
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q+ ATD D NG T+ Y + + + F ID +G + T ALDR
Sbjct: 587 QITATDNDLGPNG-TVSYALQSSVKLQYGDMFEIDPLSGRITTAMALDR----------- 634
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER +TVIA+DNG P LS + + V D+NDN P+
Sbjct: 635 --------------ERCAFYQLTVIAKDNGQPSLSSTVNVSVHVADVNDNRPIL 674
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D NG + Y ++ G FS++ +TG+ +T+
Sbjct: 1865 SVRATDADIGQNG-QVSYSVLSDWGNDL-FSLNPQTGVFT-----------------LTS 1905
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E+ + V A+D G P LS T+ + V D NDN P+FD + Y
Sbjct: 1906 NL--------DYEQYQHYIFVVSAQDAGVPSLSSTVTVYMNVIDFNDNSPVFDPLSY 1954
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 26/117 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D + Y I+ RA F+ID TG + T LDR
Sbjct: 3432 VTVSATDRDVRPSNNQFVYAILDGNINRA-FTIDPNTGDLHTASNLDR------------ 3478
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E +TV A DNG P + T+ +T+ D+NDN P F+ +
Sbjct: 3479 -------------ESMSHYNLTVGAIDNGIPSQTGQTTVLVTIADVNDNAPYFENTE 3522
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV + LDR E + E I V+A+D G P LS T+ + V D NDN P+F++ QY
Sbjct: 2111 LRVNSELDR---ELKSEYQIIVVAKDRGKPPLSATTTIIVHVLDENDNSPVFEQRQY 2164
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q A D+D NG + Y I A R F ID TG+++ ALD
Sbjct: 1333 QFSAEDMDLGLNG-EVSYSI-SAGNIRDAFRIDAITGVLRVNKALDF------------- 1377
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + + A D G+P LS + ++ + D+NDN P+F
Sbjct: 1378 ------------EQKSSYALNITAADGGSPSLSTSIVFQLKLTDVNDNAPVF 1417
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 23/90 (25%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE--DN 88
F++D +G++++L + DR+ V+ + D YITV A DN
Sbjct: 1144 FAVDPRSGVIRSLKSFDREK-------------LVETMSHD--------YITVEASVSDN 1182
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
G P+L + + V D NDN P+F R Y
Sbjct: 1183 GNPRLKSETRIVVHVLDENDNPPVFSRKVY 1212
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D P N G Y ++ + +F +D+ +G+++++ +LDR
Sbjct: 3538 MVLSAKDKDAPPNTGPFAYFLVGGV-HKNRFELDRHSGVLRSVESLDR------------ 3584
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ + V DNG+P + I V D NDN
Sbjct: 3585 -------------ESNPQMDLIVEVHDNGSPMHKSRTKITINVTDKNDN 3620
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK + +T +A D GTP S + I V D+ND+EP F++ +Y
Sbjct: 420 DREKVPWYNLTFVATDKGTPSRSTIKFLIIRVNDVNDHEPQFEKSEY 466
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + + I++ +R F+IDK+TG+V T+ L+R
Sbjct: 481 VAVSATDEDTGVNA--LVFYGIESGNDRHWFAIDKKTGLVTTVEILNR------------ 526
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + + + A D G + T+KI ++D ND P F
Sbjct: 527 -------------EEQDLVELKIYAHDGGPNRKFAYTTLKIHIQDENDEAPAF 566
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 22/97 (22%)
Query: 39 IVKTLYALDRDDPEREKEIYITT---------DIRVQA----------LDRDDPEREKEI 79
+V ++ A DRD + K Y T R++A +DR+ + K
Sbjct: 1435 MVASVVATDRDLKQNSKISYSLTGQVPHTEPFHFRIKAETGQIYTAREIDREFTDTYK-- 1492
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+T+ A D+G P L+ + + +ED+NDN P F V
Sbjct: 1493 -LTITATDHGEPALTSEKALTLVIEDVNDNAPSFISV 1528
>gi|149039916|gb|EDL94032.1| rCG24298 [Rattus norvegicus]
Length = 1287
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 3 VHATDVDPP-SNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A D D P +N + + ++ PG ++ FSID +TG+++ L LDR+
Sbjct: 576 IQAYDDDQPGTNNSRLLFSLL--PGSYSQNFSIDPDTGLLRNLEPLDREAI--------- 624
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV D G P LS + ITVEDINDN P+F++ Y
Sbjct: 625 -----------DPALEGRIVLTVHVADCGEPSLSTDVNVTITVEDINDNLPIFNQSSY 671
>gi|109504669|ref|XP_214434.4| PREDICTED: cadherin-related family member 2-like [Rattus
norvegicus]
gi|293342620|ref|XP_001070261.2| PREDICTED: cadherin-related family member 2-like [Rattus
norvegicus]
Length = 1310
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 26/119 (21%)
Query: 3 VHATDVDPPSNGGTIQYRIIKA--PGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ A D D P GT R++ + PG ++ FSID +TG+++ L LDR+
Sbjct: 606 IQAYDDDQP---GTNNSRLLFSLLPGSYSQNFSIDPDTGLLRNLEPLDREAI-------- 654
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV D G P LS + ITVEDINDN P+F++ Y
Sbjct: 655 ------------DPALEGRIVLTVHVADCGEPSLSTDVNVTITVEDINDNLPIFNQSSY 701
>gi|351710657|gb|EHB13576.1| Protocadherin-11 X-linked [Heterocephalus glaber]
Length = 985
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F++D+ TGI+ + LDR
Sbjct: 454 KISATDTDSGHNAEISYLLGMDAPSE---FNLDRRTGILTVVKKLDR------------- 497
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 498 ------------EKQEKYYFTVLAKDNGMPPLMTNATVFVTVLDQNDNSPIFTHNEY 542
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 174 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVSDTNDNHPVF 216
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 368 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 426
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 427 NDNAPIF 433
>gi|395505212|ref|XP_003756938.1| PREDICTED: cadherin-related family member 2 [Sarcophilus harrisii]
Length = 1318
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
DP +N I++R++ +P + F++D TG++ LDR+
Sbjct: 612 DPNTNNSEIRFRLLPSPYSK-NFTLDSVTGLLTNRGPLDRE------------------- 651
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP +I +TV D G P L+ + I VEDINDN P+F+ Y
Sbjct: 652 -AIDPNLSGKIVLTVFVYDLGVPSLNTTVNVNINVEDINDNIPVFNFTIY 700
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 60 TTDIRVQALDRD--DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
T +++V L + D E+++ + + VIA D+ + +S A + I VEDIND+ P F++ Q
Sbjct: 426 TGEVQVLVLQSNLVDFEQKQIMELEVIANDSSSHMISTA-KVTIHVEDINDHAPEFNKSQ 484
Query: 118 Y 118
Y
Sbjct: 485 Y 485
>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
Length = 4557
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF+I+ +TG + +LD
Sbjct: 3257 LSVFATSQDIGTNA-EITY-LIRSGNEKGKFNINSKTGAISISESLDY------------ 3302
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K+ Y+ V A+D GTP LS T+ + V D+NDN P F +V Y
Sbjct: 3303 -------------ESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVY 3347
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D+D PSNG I + I+ + +FS+D +G+VK LDR
Sbjct: 3366 AEDLDSPSNG-QIHFSIVSGDQDN-EFSVDPGSGLVKVKKKLDR---------------- 3407
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+GTP LS + T+ + + D+NDN P+F Y
Sbjct: 3408 ---------ERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANY 3452
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID+ETG++ T LDR
Sbjct: 1064 LQVVARDEDSGRDG-EIQYSIRDGSG-LGRFSIDEETGVIYTADVLDR------------ 1109
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E K ++TV A D+G L + I VED+NDN P+
Sbjct: 1110 -------------ETTKSYWLTVYATDHGVVPLYATIEVYIEVEDVNDNAPL 1148
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N +QY+I++ F ID +G++ T LD
Sbjct: 2308 LQVVATDADS-DNNKIVQYQIVQDTFNSTDYFHIDSTSGLILTARMLDH----------- 2355
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A DNG P LS + I++ D+NDN P+F+++ Y
Sbjct: 2356 --------------ELIQQCSLKVRATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIY 2400
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
MQV A D D +NG +++ E+ F+ID +G + TL LD
Sbjct: 2835 MQVKAVDADSSANGQVTYTLAVESELEKITEAFTIDSNSGWISTLKDLDH---------- 2884
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ V+A D G T LS + + V DINDN P+F+
Sbjct: 2885 ---------------EKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVFEHEV 2929
Query: 118 Y 118
Y
Sbjct: 2930 Y 2930
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + Y I + F+ID ETG++K L LDR+ + ++YI
Sbjct: 747 LRIKAYDADSGFNGKVV-YTISDGNADSC-FNIDIETGVLKVLMPLDRE----KTDLYI- 799
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + +TV D NDN+P+F + Y
Sbjct: 800 --------------------LNITIYDLGNPQKSAWRLLTVTVGDANDNKPIFLQDSY 837
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1797 LVIRATDADSNQNA-LLVYQIVESTAKK-YFTVDSSTGAIRTIANLDH------------ 1842
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++T+E D+NDN P+F + +
Sbjct: 1843 -------------ETIAHFHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVF 1889
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 24/88 (27%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FS+D+ +GI+ + LDR E+ + +I V+A D + I +T
Sbjct: 3179 FSVDRSSGIIILEHPLDR-------ELQSSYNISVKASD-------QSIVLT-------- 3216
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ ITV DINDN P+F+R Y
Sbjct: 3217 --LSSFATVTITVLDINDNPPVFERRDY 3242
>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
Length = 4342
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D P N I Y I+ + +FSID TG + LDR
Sbjct: 3335 LQVRAIDLDGPPNNFII-YSIVSG-DPKQQFSIDPRTGFITLRSMLDR------------ 3380
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LS A + +TV D+NDN PMF ++ +
Sbjct: 3381 -------------EEITHYSLTVQAADEGDPPLSSAVQVTVTVSDVNDNPPMFSKINH 3425
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D S G + ++I+ + +R F+ID +TG++ TL +LDR
Sbjct: 1157 LKVSATDMDKSSEG-KLAFQILDS--QRIYFTIDSKTGVISTLSSLDR------------ 1201
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E++ E I V+ D G P LS T+ I V D NDN P F
Sbjct: 1202 -------------EQKAEHIIEVMVSDKGEPPLSSTATVVIEVLDENDNSPQFSH 1243
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q +ATD D NG + I + E F+ID G +K + ALDR+ +KE YI
Sbjct: 735 LQFNATDNDSGFNGKLVYS--ISSGNEDGCFTIDVNAGDLKVICALDRE----QKEFYI- 787
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + + + D NDN P+F + +Y
Sbjct: 788 --------------------LNITVYDLGYPQTSTWKLLAVNILDANDNPPLFSQSRY 825
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 27/102 (26%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
++Y II E +F I+ TG++ ALD ER
Sbjct: 3246 VRYSIISG-NEDGRFMINPVTGLLSVKAALDF-------------------------ERC 3279
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E Y++V G P LSD + I + D+NDN P+F+R Y
Sbjct: 3280 REYYLSVEGA-RGKPLLSDIAMVIINITDVNDNPPVFNRSSY 3320
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A DVD N G + Y I A FSID TG++ T D E K Y
Sbjct: 480 LSVSAIDVDK-DNNGFVTYAI--ANTGPVPFSIDPLTGVISTSQEFDY---ELMKRWY-- 531
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+R+ A D +P R E CT+ IT+ ++NDN P+F+RV
Sbjct: 532 -HLRIWASDSGNPFNRVSE------------------CTVTITMTNVNDNVPVFERV 569
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V+A D D N G +Y + F I+++TG+VK + LDR E +
Sbjct: 840 FKVNAVDFDL-DNNGAFKYSLFTF---TDLFQIEEDTGVVKVIGPLDR-------ETFRR 888
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D+ ++A D+ P+ PQL + + +EDINDN P F
Sbjct: 889 YDLTIEARDQAKPD----------------PQLFSFTDVVVVLEDINDNPPKF 925
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 26/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G ++Y I G F++D+ETG+++T LDR E
Sbjct: 1065 GVVRYYIHDGSG-LGVFTVDEETGVIQTAGLLDR-------------------------E 1098
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++TV A+D GT L + I V DINDN P + Y
Sbjct: 1099 VVPHYWLTVYAKDLGTIPLVSWTEVYIEVWDINDNPPELSQPVY 1142
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
+ +Y L+ D+ R I T + + D D E E + +TV A D+ + ++A ++
Sbjct: 2200 RLIYNLEEDNASRLFNIDFKTGV-LSVTDFLDFESETKHILTVRATDSVSGTFAEA-KVE 2257
Query: 101 ITVEDINDNEPMFDRVQY 118
I VEDINDN P+F + Y
Sbjct: 2258 IDVEDINDNAPVFQNLSY 2275
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 34/120 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A+D D +NG Q KF +D +TG + TL LDR
Sbjct: 3024 LKISASDPDIGTNG---QVSFTLHGPNADKFHLDPKTGELFTLAVLDR------------ 3068
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT--VEDINDNEPMFDRVQY 118
EREKE + V A D G +C +T V+D+NDN P F Y
Sbjct: 3069 -------------EREKEYDLVVKATDGG----GRSCQADVTLMVQDMNDNPPQFSTSHY 3111
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G++ Y II + KF+I+++ IV + Q LDR++P
Sbjct: 2507 GSVDYTIINKLADE-KFAINEDGQIVTS-----------------------QPLDRENPS 2542
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ I I ++A+D G CT+KI + D NDN P F +Y
Sbjct: 2543 -QRVIAIKIMAKDGG--GRVGFCTVKIILTDENDNVPQFKASEY 2583
>gi|443728421|gb|ELU14777.1| hypothetical protein CAPTEDRAFT_226654 [Capitella teleta]
Length = 2555
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 24/119 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D +NG I Y I+K+ + + +F I+ +GI++T DR E +I +
Sbjct: 473 VQVRAVDQDSGANG-NITYSIVKSNDQSSERFQIEPTSGILRTADIFDR-----EGQIGV 526
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +T+ A+D G P L+ CT+++ + D NDN P+F+ +Y
Sbjct: 527 TG-----------------FGVTIKAKDQGNPSLAGFCTVRVKIGDTNDNPPVFNLPEY 568
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 26/120 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRI--IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V A+DVD N G++ Y + +++ G + FSI+ TG++ T+ LD
Sbjct: 1095 LTVIASDVDQ-GNNGSVHYSLKQVQSRGNQPLFSINSHTGLISTM--LD----------- 1140
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E E+E I V A+D G+P +S + + I + D+ND+ P F + Y
Sbjct: 1141 -------NVLDR---ETEEEYNIIVQAKDKGSPPMSSSAVVTIVITDVNDHPPKFTQPIY 1190
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 32 SIDKETGIVKTL-YALDR-DDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDN 88
+ D++TG+ K Y++DR DP R+ + + + A LDR E E E I ++A D
Sbjct: 1318 ATDRDTGLNKLFKYSIDRLTDPARQFAVDANGLVTISAALDR---ETEAEHRIHILAIDE 1374
Query: 89 GTPQLSDACTMKITVEDINDNEPMF 113
G P ++ T+ +T+ DINDN P F
Sbjct: 1375 GDPPMTGTGTLIVTLLDINDNFPKF 1399
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D S I+Y + E F I + TG EIY T
Sbjct: 983 LTVRATDPDT-SRHSKIRYSLTGQFAEDRTFMIQEHTG-----------------EIYAT 1024
Query: 61 TDIRVQALDRDDPEREKEIYITVIAED---NGTPQLSDACTMKITVEDINDNEPMFDR 115
++LDRD P V+A+D G P L+ +++ DINDN P+FDR
Sbjct: 1025 -----RSLDRDAPYGRPVWNFNVLAQDEVGTGQPSLTGYAEVRVMPRDINDNAPVFDR 1077
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD+D +N + +S+ V+TL + YI
Sbjct: 260 MQVTATDLDSVTNA-------------QLTYSVSDSNFSVQTLNNIG----------YIR 296
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
T R LD D + T+ A DNGTP L+ + ++++V+++ND +P+F
Sbjct: 297 TAKR---LDYDHIPNHTYNF-TITATDNGTPTLTGSAVIRVSVDNVNDEDPVF 345
>gi|326914508|ref|XP_003203567.1| PREDICTED: protocadherin Fat 3-like [Meleagris gallopavo]
Length = 3426
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF+I+ +TG + +LD
Sbjct: 2126 LSVFATSQDIGTNA-EITY-LIRSGNEKGKFNINSKTGAISISESLDY------------ 2171
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K+ Y+ V A+D GTP LS T+ + V D+NDN P F +V Y
Sbjct: 2172 -------------ESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVY 2216
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D+D PSNG I + I+ + +FS+D +G+VK LDR
Sbjct: 2235 AEDLDSPSNG-QIHFSIVSGDQDN-EFSVDPGSGLVKVKKKLDR---------------- 2276
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+GTP LS + T+ + + D+NDN P+F Y
Sbjct: 2277 ---------ERISGYSLVIQARDSGTPPLSSSVTVNVDISDVNDNSPVFTPANY 2321
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N +QY+I++ F ID +G++ T LD
Sbjct: 1177 LQVVATDADS-DNNKIVQYQIVQDTFNSTDYFHIDSTSGLILTARMLDH----------- 1224
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A DNG P LS + I++ D+NDN P+F+++ Y
Sbjct: 1225 --------------ELIQQCSLKVRATDNGFPPLSSEVLVSISITDMNDNPPVFNQLIY 1269
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
MQV A DVD +NG +++ E+ F+ID +G + TL LD
Sbjct: 1704 MQVKAVDVDSSANGQVTYTLAVESELEKITEAFTIDSNSGWISTLKDLDH---------- 1753
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ V+A D G T LS + + V DINDN P+F+
Sbjct: 1754 ---------------EKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVFEHEV 1798
Query: 118 Y 118
Y
Sbjct: 1799 Y 1799
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 666 LVIRATDADSNQNA-LLVYQIVESTAKK-YFTVDSSTGAIRTIANLDH------------ 711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++T+E D+NDN P+F + +
Sbjct: 712 -------------ETIAHFHFHVHVRDSGNPQLTAESPVEVTIEVTDVNDNPPVFSQAVF 758
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 24/88 (27%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FS+D+ +GI+ + LDR E+ + +I V+A D + I +T
Sbjct: 2048 FSVDRSSGIIILEHPLDR-------ELQSSYNISVKASD-------QSIVLT-------- 2085
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ ITV DINDN P+F+R Y
Sbjct: 2086 --LSSFATVTITVLDINDNPPVFERRDY 2111
>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
Length = 4039
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++D R+ L D E + E +TV+AED G+P+L+ T+++ V+D+NDN P FD+ Y
Sbjct: 2261 SSDGRISLLRTLDREDQSEFLLTVLAEDRGSPRLTGTGTVRVLVDDVNDNTPTFDQQSY 2319
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D N G YR+I + F++D+ +G + T +DR
Sbjct: 3495 MTLSATDPDLDPNRGPFSYRLIGGHNSQ-YFTLDQGSGRLSTTRQIDR------------ 3541
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E++ + Y+ V D+G+P +S T+ I VED+NDN M
Sbjct: 3542 -------------EQQSDFYLIVETTDSGSPSMSSTHTVHIVVEDVNDNPSM 3580
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D SNG +YR+ A F ++ TG V T LDR
Sbjct: 2645 LTVSASDADSGSNG-EFEYRLRAAGNLDNSFQVNPNTGQVSTRRFLDR------------ 2691
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + V A D G+P L+ T+ ITVED NDN PM R Y
Sbjct: 2692 -------------EQRDSYSLVVEAVDKGSPTLTGTATVLITVEDKNDN-PMQFRNLY 2735
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D +N ++Y I E++ F+I+ TG + +L DR +E+ T
Sbjct: 1133 VTAVDRDAGTNA-ELRYSFIT---EQSDFAINPSTGAISSLRMFDR------EELIQRTG 1182
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ L+ V D G P L D T++ITV DINDN P F + Y
Sbjct: 1183 LSTFTLE-------------VAVTDGGDPPLQDRATLQITVRDINDNVPRFAQDTY 1225
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D SNG IQY I + +F+++ +G V T +DR E T D
Sbjct: 1453 VTATDPDSGSNG-EIQYSIASQVPQGDQFAVNPSSGQVFTRAEIDR-------EFASTFD 1504
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I V+A D+ P E+ VI + + D+NDN P+F
Sbjct: 1505 ITVRATDQAIPVSERRHAFKVI---------------TVIIRDVNDNNPLF 1540
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D N ++Y + PG KF++D TG ++ LDR
Sbjct: 2020 MTIRAEDPDEERNS-YVEYSMASIPGN--KFALDSVTGQLRVNGDLDR------------ 2064
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P +S + + I + D NDN P+F V Y
Sbjct: 2065 -------------EATPSYIVTVTATDKGRPPMSASMDLTINLLDRNDNNPVFGPVSY 2109
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V A D D SNG + Y R F +D TG + TL DR+ ++Y
Sbjct: 611 ITVTAQDDDQGSNG-EVYYEFDTETANRYSGSFRLDSNTGRIDTLVTFDRE----TTDLY 665
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A DR +P ++ + + VI V D+NDN P+F V+Y
Sbjct: 666 ---SLVVRASDRGNPPQQSAVRVNVI------------------VGDLNDNNPVFYPVRY 704
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VIA D GTP LS T+ I + D ND+ P+F V Y
Sbjct: 2914 FVVIATDRGTPPLSGEVTVIINIIDANDHAPVFQEVSY 2951
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 44/109 (40%), Gaps = 27/109 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D SNG I Y I + F++D TG + ALD Y +T++
Sbjct: 1350 ATDGDAGSNG-EITYSISEG-NAHGTFTLDSYTGKLYLAKALD----------YESTNV- 1396
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A D+GTP LS I V D NDN P F
Sbjct: 1397 --------------YRLNITASDHGTPPLSTVIPFAINVLDSNDNPPTF 1431
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 29/113 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V ATD+D +N I Y + GE A KF ID TG+V TL LD
Sbjct: 288 LTVRATDIDEGTNA-EITYLLDS--GEPATKFQIDPRTGVVTTLQELDY----------- 333
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E Y+ V A DNG+P + I + D ND++P+
Sbjct: 334 --------------EESDNYYVNVQAHDNGSPIQYGRAYITINLVDENDHDPV 372
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D NG I+Y I+ R +F ID TG V LD E T
Sbjct: 3074 FTVVATDRDSGVNG-EIRYSIVGGDDYR-QFYIDPRTGSVTVAAVLD-------YETTPT 3124
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A DR RE + +TV + D+NDN+PMFD Y
Sbjct: 3125 YHLNISARDRGLLYRENFVILTV------------------DLTDVNDNDPMFDPATY 3164
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR E + +T+ A D+G P + I V DIND+EP+F+R +Y
Sbjct: 441 RSLDR---EITDQYNLTMRATDHGNPPRRTIANLIIYVNDINDHEPVFERTRY 490
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D+D N ++Y I + E KF ID +G + LDR E E +
Sbjct: 1240 VRVSASDMDY-GNNALVRYTITEGNDE-GKFLIDSSSGQIMLAQLLDR---EVEDFYSLL 1294
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D+R A ++P LS C + I+V D NDNEP+F
Sbjct: 1295 VDVRDSA--SENP-------------------LSSQCRVNISVLDENDNEPVF 1326
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A DVD +NG ++Y I+ + +I+ TG
Sbjct: 2124 VQVVAADVDEGTNG-VVRYSIVSGNTDN-DLAINAVTG---------------------- 2159
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R+ D ER + V A D GT L T+ ITV D+ND P+F
Sbjct: 2160 ---RISVARLIDHERTTGYNLVVRARDQGTSPLEALATVTITVTDVNDYVPLF 2209
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY--ITTDIRVQALDRD-DPER 75
YR I P + A G+V T+ A D D +Y I D V L R D E+
Sbjct: 1757 YRDISIPEDLAS------GGLVTTVVANDADVGSNAVVLYSIIAGDDGVIILRRPLDYEQ 1810
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +TV A D G + + T+ + V+D+NDN P+FD +Y
Sbjct: 1811 TQHYVLTVQARDGG--GRASSVTVYVNVKDLNDNPPVFDPDRY 1851
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E + + A+D G+P + I+V D NDN P+FD+ +Y
Sbjct: 224 QNLDR---EIRSSYQLNISAQDGGSPPRYGYLLVNISVRDSNDNPPIFDQSEY 273
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D+D NG + Y+I + + KF+I ++G + T LDR E+ +
Sbjct: 719 VQVSASDLDAGLNG-RVTYQITRGNPD-GKFTISPQSGQITTTAELDR-------EVRAS 769
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
+ V A D GT Q S + T+ +TV DI DN P F + Y
Sbjct: 770 YQLEVTARD-------------------GTGQSSASPATIDVTVVDIQDNPPEFSQPGY 809
>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
Length = 4656
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N Y + +R FS+++ TGIV LD
Sbjct: 3364 VRVMATSRDTGVNADV--YYSLVGGDDREDFSVNRSTGIVSIARPLDY------------ 3409
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER KE Y+TV A D G+P LSD T+ IT+ D NDN P+F + Y
Sbjct: 3410 -------------ERRKEYYLTVQAVDGGSPPLSDHATINITIMDSNDNPPVFSQTSY 3454
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD DPP + Y I+ G +A FSID +TG++++ LDR
Sbjct: 1127 LSAAATDADPPGRDSRLAYYIVAGSG-KAHFSID-DTGVIRSQTPLDR------------ 1172
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++TV A+D+G + I VED+ND P ++ +Y
Sbjct: 1173 -------------ETTAHYWLTVCAQDHGLVPRHSCVEVYIEVEDVNDMSPWPEQAEY 1217
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 45/119 (37%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP----GERAKFSIDKETGIVKTLYALDRDDPEREKE 56
++V ATD D NG P GE F++D TG V LDR
Sbjct: 2418 LRVRATDADAGDNGNVTYSLSAWGPEGETGEELAFAVDPATGEVSVAGQLDR-------- 2469
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ER ++ V A D G PQL + ITVED+ND P +R
Sbjct: 2470 -----------------ERRTAHHLLVTATDGGRPQLLTTAHLFITVEDVNDCSPRMER 2511
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D ERE E Y+ + D G PQ S + + +TV D+NDN P F++
Sbjct: 855 DRERESEYYLNITVYDLGHPQRSASRLLPVTVLDVNDNPPKFEK 898
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG + Y I + + F+ID +TG + LDR+ K Y+
Sbjct: 3469 VQVIADDADAGTNG-RVTYSIARGDPDNC-FTIDADTGYISVSSRLDRE----SKPAYV- 3521
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D G P L + + V D NDN P+F++ Y
Sbjct: 3522 --------------------LEVRARDRGLPALEATAVVNVEVLDANDNPPLFEKTNY 3559
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y ++ P E F + ++GI+ ALDR
Sbjct: 3262 KVHATDDDLGENR-LIRYSFVE-PTE--AFELTADSGIITLRTALDR------------- 3304
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P S T+++TV D+NDN P F+ Y
Sbjct: 3305 ------------ETRAEHRLLVRASDAGQPPRSATSTVRLTVADVNDNPPEFEFQHY 3349
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A D G P S T+ IT+ DINDN P+F R Y
Sbjct: 392 LTLKATDAGKPPRSSYLTLPITLVDINDNSPVFSREIY 429
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD DP G +QY ++ R++ FSID +G V T LDR+D R
Sbjct: 357 VTATDPDP-GEAGRLQYSMVALQNSRSQDLFSIDPASGEVTTQEVLDREDMNRH------ 409
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG+P S T++I + D+ND++P F+ Y
Sbjct: 410 -------------------FFRVTARDNGSPPRSATATLQIDILDMNDHDPEFEENSY 448
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N I+Y II G F I + G++ T ALDR+ T
Sbjct: 463 LTVRATDQDIGPNS-DIRYSIINPSGTNTAFQISRRDGVITTTEALDRE---------TT 512
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R++ V A D GTP + + ITV D NDNEP F++ Y
Sbjct: 513 ASYRLE----------------VRASDQGTPPRTSDVVVTITVLDENDNEPQFEQQSY 554
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D +NG I+Y F ID+ +GI++T LDR
Sbjct: 984 QISATDADSGTNG-QIRYTFTGGDNGEDAFVIDERSGIIRTDKRLDR------------- 1029
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + AED G P+ + +T+ED+NDN P F
Sbjct: 1030 ------------ELIPVYNLVAYAEDQGQPEQKTPVDIIVTIEDVNDNAPQF 1069
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y + P R F ID +TG + T LDR E +
Sbjct: 674 IHIQAIDADSGSNA-ELTYSLANVPA-RMPFEIDGDTGWIVTNAELDR-------EAHAI 724
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D VQA D+ G+P + A + I + D+NDN P+F+
Sbjct: 725 YDFNVQAADQ------------------GSPARTAAARVSINILDVNDNAPVFN 760
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +N I+Y +I + F+ID TG + + LD + R + I
Sbjct: 571 VAATDPDEGTNS-QIRYSLIGG-NSQGHFTIDSATGDISVITNLDFESTPRYRLI----- 623
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V A+D+G P + + + ++V D+ND++P F
Sbjct: 624 --------------------VKAQDSGRPSMWSSVVLTVSVIDVNDHDPQF 654
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ R D E + ++V A D+G P D + I V D+NDN P+F
Sbjct: 915 IKTKQRLDHEAQASFAVSVTATDHGVPSKFDESYVDIIVNDVNDNAPVF 963
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D +NG I Y II E FS+D TG +I++
Sbjct: 2005 LRVQAASRDTEANG-EISYGIISG-NEHGLFSVDPRTG-----------------DIFV- 2044
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q LD E E YITV A D G+P LSD T+ I + D+NDN P+F + Y
Sbjct: 2045 ----IQPLDY---EASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVY 2095
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + +++++ GE + F +ID++TG + T LD ++ +
Sbjct: 1057 LQVDAKDSDT-GNNQEVFFQLVEEKGESSDFFTIDRDTGTISTAQLLDYEEIRQH----- 1110
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++RV+A+DR G P LS + I V D+NDN P F + Y
Sbjct: 1111 --ELRVRAVDR------------------GVPALSSEVIVTIDVTDLNDNAPEFTQQTY 1149
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A+D D +NG I + E F+++ ETG V TL LDR
Sbjct: 1583 IQVRASDQDSGTNGQVIYSLDARQSSEEISELFAVNSETGWVTTLKELDR---------- 1632
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMF 113
E+ + I V+A D G Q + +++TV D+NDN P F
Sbjct: 1633 ---------------EKMQRYTIAVLATDQGDRIQHATGTRVEVTVADVNDNPPRF 1673
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D SN I Y + A E F+ID +TG +KTL LDR++ E +
Sbjct: 1799 LQVSASDADIRSNA-QIFYELQGAGSEL--FTIDSDTGELKTLQPLDREEQEEHR----- 1850
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++A+D E +I+ + VED+NDN P F
Sbjct: 1851 --FKMRAVDGGGRYCEADIH--------------------VVVEDVNDNLPQF 1881
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A DVD N I + A G FSID++TG++ LDR E+ T ++R
Sbjct: 1905 ANDVDVGPNSNIIYSLLDSADG---FFSIDEQTGVISLERPLDR-------ELQSTYELR 1954
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G P+LS C + ++V DINDN P+F+ +Y
Sbjct: 1955 A------------------LASDQGLPRLSSVCQVVVSVLDINDNPPVFEHREY 1990
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D N I Y+I++ P F+ID TG ++ ALD
Sbjct: 546 LVVRASDADGDQNAMLI-YQIVE-PFAHNYFAIDSNTGAIRITTALDY------------ 591
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + TV D G P+L +T+E D+ND P+F + Y
Sbjct: 592 -------------EERNTFHFTVQVHDLGIPRLFAETAANVTIEVTDVNDCPPVFSQKTY 638
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G I+Y+I+ + KFS++ E G + TL +LDR++
Sbjct: 1279 GQIRYQIVNDFA-KDKFSVN-ENGEIFTLESLDREN-----------------------N 1313
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK + I+++A D G C + + + DINDN P F Y
Sbjct: 1314 MEKVVPISLVARDGGGK--VGFCVVNVILTDINDNAPQFRAADY 1355
>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
Length = 3293
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GER FS+D +TG++ TL ALDR
Sbjct: 1664 LTLRATDSDLGANG-QVTYGGIS--GER--FSLDPDTGVLTTLQALDR------------ 1706
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E+EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1707 -------------EEEEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTF 1746
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 488 VRVMAQDPDQGTNG-QVTYSL--APGAHNRWFSIDPTSGIITTAASLDY----------- 533
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 534 --------------ELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 578
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1121 RVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1166
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1167 ------------ERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 1206
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + I+V DIND P F + +Y
Sbjct: 1599 VRSLDR---EQRAEHVLTVVASDHGSPPRSATQLLTISVADINDEAPAFQQQEY 1649
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2556 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2602
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L T + V D+NDN P FDR Y
Sbjct: 424 RLDREERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPAFDRQLY 472
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2186 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2236
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2237 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2270
>gi|431892705|gb|ELK03138.1| Protocadherin-24 [Pteropus alecto]
Length = 1271
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D P +N + + ++ +P FS+D +TG+++ L LDR+
Sbjct: 637 DDQPGTNNSRLYFSLLPSPYSH-NFSVDPDTGLLRNLGPLDREAI--------------- 680
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP +I +TV D G P LS + ITVEDINDN P+F ++ Y
Sbjct: 681 -----DPALGGQIVLTVRVSDCGVPVLSTEVNVTITVEDINDNLPVFTQLSY 727
>gi|47227083|emb|CAG00445.1| unnamed protein product [Tetraodon nigroviridis]
Length = 686
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG ++YR++K+ + F ID TGI+ T ALD
Sbjct: 445 LQVTARDKDQGPNGD-VRYRLLKSKNSHSDWFLIDPVTGIITTATALDF----------- 492
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA DNG P LS + I ++D+NDN P+F Y
Sbjct: 493 --------------ESEPAPSVTVIAMDNGRPPLSSTVKVDIVLQDVNDNTPVFSSNFY 537
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIY-ITV 83
GE A ++ E G K +AL D IY+ I V Q LDR+ E++ Y + V
Sbjct: 349 GEYANVNVSLEGGDGK--FALTTKD----SIIYL---IYVDQELDRE----ERDSYDLRV 395
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 396 MATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAY 430
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 74 EREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK T++ E D G+P+ + T+++TV DIND+ P+F++ +Y
Sbjct: 167 DREKRSSYTLVIEAFDGGSPKRIGSMTLEVTVTDINDHAPVFNQSRY 213
>gi|268557966|ref|XP_002636973.1| Hypothetical protein CBG09454 [Caenorhabditis briggsae]
Length = 2592
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V+A D D NG I+Y I + F ID+++G++KT LDR+ R
Sbjct: 499 RVYAIDEDSGPNG-IIRYSIEGS----EDFIIDEDSGVIKTTKLLDRETTARYS------ 547
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L+ + TM + ++DINDN P+FD+ +Y
Sbjct: 548 -------------------LKVTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEY 585
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D SNG + Y + ++ A F +D+ +G ++ LDR
Sbjct: 819 LQVSAIDADIGSNG-IVDYFLNESSSSPAIHLFRLDRTSGTLRVSSKLDR---------- 867
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I + + A D GTP LS + + +T+ D+NDN P F+++ Y
Sbjct: 868 ---------------EQFAVILLPIFARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSY 912
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG ++Y + + G+ +I+ ++G+++T LDR
Sbjct: 290 LSVFARDLDSEENG-EVEYSLGEGNGKNL-LAINSKSGVIQTAAPLDR------------ 335
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + VIA D G P+ ++ITV D+NDN P+F Y
Sbjct: 336 -------------ETLSLIRLDVIASDKGIPKKESKALVEITVLDVNDNAPVFASDSY 380
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 62 DIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DI V + LDR+D + V A D+ TP L+ + +++ ++DINDN P F Y
Sbjct: 750 DISVASDLDRED---RATFSVIVTASDHATPPLNTSTQIEVILDDINDNAPQFTSSSY 804
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PS +QY I+ + + F+ID G +K LDR
Sbjct: 3284 LAVMAEDFDGPSYD-HVQYSIVDG-NQGSPFTIDPLRGELKVARQLDR------------ 3329
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER +TV+A DNG P LS + T+ I + D+NDN P+F + Y
Sbjct: 3330 -------------ERTSGYTLTVVASDNGVPPLSSSATINIDISDVNDNPPLFSQANY 3374
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D +N I Y II E FS+D +G + + LD
Sbjct: 3179 LRVQAASRDKEANA-EISYSIISG-NEHGMFSVDARSGDIFVIEPLDY------------ 3224
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E YIT+ A D G+P LSD T+ I + D+NDN P+F + Y
Sbjct: 3225 -------------ETSHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVY 3269
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D N + I A G FS+D+ +G++ LDR E+ ++
Sbjct: 3079 ANDADAGLNSDILYSLINSADG---SFSVDENSGVISLERPLDR-------EVQSVYELT 3128
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
QA+DR G+P+LS CT+ +++ DINDN P+F+ +Y
Sbjct: 3129 AQAIDR------------------GSPRLSSLCTVTVSILDINDNPPVFEHREY 3164
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N I Y+++ G+ + F ID++ GI+ LD +D ++ K
Sbjct: 2231 LQVEAKDSDT-GNNQEIFYQLVDEKGKSSNYFIIDRDKGIISLAQVLDHEDIQQHK---- 2285
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R + +D G P LS T+ I V D+NDN PMF Y
Sbjct: 2286 ---LRARVVD------------------GGVPALSSEVTVTIDVTDLNDNAPMFTEFIY 2323
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N G I+Y I+ G F I++ TG+V LDR E+ + T
Sbjct: 840 IQVDATDKDQ-GNNGIIKYSIL---GGTDHFEINELTGVVTVRRPLDR-----ERFPFYT 890
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++ A D+ E PQL +KIT+ED+NDN P F
Sbjct: 891 --LKIAARDQAVSE----------------PQLVSTVPLKITLEDVNDNPPKF 925
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 34/119 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-----FSIDKETGIVKTLYALDRDDPEREK 55
+QV ATD+D +N I Y + P + ++ FS++ ETG V TL LDR
Sbjct: 2757 VQVRATDLDSGTNSHVI-YSL--DPKQNSQEIFELFSVNSETGWVTTLKELDR------- 2806
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMF 113
E+ + I V+A D G T Q T+++TV D+NDN P F
Sbjct: 2807 ------------------EKMDKYTIAVLATDQGDTIQHISGTTVEVTVADVNDNPPRF 2847
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I + + E F ID +TG +KT LDR+ E +
Sbjct: 2973 LQVSATDADIRSNA-QISFELQGVGAEL--FIIDSDTGELKTSRPLDREKQEEHR----- 3024
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+V+A+D E +I+ITV ED+NDN P+F
Sbjct: 3025 --FKVRAVDGGGRYCEADIHITV--------------------EDVNDNPPLF 3055
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D +G ++Y I G F+I++ETG+++T LD
Sbjct: 1052 MKVSAEDEDTGRDG-EVRYSIRDGSG-LGIFTIEEETGVIRTQELLDH------------ 1097
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E ++TV A D G LS + I V+D+NDN P
Sbjct: 1098 -------------EATPHYWLTVYAMDRGVVPLSAFVEVYIQVQDVNDNAP 1135
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + +I + +F +D ETG + ALDR E + T
Sbjct: 735 VHLSATDSDSGFNGKLV--YVISGGDKENRFIVDMETGWLLVYSALDR-----EATDHYT 787
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I V L G PQ S + + + + D NDN P F + Y
Sbjct: 788 LNITVYDL--------------------GVPQKSSSRLLDVKILDANDNSPQFLQDSY 825
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +HA+D D N I Y+I++ P F+ID TG ++ LD + E+ ++
Sbjct: 1720 LVIHASDADCDQNARLI-YQIVE-PYAHNYFAIDSSTGAIRITTTLDYE----ERSVF-- 1771
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
+ TV D G P+L A + I V D+ND P F + Y
Sbjct: 1772 -------------------HFTVQVHDLGMPRLFAETAANVTINVIDVNDCSPSFTQEVY 1812
>gi|27448222|gb|AAO13808.1|AF383875_1 protocadherin-11 [Mus musculus]
Length = 435
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 83 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 126
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 127 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 171
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +E I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 21 DFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVF 62
>gi|432093059|gb|ELK25349.1| Protein dachsous [Myotis davidii]
Length = 510
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 38/131 (29%)
Query: 1 MQVHATDVDPPSNG-GTIQYRIIKAP------GERAK------FSIDKETGIVKTLYALD 47
+ V A+D D G + Y ++ P +R + F+I+ ETG++ T +LD
Sbjct: 373 LWVSASDADEAGTGHAKLHYELVHLPERCSPEAQRPRAECAPSFTINPETGLISTTRSLD 432
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
R E ++ + + V+A+D G P LS C + ITV D+N
Sbjct: 433 R-------------------------EVQEAVELRVVAQDLGEPPLSATCLVSITVNDVN 467
Query: 108 DNEPMFDRVQY 118
DNEP+F R Y
Sbjct: 468 DNEPIFWRQVY 478
>gi|307197256|gb|EFN78561.1| Protein dachsous [Harpegnathos saltator]
Length = 537
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N ++Y ++ + F+ID++TG++ T+ +D
Sbjct: 434 LKVTATDLDEGANSA-VRYSLLNT----SWFAIDEKTGLITTVTHVDC------------ 476
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A D+G P LS + T+ +T+ D+NDNEP+F+R Y
Sbjct: 477 -------------EADPAPVLVVVATDSGRPPLSSSATVCVTIHDLNDNEPIFERPLY 521
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + A D GTP L + + +TV+D+NDN P F++ +Y
Sbjct: 153 SLDR---EARSRYHLVIEALDGGTPPLRSSLRVNVTVQDVNDNPPTFNQTRY 201
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
R+ IY+ R LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P
Sbjct: 359 RDNIIYLVVVER--PLDRE----EKPVYELSVEATDTGTPPLRAVRTFRLLVTDVNDNAP 412
Query: 112 MFDRVQY 118
F++ Y
Sbjct: 413 KFEQETY 419
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D N I+Y I + +R + F ID ETG+V LD + ER +
Sbjct: 216 LTVNATDADAGENS-RIEYSINRRQSDREEMFRIDAETGLVYVNKVLDFESKERHE---- 270
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 271 ---------------------LVIVARDCGAQPLEASAFLSVRVTDVNDNQP 301
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG + Y+++ A G F+++ + G+V L LD ++ R I
Sbjct: 312 ATDEDEGKNG-MVTYQLVSATGPANTFAVNSQHGLVTLLRLLDYENLVRHTVI------- 363
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ A+D+G PQLS T+ + V+DINDN P+F+ Y
Sbjct: 364 ------------------ISAQDSGNPQLSANLTLVVDVQDINDNSPVFEHDTY 399
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG I Y I + KF+ID TG
Sbjct: 1167 VTATDKDIGANG-VITYSI-SSGNNGNKFTIDATTG-----------------------K 1201
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+ + LDR E + + +T++A D+G+P L AC + + VED NDN+P+FD Y
Sbjct: 1202 LTAKTLDR---ETQAKYDLTIVAYDHGSPVALQGACNLTVMVEDQNDNDPVFDTGHY 1255
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG-ERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D N I YR++ F + TG V ALDR+ + K
Sbjct: 414 LEVQAIDKDT-GNNARITYRVVSENNTNEEHFKVQPSTGWVYLAKALDRESIAKHK---- 468
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+IA DNG P LS ++ + V D NDN+P F + Y
Sbjct: 469 ---------------------MTIIATDNGIPPLSTTASLIVNVVDANDNDPAFSQASY 506
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ E K +TVIA D G PQ++ T++I V DINDN+P F
Sbjct: 1633 LDREIRETYK---LTVIATDEGNPQMTGTATLRINVVDINDNQPTF 1675
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 27/84 (32%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNG 89
F ID TG++KT LD + E+ IY +TV A D G
Sbjct: 646 FVIDSNTGVIKTSTVLDHE--------------------------ERSIYRLTVAATDGG 679
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
P +K+ V D+NDN P F
Sbjct: 680 NPPRQTVRQLKVEVLDLNDNRPTF 703
>gi|194580182|gb|ACF75932.1| protocadherin X-linked 11 [Mus musculus]
Length = 553
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 197 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 240
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 241 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 285
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 111 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 169
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 170 NDNAPVF 176
>gi|326436675|gb|EGD82245.1| FAT3 protein [Salpingoeca sp. ATCC 50818]
Length = 7553
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 60 TTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T ++R Q LDR E + E I V+A D GTP LS T+ I VEDINDN P+F R Y
Sbjct: 6038 TGELRTQRVLDR---ETQDEYQIVVVAADAGTPSLSSTVTVTIEVEDINDNRPLFTRSSY 6094
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
RV + D E + + +T +A D GTP LS T+ +T+ D+NDN P F Y
Sbjct: 471 RVHVVGVLDRESQSTVSVTFVASDTGTPPLSTQITLVLTLRDVNDNRPKFASKAY 525
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ +TTD+R + D E+ +T++AEDNG+P LS + +TV +N+ P+F+
Sbjct: 1534 RKFKLTTDLRFELQRTIDREQYSSFNVTLVAEDNGSPPLSSVAHVIVTVFGVNEFPPVFE 1593
Query: 115 RVQY 118
+ Y
Sbjct: 1594 KDLY 1597
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E+ + ++A D+GTP T I + DINDN P+F + Y
Sbjct: 1446 DYEQLHELTLVIVARDHGTPSRMQMATTTININDINDNRPIFSQDTY 1492
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 25/110 (22%)
Query: 3 VHATDVDPPSNGG-TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D N T P KFS++ TG+V+ LD D IT
Sbjct: 4123 VSATDGDIGDNARITFSLANFSDPSVANKFSVNATTGVVRVAEPLDHD----AGPALITF 4178
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D V+A D+GTP S M++ V D+NDN P
Sbjct: 4179 D--------------------VVASDHGTPPRSARFAMQLQVLDVNDNAP 4208
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D N I Y + GE A +F+I+ +TG + T LDR
Sbjct: 826 VSATDSDVGKNA-QITYSLGTDGGESASEFTINPQTGAITTTRTLDR------------- 871
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 872 ------------ELVPGYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFESPQY 916
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y ++ G+ A F+ID TG+++T LDR+ +YI
Sbjct: 931 LRVSATDADTDLNG-RVRY-ALEDDGDGA-FAIDSSTGVIRTAKPLDRE----SVAMYI- 982
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ +A D G+P LS + I ++D+ND+ P F+
Sbjct: 983 --------------------LKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFE 1016
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
+++ A D D +N I+Y I A E +++ ETG + T LDR+ R +
Sbjct: 610 LRIQAYDADEGANA-QIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
TVIA D+G S + T+ +TV D+NDN+P FD
Sbjct: 669 -------------------------FTVIAADSGEVPKSASATVILTVTDVNDNDPYFDP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID G V + LD
Sbjct: 506 RIRATDADS-GNNAAVRYAIIGGNTQNT-FSIDSMIGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRF 590
>gi|47227082|emb|CAG00444.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2270
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI +A +FS++ TG + L ALDR+
Sbjct: 1028 LYVMARDEDEGENG-RVSYRI-QAGNTAGRFSLNPNTGSLSILKALDRE----------- 1074
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ +T++AED+G PQLS + + + V D+ND P+F R ++
Sbjct: 1075 ---------------EQEVFNLTIVAEDHGIPQLSTSQVLSVRVIDVNDEAPVFQRAEF 1118
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD----------D 50
++V A D D SNG + Y + G F I+ TG++ T LD + D
Sbjct: 1133 LKVTAVDRDQGSNG-HVTYGGVTEEG----FVINPVTGVITTTKELDTEAQDHYTLTAGD 1187
Query: 51 PEREKEIYITTDI--RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
P+ + ++ +T + LDR E + E + V+A D G+P LS +++ V D+ND
Sbjct: 1188 PDGDFHLHPSTGALSTSRGLDR---ETKAEYTLEVVASDRGSPALSTTVMVQVQVMDVND 1244
Query: 109 NEPMFD 114
N P+F+
Sbjct: 1245 NSPIFN 1250
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
ALDR E + + V+ +D GTP S T ITV D NDN P F +
Sbjct: 639 ALDR---EHQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPTFSHTR 686
>gi|48147006|emb|CAD92447.1| protocadherin [Mus musculus]
Length = 1177
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF 249
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|41223264|emb|CAD92431.1| protocadherin [Homo sapiens]
Length = 831
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 306 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 245 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 286
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|41223270|emb|CAD92434.1| protocadherin [Homo sapiens]
Length = 787
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 306 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 245 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 286
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|117558501|gb|AAI26931.1| Pcdh11x protein [Mus musculus]
Length = 1128
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF 249
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|148701503|gb|EDL33450.1| mCG51196 [Mus musculus]
Length = 1018
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF 249
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|328710951|ref|XP_003244410.1| PREDICTED: protocadherin-like wing polarity protein stan-like
isoform 2 [Acyrthosiphon pisum]
Length = 3165
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N I Y + G+ ++F+I+ ++G + T ALDR
Sbjct: 848 VSATDGDVGQNA-LITYSLASGYGDASEFTINAQSGAIVTTKALDR-------------- 892
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A D G P LSD ++I++ DINDN P F Y
Sbjct: 893 -----------EVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASY 937
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP-----GERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D N ++YRI E ++D+++G V T + LDR
Sbjct: 632 VRVQAYDADEGENAA-LKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDR------- 683
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + V+AED G P S ++ +T++D+NDNEP+F
Sbjct: 684 ------------------ETNPKYQFQVVAEDGGDPPKSATASVVVTIQDVNDNEPIFHP 725
Query: 116 VQY 118
QY
Sbjct: 726 KQY 728
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG I+Y + G A F ID +GI++T +LDR
Sbjct: 952 LQVSASDADSGLNG-RIKYAL--DDGVEA-FVIDPTSGILRTAASLDR------------ 995
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + I V A D G+P LS A + I +ED+ND+ P+F+
Sbjct: 996 -------------ESIPQYNIHVFAIDKGSPSLSTAVPVTIRIEDVNDSPPVFE 1036
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA + P +N Q I A F+ID +G+V TL +LDR+ D
Sbjct: 303 VHARSMPPNNNPIEYQMSPIIDTRSHAMFTIDSNSGLVTTLVSLDRE----------FMD 352
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ Y+ VIA D + + T+++ V D ND+ P+F+
Sbjct: 353 VH---------------YLRVIAIDTSSHPSTATTTLQVNVVDANDHSPVFE 389
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N ++Y II + +FSID + G V + +LD
Sbjct: 529 IKATDADQGLNA-VVRYAIIGG-NTQGQFSIDSQNGEVSLVKSLDY-------------- 572
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + + A+D G P S+ + + V+D+NDN P F
Sbjct: 573 -----------EAMRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRF 612
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ++EK ++V A D+G LSD T+ + V D N+ P+FD Y
Sbjct: 787 DYKQEKRFILSVTATDSGG--LSDTATIYVNVTDANNFAPIFDNAPY 831
>gi|14589946|ref|NP_116755.1| protocadherin-11 Y-linked isoform c [Homo sapiens]
gi|74762719|sp|Q9BZA8.1|PC11Y_HUMAN RecName: Full=Protocadherin-11 Y-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the Y chromosome;
Short=PCDH-Y; AltName: Full=Protocadherin prostate
cancer; Short=Protocadherin-PC; AltName:
Full=Protocadherin-22; Flags: Precursor
gi|13161060|gb|AAK13469.1|AF332217_1 protocadherin 11 [Homo sapiens]
gi|157169592|gb|AAI52898.1| Protocadherin 11 Y-linked [synthetic construct]
gi|261857964|dbj|BAI45504.1| protocadherin 11 Y-linked [synthetic construct]
Length = 1340
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 518 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 562
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 563 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 607
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 239 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 281
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 433 DHEIPFRLRPVF-SNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 491
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 492 NDNAPVF 498
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 648 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 682
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 683 VSRSSSAKVTINVVDVNDNKPVF 705
>gi|41223266|emb|CAD92432.1| protocadherin [Homo sapiens]
Length = 841
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 306 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 245 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 286
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|189234730|ref|XP_973752.2| PREDICTED: similar to fat2 CG7749-PA [Tribolium castaneum]
Length = 4676
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N + Y II E KF+I+ +TG++ LD
Sbjct: 3285 VKVLATSKDTGVNA-DVTYSIIGG-NEHKKFAINNKTGVISIADMLDY------------ 3330
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER K+ ++T+ A D G P LS+ T+ ITV D NDN P+F ++ Y
Sbjct: 3331 -------------ERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSY 3375
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV+ATD DPP I+Y I G FSID E GI++TL LD
Sbjct: 1085 MQVNATDADPPGGDSNIEYSIRGGDG-IGIFSIDNE-GIIRTLAVLDI------------ 1130
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++TV A+D+G L + + I V + NDN P+ D Y
Sbjct: 1131 -------------ETKSHFWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVY 1175
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG + Y II+ +R +F ID ++G V LDR
Sbjct: 3390 LQVIATDLDSDRNG-KVTYSIIRG-DDREQFEIDPDSGYVSVAEELDR------------ 3435
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V+A DNG P LS + I + D NDN P+F + Y
Sbjct: 3436 -------------ETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNY 3480
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y I + K + D +GIV LDR EI
Sbjct: 3182 KIHATDADIGINR-KIKYAFIDSFNNHFKMASD--SGIVTLAKPLDR-------EIRAVY 3231
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ VQA+D+ GTPQLS T+ + V+DINDN P F Y
Sbjct: 3232 NLTVQAVDQ------------------GTPQLSSVSTLTVNVQDINDNPPEFANKYY 3270
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 34 DKETGIVKTL-YALDRDDPEREKEIYITTDIRV----QALDRDDPEREKEIYITVIAEDN 88
D +TGI K + Y++ D + YI + V QALD ++ + V+A+D
Sbjct: 2355 DNDTGINKKISYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSH---HFIVVAKDL 2411
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
G P LS + +TV D+NDN P F++ Y
Sbjct: 2412 GVPSLSSTAHVWLTVLDMNDNPPKFEQTSY 2441
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG I I + ++F +D +TG +K + LDR
Sbjct: 765 VKLKARDRDLGYNGKLIYG--ISGGDKHSQFCVDMDTGELKVIGYLDR------------ 810
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E ++ + D G PQ S + + ITV D+NDN P+F+R
Sbjct: 811 -------------ERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFER 852
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A+D D N I Y+I ER FSI+ TG++ T
Sbjct: 1190 LQIRASDKDKDPNQ-KITYKITSGSPERF-FSINSSTGLITT------------------ 1229
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E E + V DNG+P LS + + ++DINDN P F+++ Y
Sbjct: 1230 ---TSRKLDR---ETLDEHILEVQISDNGSPPLSSTTYVVVKIDDINDNAPEFEQISY 1281
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 28/115 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA D D N I Y I A + F ID +GI+KT LD + RE Y+
Sbjct: 503 VHAKDRDRGENA-YISYLI--ANINKVPFEIDHFSGIIKTTSLLDYESMRRE---YV--- 553
Query: 63 IRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+RV+A D P R+ E+ +TV V+D+NDN P F++V
Sbjct: 554 LRVRASDWGLPYRRQTEMQLTV------------------KVQDVNDNRPQFEKV 590
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +N ++Y G+ F+ID TG + TL LD++
Sbjct: 2869 LKVVAHDEDQGANS-EVRYSFSHDLGDMMNIFAIDSHTGWISTLVKLDKE---------- 2917
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ E + Y+T A DNGTP+ S T+ + ++D ND+ +F + Y
Sbjct: 2918 -------------AKMEYKFYVT--ATDNGTPKHSARTTVIVRLKDYNDSPTLFKKRFY 2961
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ TD D N + I E +F+I+ ETG++ T LD + K+ Y
Sbjct: 394 IRLKVTDADEGRNAQV--FLEIVGGNEGGEFNINPETGMLYTAVPLDAE----SKQFYSL 447
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
T V A+D+ + GT + S A +KI VED NDN+P+FD
Sbjct: 448 T---VSAIDQGNA---------------GTRKQSSA-KVKIYVEDTNDNDPIFD 482
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +ATD D N + Y +I + F++D+ TG++ LDR+ +++Y
Sbjct: 870 FRANATDADAGDNA-KVTYSLIT---DTRDFAVDRTTGVLAVSNTLDRE----RQDLY-- 919
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D DN P L ++I+++DINDN P F Y
Sbjct: 920 -ELRIRATDGGGK-----------GPDN--PPLYSEALVRISIDDINDNAPKFSLPAY 963
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG ++Y ++ G F+ID +TG++ TL DR
Sbjct: 491 LRVEATDADEGTNG-EVKYGLMHRDGALPMFNIDPDTGVLTTLQIFDR------------ 537
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E ITV A D L C + + + D+NDN P F+ Y
Sbjct: 538 -------------EKQREHPITVTATDQAAEPLIGICQITVVILDVNDNNPRFENSHY 582
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +GG I+Y + G F+ID+ TG + + LDR++
Sbjct: 1027 LQVVANDPDSALDGGDIRYSL-HGLGADDVFAIDENTGSIYSQKILDREE---------- 1075
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+AL R V+A D G L+ + I + DINDN P+F
Sbjct: 1076 -----RALWR----------FVVLATDEGGEGLTGFADVIINIWDINDNAPVF 1113
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV ATD+D NG I Y ++ E F +D +TG + T DR+ +K Y+
Sbjct: 809 FQVSATDLDLGQNG-EITYSLLPDRSEDYTFFHLDSKTGSIYTASVFDRE----KKASYL 863
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V++ D + R + +G P SD +++ + D+NDN+P F + Y
Sbjct: 864 ---LEVKSTDGSESSRPGK---------HGQPN-SDTAYVRVFISDVNDNKPSFTKNVY 909
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ AL D E++K +I ++ D+G+P +S + IT+ D NDN
Sbjct: 1507 ITALRSFDREKQKMFHIPIVIADSGSPPMSSTNVLAITIGDENDNS 1552
>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
Length = 4557
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ ER KF I+ +TG + + ALD
Sbjct: 3256 LAVFATSKDIGTNA-EITY-LIRSGNERGKFKINLKTGGISVIEALDY------------ 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K+ Y+ V A+D GTP LS T+ I + D+NDN P F++ Y
Sbjct: 3302 -------------EMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVY 3346
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD P NG Q R G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSPPNG---QIRFSIVSGDRDNEFAVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLIQATDSGVPAMSSTVTVNIDISDVNDNGPVFTPANY 3451
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A+D D +N +QY+I++ F ID +G++ T LD + ++
Sbjct: 2307 LQVVASDADSENNK-IVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQST---- 2361
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG P +S + I V D+NDN P+F+++ Y
Sbjct: 2362 ---------------------LKVRATDNGFPPMSSEVLVNIYVTDMNDNPPVFNQLIY 2399
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ T LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVIYTADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I +ED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPL 1147
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D +NG + E+ FSID TG + TL LD
Sbjct: 2834 IQVKAIDKDWGANGQVTYALHSDSNAEKVMEVFSIDTNTGWISTLKDLDH---------- 2883
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQ 117
ER+ +V+A D G LS + +TV DINDN P+F
Sbjct: 2884 ---------------ERDPTFTFSVLASDLGEAFSLSSTTLVSVTVTDINDNAPVFGHEV 2928
Query: 118 Y 118
Y
Sbjct: 2929 Y 2929
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ + ++Y+
Sbjct: 746 LKIKAFDADSGFNGKVV--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----QTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGKPQKSSWRLLTINVEDANDNRPIFLQESY 836
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ ++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGNPQLTAESPAEVNIEVTDVNDNPPVFTQAVF 1888
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y + + G FS+D +GI+
Sbjct: 3152 RVQATDPDLGINRKVV-YSLADSAG--GYFSVDSSSGII--------------------- 3187
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
I Q LDR E + I+V A D + LS T+ ITV DINDN P+F+R Y
Sbjct: 3188 -ILEQPLDR---ELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDY 3241
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A FSI++ TG+++T LD PE + I
Sbjct: 492 LSVSASDKDKGENG-YITYSI--ASLNALPFSINQFTGVIRTTEELDFESSPENYRFI-- 546
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I + ++NDN P+F++V
Sbjct: 547 -----VRASDWGSPYRHESEVNVT------------------IRIGNVNDNSPLFEKV 581
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP G I+Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDP-GMYGQIRYAIINDFA-KDRFLIDNNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRESP-MEGDISIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFLTVEY 2605
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + Y ++ + +FSI+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGPNG-EVMYSVLT---DAQQFSINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D+ ++G Q S T+K+ ++D+ND P F Y
Sbjct: 901 -SLKIEARDK---------------SESGQQQFS-VVTLKVFLDDVNDCSPTFIPTSY 941
>gi|449284111|gb|EMC90692.1| Neural-cadherin [Columba livia]
Length = 2537
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++ G FSID +TG++ T + DR
Sbjct: 462 LQVEAHDADLGVNG-EVKYGLMHQDGASLGFSIDPDTGVITTTQSFDR------------ 508
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E ++V A D L C + + + D+NDN+P F+ +Y
Sbjct: 509 -------------EQQREYTLSVTATDQAQEPLIGVCQVTVLIADVNDNDPKFENSRY 553
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D +G + Y I+K A G+ F+I+ ETG++ T + DR+ ++ Y+
Sbjct: 780 VQVLAMDLDSGLHG-QVHYLILKDASGDYQFFTIEPETGVISTHASFDRE----KRASYL 834
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R +G P +D ++I V D+NDN P F R Y
Sbjct: 835 ---IEVQSQDSSESARPGV---------HGHPN-TDTAYVRIFVSDVNDNAPAFPRSVY 880
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 32 SIDKETGIVK--TLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
++D ++G+ + + L++ DP + + +D V D E + + VIA D G
Sbjct: 1331 AVDLDSGLNGRFSFHLLNKSDPC--GQFSVASDGWVVVAGLLDHETVAQYQLIVIATDMG 1388
Query: 90 TPQLSDACTMKITVEDINDNEPMFD 114
P L+ + T+ ++++DINDN P F+
Sbjct: 1389 QPPLTGSATVLVSLQDINDNGPEFE 1413
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D ++ I Y + G ++FSI++ TG
Sbjct: 998 LKVSATDPDQAADQNAINYSL-HGQGASSEFSINENTG---------------------- 1034
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ A R D E+ V+A D L+ + I V D+NDN P+F
Sbjct: 1035 ---EISANKRLDREKRSTWRFLVLATDERGEGLTGFADVIIEVRDVNDNAPLF 1084
>gi|424036683|ref|NP_001258738.1| protocadherin 11 X-linked isoform a precursor [Mus musculus]
Length = 1330
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF 249
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 25/84 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+ID ++G+++ + DR ER++ V AED G
Sbjct: 615 QFTIDPQSGVIRPNISFDR-------------------------ERQESYTFYVKAEDGG 649
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
S + I V D+NDN+P+F
Sbjct: 650 RVSRSSTARVTINVVDVNDNKPIF 673
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos
taurus]
Length = 3314
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID ++G+++T ALDR+ +R Y+ V A+D+G+
Sbjct: 374 FSIDPQSGLIRTEAALDRESMDRH-------------------------YLRVTAQDHGS 408
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P+LS + +TV D ND+ P+F++ QY
Sbjct: 409 PRLSATTMVAVTVADRNDHAPVFEQAQY 436
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 979 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1032
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1033 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1065
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 563 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 608
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 609 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 649
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 451 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAADAFEIDPRSGLISTSGRVDREHMESYEL 509
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 510 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 556
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 713 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 759
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 918 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 964
>gi|270002748|gb|EEZ99195.1| cadherin [Tribolium castaneum]
Length = 4637
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N + Y II E KF+I+ +TG++ LD
Sbjct: 3246 VKVLATSKDTGVNA-DVTYSIIGG-NEHKKFAINNKTGVISIADMLDY------------ 3291
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER K+ ++T+ A D G P LS+ T+ ITV D NDN P+F ++ Y
Sbjct: 3292 -------------ERAKDYFLTIQAVDGGIPPLSNVATVNITVTDCNDNAPVFSQLSY 3336
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV+ATD DPP I+Y I G FSID E GI++TL LD
Sbjct: 1085 MQVNATDADPPGGDSNIEYSIRGGDG-IGIFSIDNE-GIIRTLAVLDI------------ 1130
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++TV A+D+G L + + I V + NDN P+ D Y
Sbjct: 1131 -------------ETKSHFWLTVFAQDHGVVPLYSSVEVYIEVLNENDNVPLSDEAVY 1175
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG + Y II+ +R +F ID ++G V LDR
Sbjct: 3351 LQVIATDLDSDRNG-KVTYSIIRG-DDREQFEIDPDSGYVSVAEELDR------------ 3396
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V+A DNG P LS + I + D NDN P+F + Y
Sbjct: 3397 -------------ETTSNYVLEVLARDNGVPVLSRQTLLNIEISDANDNPPIFAQTNY 3441
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y I + K + D +GIV LDR EI
Sbjct: 3143 KIHATDADIGINR-KIKYAFIDSFNNHFKMASD--SGIVTLAKPLDR-------EIRAVY 3192
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ VQA+D+ GTPQLS T+ + V+DINDN P F Y
Sbjct: 3193 NLTVQAVDQ------------------GTPQLSSVSTLTVNVQDINDNPPEFANKYY 3231
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 34 DKETGIVKTL-YALDRDDPEREKEIYITTDIRV----QALDRDDPEREKEIYITVIAEDN 88
D +TGI K + Y++ D + YI + V QALD ++ + V+A+D
Sbjct: 2316 DNDTGINKKISYSIQNDSSNSSEYFYIDENEGVVYLKQALDHEEASSH---HFIVVAKDL 2372
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
G P LS + +TV D+NDN P F++ Y
Sbjct: 2373 GVPSLSSTAHVWLTVLDMNDNPPKFEQTSY 2402
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG I I + ++F +D +TG +K + LDR
Sbjct: 765 VKLKARDRDLGYNGKLIYG--ISGGDKHSQFCVDMDTGELKVIGYLDR------------ 810
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E ++ + D G PQ S + + ITV D+NDN P+F+R
Sbjct: 811 -------------ERESEYFLNITLYDLGKPQKSASRMLPITVLDVNDNAPVFER 852
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A+D D N I Y+I ER FSI+ TG++ T
Sbjct: 1190 LQIRASDKDKDPNQ-KITYKITSGSPERF-FSINSSTGLITT------------------ 1229
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E E + V DNG+P LS + + ++DINDN P F+++ Y
Sbjct: 1230 ---TSRKLDR---ETLDEHILEVQISDNGSPPLSSTTYVVVKIDDINDNAPEFEQISY 1281
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 28/115 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA D D N I Y I A + F ID +GI+KT LD + RE Y+
Sbjct: 503 VHAKDRDRGENA-YISYLI--ANINKVPFEIDHFSGIIKTTSLLDYESMRRE---YV--- 553
Query: 63 IRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+RV+A D P R+ E+ +TV V+D+NDN P F++V
Sbjct: 554 LRVRASDWGLPYRRQTEMQLTV------------------KVQDVNDNRPQFEKV 590
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +N ++Y G+ F+ID TG + TL LD++
Sbjct: 2830 LKVVAHDEDQGANS-EVRYSFSHDLGDMMNIFAIDSHTGWISTLVKLDKE---------- 2878
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ E + Y+T A DNGTP+ S T+ + ++D ND+ +F + Y
Sbjct: 2879 -------------AKMEYKFYVT--ATDNGTPKHSARTTVIVRLKDYNDSPTLFKKRFY 2922
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ TD D N + I E +F+I+ ETG++ T LD + K+ Y
Sbjct: 394 IRLKVTDADEGRNAQV--FLEIVGGNEGGEFNINPETGMLYTAVPLDAE----SKQFYSL 447
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
T V A+D+ + GT + S A +KI VED NDN+P+FD
Sbjct: 448 T---VSAIDQGNA---------------GTRKQSSA-KVKIYVEDTNDNDPIFD 482
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +ATD D N + Y +I + F++D+ TG++ LDR+ +++Y
Sbjct: 870 FRANATDADAGDNA-KVTYSLIT---DTRDFAVDRTTGVLAVSNTLDRE----RQDLY-- 919
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D DN P L ++I+++DINDN P F Y
Sbjct: 920 -ELRIRATDGGGK-----------GPDN--PPLYSEALVRISIDDINDNAPKFSLPAY 963
>gi|41223268|emb|CAD92433.1| protocadherin [Homo sapiens]
Length = 762
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 306 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 245 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 286
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus
floridanus]
Length = 3165
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N I Y + GE+ +F+I+ +TG + T ALDR
Sbjct: 826 VSATDSDVGKNA-QITYSLATDNGEQTINEFTINPQTGAITTTKALDR------------ 872
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 873 -------------ELIPSYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQY 917
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D NG ++Y ++ G+ A F+ID TGIV+T LDR+ R
Sbjct: 932 VRIAATDADTDLNG-RVRY-ALEDDGDGA-FAIDSMTGIVRTAKPLDRESVAR------- 981
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ A+DR G+P LS + + +EDIND+ P F+
Sbjct: 982 YTLKAAAIDR------------------GSPALSSVVPVIVKIEDINDSPPAFE 1017
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D SN I+Y I A E +++ ETG + T LDR+ R +
Sbjct: 610 LRVQAYDADE-SNNALIKYNIGARDFTGASTENFPITVNAETGWIYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
I VIA D+G S + T+ +TV D+NDN+P F+
Sbjct: 669 FI-------------------------VIAMDSGEEPKSASATVILTVTDVNDNDPYFEP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D +N ++Y II + FSID +G V + LD + K
Sbjct: 506 RIRATDADAGANAA-VRYAIIGGNTQNT-FSIDSMSGDVALVKPLDYESIRNYK------ 557
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I + A+D G+P S+ + + V+D+NDN P F
Sbjct: 558 -------------------IVIRAQDGGSPARSNTTQLLVMVKDVNDNAPRF 590
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDIRVQAL-------------DRDDPEREKEI 79
+KE G+ V T+ A D ++ + D R QAL DR D E
Sbjct: 273 EKEKGVYVTTVRARDPENGAVRYSMNSLIDARSQALLALDSVTGRVTTHDRLDRENVDVH 332
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y V+A D+ P + T+++ V D ND+ P F+ +Y
Sbjct: 333 YFRVLAVDDSFPPRTGTTTLQVNVLDANDHTPSFEWSEY 371
>gi|322800564|gb|EFZ21550.1| hypothetical protein SINV_01487 [Solenopsis invicta]
Length = 565
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D +N I+Y +I A F+ID+ +G++ T+ +D
Sbjct: 459 IQVVATDLDEGANSA-IRYSLINA----TWFAIDETSGLITTMTHVDC------------ 501
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P LS + T+++T+ D+NDNEP+F++ Y
Sbjct: 502 -------------EANPAPILIVYATDSGRPPLSSSATVRVTIHDLNDNEPIFEKPLY 546
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ +Y+ I +LDR E Y+ + A D GTP L T+ +TV+D+NDN P+
Sbjct: 165 RDGVLYLDLQI-AGSLDR---EARSRYYLVIEALDGGTPPLRSRLTVNVTVQDVNDNPPV 220
Query: 113 FDRVQY 118
F++ +Y
Sbjct: 221 FNQTRY 226
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D NG I+Y I + +R + F ID ETG+V ALD + E +
Sbjct: 241 LAVNATDADAGDNG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKEHHE---- 295
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 296 ---------------------LVIVARDRGAQPLEASAFLSVRVTDVNDNQP 326
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
R+ IY+ R LDR+ E+ +Y ++V A D GTP L T ++ V D+NDN P
Sbjct: 384 RDNIIYLVVVER--PLDRE----EQSVYELSVEATDAGTPPLCAVRTFRLLVTDVNDNAP 437
Query: 112 MFDRVQY 118
F+R +Y
Sbjct: 438 EFERDRY 444
>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
Length = 4551
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + L ALD + R
Sbjct: 3251 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVLEALDYETCRR------- 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3302 ------------------FYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3341
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N ++Y+I++ F ID +G++ T LD
Sbjct: 2302 LQLVSTDADS-GNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2349
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2350 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2394
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3360 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3401
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3402 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3446
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ +LDR
Sbjct: 1058 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADSLDR------------ 1103
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1104 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1142
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1791 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1836
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1837 -------------EAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1883
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 741 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 788
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 789 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSY 831
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2511 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2552
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2553 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2600
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3186 QPLDR---EQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDY 3236
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 846 IQVEARDKDLGSNG-EVMYSVLT---DTHQFIINSSTGIVYIADQLDRE----SKANY-- 895
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 896 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 931
>gi|424036689|ref|NP_001258739.1| protocadherin 11 X-linked isoform b precursor [Mus musculus]
Length = 1320
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGQNA-EISYMLGFDAPPE---FNLDQRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF 249
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 25/84 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+ID ++G+++ + DR ER++ V AED G
Sbjct: 615 QFTIDPQSGVIRPNISFDR-------------------------ERQESYTFYVKAEDGG 649
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
S + I V D+NDN+P+F
Sbjct: 650 RVSRSSTARVTINVVDVNDNKPIF 673
>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
Length = 4539
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + L ALD + R
Sbjct: 3239 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVLEALDYETCRR------- 3289
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3290 ------------------FYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N ++Y+I++ F ID +G++ T LD
Sbjct: 2290 LQLVSTDADS-GNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2337
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2338 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2382
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3348 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3389
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3390 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3434
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ +LDR
Sbjct: 1046 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADSLDR------------ 1091
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1092 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1130
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1779 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1824
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1825 -------------EAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1871
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 729 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 776
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 777 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSY 819
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2499 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2540
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2541 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2588
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3174 QPLDR---EQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDY 3224
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 834 IQVEARDKDLGSNG-EVMYSVLT---DTHQFIINSSTGIVYIADQLDRE----SKANY-- 883
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 884 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 919
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D N I Y + GE A +F+I+ +TG + T LDR
Sbjct: 826 VSATDSDVGKNA-QITYSLGTDGGESASEFTINPQTGAITTTRTLDR------------- 871
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 872 ------------ELVPGYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFEAPQY 916
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
+++ A D D +N I+Y I A E +++ ETG + T LDR+ R +
Sbjct: 610 LRIQAYDADEGANA-QIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
TVIA D+G S + T+ +TV D+NDN+P FD
Sbjct: 669 -------------------------FTVIAADSGEVPKSASATVILTVTDVNDNDPYFDP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y + G+ A F+ID TG+++T LDR
Sbjct: 931 LRVSATDADTDLNG-RVRY-ALDDDGDGA-FAIDSSTGVIRTAKPLDR------------ 975
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + +A D G+P LS + I ++D+ND+ P F+
Sbjct: 976 -------------ESVAMYTLKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFE 1016
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID G V + LD
Sbjct: 506 RIRATDADS-GNNAAVRYAIIGGNTQNT-FSIDSMIGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRF 590
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + P A+ F ID +TG++ T +D
Sbjct: 512 LQVQARDRDE-GNNAALSYALADTPDTHAQWFQIDTQTGLITTRSHID------------ 558
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 559 -------------CETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFY 604
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A + A S +G V T A IY+
Sbjct: 1055 IQVNASDLDT-GNNARITYRIVDAGADNASQSSASVSG-VDTDLAQHFGIFPNSGWIYLR 1112
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR+ +R + +TV+A DNGTP + + V D NDN+P F R Y
Sbjct: 1113 A-----ALDRESRDRYE---LTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLRESY 1162
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 211 RLSSHRERDGVLYLDLQISGFLDR---ETTPAYSLLIEALDGGTPPLRGLMTVNITIQDV 267
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 268 NDNQPIFNQSRY 279
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +N ++Y I+ + A +GIV+T LDR+ +++Y
Sbjct: 2358 QVQAFDADENANS-RMRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI----RDVY--- 2409
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2410 ------------------SLKIIATDEGVPQMTGTSTIRVHIVDVNDNQPTF 2443
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D G P LS T+ + V+D+NDN P+F+R +Y
Sbjct: 994 DYETAQRHSLIVTATDAGLPPLSADLTILVDVQDVNDNPPVFERDEY 1040
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 34 DKETGIVKTLYALDRDDPEREKEIY----------ITTDIRVQALDRDDPEREKEIYITV 83
+ ET I+ T+ A D D+ + +Y + D R L +RE+ T+
Sbjct: 1866 NSETAIIHTVVASDLDEGPNAEIVYSIIGGNLGNKFSIDARTGELSARSLDREQHSRYTL 1925
Query: 84 I--AEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
A D G P C + + VED NDNEP F+ +Y
Sbjct: 1926 QLQASDRGQPITHQGHCNISVFVEDQNDNEPRFELAKY 1963
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A D D N +I Y ++K FSID TGI++T LD + E+ IY
Sbjct: 1281 VRIRAIDRDHGQNA-SINYSLLKGRDSDGHGLFSIDANTGIIRTRVMLDHE----ERSIY 1335
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A D G P +++ V D+NDN P F
Sbjct: 1336 ---------------------RLAVAATDGGNPPKQTLRMLRVEVLDLNDNRPTF 1369
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG V LD + E +
Sbjct: 294 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKELHE---- 348
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D+G L + I V D+NDN+P + +
Sbjct: 349 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVI 384
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 31/110 (28%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N I+Y ++ A + F + TG + T LDR+
Sbjct: 1179 VSATDADLGENAA-IRYSLLPA---NSSFQVHPVTGEISTREPLDRE------------- 1221
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+E+Y + V A D GTP S +++TV D+NDN P
Sbjct: 1222 -------------LRELYDLVVEARDQGTPTRSARAPVRVTVTDVNDNAP 1258
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E ++VIA D GTP L + ++ + V D+NDN P F+
Sbjct: 451 DREATSNYTLSVIATDKGTPPLHASKSIFLRVTDVNDNAPEFE 493
>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
Length = 4555
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + L ALD + R
Sbjct: 3255 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVLEALDYETCRR------- 3305
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3306 ------------------FYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3345
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N ++Y+I++ F ID +G++ T LD
Sbjct: 2306 LQLVSTDADS-GNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2353
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2354 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2398
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3364 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3405
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3406 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3450
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ +LDR
Sbjct: 1062 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADSLDR------------ 1107
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1108 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1146
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1795 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1841 -------------EAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1887
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 745 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 792
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 793 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSY 835
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2515 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2557 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2604
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3190 QPLDR---EQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDY 3240
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 850 IQVEARDKDLGSNG-EVMYSVLT---DTHQFIINSSTGIVYIADQLDRE----SKANY-- 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 900 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 935
>gi|149055476|gb|EDM07060.1| protocadherin 11 X-linked (predicted) [Rattus norvegicus]
Length = 1018
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGFDAPPE---FNLDRRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNVFGLDVVETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 235 LQVSVADTNDNRPIF 249
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|328710949|ref|XP_001947627.2| PREDICTED: protocadherin-like wing polarity protein stan-like
isoform 3 [Acyrthosiphon pisum]
Length = 3166
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N I Y + G+ ++F+I+ ++G + T ALDR
Sbjct: 848 VSATDGDVGQNA-LITYSLASGYGDASEFTINAQSGAIVTTKALDR-------------- 892
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A D G P LSD ++I++ DINDN P F Y
Sbjct: 893 -----------EVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASY 937
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP-----GERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D N ++YRI E ++D+++G V T + LDR
Sbjct: 632 VRVQAYDADEGENAA-LKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDR------- 683
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + V+AED G P S ++ +T++D+NDNEP+F
Sbjct: 684 ------------------ETNPKYQFQVVAEDGGDPPKSATASVVVTIQDVNDNEPIFHP 725
Query: 116 VQY 118
QY
Sbjct: 726 KQY 728
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG I+Y + G A F ID +GI++T +LDR
Sbjct: 952 LQVSASDADSGLNG-RIKYAL--DDGVEA-FVIDPTSGILRTAASLDR------------ 995
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + I V A D G+P LS A + I +ED+ND+ P+F+
Sbjct: 996 -------------ESIPQYNIHVFAIDKGSPSLSTAVPVTIRIEDVNDSPPVFE 1036
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA + P +N Q I A F+ID +G+V TL +LDR+ D
Sbjct: 303 VHARSMPPNNNPIEYQMSPIIDTRSHAMFTIDSNSGLVTTLVSLDRE----------FMD 352
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ Y+ VIA D + + T+++ V D ND+ P+F+
Sbjct: 353 VH---------------YLRVIAIDTSSHPSTATTTLQVNVVDANDHSPVFE 389
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N ++Y II + +FSID + G V + +LD
Sbjct: 529 IKATDADQGLNA-VVRYAIIGG-NTQGQFSIDSQNGEVSLVKSLDY-------------- 572
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + + A+D G P S+ + + V+D+NDN P F
Sbjct: 573 -----------EAMRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRF 612
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ++EK ++V A D+G LSD T+ + V D N+ P+FD Y
Sbjct: 787 DYKQEKRFILSVTATDSGG--LSDTATIYVNVTDANNFAPIFDNAPY 831
>gi|308500712|ref|XP_003112541.1| CRE-FMI-1 protein [Caenorhabditis remanei]
gi|308267109|gb|EFP11062.1| CRE-FMI-1 protein [Caenorhabditis remanei]
Length = 2600
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 32/118 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V+A D D NG II+ E ++ F ID+++G++KT LDR+ R
Sbjct: 503 RVYAIDEDSGPNG------IIRYSMEGSEDFIIDEDSGVIKTTKLLDRETTSRYS----- 551
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L+ TM + ++DINDN P+FD+ +Y
Sbjct: 552 --------------------LKVTARDMGTPPLNTTTTMTVVLKDINDNAPIFDKKEY 589
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG ++Y + + G+ +I+ ++G+++T LDR
Sbjct: 293 LSVFARDLDSGENG-EVEYSLGEGNGKNL-LAINSKSGVIQTAAPLDR------------ 338
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + VIA D GTP+ ++ITV D+NDN P+F Y
Sbjct: 339 -------------ESLSLIRLDVIASDKGTPKRDSKALVEITVVDVNDNAPVFASDSY 383
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D NG + Y + ++ A F +D+ +G ++ LDR
Sbjct: 807 LQVSAIDADIGPNG-IVDYFLNESSSSPAIQLFRLDRTSGTLRVSSKLDR---------- 855
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I + + A D GTP LS + + +T+ D+NDN P F+++ Y
Sbjct: 856 ---------------EQFAVIVLPIYARDRGTPSLSASSEITLTLSDVNDNAPSFEQLSY 900
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 62 DIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DI V + LDR+D + V A D+ +P L+ + +++ ++DINDN P F Y
Sbjct: 738 DISVASDLDRED---RATFSVIVTASDHASPPLNTSTQIEVILDDINDNAPQFTSSSY 792
>gi|403420604|ref|NP_001258157.1| protocadherin 11 X-linked precursor [Rattus norvegicus]
Length = 1338
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGFDAPPE---FNLDRRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEY 575
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNVFGLDVVETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 235 LQVSVADTNDNRPIF 249
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
Length = 3291
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D TG++ TL ALDR
Sbjct: 1662 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNTGVLTTLRALDR------------ 1704
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EIY+TV A D G P L T+++TVED ND+ P F
Sbjct: 1705 -------------EEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTF 1744
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG I Y + APG FSID +GI+ T LD
Sbjct: 487 VRVTARDPDQGTNG-QITYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 532
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 533 --------------ELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 577
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1120 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1165
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1166 ------------EQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTF 1205
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2554 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2600
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2184 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2235
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2236 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2268
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 424 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 471
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1597 VRPLDR---EQRAEHVLTVVALDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEY 1647
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D NG +QYRI+ A F++D +G T+ LDR
Sbjct: 1765 LRASDPDGGLNG-QLQYRILDGDSSGA-FALDLTSGEFGTMRPLDR-------------- 1808
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P+F Y
Sbjct: 1809 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFPVPSY 1853
>gi|281350970|gb|EFB26554.1| hypothetical protein PANDA_001737 [Ailuropoda melanoleuca]
Length = 625
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T +LDR E ++ + + V+A+D G
Sbjct: 547 FTIDPESGMISTFRSLDR-------------------------EVQEAVELRVVAQDLGE 581
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L+ C + ITV+D+NDNEP+F R Y
Sbjct: 582 PPLTATCLVSITVDDVNDNEPIFRRQVY 609
>gi|14589944|ref|NP_116754.1| protocadherin-11 Y-linked isoform b [Homo sapiens]
gi|13161057|gb|AAK13468.1|AF332216_1 protocadherin 11 [Homo sapiens]
Length = 1048
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 518 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 562
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 563 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 607
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 239 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 281
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 457 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 498
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 648 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 682
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 683 VSRSSSAKVTINVVDVNDNKPVF 705
>gi|14589942|ref|NP_116753.1| protocadherin-11 Y-linked isoform a [Homo sapiens]
gi|10803411|emb|CAC13122.1| protocadherin [Homo sapiens]
Length = 1037
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 507 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 551
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 552 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 596
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 228 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 270
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 446 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 487
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 633 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 667
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 668 DGGRVSRSSSAKVTINVVDVNDNKPVF 694
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 467 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEAALDRESMERH---- 521
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 522 ---------------------YLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQY 560
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 1103 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1156
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1157 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1189
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 687 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 732
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 733 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 773
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 575 LQLRATDGDAPPNA-NLRYRFVGPPAARAAASAAFEIDPRSGLISTSGRVDREHMESYEL 633
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 634 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 680
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+GTP LS + ++ +TV D+NDN P F +Y
Sbjct: 837 DRESVEHYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEY 883
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 1042 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 1088
>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
Length = 3278
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D TG++ TL ALDR
Sbjct: 1649 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNTGVLTTLRALDR------------ 1691
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EIY+TV A D G P L T+++TVED ND+ P F
Sbjct: 1692 -------------EEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTF 1731
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG I Y + APG FSID +GI+ T LD
Sbjct: 474 VRVTARDPDQGTNG-QITYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 519
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 520 --------------ELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 564
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1107 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1152
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1153 ------------EQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTF 1192
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2541 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2587
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2171 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2222
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2223 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2255
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 411 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 458
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1584 VRPLDR---EQRAEHVLTVVALDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEY 1634
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D NG +QYRI+ A F++D +G T+ LDR
Sbjct: 1752 LRASDPDGGLNG-QLQYRILDGDSSGA-FALDLTSGEFGTMRPLDR-------------- 1795
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P+F Y
Sbjct: 1796 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPVFPVPSY 1840
>gi|332836068|ref|XP_003313012.1| PREDICTED: protocadherin-16 [Pan troglodytes]
Length = 3305
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 505 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 550
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 551 --------------ELEPQPQLTVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFY 595
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1681 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1723
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1724 -------------EEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDENDHAPTF 1763
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 23 KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD---IRVQALDRDDPEREKEI 79
+ G +ID+ +G+V+T LDR+ +R + +T D + V D ++
Sbjct: 174 EGSGVGTDLAIDEHSGVVRTARVLDREQRDRYRFTAVTPDGDTVEVTVRVADINDKAPAF 233
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D G+P + +T+ DIND+ P F++ +Y
Sbjct: 234 PQAQAAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRY 272
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1138 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1183
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1184 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1223
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1616 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1666
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2203 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2254
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2255 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2287
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + + D+NDN P FDR Y
Sbjct: 441 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPAFDRQLY 489
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 524 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 570
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 571 -------------CETEPVPQLTVIARDGGVPPLSSTATILVTIHDVNDNEPIFDQSFY 616
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
HA D D S+G + Y ++ G+R F+ID +G + LD + +R I
Sbjct: 953 AHAHDKDSGSSG-QVSYSLVSDSGKRL-FAIDARSGHLSLTQHLDYESSQRHSLI----- 1005
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 1006 --------------------VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEY 1041
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2343 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2390
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2391 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2428
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1056 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1101
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +TV+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1102 SGWIYLRAPLDRETRDRYQ---LTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1158
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
ER+ +Y+ D+++ LDR E + + A D GTP L T+ IT++D+NDN+
Sbjct: 229 ERDGVLYL--DLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQ 283
Query: 111 PMFDRVQY 118
P+F++ +Y
Sbjct: 284 PIFNQSRY 291
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1972 LQINAVDADLGVNARLV-YSL--ANETQWQFAIDSQSGLITTVGKLDR------------ 2016
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 2017 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYPY 2062
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1277 VRVRAVDRDNGQNA-SITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHE--------- 1326
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G+P +++ V D+NDN P F
Sbjct: 1327 -----------------ERSIYRLGVAASDGGSPPRETIRMLRVEVLDLNDNRPTF 1365
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1849 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1908
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1909 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPSFKLSKY 1957
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 306 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 347
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 348 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 394
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 449 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 503
Query: 113 FDRVQY 118
F++ Y
Sbjct: 504 FEQDLY 509
>gi|397496709|ref|XP_003819172.1| PREDICTED: protocadherin-16 [Pan paniscus]
Length = 3300
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 613 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 658
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 659 --------------ELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 703
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1671 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1713
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1714 -------------EEQEEIILTVYAQDRGSPPRLTHVTIRVAVEDENDHAPTF 1753
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1246 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1291
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1292 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1331
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1606 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1656
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2193 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2244
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2245 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2277
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 549 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 597
>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
Length = 3300
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG A FSID +GI+ T +LD
Sbjct: 491 VRVTAQDPDQGTNG-QVTYSL--APGAHAHWFSIDPSSGIITTAASLDY----------- 536
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 537 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 581
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y + GE FS+D +TG++ TL ALDR++ E+
Sbjct: 1667 LTLRATDPDLGANG-HVTYGGVS--GE--SFSLDPDTGVLTTLRALDREEQEK------- 1714
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I +TV A D G+P L T+++ V+D ND+ P F
Sbjct: 1715 ------------------INLTVYARDGGSPPLLAHVTVRVAVDDENDHAPAF 1749
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1124 RVFATDRDSGPNG-RLTYSLRQLSEDSKVFRIHPQTGEVTTLQTLDR------------- 1169
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ ITV D+NDN P F
Sbjct: 1170 ------------ERQSSYQLLVQVQDGGSPPRSTTGTVHITVLDLNDNSPTF 1209
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + I+V D+ND P F + +Y
Sbjct: 1602 VRPLDR---EQRAEYLLTVVASDHGSPPRSATQLLTISVADVNDEAPTFQQQEY 1652
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2559 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2605
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 427 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPTFDRQLY 475
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1770 LRASDPDAGANG-QLQYRILDGDPAGA-FVLDLASGEFGTMRPLDR-------------- 1813
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1814 -----------EVEPAFQLKIEARDGGQPALSATLLVTVTVLDANDHAPTFPEPAY 1858
>gi|440901369|gb|ELR52327.1| hypothetical protein M91_16181 [Bos grunniens mutus]
Length = 681
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 38/129 (29%)
Query: 3 VHATDVDPP-SNGGTIQYRII-----------KAPGE-RAKFSIDKETGIVKTLYALDRD 49
V A+D D P ++ ++Y ++ + P E FSID E+G++ T +LDR
Sbjct: 478 VSASDADEPGTDHARLRYALLPLPALCNPETPRPPAECGPSFSIDPESGVISTTRSLDR- 536
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ I + V+A D G P LS C + I V+D+NDN
Sbjct: 537 ------------------------EAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDN 572
Query: 110 EPMFDRVQY 118
EP+F + Y
Sbjct: 573 EPVFLKQVY 581
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +++Y + ++A D G+P LS T+ + V D+ND P+F + Y
Sbjct: 414 LDRE----SRDLYDLRLVATDAGSPPLSTEETLLLRVADLNDQPPLFSQEHY 461
>gi|18027280|gb|AAL55729.1|AF277053_1 protocadherin-PC [Homo sapiens]
Length = 1037
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 507 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 551
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 552 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 596
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 228 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 270
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E KE I ++A D G P L+ + + I V+D NDN P+F
Sbjct: 446 DYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVF 487
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 633 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 667
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 668 DGGRVSRSSSAKVTINVVDVNDNKPVF 694
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATDVD NG I Y I + + F ++ +TG++ T LDR+ K +Y
Sbjct: 550 LQVSATDVDSGDNG-RITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRE----TKSLY- 603
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TV+A+D+G PQL + +++T+ DINDN P+F V+Y
Sbjct: 604 --------------------SFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEY 642
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++ATD D NG T+ Y I + F +D ++G+V T LDR
Sbjct: 445 LQLNATDPDEGDNG-TVSYSITGG-NDLGWFQVDFQSGLVTTAKPLDR------------ 490
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + IT+ A+D+G+ + + T+ +T+ D NDN+P F + Y
Sbjct: 491 -------------EQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSY 535
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG I+Y I A + F +D TG+++T LD
Sbjct: 226 LRVSAADRDSGSNG-DIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDF----------- 273
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E + VIA D G P +D T+ I V D NDN P
Sbjct: 274 --------------EVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSP 311
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +N I Y II FSID TG++ TL +LD
Sbjct: 656 LQVTATDADEGTNA-VISYDIIGG-NNNGNFSIDSSTGVISTLASLDH------------ 701
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E+ + + A+D G + + +TV + DN P+F
Sbjct: 702 -------------EVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVF 741
>gi|390470196|ref|XP_002807360.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Callithrix
jacchus]
Length = 3297
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 592 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAISLDY----------- 637
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 638 --------------ELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 682
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++KTL ALDR
Sbjct: 1668 LTLRATDPDLGANG-----QVTYGGVSSESFSLDPDTGVLKTLRALDR------------ 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1711 -------------EEQEEINLTVYAQDRGSPPQLTHVTIRVAVEDENDHTPTF 1750
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D P ++YR+++ +D TG + LDR + +
Sbjct: 1549 ATDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDRXXXXXXRFPW------ 1602
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1603 CGPLDR---EQRAEHVLTVMASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1653
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + F +D TGI+ T+ LDR EI+
Sbjct: 2190 LQVEADDLDQGS-GGQISYSLAASQPAHGLFHVDPATGIITTIAILDR-------EIW-- 2239
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E + +IA D G+P L + T+ + V D NDN P
Sbjct: 2240 ----------------AETRLVLIATDRGSPALVGSATLTVMVIDTNDNRP 2274
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG + TL LDR
Sbjct: 1225 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGELTTLQTLDR------------- 1270
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1271 ------------EQQSSYQLLVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTF 1310
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 528 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 576
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1771 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLTSGEFGTMRPLDR-------------- 1814
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1815 -----------EVEPAFQLKIEARDGGQPALSATLLLTVTVLDANDHAPAFSVPAY 1859
>gi|334331086|ref|XP_003341441.1| PREDICTED: protocadherin-23-like [Monodelphis domestica]
Length = 3395
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
PSNG + + A F++D E+G++ T+ LDR
Sbjct: 610 PSNGCIPEEAVSGARCPPLAFAVDPESGVISTIGTLDR---------------------- 647
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + + + A D G P LS C + +T+ED+NDNEP+F R Y
Sbjct: 648 ---EVQEAVELQIEARDLGHPPLSSTCWLSLTIEDVNDNEPVFQRQVY 692
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG I+Y I+ + A F ID +G++ T LD
Sbjct: 2285 IQVFAADLDSDLNG-QIEYSILSGNQDEA-FQIDAVSGVIATNTILDY------------ 2330
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A D G LS +KI V D+NDN P+F
Sbjct: 2331 -------------ELTSSYSLVVQAADKGISSLSSTAVVKIQVVDLNDNIPVF 2370
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G I Y I+ E F +D+ +G++ T+ LD Y T
Sbjct: 1661 VHHIVAKDPDEGRNGRITYHILSG-NENNTFMLDEISGLLTTISPLD----------YET 1709
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V +T+++ D+G P LS T+ I V DIND P+F + Y
Sbjct: 1710 QTFHV---------------LTLLSLDDGLPALSTTQTLTIYVLDINDEAPVFKQHLY 1752
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D+D N G +QY II E+ F+I++ +G + T +LDR
Sbjct: 1873 VLAVDMDT-GNNGAVQYHIIGGNTEQ-HFTINETSGELSTTCSLDR-------------- 1916
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + D G P S +K+TV D ND++P F Y
Sbjct: 1917 -----------EHISNYTLIIECYDLGNPSRSSMGEIKVTVLDENDHDPTFPTAPY 1961
>gi|432879831|ref|XP_004073569.1| PREDICTED: cadherin-related family member 2-like [Oryzias latipes]
Length = 1281
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D P + IK F+I+ +TGI+ LDR
Sbjct: 590 VKIEATDADEPDTVNSQIKFSIKPSTYSPSFTINPDTGILINSKGLDR------------ 637
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALD PE I +TV+A D G P+L + + I+VED+NDN P F Y
Sbjct: 638 -----EALD---PELNGRIQLTVVATDQGDPKLFSSVPVTISVEDVNDNVPAFKSPSY 687
>gi|348570608|ref|XP_003471089.1| PREDICTED: protocadherin-11 X-linked-like [Cavia porcellus]
Length = 1102
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F++D TG++ + LDR
Sbjct: 487 KISATDADNGQNAEISYLLGVDAPSE---FNLDPRTGVLTAVNKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYYFTVLAKDNGIPSLMTNATVFVTVLDQNDNSPVFTHNEY 575
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVSDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DNEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPSLNQSSLLLVKVKDE 459
Query: 107 NDNEPMFDRV 116
NDN P+F ++
Sbjct: 460 NDNAPVFTQL 469
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 524 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 570
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 571 -------------CETEPVPQLTVIARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 616
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
HA D D S+G + Y ++ G+R F+ID +G +
Sbjct: 953 AHAHDKDSGSSG-QVSYSLVGDSGKRL-FAIDARSGHL---------------------- 988
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 989 ILSQHLDYESSQRHSLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEY 1041
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2343 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2390
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2391 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2428
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 223 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 279
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 280 NDNQPIFNQSRY 291
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1056 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1101
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + + V+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1102 SGWIYLRAPLDRETRDRYQ---LMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1158
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1277 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHE--------- 1326
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G+P +++ V D+NDN P F
Sbjct: 1327 -----------------ERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTF 1365
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1972 LQINAVDADLGVNARLV-YSL--ANETQWQFAIDSQSGLITTVGKLDR------------ 2016
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 2017 -------------ELQASYNFMVLAMDGGRYEVRSATVPVQINVLDINDNRPVFERYPY 2062
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1849 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1908
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1909 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1957
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 306 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 347
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 348 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 394
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 449 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 503
Query: 113 FDRVQY 118
F++ Y
Sbjct: 504 FEQDLY 509
>gi|48976105|ref|NP_001001754.1| cHz-cadherin precursor [Gallus gallus]
gi|34761804|gb|AAQ82055.1| cHz-cadherin [Gallus gallus]
Length = 2819
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++ G FSID +TG++ T + DR
Sbjct: 745 LQVEAYDADLGVNG-EVKYGLMHRDGASLGFSIDSDTGVITTTRSFDR------------ 791
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +KE ++V A D L C + + + D+NDN+P F+ +Y
Sbjct: 792 -------------EEQKEHTLSVTATDQAPEPLIGICQITVLIADVNDNDPKFENSRY 836
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD+D +G ++Y I+K E +F +I+ ETGI+ T + DR+ ++ Y+
Sbjct: 1063 VQVLATDLDSGLHG-QVRYFILKDASEDYQFFTIEPETGIISTHASFDRE----KRASYL 1117
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R +G P +D ++I V D+NDN P F + Y
Sbjct: 1118 ---IEVQSQDSSESARPGV---------HGHPN-TDTAYVRIFVSDVNDNAPAFPQPVY 1163
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 32 SIDKETGIVK--TLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
++D ++G+ + + L++ DP + + +D V D E + + VIA D G
Sbjct: 1614 AVDLDSGLNGRFSFHLLNKSDPG--GQFSVASDGWVIVAGVLDHETVTQYQLIVIATDMG 1671
Query: 90 TPQLSDACTMKITVEDINDNEPMFD 114
P L+ + T+ +T++D+NDN P F+
Sbjct: 1672 QPPLACSATVLVTLQDVNDNGPEFE 1696
>gi|402871012|ref|XP_003899484.1| PREDICTED: protocadherin Fat 1-like [Papio anubis]
Length = 1188
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + KFSID TG+VK + LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDKFSIDSATGVVKITHPLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSMVVLKVSLEDVNDNPPKF 927
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLVY--AISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESY 827
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQY 438
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1034
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1035 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1067
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 651
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+GTP LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>gi|291231659|ref|XP_002735777.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 3815
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N I Y I+ G A FSID +G ++T
Sbjct: 2867 FTVQATDADIDENS-EISYAIVGGDG-WAAFSIDPPSGKIRT------------------ 2906
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ LDR ER++ Y+ + A D GTP LS + + V D+NDN+PMF
Sbjct: 2907 ---AISTLDR---ERKERYYLMITATDGGTPALSTLKGLIVWVNDLNDNDPMF 2953
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 44 YALDRDDPEREKEIYI---TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
YA+D DD I T +I + + D E + I VIA DNG P L+ +
Sbjct: 3305 YAIDTDDTLGLDHFQIDASTGEITIN--EPTDREANEIIEFHVIASDNGVPVLTSTTLVV 3362
Query: 101 ITVEDINDNEPMFDRVQY 118
+T D+NDN+P+FD Y
Sbjct: 3363 VTNLDLNDNKPIFDPSYY 3380
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 44 YALDRDDPEREKEIYITTD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
Y + DP+ + +I ++ I V+A LDR E + V +D G+P LSD T+++
Sbjct: 1088 YTVTNGDPDGQFQIDPSSGAISVKAPLDR---ETHSSYDLLVKVQDGGSPALSDTTTVQV 1144
Query: 102 TVEDINDNEP 111
T+ DIND P
Sbjct: 1145 TISDINDKYP 1154
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID E+G+V+ +LDR+ E VQ D +TV
Sbjct: 1788 FSIDIESGLVEVKSSLDREATPSALEFI------VQCKDT----------LTV------P 1825
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
Q S TM ITV D NDN P++D V Y
Sbjct: 1826 QQRSSTTTMTITVSDENDNTPVYDPVTY 1853
>gi|402910719|ref|XP_003918004.1| PREDICTED: protocadherin-11 X-linked-like [Papio anubis]
Length = 1054
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D G + + P +FS+D+ TG++ + LDR
Sbjct: 516 KVSATDAD---TGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E++ + TV+A+DNG P L+ T+ ++V D NDN P F +Y
Sbjct: 560 ------------EKEEKYFFTVLAKDNGVPPLTSNVTVFVSVIDQNDNTPTFTHNEY 604
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 211 QNIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 263
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 264 LQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 641 ENDGFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 675
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 676 DGGRVSRSSSAKVTINVVDVNDNKPVF 702
>gi|426247588|ref|XP_004017563.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Ovis aries]
Length = 3324
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID E+G++ T +LDR E ++ + + V+A D G
Sbjct: 593 FSIDPESGVISTTRSLDR-------------------------EAQEAVELRVVAHDLGE 627
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITVED+NDNEP+F + Y
Sbjct: 628 PPLSATCLVSITVEDVNDNEPVFLKQVY 655
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SNG ++Y I+ + F +D +G++ LD
Sbjct: 2214 VQVFATDQDSGSNG-LVEYSILSG-NQGNVFQMDPLSGVLTANVILDY------------ 2259
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A D G P+LSD +KI V DINDN P F
Sbjct: 2260 -------------EYTSAYSLIVQATDKGIPRLSDTTVIKIQVIDINDNAPTF 2299
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D SNG + Y II + F+I++ +G + T ALDR
Sbjct: 1804 ASDMDAGSNGA-VTYHIISGNTDEY-FAINEMSGELSTTRALDR---------------- 1845
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++ D G+P S +++ V D+ND+ P F R QY
Sbjct: 1846 ---------EEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDVNDHSPSFPRQQY 1890
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 4 HATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP + G + + I+ E F +D+ +G + T LD +
Sbjct: 1592 HITAQDPDAGRNGRVTFSILSG-NENMAFMLDESSGFLTTASPLD-------------YE 1637
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ Q + +T++A D GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1638 IKSQHI------------LTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLY 1681
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ++A D+G P LS + T+ I V D++DN P F ++Y
Sbjct: 2576 DREATASHELVLLAFDHGCPPLSSSATVSIEVLDVDDNPPAFSSLEY 2622
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG + Y + APG + FSID +GI+ T +LD
Sbjct: 490 VRVMARDPDQGSNG-RVTYSL--APGAHTRWFSIDPTSGIITTAASLDY----------- 535
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 536 --------------ELEPQPQLIVVATDGGLPALASSATVSVALQDVNDNEPQFQRTFY 580
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1642 LTLRATDPDLGANG-QVTYGGIS--GE--SFSLDPDTGVLTTLRALDR------------ 1684
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1685 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTF 1724
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + F I +TG + TL LDR
Sbjct: 1123 RVFATDRDSGPNG-RLTYSLRPLSEDSNAFRIHPQTGEMTTLQTLDR------------- 1168
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1169 ------------ERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSF 1208
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2534 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFSRASY 2580
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1577 VRSLDR---EQRAEHILTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1627
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L T + V D+NDN P FDR Y
Sbjct: 425 RQLDRE----ERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTFDRQLY 474
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2164 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2214
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2215 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2248
>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 3386
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 581 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 626
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 627 --------------ELEPQPQLTVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFY 671
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1757 LTLRATDPDLGANG-----QVTYGGVSSGSFSLDPDTGVLTTLRALDR------------ 1799
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1800 -------------EEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTF 1839
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1214 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1259
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1260 ------------EQQSTYQLLVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTF 1299
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQ LDR E+ E + V+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1692 VQPLDR---EQRAEHVLIVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1742
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2279 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2330
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2331 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2363
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 517 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQFY 565
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1860 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1903
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1904 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1943
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG + Y + APG + FSID +GI+ T +LD
Sbjct: 490 VRVMARDPDQGSNG-QVTYSL--APGAHTRWFSIDPTSGIITTAASLDY----------- 535
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 536 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 580
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1666 LTLRATDPDLGANG-QVTYGGIS--GE--SFSLDPDTGVLTTLRALDR------------ 1708
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1709 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTF 1748
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + F I +TG + TL LDR
Sbjct: 1123 RVFATDRDSGPNG-RLTYSLRPLSEDSKAFRIHPQTGEMTTLQTLDR------------- 1168
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1169 ------------ERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSF 1208
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
L+ D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2554 LESLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2604
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1601 VRSLDR---EQRAEHLLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1651
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L T + V D+NDN P FDR Y
Sbjct: 425 RQLDRE----ERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTFDRQLY 474
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1769 LRASDPDVGANG-QLQYRILDGDSSGA-FVLDLTSGEFGTMRPLDR-------------- 1812
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1813 -----------EVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAF 1852
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2188 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2238
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2239 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2272
>gi|402870676|ref|XP_003899332.1| PREDICTED: protocadherin-16-like [Papio anubis]
Length = 704
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T+ LDR E ++ + + V+A D G
Sbjct: 601 FAIDPESGVISTIRTLDR-------------------------EVQEAVELRVVARDLGE 635
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 636 PPLSATCLVSITVDDVNDNEPIFWRQVY 663
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N I+Y ++ + F+ID+ +G++ T + ++
Sbjct: 460 LKVTATDLDEGANSA-IKYSLLNS----TWFTIDETSGLIST-------------QTHV- 500
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + VIA D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 501 -----------DCEADPAPILVVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLY 547
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N + YR+ + F I TG IY+
Sbjct: 1056 LQVTAVDLDT-GNNARLSYRLQGS----TAFRISPNTGW-----------------IYL- 1092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ +R +TV+A DNG+P + + ++ +TV D NDN+P F++ Y
Sbjct: 1093 ----AQVLDRESSDRHA---LTVLATDNGSPAATASTSVLVTVLDDNDNDPRFEKEFY 1143
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYI 59
+++ A+D D NG I Y I+ + A F+I +GIV+T LDR+ E+ +
Sbjct: 2287 VKLSASDADQGMNG-RILYHIVDGNPDNA-FTISPPYSGIVRTNIVLDREIREKYR---- 2340
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+IA D G PQL+ + + V DINDN+P F
Sbjct: 2341 ---------------------LTIIATDQGNPQLTGTAALSVRVIDINDNQPTF 2373
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIY-----------ITTDIRVQALDRD 71
PG ++ ++ T ++ T+ A D D+ + EIY D AL
Sbjct: 1768 PGSCYTLAVPENQGTAVIHTIAAADLDE-GKNGEIYYSIVGGNIGAKFALDPTSGALSMS 1826
Query: 72 DPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +RE + +T+ A+D G P L C + + V D+NDN P F + QY
Sbjct: 1827 NLDRESVSKYALTISAKDKGRPSLEARCNLTVIVLDVNDNAPTFVQNQY 1875
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D NG I+Y I + +R + F ID ETG+V ALD + ER +
Sbjct: 242 LAVNATDSDAGENG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHE---- 296
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 297 ---------------------LVIVARDRGAQPLEASAFLSVRVTDVNDNQP 327
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P F R +Y
Sbjct: 398 LDRE----EKPVYDLSVEATDAGTPPLRAVRTFRLIVTDVNDNAPKFARDRY 445
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + A D G P L + +TV+D+NDN P+F++ +Y
Sbjct: 179 SLDR---EARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRY 227
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + Y +I + E A+FS+ E+GIV E+ + +
Sbjct: 1585 VRVVAVDKDAGDNG-RVSY-VITSANEEARFSVGYESGIVSL-----------ERPMARS 1631
Query: 61 TDIRVQALDRDDPEREKEIYITV---IAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
T++ + A D P R+ + +T+ + NG P+L A + ED+ P+ +
Sbjct: 1632 TELEITANDHGSPPRKSTLRLTLSLASGQTNGPPRLLLANPVARISEDLQVGAPVLN 1688
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V ATD D NG I Y I A F +D TG+V T LDR
Sbjct: 1930 MTVRATDPDQGVNG-KITYAI--AEETSWLFRVDNLTGVVTTAGPLDR------------ 1974
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPMFDRVQY 118
ER+ V+A D+G S ++I V D+NDN P+F+ +
Sbjct: 1975 -------------ERQSSYKFLVVATDSGKYDARSSTIPVEIRVSDVNDNAPVFEEYPF 2020
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 32/116 (27%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPER-EKEIYITTDIRVQALD---------------- 69
E F+ID++TG ++ +DP R + E + TD RV+ D
Sbjct: 2165 ESGTFAIDEDTGSIRV------NDPSRLDAESW--TDTRVRPADEGAEDDGRTNSWARSL 2216
Query: 70 -------RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ P + +TV A G L + + V D+NDN P+F + QY
Sbjct: 2217 EGVGQRPKEKPRESSKHVLTVAARTAGPDPLEAYVKLVVKVSDVNDNPPIFTQTQY 2272
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 31/111 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D N ++Y +++A + F++D +TG + T LDR+
Sbjct: 1159 SVSASDPDLGKNA-LLRYAVVQA---NSSFTVDPDTGEIITKEPLDRE------------ 1202
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEP 111
K ++ V+ A D GTP + +KITV D+NDN P
Sbjct: 1203 --------------TKGVHELVLEARDQGTPSRAARVPLKITVLDVNDNSP 1239
>gi|410334089|gb|JAA35991.1| dachsous 1 [Pan troglodytes]
Length = 3298
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 493 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 538
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 539 --------------ELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 583
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1669 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1712 -------------EEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDENDHAPTF 1751
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1126 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1171
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1172 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1211
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1604 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1654
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2191 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2242
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2243 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2275
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + + D+NDN P FDR Y
Sbjct: 429 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPAFDRQLY 477
>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
Length = 4589
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 24 APGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81
+PG A F+ K+ G + L R ER K + + +D D E K+ Y+
Sbjct: 3250 SPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISVIDSLDYEMCKDFYL 3309
Query: 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A+D GTP LS T+ I + D+NDN P F++ Y
Sbjct: 3310 VVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVY 3346
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD P NG Q R G+R +F++D G++K LDR
Sbjct: 3365 AEDVDSPPNG---QIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLIQATDSGIPAMSSTVTVNIDISDVNDNGPVFTPANY 3451
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A+D D +N +QY+I++ F ID +G++ T LD + ++
Sbjct: 2307 LQVVASDADSENNK-VVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQST---- 2361
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG P +S + I V D+NDN P+F+++ Y
Sbjct: 2362 ---------------------LKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIY 2399
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ T LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVIYTADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I +ED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPL 1147
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 32 SIDKETGI-VKTLYALDRDD-PEREKEIYI--TTDIRVQALDRDDPEREKEIYITVIAED 87
+ID++ G + YAL D PE+ E++ + + L D ER+ +V+A D
Sbjct: 2838 AIDRDWGANGQVTYALHSDSSPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFSVVASD 2897
Query: 88 NGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
G LS + +TV DINDN P+F Y
Sbjct: 2898 LGEAFSLSSTILVSVTVTDINDNAPVFGHEMY 2929
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ +LD
Sbjct: 1796 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIASLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ ++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGNPQLTAESPAEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ + ++Y+
Sbjct: 746 LKIKAFDADSGFNGKVV--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----QTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGRPQKSSWRLLTINVEDANDNRPIFLQESY 836
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +FSI+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DAQQFSINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A DR ++G Q S T+K+ ++D+ND P F Y
Sbjct: 901 -SLKIEARDR---------------SESGQQQFS-VVTLKVFLDDVNDCSPTFIPTSY 941
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y + + G FS+D +GI+
Sbjct: 3152 RVQATDPDLGINRKVV-YSLADSAG--GYFSVDSSSGII--------------------- 3187
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
I Q LDR E + I+V A D + LS T+ ITV DINDN P+F+R Y
Sbjct: 3188 -ILEQPLDR---ELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDY 3241
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A FSI++ TG+++T LD PE + I
Sbjct: 492 LSVSASDKDKGENG-YITYSI--ASLSALPFSINQFTGVIRTTEELDFESSPENYRFI-- 546
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I + ++NDN P+F++V
Sbjct: 547 -----VRASDWGSPYRHESEVNVT------------------IRIGNVNDNRPLFEKV 581
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDPGAYG-QISYTIINDFA-KDRFLIDSNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRESP-MEGDISIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFLTVEY 2605
>gi|332211631|ref|XP_003254918.1| PREDICTED: protocadherin-16 [Nomascus leucogenys]
Length = 3297
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y ++ PG + FSID +GI+ T +LD
Sbjct: 492 VRVTARDPDQGTNG-QVTYSLV--PGAHSHWFSIDPTSGIITTAASLDY----------- 537
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 538 --------------ELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 582
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1668 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1711 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1750
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1125 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1170
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1171 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1210
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1603 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1653
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2190 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2241
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2242 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2274
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FD Y
Sbjct: 428 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDHHLY 476
>gi|241121657|ref|XP_002403288.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493397|gb|EEC03038.1| protocadherin fat, putative [Ixodes scapularis]
Length = 2933
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N + Y + + R FSID+ +GIV LDR
Sbjct: 1868 KVHATDRDLGFNR-RVSYSFVDSA--RGHFSIDETSGIVMLNRPLDR------------- 1911
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D+GTPQLS T+ + V+D+NDN P F R Y
Sbjct: 1912 ------------EERATFNLTVQASDHGTPQLSSLATLLVVVQDVNDNPPEFSRKFY 1956
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N + A E FSID +TG VK LD +D
Sbjct: 1971 LKVLATSRDSGLNAEVTYF--FSAGNELGHFSIDAKTGSVKVAKPLDYEDV--------- 2019
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ ++TV+A D G P LS+ ++ ++V D ND P+F
Sbjct: 2020 ----------------RDYFLTVLARDGGLPALSNQASVNVSVTDYNDCPPVF 2056
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 28/103 (27%)
Query: 17 IQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER 75
+QY +++ G+R +F+IDKETG + +LDR E
Sbjct: 2091 LQYAVVR--GDRHGQFAIDKETGYISVAASLDR-------------------------EM 2123
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V D GTP LS + I D+NDN P F + Y
Sbjct: 2124 ISNYVLEVECTDGGTPPLSSKVLVNIEASDVNDNPPHFAQANY 2166
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F +D TG V TL ALDR E TV A D+G
Sbjct: 1583 FRVDAITGTVTTLVALDR-------------------------EAVPSYNFTVSARDDGL 1617
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P S + + V D+NDN P F R +Y
Sbjct: 1618 PPRSATTWVFVEVVDVNDNAPAFARPRY 1645
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA+D D +N +QY + + F ID G++
Sbjct: 1022 LKVHASDRDTGANA-RVQYSL--EASALSTFHIDPVEGVI-------------------- 1058
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
D+RV D E + ++ V A D G+P LS + +TV D+NDN P F ++ Y
Sbjct: 1059 -DLRVPL----DHEAQPLYHLVVTATDAGSPSALSSTAHVWVTVLDMNDNPPAFPQLSY 1112
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV--EDINDNEPMFDRVQY 118
I V LDR ER+ E Y+ + AE +LS T+ +TV D NDN PMFD Y
Sbjct: 1490 ILVGELDR---ERQAEYYLAIRAET----ELSLVATVDVTVLVNDENDNAPMFDSASY 1540
>gi|158260375|dbj|BAF82365.1| unnamed protein product [Homo sapiens]
Length = 889
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 507 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 551
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 552 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 596
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 228 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 270
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 422 DHEIPFRLRPVF-SNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 480
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 481 NDNAPVF 487
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 637 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 671
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 672 VSRSSSAKVTINVVDVNDNKPVF 694
>gi|338729309|ref|XP_003365866.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Equus
caballus]
Length = 1026
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N I AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGIDAPSE---FNLDRRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L+ T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|405977654|gb|EKC42093.1| Protein dachsous [Crassostrea gigas]
Length = 643
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V ATD D N + Y II P + F I TG + T
Sbjct: 466 VNVMATDPDLGENA-RVTYSIISNPSSDSDWFEISDTTGFITT----------------- 507
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E +ITVIA D+G+P LS T+ IT++D+ND EP+F+R Y
Sbjct: 508 ------KSTANIDCEHNSNPWITVIATDHGSPPLSSTATVSITIDDVNDLEPVFERSYY 560
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 37 TGIVKTLYALDRDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSD 95
+G + ++ L+ + +Y+ D+ + LD D+ ++ + I V D GTPQ S
Sbjct: 155 SGNQENMFKLETKTTGSQNTLYL--DLVLNGKLDYDNGVKKYSLIIQV--SDGGTPQRST 210
Query: 96 ACTMKITVEDINDNEPMFDRVQY 118
T+ + V D NDN P F +Y
Sbjct: 211 DLTVTVNVLDANDNAPEFTHTKY 233
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNG--TPQLSDACTMKITVEDINDNEPMFDRVQY 118
R++ L D E +T+ AED+G P L + + V+D+NDN P F++ Y
Sbjct: 395 RIKILKPLDRETYSNYNLTITAEDSGPGGPPLYATKSFTLIVDDVNDNAPKFNKTVY 451
>gi|334311224|ref|XP_001380930.2| PREDICTED: cadherin-related family member 2 [Monodelphis domestica]
Length = 1403
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ + A D D P +N I++ ++ P F++D TG++K LDR+
Sbjct: 689 VNIQAYDNDEPNTNNSEIRFELLPGPYSN-NFTLDPVTGLLKNQGPLDRE---------- 737
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP +I +TV+ D G P L+ + I VEDINDN+P+F R Y
Sbjct: 738 ----------AIDPLLLGKIVLTVLVYDLGEPSLNTTVNVTINVEDINDNKPVFGRATY 786
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ + + VIA D+ + T+ I VEDIND+ P F++ QY
Sbjct: 526 DFEKKQTMEVEVIASDS-VSYMGSTATVTIHVEDINDHAPEFNKTQY 571
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 513 LQVLAHDRDEGLNS-VLSYALAETPETHAQWFQIDPQTGLITTRSHID------------ 559
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 560 -------------CETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFY 605
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 212 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGLMTVNITIQDV 268
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 269 NDNQPIFNQSRY 280
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y + + ER F+ID +G + +
Sbjct: 943 HAHDKDSGSSG-QVTYSLAR---ERQLFAIDPRSGHL----------------------V 976
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R + V A D G P L+ T+ + V+D+NDN P+F+R +Y
Sbjct: 977 LSQHLDYETSQRHT---LVVTATDGGVPPLATNLTILVDVQDVNDNPPVFERDEY 1028
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+ATD+D N I YRI+ A G + G + AL IY+
Sbjct: 1043 VQVNATDLDT-GNNARITYRIVDA-GADNATAPAAAGG--SSDVALHFGIFPNSGWIYLR 1098
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +R + + ++A DNGTP + + V D NDN+P F R QY
Sbjct: 1099 A-----PLDRETRDRYQ---LVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQY 1148
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ ATD D N +I Y I+K FSID TG+++T LD + E+ IY
Sbjct: 1267 VRIRATDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPATGVIRTRVLLDHE----ERSIY 1321
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A D G P +++ V D+NDN P F
Sbjct: 1322 ---------------------RLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTF 1355
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID +TG + ALD + E +
Sbjct: 295 LQVYASDTDAEENG-LVEYAINRRQSDKEQMFRIDPQTGAIFINKALDFETKELHE---- 349
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V+A+D+G L + I V D+NDN+P +
Sbjct: 350 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 383
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 438 RDSSIYLV--IVNLPLDR---ESTSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 492
Query: 113 FDRVQY 118
F++ Y
Sbjct: 493 FEQELY 498
>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
Length = 4557
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 24 APGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81
+PG A F+ K+ G + L R ER K + + +D D E K+ Y+
Sbjct: 3250 SPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISVIDSLDYEMCKDFYL 3309
Query: 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A+D GTP LS T+ I + D+NDN P F++ Y
Sbjct: 3310 VVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVY 3346
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD P NG Q R G+R +F++D G++K LDR
Sbjct: 3365 AEDVDSPPNG---QIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLIQATDSGIPAMSSTVTVNIDISDVNDNGPVFTPANY 3451
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A+D D N +QY+I++ F ID +G++ T LD + ++
Sbjct: 2307 LQVVASDADS-ENNKVVQYQIVQDTYNSTDYFHIDSTSGLILTARMLDHESVQQST---- 2361
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG P +S + I V D+NDN P+F+++ Y
Sbjct: 2362 ---------------------LKVRATDNGFPPMSSEVLVNIYVTDMNDNPPIFNQLIY 2399
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ T LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVIYTADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I +ED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPL 1147
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 32 SIDKETGI-VKTLYALDRDD-PEREKEIYI--TTDIRVQALDRDDPEREKEIYITVIAED 87
+ID++ G + YAL D PE+ E++ + + L D ER+ +V+A D
Sbjct: 2838 AIDRDWGANGQVTYALHSDSSPEKIMEVFSIDSNTGWISTLKDLDHERDPTFAFSVVASD 2897
Query: 88 NGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
G LS + +TV DINDN P+F Y
Sbjct: 2898 LGEAFSLSSTILVSVTVTDINDNAPVFGHEMY 2929
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ +LD
Sbjct: 1796 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIASLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ ++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGNPQLTAESPAEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ + ++Y+
Sbjct: 746 LKIKAFDADSGFNGKVV--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----QTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGRPQKSSWRLLTINVEDANDNRPIFLQESY 836
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y + + G FS+D +GI+
Sbjct: 3152 RVQATDPDLGINRKVV-YSLADSAG--GYFSVDSSSGII--------------------- 3187
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
I Q LDR E + I+V A D + LS T+ ITV DINDN P+F+R Y
Sbjct: 3188 -ILEQPLDR---ELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDY 3241
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +FSI+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DAQQFSINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A DR ++G Q S T+K+ ++D+ND P F Y
Sbjct: 901 -SLKIEARDR---------------SESGQQQFS-VVTLKVFLDDVNDCSPTFIPTSY 941
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A FSI++ TG+++T LD PE + I
Sbjct: 492 LSVSASDKDKGENG-YITYSI--ASLSALPFSINQFTGVIRTTEELDFESSPENYRFI-- 546
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I + ++NDN P+F++V
Sbjct: 547 -----VRASDWGSPYRHESEVNVT------------------IRIGNVNDNRPLFEKV 581
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDPGAYG-QISYTIINDFA-KDRFLIDSNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRESP-MEGDISIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFLTVEY 2605
>gi|358337557|dbj|GAA29810.2| protocadherin-11 X-linked, partial [Clonorchis sinensis]
Length = 1031
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D N ++YR+I P E F +D + G TL+
Sbjct: 634 QVQALDADSGKNS-EVEYRLIANPHE--AFQLDMKKG---TLW----------------- 670
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
RV LDR E+E E+ + + A D G+PQLS C +KI + D+ND+ P +
Sbjct: 671 --RVGTLDR---EKEAEVELRIEARDLGSPQLSSTCIVKIEILDVNDHAPYW 717
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ LDR E++ + + ++A D G PQ + T+ + + D+NDN P F + Y
Sbjct: 247 IRPLDR---EKKSDYWFHLLAIDGGNPQRTGTLTIHLRLTDLNDNAPKFSKPVY 297
>gi|242006694|ref|XP_002424182.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
gi|212507523|gb|EEB11444.1| protocadherin fat 2 precursor, putative [Pediculus humanus corporis]
Length = 4716
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N I Y I+ E KF I+++TG+VK + LD
Sbjct: 3336 VRVLATSKDTGINA-EISYSIVGG-NEHKKFEINQKTGVVKIVEPLDF------------ 3381
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER K+ +T+ A D G P LS+ T+ ITV D NDN P+F ++ Y
Sbjct: 3382 -------------ERAKDYLLTIQATDGGVPPLSNHATVNITVTDSNDNPPVFIQMSY 3426
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D N I Y+I A ++ F+ID +GI+KT ER+
Sbjct: 1257 VELSATDADLDPNN-KIFYKI-TAGNPQSYFTIDSISGIIKTT--------ERK------ 1300
Query: 61 TDIRVQALDRDD-PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++ E EI IT DNGTPQLS + I+V D+ND+ P F++ Y
Sbjct: 1301 -------LDRENQSEHSLEITIT----DNGTPQLSSTTKVIISVSDVNDHAPEFNQPYY 1348
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D DPP + + Y I G FSID E G +KTL D
Sbjct: 1154 VQAVDQDPPGDDSKVSYYIKGGDG-VGYFSID-ENGQIKTLAVFDV-------------- 1197
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++TV AED+G LS + + +E++NDN P+ D Y
Sbjct: 1198 -----------ETKSHYWLTVYAEDHGVIPLSSRLEVYVAIENVNDNSPLTDEPIY 1242
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y I + E F I+ ++GIV L LDR
Sbjct: 3233 KLHATDKDIGINR-KIKYTFIDSANEH--FKIEPDSGIVTLLKPLDR------------- 3276
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ +++ A D GTPQLS + + V DINDN P F Y
Sbjct: 3277 ------------EQKATYNLSIKAFDQGTPQLSQITKLLVLVLDINDNPPEFAYKTY 3321
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG I Y II G+R +F IDK+ G + LDR
Sbjct: 3441 LQVTANDLDSNLNG-QISYSIIN--GDRQNQFRIDKDNGYLIVNAPLDR----------- 3486
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + A D+G P+LS + + + + D NDN P+F + Y
Sbjct: 3487 --------------EMISSYVLEIQATDHGIPELSSSVLVNLEISDFNDNPPLFSQDNY 3531
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V+ATD D N G + Y +I + FS+D GI+ LDR+ +++Y
Sbjct: 936 FRVNATDKDL-GNNGIVSYHLIT---DTKDFSVDPVQGILFVSSGLDRE----RQDLY-- 985
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++++A+D + +D G P L ++I ++D+NDN P+F Y
Sbjct: 986 -ELKIRAVDGGE-------------KDTGKPSLYSDAIVQIHIDDVNDNAPVFALPSY 1029
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 15 GTIQYRII-----KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALD 69
GT +R+I ++ +F I ++ + +D PE E IY+ +
Sbjct: 2397 GTSIFRVIVKDNDTGINQKVRFEIQMDSSNSSEYFHID---PE-EGTIYLKKSL------ 2446
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV+A D G P LS + + V D+NDN P F++ Y
Sbjct: 2447 --DHEVNSYHHFTVVANDLGVPSLSSTSHVWVNVIDMNDNPPKFEQPSY 2493
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 25/85 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID +TG +K + LDR ER E + + D G
Sbjct: 859 FKIDSDTGELKVIGYLDR-------------------------ERTDEYLLNISVFDLGR 893
Query: 91 PQLSDACTMKITVEDINDNEPMFDR 115
PQ S + + IT+ DINDN P+F++
Sbjct: 894 PQKSSSKILPITILDINDNPPIFEK 918
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D N ++Y + + G+ A F+ID TG ++TL LD+
Sbjct: 2920 LRVIAHDNDS-GNNKEVRYSLTQDNGDLANIFAIDSYTGWIRTLVPLDK----------- 2967
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ E ++A DNG + ++ + ++D NDN P+F Y
Sbjct: 2968 --------------EKNPEYNFQIMATDNGIQKHFARTSVHVKLKDYNDNPPVFTSEHY 3012
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 34/120 (28%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A D+D S Y GE A KFS+DK G +KT LDR++ + + +
Sbjct: 3129 SIEAVDIDEQSTSNLRFY----LTGEGAEKFSLDKTLGHLKTALPLDREEQSKYQLV--- 3181
Query: 61 TDIRVQALDRDDPERE--KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD P+ E E+Y I + D+NDN P F++ Y
Sbjct: 3182 ----AHVQDRDKPKWECSSEVY--------------------ILISDLNDNPPQFEKEMY 3217
>gi|260828412|ref|XP_002609157.1| hypothetical protein BRAFLDRAFT_249059 [Branchiostoma floridae]
gi|229294512|gb|EEN65167.1| hypothetical protein BRAFLDRAFT_249059 [Branchiostoma floridae]
Length = 1103
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D D S G ++Y ++ KFSI++++G++KT ALDR++
Sbjct: 860 LQVYASDPDSGS-AGAVRYSLLTGT---EKFSINEKSGVIKTTAALDREEAA-------V 908
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+R+QA D+D+ + LS T+ +T++D+NDN P F
Sbjct: 909 HSLRIQARDQDE-----------------SYPLSSVVTVTVTLQDLNDNAPKF 944
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 29/97 (29%)
Query: 14 GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
GG I+Y + G+ KF +D+ TG+++ + LD +D
Sbjct: 976 GGEIRYSL--QDGDEGKFDVDRLTGVIRLVGMLDFED----------------------- 1010
Query: 74 EREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDN 109
+++Y IT A+D G+PQL+ C +++ V DIN+N
Sbjct: 1011 ---RQVYNITARAKDKGSPQLTSTCKIEVEVIDINEN 1044
>gi|324499655|gb|ADY39858.1| Protocadherin-like wing polarity protein stan [Ascaris suum]
Length = 2637
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA----KFSIDKETGIVKTLYALDRDDPEREKE 56
MQ+ ATD+D SN + Y I +RA F +D+ +G ++ LDR+
Sbjct: 813 MQITATDLDAGSNA-FVDY-FIDVNDKRALKVDAFKLDRSSGTLRVHKKLDREQ------ 864
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
DI V I VIA D G P LS + T+ + + D+NDN P F+
Sbjct: 865 ----NDIHV---------------IPVIARDRGNPSLSSSATVTVVLSDVNDNAPQFESC 905
Query: 117 QY 118
+Y
Sbjct: 906 RY 907
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D+D NG ++Y + + G I+ +G+++T LDR+ T D
Sbjct: 301 VFARDLDAGLNG-EVEYSLSETEGSNL-LRINPSSGVIQTAAELDRE----------TLD 348
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++V A D G P +S + ++IT+ D+NDN P+F+ Y
Sbjct: 349 V---------------IRLSVFATDKGDPPMSSSALVEITILDVNDNCPVFEMGSY 389
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D +N I Y I + F+ID++TG++ LDR+ + Y+
Sbjct: 712 IHLQAEDGDRGTNA-MITYTI-----DSPDFAIDEKTGLITVASDLDRE----VRTTYV- 760
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V +D+ +P L+ + T++I +ED+NDN P+F Y
Sbjct: 761 --------------------VNVTVQDHASPPLTASTTIEIILEDVNDNAPVFSSSNY 798
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 31 FSIDKETG---IVKTLYALDRDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAE 86
F++D++ G IV+ Y+LD + I+ I+++ LDR E+ + + V A+
Sbjct: 510 FAVDQDVGTNGIVR--YSLDEGSSSGFEINAISGSIKIRGELDR---EKNETHILKVRAK 564
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFD 114
D G P LSD + I + D+NDN P F+
Sbjct: 565 DGGDPPLSDTIIITIHLRDVNDNAPYFE 592
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 29/113 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y I+ + + FSID + G+V LD
Sbjct: 404 IQLKATDADFGENG-KVHYSIVASGA--SGFSIDYDNGMVFLREKLD------------- 447
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R + + + A+D+ P S T + V D+ND+ P+F
Sbjct: 448 -------------TRLSPVSLIIRAKDSSQPAQSSTVTCTVYVADVNDHAPLF 487
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 490 VRVTARDPDQGTNG-QVTYSL--APGSHTRWFSIDPTSGIITTAASLDY----------- 535
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 536 --------------ELEPQPQLIVVATDGGLPPLTSSATVSVALQDVNDNEPQFQRTFY 580
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1446 LTLRATDPDLGANG-QVTYGGIS--GE--SFSLDPDTGVLTTLRALDR------------ 1488
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1489 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPAF 1528
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V+A+D D NG + Y + + + F I +TG V TL LDR
Sbjct: 1123 RVYASDRDSGPNG-RLTYSLRQMSEDSKAFRIHPQTGEVTTLQTLDR------------- 1168
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1169 ------------ERQSSYQLLVRVQDGGSPPRSATGTVHIAVLDLNDNSPTF 1208
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D +G + T LDR EI+
Sbjct: 1968 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPASGTITTTAILDR-------EIWA 2018
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2019 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2052
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2338 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2384
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1381 VRPLDR---EHRAEHLLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1431
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 425 RQLDRE----ERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNVPAFDRQLY 474
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1549 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1592
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1593 -----------EVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAF 1632
>gi|348546115|ref|XP_003460524.1| PREDICTED: protocadherin gamma-A1-like, partial [Oreochromis
niloticus]
gi|348546117|ref|XP_003460525.1| PREDICTED: protocadherin gamma-A1-like, partial [Oreochromis
niloticus]
Length = 606
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A DR E E E ITV A D+GTP LS +++ + D+NDN P+FD+ Y
Sbjct: 412 ITVSAFDR---ELEPEYNITVRASDSGTPSLSSTTVLRLRISDVNDNAPLFDKNSY 464
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ KE+ V A+D G+P LS T+KI ++D NDN P
Sbjct: 521 VHAVRSFDYEQLKELKFLVRAQDGGSPPLSSNVTVKIIIQDQNDNPP 567
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E +I + +IA D G P S + ITV D NDN P+F++ Y
Sbjct: 208 DRESEPKISLKLIAIDGGNPHRSGTVNIDITVLDANDNPPVFNQSLY 254
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 524 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 570
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 571 -------------CETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 616
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y ++K G + F+ID +G + I
Sbjct: 954 HAHDKDSGSSG-QVTYSLVKDSG-KGLFAIDARSGHL----------------------I 989
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 990 LSQHLDYESSQRHTLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEY 1041
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2360 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2407
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2408 ---------------RDIYKLKIIASDEGVPQMTGTATIRVQIVDVNDNQPTF 2445
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 223 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 279
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 280 NDNQPIFNQSRY 291
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1056 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1101
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +TV+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1102 SGWIYLRAPLDREARDRYQ---LTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1158
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1277 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE--------- 1326
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G+P +++ V D+NDN P F
Sbjct: 1327 -----------------ERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTF 1365
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIK------APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
ATD D +NG +QYR+I+ E+A FS+D TG + LD + + I
Sbjct: 1528 ATDADTGTNG-DLQYRLIRYFPQLNESQEQAIFSMDSLTGALSLQAPLDFEAVQEYLLI- 1585
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
VQALD+ N T +L + T+++ V D NDN P F
Sbjct: 1586 ------VQALDQ---------------SSNVTERLQTSVTVRLQVLDANDNAPQF 1619
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1989 VQISAVDADLGVNARLV-YSL--ANETQWQFAIDSQSGLITTVGKLDR------------ 2033
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 2034 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYPY 2079
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 306 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 347
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 348 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 394
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1866 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSRSGELSARP 1925
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1926 LDR---EQNSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1974
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++V+A D GTP L + ++ + + D+NDN P F++ Y
Sbjct: 472 LSVVATDKGTPPLHASKSIFLRITDVNDNSPEFEQDLY 509
>gi|338729307|ref|XP_001500396.3| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Equus
caballus]
Length = 1296
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N I AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGIDAPSE---FNLDRRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L+ T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|292616200|ref|XP_001920988.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2518
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D +NG + Y + FSID ETG++ T DR
Sbjct: 397 LQVHADDADEGANG-KVTYGFMHKDSTVPAFSIDPETGVIVTAIKFDR------------ 443
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++E +TV A D L C + I + D NDN P F+ ++Y
Sbjct: 444 -------------ESQREYAVTVTATDQAADPLIGICQLNILILDENDNNPKFENLRY 488
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E+ + ++ ++A D+GTP L+ T+++ + D+NDN P F+
Sbjct: 1308 DREKVAQHHLVILAADHGTPPLTGTATIQMALLDVNDNGPEFE 1350
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG I Y ++ G+ F ID E G + T DR+ K Y+
Sbjct: 715 LQVSANDLDLGLNG-KISYSLLNDRSGDFQYFRIDPELGTIFTEAVFDRE----TKGSYL 769
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+++D + R + +G P SD ++I + D+NDN+P+F + Y
Sbjct: 770 ---LEVKSVDGWESARPGK---------HGQPN-SDTAYVRIFISDVNDNKPVFAQPVY 815
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D ++ ++Y + G ++F ID+ TG + LDR+
Sbjct: 933 LQVTASDPDKDADQEALRYSL-HGQGAESEFIIDEVTGKIYAQRTLDRE----------- 980
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V+A+ R V+A D G L+ + I V DINDN P+F
Sbjct: 981 ----VRAVWR----------FVVLATDEGGEGLTGFTDVIINVWDINDNAPIF 1019
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+ AL D ER+KE + VI D+G+P + T+ IT+ D ND+
Sbjct: 1416 ITALRAFDRERQKEFLLPVIMTDSGSPPKTVTNTLTITIGDENDH 1460
>gi|300796539|ref|NP_001179233.1| cadherin-related family member 2 precursor [Bos taurus]
gi|296485562|tpg|DAA27677.1| TPA: protocadherin 24 [Bos taurus]
Length = 1279
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ +P FS+D + GI++ L LDR+
Sbjct: 607 IQAHDND-QPDTNNSLLHFSLLPSPFSH-NFSVDPDKGILRNLGPLDREAI--------- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I ++V D+G P L ++ ITVEDINDN P+F++ +Y
Sbjct: 656 -----------DPALGGRIVLSVNVSDSGEPALWTTVSVTITVEDINDNLPIFNQSRY 702
Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ A+D D GG + Y ++ PG A F++D ++G V R E+
Sbjct: 505 IRASDPDT-GEGGRVTYSLL--PGNGADIFAVDPDSGKVTV----------RNSEL---- 547
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
LDR E++ Y+T+ A D G LS + T++I V D+NDN P+
Sbjct: 548 ------LDR---EKQAVYYLTLQATDGG--NLSSSTTLQIHVLDVNDNSPV 587
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 524 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 570
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 571 -------------CETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 616
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y ++K G + F+ID +G + I
Sbjct: 954 HAHDKDSGSSG-QVTYSLVKESG-KGLFAIDARSGHL----------------------I 989
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 990 LSQHLDYESSQRHTLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY 1041
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2343 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2390
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2391 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2428
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 223 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 279
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 280 NDNQPIFNQSRY 291
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1056 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1101
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +TV+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1102 SGWIYLRAPLDRETRDRYQ---LTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1158
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1277 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE--------- 1326
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G P +++ V D+NDN P F
Sbjct: 1327 -----------------ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTF 1365
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1972 VQISAVDADLGVNARLV-YSL--ANETQWQFAIDGQSGLITTVGKLDR------------ 2016
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 2017 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPY 2062
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1849 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1908
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1909 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1957
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 306 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 347
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 348 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 394
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 449 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 503
Query: 113 FDRVQY 118
F++ Y
Sbjct: 504 FEQDLY 509
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 26/102 (25%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I Y I+ E KF ID +TG+V LD ER
Sbjct: 1994 IYYSIVGG-NEHKKFQIDAKTGVVTIAELLDY-------------------------ERA 2027
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ ++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 2028 RDYFLTIQAVDGGIPPLSNHATVNITVTDSNDNAPIFSEVSY 2069
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNG 89
S D +TGI K YA+ D +I D V L R D E + + TVIA D G
Sbjct: 1048 SRDNDTGINQKVRYAIQNDTENSTDLFHIDPDEGVIFLKRSLDHETRESHHFTVIAMDRG 1107
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ++V D+NDN P F++ Y
Sbjct: 1108 VPSLSSTAHVWVSVIDMNDNPPKFEQPSY 1136
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV+A D+D NG + Y I + G+R K FSID++TG + LDR+ E Y+
Sbjct: 2085 QVYANDLDSEENG-NVSYYIER--GDRQKQFSIDRKTGQITVAAPLDRE----EIANYV- 2136
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D+G P LS + I + D NDN P+F Y
Sbjct: 2137 --------------------LEVHARDSGIPMLSSFVMVNIEIMDANDNPPLFSLPNY 2174
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 1563 LKVIAHDKDLGSNG-EVRYSFGSDIGELANVFTVDAYTGWISTLVQLDK----------- 1610
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 1611 --------------EKQPEYKFQVVATDNGNPKHFARASVHVKLKDYNDNAPAF 1650
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV LDR+ K +Y
Sbjct: 1876 KVHATDDDIGINR-KIRYEFIDSAD--GHFFIAADSGIVTLGKPLDRE----TKAMY--- 1925
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +QALD+ GTPQL ++ + V+DINDN P F Y
Sbjct: 1926 NVTIQALDQ------------------GTPQLMGVASLIVNVQDINDNPPEFASKVY 1964
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR+ R I
Sbjct: 1771 LTVLATDYDDEPNA---KLRFYLTGENNDKFSLDKETGVLKTVGQLDRETQARYSLI--- 1824
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DRD P E + ++I + D+NDN P F Y
Sbjct: 1825 ----AHVQDRDKPMWEC------------------SSQLEILISDLNDNAPRFTMQTY 1860
>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
Length = 3188
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GIV T LD
Sbjct: 491 VRVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIVTTAALLDY----------- 536
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P LS + T+ + ++D+NDNEP F R Y
Sbjct: 537 --------------ELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFY 581
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1559 LTLQATDPDLGANG-QVTYGGIS--GE--NFSLDPDTGVLTTLRALDR------------ 1601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1602 -------------EEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAF 1641
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1124 RVFATDRDSGING-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1169
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1170 ------------ERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 1209
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1494 VRSLDR---EQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1544
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + ++V D+NDN P+F R Y
Sbjct: 2451 DFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAY 2497
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 427 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 475
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1662 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1705
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1706 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSY 1750
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2081 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2131
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2132 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2165
>gi|301756110|ref|XP_002913894.1| PREDICTED: protocadherin-23-like [Ailuropoda melanoleuca]
Length = 3357
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T +LDR E ++ + + V+A+D G
Sbjct: 593 FTIDPESGMISTFRSLDR-------------------------EVQEAVELRVVAQDLGE 627
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L+ C + ITV+D+NDNEP+F R Y
Sbjct: 628 PPLTATCLVSITVDDVNDNEPIFRRQVY 655
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G + Y II E F +DK +G++ T LD
Sbjct: 1625 VHHISAQDPDEGRNGRVTYSIISG-NENMAFMLDKSSGLLTTTCPLD------------- 1670
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I+ Q + +T++A D+G P LS + T+ ITV D+ND P+F + Y
Sbjct: 1671 YEIKAQHI------------LTLLALDDGIPALSSSQTLTITVLDVNDEAPVFQQKLY 1716
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ K + ++A D+G P LS T+ I V D+NDN P F ++Y
Sbjct: 2605 VLLHSLDREAAASHK---LVILASDHGFPPLSSTATVAIEVLDVNDNPPKFHSLKY 2657
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +TV A D G P+LS +KI V DINDN P F
Sbjct: 2293 DYELTSSYSLTVQATDKGMPRLSSTSVIKIQVTDINDNAPAF 2334
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 29/111 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N Q+ I+ PG + F I+ +TG+V T ALDR+ +E++
Sbjct: 1732 RVEAMDRDSGINS-KFQFEIM--PGASSGFFKINPDTGVVVTTTALDRE----VREVF-- 1782
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ V+ D G P LS T+ TVED ND+ P
Sbjct: 1783 -------------------SLRVLVRDGGVPSLSSTATILCTVEDENDHAP 1814
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + V+A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGTFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASNAY 2369
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D + I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSMVSIVLLDINDFVPVFEPSPY 2264
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 471 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 517
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 518 -------------CETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 563
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y ++K G + F+ID +G + I
Sbjct: 901 HAHDKDSGSSG-QVTYSLVKESG-KGLFAIDARSGHL----------------------I 936
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 937 LSQHLDYESSQRHTLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY 988
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2290 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2337
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2338 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2375
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 170 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 226
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 227 NDNQPIFNQSRY 238
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1003 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1048
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +T++A DNGTP + + V D NDN+P F + +Y
Sbjct: 1049 SGWIYLRAPLDRETRDRYQ---LTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1105
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1224 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE--------- 1273
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G P +++ V D+NDN P F
Sbjct: 1274 -----------------ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTF 1312
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1919 VQISAVDADLGVNARLV-YSL--ANETQWQFAIDGQSGLITTVGKLDR------------ 1963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 1964 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPY 2009
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG SI + E G++ T+ A D D+ IY T ++ +
Sbjct: 1796 PGSCYGLSIPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1855
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1856 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1904
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 253 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 294
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ALD + E + + V+A+D+G L + I V D+NDN+P + +
Sbjct: 295 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVI 343
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 396 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 450
Query: 113 FDRVQY 118
F++ Y
Sbjct: 451 FEQDLY 456
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 471 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 517
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 518 -------------CETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 563
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y ++K G + F+ID +G + I
Sbjct: 901 HAHDKDSGSSG-QVTYSLVKESG-KGLFAIDARSGHL----------------------I 936
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 937 LSQHLDYESSQRHTLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY 988
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2290 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2337
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2338 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2375
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 170 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 226
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 227 NDNQPIFNQSRY 238
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1003 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1048
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +TV+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1049 SGWIYLRAPLDRETRDRYQ---LTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1105
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1224 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE--------- 1273
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G P +++ V D+NDN P F
Sbjct: 1274 -----------------ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTF 1312
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1919 VQISAVDADLGVNARLV-YSL--ANETQWQFAIDGQSGLITTVGKLDR------------ 1963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 1964 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPY 2009
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1796 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1855
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1856 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1904
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 253 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 294
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 295 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 341
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 396 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 450
Query: 113 FDRVQY 118
F++ Y
Sbjct: 451 FEQDLY 456
>gi|344265742|ref|XP_003404941.1| PREDICTED: cadherin-related family member 2 [Loxodonta africana]
Length = 1287
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P + FS+D +TG+++ L LDR+
Sbjct: 586 IQAHDDD-EPNTNNSRLYFSLLPGPYSQ-NFSVDPDTGLLENLGPLDREAI--------- 634
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV D G P LS + I VEDINDN P+F++ Y
Sbjct: 635 -----------DPTLAGRIVLTVRVADGGVPVLSAEVNVTINVEDINDNLPVFNQSSY 681
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D GG I Y ++ G F ++ ++G V RD ++E T +
Sbjct: 484 IHATDPDT-GEGGHITYSLLAGNGVEL-FEVNPDSGTVTV-----RDSKLLDRETQATYN 536
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ +QALD + LS T++I +EDINDN P+
Sbjct: 537 LTLQALDGGN--------------------LSGTTTLQIILEDINDNAPV 566
>gi|443706937|gb|ELU02771.1| hypothetical protein CAPTEDRAFT_215553 [Capitella teleta]
Length = 1997
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 2 QVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V ATD D PS+ G +QYRI G KF ID+++G+
Sbjct: 711 KVTATDADSPSSPNGKVQYRI--GSGSAEKFVIDQDSGV--------------------- 747
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I V D + ++ + VIA+D G PQ S + T+ I + DIN+ P F
Sbjct: 748 --ISVAPGATFDADEQRNYTMIVIADDQGAPQFSSSATVLINIRDINNKLPYF 798
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 45 ALDRDDPEREKEIYITTDIRVQALDRDDP---EREKEIYITVIAEDNGTPQLSDACTMKI 101
A+ R ++ Y+T D AL P E +K+ VI D+G P L+ T+ +
Sbjct: 953 AIQRFQLTKDPSGYLTVDATTGALRIARPIDYETDKQFEAEVIVVDSGQPSLTSTATIVV 1012
Query: 102 TVEDINDNEPMFDR 115
V ++NDN P+F +
Sbjct: 1013 DVNNLNDNSPVFSQ 1026
>gi|260802290|ref|XP_002596025.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
gi|229281279|gb|EEN52037.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
Length = 3422
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +NG Y + G KF++D+E+GI+ L LD + +
Sbjct: 1583 QVFANDTDEGANGRVTFYL---SSGADGKFTVDRESGIISVLANLDYESLQ--------- 1630
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV A D G S T+ I+V D+NDN P FD Y
Sbjct: 1631 ----------DPN----ITLTVTASDGGEVPNSAVSTVTISVTDVNDNAPEFDTSHY 1673
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D SNG I Y I + + FS+D+ TG + TL LDR
Sbjct: 941 ISASDNDTGSNGD-ILYSIKPS---SSDFSVDQSTGQITTLQQLDR-------------- 982
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ V+A D G P LS T+ + + DINDN P+F + Y
Sbjct: 983 -----------ETSTQVQFVVVASDQGRPSLSFTATVTVILLDINDNLPIFTQQSY 1027
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 27/117 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG Y + GE F+I KETG + T LDR+
Sbjct: 1690 VFAEDTDEGGNGEVSYY--LDPSGEEVPFNISKETGEIITTEVLDREG------------ 1735
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
TV A+DNG P L+ T+ ++V D NDN P F+ Y
Sbjct: 1736 ------------DAASFTFTVFAQDNGMPTSLNSTATVTVSVTDENDNPPEFNPSTY 1780
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D NG I Y II E+ F+ID +G + LD D R ++ +
Sbjct: 1170 VMATDIDSGDNGN-ITYTIISG-NEQNTFAIDGGSGEITLETTLDHDQGNRSYQLVVE-- 1225
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A+D GTP S T+ I V + NDN P+F Y
Sbjct: 1226 ----------------------AKDAGTPIRSSTATVDILVVNENDNTPVFQNTTY 1259
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
++YR+++ P + FS+D TG++ T +LDR++ + + + D ++ E
Sbjct: 1493 LEYRLVQGPNSTSPFSVDSTTGLLNTTQSLDREETSQYS-------LNISVSDGENVEF- 1544
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVED 105
++ +T++ +++ TPQ + VE+
Sbjct: 1545 CQVQVTILDQNDNTPQFFPSNVSHFNVEE 1573
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D +NG I I + + KFSI ++ G + +LD D E Y+
Sbjct: 752 QVTATDRDSGTNGDIIYSIIFASSDGKDKFSISRD-GNITVSGSLDADTVES----YV-- 804
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G + I V ++NDN+P FD+ QY
Sbjct: 805 -------------------VVVMAADQGAASRVTTAIVNINVTNVNDNKPQFDQEQY 842
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D NG I Y I A + FSID TG + T+ LDR
Sbjct: 2019 VIATDMDLGKNG-EILYSI-TADNDNV-FSIDNTTGQITTVGQLDR-------------- 2061
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E ITV A D G+P + + ++VED+ND+ P F +
Sbjct: 2062 -----------EATAEYNITVEATDMGSPPRNTTAMVTVSVEDVNDSPPKFSNSTF 2106
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD D +NG I Y II A + + KFSI + G + +LD D E Y+
Sbjct: 430 QVTATDRDSGTNGD-ILYSIIFASSDGKDKFSISTD-GNITVSGSLDADTVES----YV- 482
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G + I V ++NDN+P F + QY
Sbjct: 483 --------------------VVVMAADQGAASRVTTAIVNINVTNVNDNKPQFGQEQY 520
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEIYI 59
+Q TD DP +N Y I + G+ + FSID+ TG + + LDRD P +
Sbjct: 1043 LQTTDTDSDPNNN---TNYIITE--GDTSVFSIDQTTGRLSLVTPLDRDGGPANFSLTVM 1097
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D+ + + V+A D + + ITV D+NDN P F + Y
Sbjct: 1098 AYNTELYDGSGDNDTATVVVSVQVLATDG---IHNSTAVVDITVTDVNDNAPEFTKDVY 1153
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I +V+A D GTP LS + +TV D+ D P+F Y
Sbjct: 1859 IRFSVVATDAGTPPLSGTAELFVTVGDVKDATPVFGNSTY 1898
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 25/116 (21%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ TD+D + + I + FSI+ +G++ + LDR++ I T+
Sbjct: 2542 IKVTDLDTAEVNTDVSFEITGG-NDYTSFSINASSGLLVSTMELDRENISSYSLIITATN 2600
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R PQL+ + +++TV D NDN P F+ Y
Sbjct: 2601 YRAD------------------------PQLNTSTVVEVTVLDQNDNSPTFNSSDY 2632
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 996 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1049
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1050 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1082
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID +G+++T ALDR+ ER
Sbjct: 361 LRVAAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEAALDRESMERH---- 415
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS V D ND+ P+F++ QY
Sbjct: 416 ---------------------YLRVTAQDHGSPRLSPH-PXXXXVADRNDHSPVFEQAQY 453
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 580 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 625
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 626 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIF 666
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 468 LQLRATDGDAPPNA-NLRYRFVGPPAARAAASAAFEIDPRSGLISTSGRVDREHMESYEL 526
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 527 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 573
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 935 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 981
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G P LS + ++ +TV D+NDN P F +Y
Sbjct: 730 DRESVEHYFFGVEARDHGIPPLSASASVTVTVLDVNDNRPEFTMKEY 776
>gi|344252662|gb|EGW08766.1| Protocadherin-11 X-linked [Cricetulus griseus]
Length = 1014
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KVSATDADTGRNA-EINYLLGFDAPPE---FALDRRTGILTAVKNLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +++ Y TV+A+DNG P L+ ++ +TV D NDN P+F +Y
Sbjct: 531 -------------ENQEKYYFTVLAQDNGIPPLTSNASVFLTVLDQNDNIPLFTHSEY 575
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNIFGLDVIETPEGEK---LPQLIVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++I+V D NDN P+F
Sbjct: 235 LQISVADTNDNGPVF 249
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAFLDFESTREYAIKILATDAGKPPLNQTSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|354493018|ref|XP_003508641.1| PREDICTED: protocadherin-11 X-linked-like [Cricetulus griseus]
Length = 1039
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V ATD D N I Y + AP E F++D+ TGI+ + LDR
Sbjct: 487 KVSATDADTGRNA-EINYLLGFDAPPE---FALDRRTGILTAVKNLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +++ Y TV+A+DNG P L+ ++ +TV D NDN P+F +Y
Sbjct: 531 -------------ENQEKYYFTVLAQDNGIPPLTSNASVFLTVLDQNDNIPLFTHSEY 575
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 182 QNIFGLDVIETPEGEK---LPQLIVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 234
Query: 99 MKITVEDINDNEPMF 113
++I+V D NDN P+F
Sbjct: 235 LQISVADTNDNGPVF 249
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAFLDFESTREYAIKILATDAGKPPLNQTSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|402894358|ref|XP_003910330.1| PREDICTED: protocadherin-16 [Papio anubis]
Length = 3345
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG Q APG FSID +GI+ T +LD
Sbjct: 540 VRVTARDPDQGTNG---QVTYTLAPGAHTHWFSIDPTSGIITTAASLDY----------- 585
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 586 --------------ELEPHPQLTVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFY 630
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1716 LTLRATDPDLGANG-----QVTYGGVSSGSFSLDPDTGVLTTLRALDR------------ 1758
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1759 -------------EEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTF 1798
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1651 VQPLDR---EQRAEHILTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1701
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1173 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1218
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1219 ------------EQQSTYQLLVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTF 1258
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2238 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2289
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2290 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2322
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 476 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQFY 524
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1819 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1862
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1863 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1902
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D ETG++ TL ALDR
Sbjct: 1668 LTLRATDPDLGANG-QVTYGGIS--GE--SFSLDPETGVLTTLRALDR------------ 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E ++EI +TV A D G+P L T+++ VED ND+ P F V
Sbjct: 1711 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSVH 1754
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 492 VRVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIITTAASLDY----------- 537
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 538 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 582
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG + TL LDR
Sbjct: 1125 RVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEMTTLQTLDR------------- 1170
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G P S T+ I V D+NDN P F
Sbjct: 1171 ------------ERQSSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTF 1210
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1603 VRSLDR---EQRAEHVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1653
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
L+ D E + +TV A D G P S A + +TV D+NDN P+F + Y
Sbjct: 2556 LESLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASY 2606
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L T + V D+NDN P FDR Y
Sbjct: 427 RQLDRE----ERDAYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTFDRQLY 476
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1771 LRASDPDVGANG-QLQYRILDGDPSGA-FILDLASGEFGTMRPLDR-------------- 1814
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1815 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAF 1854
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2190 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2240
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2241 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2274
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 827 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPVYE----- 880
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L +++TV+D+NDN P+F
Sbjct: 881 ---------------------LTAYAVDRGVPPLRTPVNIQVTVQDVNDNAPVF 913
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +N I+YR + P +A F ID +G++ T +DR+ +KE Y
Sbjct: 303 LQLRATDGDAAANA-NIRYRFVDPPAAQAVFEIDPRSGLITTSGRVDRE----QKENY-- 355
Query: 61 TDIRVQALDRDDPEREK----EIYITVIAEDNGTPQLSDACTMKITVEDI 106
++ V+A D+ + ++ITV+ E++ PQ S+ + ED+
Sbjct: 356 -ELAVEASDQGGEPGPRSATVRVHITVLDENDNAPQFSEKRYLAQVREDV 404
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N + Y II R F+ID TG ++ + LD
Sbjct: 411 LRVTATDLDKDTNA-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 456
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D+G P LS+ + I V DIND+ P+F
Sbjct: 457 -------------EVEREYALRIRAQDSGRPPLSNNTGLASIQVVDINDHAPIF 497
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V A D D G + Y + R+ F ID +G++ T LDR+
Sbjct: 195 LSVAAQDPDA-GEAGRLSYSMAALMNSRSLDLFRIDAASGLISTAEPLDRE--------- 244
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ D+ Y V A D+G+P+LS + +TV D ND+ P+F++ +Y
Sbjct: 245 -SMDLH---------------YFRVTALDHGSPRLSATTMVAVTVADRNDHAPVFEQAEY 288
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ ITV D+NDN P F + +Y
Sbjct: 561 DRESVEHYFFGVEALDHGSPPLSASASVTITVMDVNDNRPEFTQKEY 607
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + + + A+DNG PQ +D ++I V D+NDN P F
Sbjct: 766 DYEDQVTYTLAITAKDNGIPQKADTTYVEIMVNDVNDNAPQF 807
>gi|291230328|ref|XP_002735121.1| PREDICTED: GA26057-like [Saccoglossus kowalevskii]
Length = 3460
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 26/103 (25%)
Query: 17 IQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER 75
I Y+II P + F +D E+G++ T +DR E
Sbjct: 700 ITYQIIHVPNSFSNWFQVDAESGLISTATEIDR-------------------------EI 734
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + ++A+D G P LS T+ +T+ D+NDNEP FD Y
Sbjct: 735 KPSVMLHIMAQDGGNPPLSTNVTVIVTIRDVNDNEPSFDNSFY 777
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+ATD D N I Y I PG F+ID TGI ++
Sbjct: 2499 LTVNATDRDSGLNARII-YSIDVNPG--IGFTIDPHTGI-----------------LFTN 2538
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IRVQ+ +++ + A D+G P LS +++I V D+NDN PMF
Sbjct: 2539 DTIRVQS-------NPHVVHLGISATDHGEPALSSLVSVRIEVTDVNDNSPMF 2584
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D N I Y I K+ + F ID +G++ T + LD EI+ T
Sbjct: 2382 QVIATDADIGDNA-VITYSITKSEPDEQDFIIDSGSGVILTRFILDW-------EIHKTY 2433
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++A+D +G+ L+ +C +++ V D NDN P F
Sbjct: 2434 KLTIKAVD-----------------GSGSNALTSSCVVRVKVIDTNDNSPTF 2468
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D + Y II + F I +G + L LDR E
Sbjct: 2605 RVHATDADYSRENNQVDYSIISGNIDN-MFEISASSGQIAVLGDLDR-------ETLALY 2656
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VQA DR G PQ S+ T+ I VED ND+ P F+ +Y
Sbjct: 2657 TLIVQAADR------------------GEPQQSNVATVNIEVEDFNDHTPEFNEEEY 2695
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 34/126 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP--------GERAKFSIDKETGIVKTLYALDRDDPE 52
+QV A D D SNG + Y ++ + F+ID+ G+++T LDR
Sbjct: 1434 IQVTAKDPDSGSNG-VVSYDLVAGELGYLSGIFNNQVMFTIDETNGMIRTRAVLDR---- 1488
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E + ++TV+A D+G P +++ V+D NDN P
Sbjct: 1489 ---------------------ESKSSYHLTVMARDHGNPPKEAVAFVRVEVKDENDNSPK 1527
Query: 113 FDRVQY 118
F Y
Sbjct: 1528 FMNSTY 1533
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E + I + A+D+G P L + IT+ DINDN P FD+ Y
Sbjct: 621 QPLDR---EEQSSYDIKITAQDHGLPPLRTEKIVTITITDINDNAPHFDQSVY 670
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 30/113 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D D +NG I+ + FSID++TG++ T LDR
Sbjct: 1333 VSASDRDQGTNG-----EIVYSIQPDDTFSIDEQTGMISTNMMLDR-------------- 1373
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E +TV A D GTP D + I V D NDN P F+
Sbjct: 1374 -----------EANFMYTLTVTATDLGTPARQDTSVVYINVLDENDNPPEFNH 1415
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +N I+Y I E +F ID TG T LDR
Sbjct: 1973 VVATDADTGTNA-EIRYSITGG-NEGNRFVIDPITGEFSTQITLDR-------------- 2016
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + AED T L+ + + V D+NDN P+F+ + Y
Sbjct: 2017 -----------ETKHHYELEITAEDMATNPLTGTMNITVDVVDLNDNAPLFENLPY 2061
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N I Y + +A F I +TG++ T LDR
Sbjct: 1226 VTVSATDGDL-GNNARITYTL-RASQYAGNFGIFPDTGVLYTKKMLDR------------ 1271
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + VIA+DNG P S T+ I V D+NDN P Y
Sbjct: 1272 -------------ELVPDYVLEVIAKDNGDPVQSATATVIIHVTDVNDNNPRLLHESY 1316
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 29/117 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER---AKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
ATD D NG ++YR++ + FSI+K TG
Sbjct: 1121 ATDRDSGDNG-KVEYRLVDSNNMNNFDGLFSINKLTG----------------------- 1156
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++Q + E + + A D G P LS T+K+ ++D+N+N P F Y
Sbjct: 1157 --QIQIHRTVEYSEMSEYELIIEAYDKGHPSLSSVMTLKVYIQDMNNNGPQFYPTSY 1211
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M ++A D D NG + Y I+ E KF+I+ TGI+ + LDR
Sbjct: 1762 MHINALDPDFGDNGRVV-YNIVDG-NEEGKFTIEHSTGILSLVDPLDR------------ 1807
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ + + A D+G + I +ED+NDN P+F
Sbjct: 1808 -------------EQRDAYGLNISASDHGVLPRVAFQYLIIYLEDVNDNAPVF 1847
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 37 TGIVKTLYALDRDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSD 95
+G V + + LD + ++ + D+ V LDR+ R + + + A D G P +
Sbjct: 374 SGNVDSAFRLDFREGGGVRDRVLYLDLVVNNYLDRETIPRYE---LVIHAIDGGVPAKTG 430
Query: 96 ACTMKITVEDINDNEPMFDRVQY 118
+ + +T+ D NDN+P+F++ +Y
Sbjct: 431 STLLNVTITDANDNQPVFNQSRY 453
>gi|363738275|ref|XP_425119.3| PREDICTED: neural-cadherin-like [Gallus gallus]
Length = 2503
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG ++Y ++ G FSI +TG++ T+ DR
Sbjct: 432 LQVEATDADEGANG-IVKYGLMHRDGVLPAFSIHPDTGVLTTVQVFDR------------ 478
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E +TV A D L C + + + D NDN+P F+ Y
Sbjct: 479 -------------EKQREYPVTVTATDQAAEPLIGICQINVVILDQNDNDPRFENTHY 523
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD+D N G I Y ++ G+ F +D +TG + T DR+ +K Y+
Sbjct: 750 IQVSATDLDLGQN-GEITYSLLHDHGGDYTCFRLDSQTGSIYTTSVFDRE----KKGSYL 804
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+++D + R + +G P SD +++ + D+NDN+P+F + Y
Sbjct: 805 ---LEVESVDGSESARPGK---------HGRPN-SDTAYVRVFITDVNDNKPVFTQSVY 850
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ DK++G+ + + D + ++ I V ++ D E ++ + V A D GTP
Sbjct: 1300 ATDKDSGLNGNIIYSIKSDSDPMRQFVIDQHGHVIVANKLDREVIQKYSLIVQASDQGTP 1359
Query: 92 QLSDACTMKITVEDINDNEPMFD 114
+ + T+ I + D+NDN P F+
Sbjct: 1360 AETGSATVLINLLDVNDNGPRFE 1382
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D G + Y + G F+ID+ TG + LDR++
Sbjct: 968 LQVMANDPDNNVEEGDLSYSL-HGHGAADIFTIDENTGSIYAHKMLDREE---------- 1016
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+AL R V+A D G L+ + I V DINDN P+F
Sbjct: 1017 -----RALWR----------FVVLATDEGGEGLTGFADVIINVWDINDNAPVF 1054
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ AL D E++K ++ ++ D+G P +S T+ ITV D NDN F
Sbjct: 1448 ITALRSFDREKQKVFHLPIVITDSGIPVMSSTNTLTITVGDENDNCHEFGH 1498
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + +IA D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIIATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAY 798
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQY 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+ + G + L LD
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINGKNGTISLLGPLD------------- 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 957 ----VQA---------GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDITSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-VGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQALY 2159
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E +++ + + A D G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDR---ETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +++ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VVRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIVNGNMENS-FNINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 68 LDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
DR+ R + + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1161 FDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVFATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I V D NDN P F + +Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKY 2988
>gi|19924085|ref|NP_612553.1| protocadherin Fat 3 precursor [Rattus norvegicus]
gi|81867062|sp|Q8R508.1|FAT3_RAT RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
homolog 3; Flags: Precursor
gi|19773543|dbj|BAB86869.1| fat3 [Rattus norvegicus]
Length = 4555
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + L ALD
Sbjct: 3255 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVLEALDY------------ 3300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3301 -------------EMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3345
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N + Y+I++ F ID +G++ T LD
Sbjct: 2306 LQLVSTDADS-GNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2353
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2354 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2398
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3364 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3405
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3406 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3450
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ LDR
Sbjct: 1062 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADILDR------------ 1107
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1108 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1146
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1795 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1841 -------------EVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1887
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 745 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 792
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 793 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSY 835
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDN 88
++D + GI K +Y+L+ D I ++ + V Q LDR E++ I+V A D
Sbjct: 3154 AVDPDVGINRKVVYSLE-DSASGVFSIDSSSGVIVLEQPLDR---EQQSSYNISVRATDQ 3209
Query: 89 GTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3210 SPGQSLSSLTSVTITVLDINDNPPVFERRDY 3240
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2515 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F ++Y
Sbjct: 2557 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTLEY 2604
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 850 IQVEARDKDLGSNG-EVTYSVLT---DTHQFVINSSTGIVYIADQLDRE----SKANY-- 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 900 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 935
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG +QY I+ + + F+ID TGI+ T LD
Sbjct: 468 LQVTARDKDQGPNG-EVQYSIVHSHDTHSSWFAIDPATGIITTAAPLDY----------- 515
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + +TV+A D GTP LS + + + ++D+NDNEP+F
Sbjct: 516 --------------EKDPQPQLTVLATDRGTPALSSSAVVLVALQDVNDNEPVF 555
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG + Y I ++ + ID +TG + T LDR EI+
Sbjct: 2149 IQVLADDLDQGMNG-QVTYAINQSLPMTGLYHIDPQTGTITTAAILDR-------EIWSQ 2200
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A+DR GTP L + T+ + V DINDN P
Sbjct: 2201 TRLVVTAMDR------------------GTPPLVGSATLTVVVMDINDNSP 2233
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D NG ++YR+ E+ F +D +G++ T ALDR
Sbjct: 1735 LRATDPDGDENG-RLEYRVADGDPEQ-DFILDPVSGVLSTARALDR-------------- 1778
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV+ +D+GTP S T+ + V D+NDN P F + Y
Sbjct: 1779 -----------EQVAFYSLTVVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASY 1823
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A D G PQ S + ITV+D+NDN P+F R +Y
Sbjct: 2523 LTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEY 2560
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E++ Y + V A D+GTP L T + V DINDN P+FD+ +Y
Sbjct: 404 QLLDRE----ERDSYDLRVTATDSGTPPLRAESTFVLQVIDINDNPPLFDQQEY 453
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + A D GTP S T+ ++++DINDN P F++ +Y
Sbjct: 190 DRENRSSYSLVLEAYDGGTPPRSSQMTLDVSIQDINDNAPAFNQSRY 236
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG + P FSI +TG++ T + LDR++ E+
Sbjct: 1632 LQVLATDRDLGANGQVTYGGLSGGP-----FSIHPQTGLIVTTHPLDREEQEQH------ 1680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V A+D G P T++ITV D ND+ P +
Sbjct: 1681 -------------------VLMVYAQDGGLPPNLSKATVRITVGDENDHTPQLE 1715
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D G++ Y + G +FSIDK TG + T LDRD+ +
Sbjct: 575 LQVTATDADS-GLFGSLSYSLGSGIGSVVPTQFSIDKHTGHLCTTQPLDRDEGTSAYDFT 633
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT A D G L+ +K+ +EDINDN P+F + Y
Sbjct: 634 IT------------------------AVDGGG--LNSMVYVKVFLEDINDNRPVFYPLDY 667
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D+G PQLS T+ + V+ +DN P+FD + Y
Sbjct: 942 LSIVARDSGVPQLSSTFTLLVHVQAEHDNGPIFDTLTY 979
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+AL+R++ + +TV+A D+G P+ S + I V D+ND P F++ +Y
Sbjct: 1567 VRALNREEVVQHN---LTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEY 1617
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D N + YR+++ + F I +TG + T ++LDR
Sbjct: 1104 RVMASDRDAGQNS-RLTYRLLQ---HDSNFLIHTQTGELSTKHSLDR------------- 1146
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + VI +D G P S T+ +TV D NDN P+F
Sbjct: 1147 ------------ELQSSYQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPVF 1186
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IR D + P E + V A D G+P LS T+++ V D+ND+ P+F Y
Sbjct: 2393 IRPVEFDANQPTLE----LVVEARDRGSPSLSSWATVQLQVLDVNDHSPIFQVPHY 2444
>gi|355749624|gb|EHH54023.1| hypothetical protein EGM_14759, partial [Macaca fascicularis]
Length = 1346
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T+ LDR E ++ + + V+A D G
Sbjct: 601 FAIDPESGVISTIRTLDR-------------------------EVQEAVELRVVARDLGE 635
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 636 PPLSATCLVSITVDDVNDNEPIFWRQVY 663
>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + YRI ++ KFS++ TG + L LDR+
Sbjct: 800 LYVKATDADEGENG-RVTYRI-QSGNTGGKFSLNPNTGSLSILKPLDRE----------- 846
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++I+ +T+ AED+G PQ S A + + V D+ND P F+ QY
Sbjct: 847 ---------------EQDIFNLTITAEDHGMPQQSSAQLLCVHVIDVNDEVPWFEETQY 890
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +NG + + + G + FSID+ +G EI +
Sbjct: 161 RVQAEDQDSGANG-QLSFDLYSPSGTQRSFSIDRSSG-----------------EIRLVG 202
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R ++ R D + VIA+D+G PQLS + + V+ ND+ P+FD + Y
Sbjct: 203 SLRYESTPRYD--------LQVIAKDSGVPQLSATFVLVVHVQAENDHGPVFDTLSY 251
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 26/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G I Y+I F +DK +G++ T LDR+ +R + +
Sbjct: 1019 GIINYKITVG-DSSGDFHLDKLSGVLSTSRPLDRE-------------VRARYM------ 1058
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A+D G P LS T++++V DIND+ P F+ Y
Sbjct: 1059 ------LTVTAQDQGHPPLSSTATVEVSVLDINDHSPQFESSAY 1096
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG I + F ID TG + T +DR EI+
Sbjct: 1423 IQVAAVDLDQGQNGQVIYSLRSSS--RSGLFKIDPLTGSITTAAIMDR-------EIWTE 1473
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
T + V A DR GTP+L+ + T+ + + D+NDN PM
Sbjct: 1474 TKLVVTATDR------------------GTPRLAGSATLTVIITDLNDNSPM 1507
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY-I 59
+ V ATD D NG I YR++ + + F ID G V ++ + R IY +
Sbjct: 1628 VTVTATDRDSGDNGKII-YRVMSS--TKGIFYIDPSNGNVLSIRKFCNVN-IRYLYIYCV 1683
Query: 60 TTDIRVQAL--------DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I L D ++P I + V A D G P LS T+ + V D+NDN P
Sbjct: 1684 LFFIHTGTLFTNQKTTFDAENPS----ILVVVEARDQGAPSLSTIATVHVHVTDVNDNAP 1739
Query: 112 MFDRVQY 118
+F + +Y
Sbjct: 1740 IFHQSEY 1746
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D+D NG + Y I F+I+ TG++ T ALDR+ +E Y
Sbjct: 905 LTVSASDLDLGPNG-QVTYSGIS----EEDFNINPVTGVITTTKALDRE----LREYYT- 954
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A+D G P T++I V D NDN P F R+ Y
Sbjct: 955 --------------------VTVYAKDGGLPPNYAKATVRIRVLDENDNTPYFGRLYY 992
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A D D NG + YR++ +R F I+ TG + T LDR
Sbjct: 376 HVSAADRDAGPNG-RLSYRLLHP--DR-HFQINPHTGEMSTKTVLDR------------- 418
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V+ +D G+P S T ITV D NDN+P F
Sbjct: 419 ------------EQQSSYQLVVLVQDGGSPPRSATGTAFITVLDDNDNDPAF 458
>gi|351709786|gb|EHB12705.1| Protocadherin-18 [Heterocephalus glaber]
Length = 1133
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E +TVIAED GTP LS + + DINDN P F R QY
Sbjct: 423 DRERRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSQY 469
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 198 IVVSELDR---ELQSSYELQLTASDMGVPQRSGSSLLKISISDSNDNSPAFEQQSY 250
>gi|218505779|ref|NP_001136237.1| protocadherin-15 isoform CD1-6 precursor [Homo sapiens]
Length = 1886
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETG----------IVKTLYALDR-- 48
+Q+ A D D SNG I Y I+ G + F I+K TG IV YAL
Sbjct: 529 IQLTAVDADEGSNG-EITYEILV--GAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQA 585
Query: 49 --DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ P E+ I T +ALDR+ +R YI +I +G P + T+ I V D+
Sbjct: 586 ADNAPPAERSTGILT--LGKALDRESTDR----YILIITASDGRPDGTSTATVNIVVTDV 639
Query: 107 NDNEPMFD 114
NDN P+FD
Sbjct: 640 NDNAPVFD 647
>gi|240975974|ref|XP_002402238.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491127|gb|EEC00768.1| conserved hypothetical protein [Ixodes scapularis]
Length = 278
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ ATD D N ++Y I P ++ F +D TG+V T +D
Sbjct: 170 LQLSATDRDE-GNNSLVRYSIRDTPDTYSQWFRVDARTGLVTTRTHID------------ 216
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D+G+P LS + T+ +T+ D+NDNEP+FD+ Y
Sbjct: 217 -------------CETSPVPRVTVVATDSGSPPLSASATVLVTISDVNDNEPIFDQSFY 262
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 74 EREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RE + +++ E D G P + T+ IT++D+NDN+P+F++ +Y
Sbjct: 4 DRENTPFYSLVIEAYDGGRPPFKGSMTVNITIQDVNDNQPIFNQSRY 50
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 31/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG + Y I + +R F+ID +TG++ LD +
Sbjct: 65 LRVFATDADSAENG-RVSYSINRRQSDRENMFAIDPDTGVISVNKPLDFE---------- 113
Query: 60 TTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K+++ + V+A D G L + +T D NDN P FDR Y
Sbjct: 114 ----------------AKDVHELVVVARDGGDQPLETTAFLAVT--DANDNAPQFDRDVY 155
>gi|193207741|ref|NP_506256.3| Protein FMI-1 [Caenorhabditis elegans]
gi|37048691|gb|AAQ84880.1| flamingo-like protein FMI-1 [Caenorhabditis elegans]
gi|169402906|emb|CAB01427.3| Protein FMI-1 [Caenorhabditis elegans]
Length = 2596
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 32/118 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V+A D D NG IIK E ++ F ID+++G++KT LDR+ R
Sbjct: 500 RVYAIDEDSGPNG------IIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYS----- 548
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L+ + T+ + ++DINDN P FD+ +Y
Sbjct: 549 --------------------LKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEY 586
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG I+Y + + G+ +I+ ++G+++T LDR
Sbjct: 290 LSVFARDLDSGENG-EIEYSLGEGNGKNL-LAINAKSGVIQTAAPLDR------------ 335
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + VIA D GTP+ ++ITV D+NDN P+F Y
Sbjct: 336 -------------ETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSY 380
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D NG + Y + ++ + F +D+ +G ++ LDR
Sbjct: 804 LQVSAIDADIGPNG-IVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDR---------- 852
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I + + A D GTP LS A + +T+ D+NDN P F+++ Y
Sbjct: 853 ---------------EQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSY 897
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 41 KTLYALD-----RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD 95
+ +Y++D R DP +I +++D LDR+D + V A D+ +P L+
Sbjct: 716 RIVYSIDSSQFFRIDPS-SGDISVSSD-----LDRED---RATFSVIVTASDHASPPLNT 766
Query: 96 ACTMKITVEDINDNEPMFDRVQY 118
+ +++ ++DINDN P F Y
Sbjct: 767 STQIEVILDDINDNSPQFTSSSY 789
>gi|355687670|gb|EHH26254.1| hypothetical protein EGK_16173, partial [Macaca mulatta]
Length = 1346
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T+ LDR E ++ + + V+A D G
Sbjct: 601 FAIDPESGVISTIRTLDR-------------------------EVQEAVELRVVARDLGE 635
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 636 PPLSATCLVSITVDDVNDNEPIFWRQVY 663
>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
Length = 3296
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D +NG + Y + APG + FSID +GIV T LD
Sbjct: 492 RVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIVTTAALLDY------------ 536
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P LS + T+ + ++D+NDNEP F R Y
Sbjct: 537 -------------ELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFY 581
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1667 LTLQATDPDLGANG-QVTYGGIS--GE--NFSLDPDTGVLTTLRALDR------------ 1709
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1710 -------------EEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTF 1749
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1124 RVFATDRDSGING-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1169
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1170 ------------ERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 1209
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1602 VRSLDR---EQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1652
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + ++V D+NDN P+F R Y
Sbjct: 2559 DFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAY 2605
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 427 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 475
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1770 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1813
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1814 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSY 1858
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2189 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2239
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2240 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2273
>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
Length = 3296
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D +NG + Y + APG + FSID +GIV T LD
Sbjct: 492 RVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIVTTAALLDY------------ 536
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P LS + T+ + ++D+NDNEP F R Y
Sbjct: 537 -------------ELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFY 581
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1667 LTLQATDPDLGANG-QVTYGGIS--GE--NFSLDPDTGVLTTLRALDR------------ 1709
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1710 -------------EEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTF 1749
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1124 RVFATDRDSGING-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1169
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1170 ------------ERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 1209
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1602 VRSLDR---EQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEY 1652
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + ++V D+NDN P+F R Y
Sbjct: 2559 DFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAY 2605
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 427 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 475
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1770 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1813
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1814 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSY 1858
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2189 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2239
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2240 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2273
>gi|443731666|gb|ELU16708.1| hypothetical protein CAPTEDRAFT_199171 [Capitella teleta]
Length = 1979
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSI---DKETGIVKTLYALDRDDPEREKEIYI 59
V +D N G IQYR++ E F I +++TGI+ ++DR
Sbjct: 1034 VRVVAIDYDKNSGDIQYRMVYDTDESLAFEITDLNRQTGIITLGRSIDR----------- 1082
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E + ITVIAEDNGTP L + + +ED+NDN P
Sbjct: 1083 --------------ELTSWVNITVIAEDNGTPALRSQAWVYVEIEDVNDNSP 1120
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 24/119 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ + ATD D P N + + I++ P E F+ID TG + LD +D
Sbjct: 693 LMIEATDADLPPNNA-LSFSIVEGDPFE--NFTIDSLTGSISVRSPLDYEDM-------- 741
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP + + + V+A D G P LS + I V+DIND +P F + Y
Sbjct: 742 ------------DPSMDGKFELKVLARDGGLPSLSSFTDVTIFVQDINDEQPFFQPLSY 788
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV D D + I YRI G + KF +D ETG + Y R D +R+K + T
Sbjct: 804 QVFCFDNDGTAPNNEIIYRI--ESGAQDKFRMDAETGQLTVEY---RADLDRDKFPHTYT 858
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TV+A D GTP + T++I++ D+N+ +P F
Sbjct: 859 -------------------LTVLAIDRGTPANTGTGTIEISISDVNNKDPEF 891
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 28/116 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPG--ERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A+D D NG +Q++ +++ G + F+ID+ G + T +DR+ ++E Y
Sbjct: 1359 QVIASDADEGING-RVQFQFVESLGNTDWKYFTIDRMAGNITTNAVIDRE----QQEFY- 1412
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ V A D G PQ D + I D +DN P FDR
Sbjct: 1413 --------------------FVEVKAYDLGKPQYDDRRIISIQALDEDDNPPEFDR 1448
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D SN I Y I G+ + F+ID +TG + +DR++ + ++
Sbjct: 350 LQITAIDGDR-SNPNPILYSFID--GDFSYFNIDAKTGWISIKTPIDRENSQIFAQL--- 403
Query: 61 TDIRVQALDRDDPEREKEIYITVIA-EDNGTP--QLSDACTMKITVEDINDNEPMFDRVQ 117
+ +TV+A ED +P Q S T+ I + D+ND PMF +
Sbjct: 404 ----------------GALKMTVMAQEDTASPHGQTSTKATVSIHILDVNDQIPMFAQSS 447
Query: 118 Y 118
Y
Sbjct: 448 Y 448
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ V A D+G P LS++ + +TVED+ND+ P+
Sbjct: 1304 VVVKATDHGFPVLSNSTILLVTVEDVNDHSPV 1335
>gi|449500407|ref|XP_002196414.2| PREDICTED: protocadherin-23 [Taeniopygia guttata]
Length = 3244
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 26/119 (21%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A+D D P S ++Y + A ID +G V T LDR
Sbjct: 474 LRLSASDADEPGSPNAEVRYALEGDAAALALLRIDARSGAVSTRARLDR----------- 522
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER+ + + V+A D G P + AC + + VED NDNEP F R Y
Sbjct: 523 --------------ERQAALELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFARAVY 567
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIV--KTLYALDRDDPEREKEIY 58
+ A D D + ++Y II E FS+ ET IV +T Y L
Sbjct: 2441 LLFSAIDCDWTHDNTFVEYSIIGGNAENL-FSV--ETSIVGSETSYKL------------ 2485
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + ALDR+ + + ++A D+GTP L+ T+ ITV D+NDN P+F +Y
Sbjct: 2486 VGSLVLSSALDRETAASHQ---LVLLASDHGTPSLNSTATVLITVLDVNDNPPVFSSSEY 2542
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D N +QY I+ PG KF ++ ++G + T +LDR
Sbjct: 1608 IRVEAVDRDAGLNS-LLQYEILPGPGYE-KFKMNSDSGELVTAASLDR------------ 1653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++ I V+ D+GTP LS T+ TV D ND+ P F
Sbjct: 1654 -------------ETQEVFNIKVLVWDSGTPSLSSTVTVICTVLDENDHSPTF 1693
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G + Y I+ E F +DK TG++ T LDR+ +E Y
Sbjct: 1502 VHHIIAKDPDEGRNGQVTYHILSG-NENKAFVLDKITGLLTTAQFLDRE----VQECY-- 1554
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TVIA D+G+P LS + I V D+ND P F + Y
Sbjct: 1555 -------------------SLTVIALDDGSPALSATQVLTIIVLDVNDETPRFLKQLY 1593
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG T +Y I+ E A F ID GI+ LD + T
Sbjct: 2132 VQVFATDLDSGLNGET-EYSIVSG-NENATFLIDSVRGILAANTGLDYE---------TT 2180
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ R + V A D G P+LS ++I V D+NDN P+
Sbjct: 2181 SSYR----------------LVVQAADKGNPRLSATAIVRIQVLDVNDNVPV 2216
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPG--ERAK-FSIDKETGIVKTLYALDRDDPEREKEI 57
+QV ATD D G I+Y + E++K F ID TG +I
Sbjct: 582 LQVKATDADA-DQFGEIEYSLYDGFNFYEKSKAFQIDPHTG-----------------QI 623
Query: 58 YITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+++ DI D E ++ Y + V A+D G LS ++I +EDINDN+P+F++
Sbjct: 624 FVSQDI--------DREEDQTTYDLLVKAKDGG--GLSGQAFVRIEIEDINDNQPVFEQ 672
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAP-GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A D+D N G ++Y+II GE F ++ +G + +LDR+D
Sbjct: 1714 VRAVDMDA-GNNGALRYKIIGGNIGEY--FILNNTSGKLLITRSLDREDI---------- 1760
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G+P S + + +TV D ND+ P+F + QY
Sbjct: 1761 ---------------SNFTLVIECHDLGSPSKSSSAQLYLTVLDENDHSPLFAKTQY 1802
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 27/105 (25%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
+PP++ + YRI KFS+D + GI++T LD
Sbjct: 801 EPPNSLEAVSYRICSG-DPHGKFSVDPQFGIIRTKKQLDH-------------------- 839
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + +TV ++ +P S + + I+V DINDN P+F
Sbjct: 840 -----EAQSVVVLTVQSQLGDSPIYS-STQVNISVTDINDNPPVF 878
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +I++TV+AE++ + S C + + ++D+NDN P F++ Y
Sbjct: 2074 DYEDKFKIHLTVVAENSFS---SVFCGVTVLIQDVNDNAPKFEQSYY 2117
>gi|444524494|gb|ELV13860.1| Protocadherin-16 [Tupaia chinensis]
Length = 725
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T LD
Sbjct: 465 VRVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPSSGIITTAALLDY----------- 510
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + +TV+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 511 --------------ELEPQPQLTVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 555
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
G + S G L+ALD E ITT +Q LDR E++ + V
Sbjct: 624 GPHGRLSYHILAGNSPPLFALDEHSGE------ITT---LQTLDR---EQQNSYQLLVQV 671
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMF 113
+D G+P S T+ I V D+NDN P F
Sbjct: 672 QDGGSPPRSTTGTVHIAVLDLNDNSPTF 699
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+GTP L + V D+NDN P FDR Y
Sbjct: 401 RLDREVRDAYNLRVTATDSGTPPLRAEAAFVLHVTDVNDNAPAFDRQLY 449
>gi|431903390|gb|ELK09342.1| Protocadherin-16 [Pteropus alecto]
Length = 2532
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SNG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 978 LTLQATDSDLGSNG-QVTYGGIS--GE--SFSLDPDTGVLTTLRALDR------------ 1020
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1021 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTF 1060
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 543 RVFATDRDTGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 588
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 589 ------------ERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 628
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 1870 DFESLTQYNLTVAAADRGQPPRSTAVPVTVTVLDVNDNPPVFTRTSY 1916
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 913 VRPLDR---EQRAEHILTVVASDHGSPPRSATQLLSVSVADVNDEAPAFQQQEY 963
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1081 LRASDPDVGANG-QLQYRIVDGDPSGA-FVLDLVSGEFGTMRPLDR-------------- 1124
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A+D G P LS + +TV D ND+ P F
Sbjct: 1125 -----------EVEPAFQLRIEAQDGGQPALSATLLVTVTVLDANDHAPAF 1164
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 1500 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 1550
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 1551 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 1584
>gi|348558978|ref|XP_003465293.1| PREDICTED: protocadherin-16-like [Cavia porcellus]
Length = 3297
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 492 VRVTARDPDQGTNG-QVTYSL--APGTHTRWFSIDPTSGIITTAASLDY----------- 537
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 538 --------------ELEPQPQVIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 582
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 30/117 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D TG++ TL ALDR
Sbjct: 1668 LTLRATDPDLGANG-QVTYGGIS--GE--NFSLDPNTGVLTTLRALDR------------ 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E ++EI +TV A D G+P L T+++ +ED ND+ P F Q
Sbjct: 1711 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPAFGNAQ 1754
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2190 LQVEADDLDQGS-GGQISYSLAASQLARGLFHVDPSTGTITTTAILDR-------EIWAE 2241
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2242 TRLVLMATDR------------------GSPSLVGSATLTVMVIDTNDNRP 2274
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1125 RVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1170
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1171 ------------EQQSSFQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTF 1210
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + +++ D+ND P F + +Y
Sbjct: 1603 VRPLDR---EQRAEHVLTVVASDHGSPPRSSTQLLTVSIVDVNDEAPTFQQQEY 1653
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F + Y
Sbjct: 2560 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASY 2606
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D ++G T+ LDR
Sbjct: 1771 LRASDPDVGANG-QLQYRIVDGDPSGA-FVLDLDSGEFGTMRPLDR-------------- 1814
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1815 -----------EVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAF 1854
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L + + D+NDN P FDR Y
Sbjct: 427 RQLDRE----ERDAYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPTFDRQLY 476
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GIV T LD
Sbjct: 491 VRVTARDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIVTTAALLDY----------- 536
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P LS + T+ + ++D+NDNEP F R Y
Sbjct: 537 --------------ELEPQPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFY 581
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y I GE FS+D +TG++ TL ALDR
Sbjct: 1571 LTLQATDPDLGTNG-QVTYGGIS--GE--NFSLDPDTGVLTTLRALDR------------ 1613
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ VED ND+ P F
Sbjct: 1614 -------------EEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAF 1653
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR E+ E +TV+A D+G+P S + ++V D+ND P F +++Y
Sbjct: 1506 VRSLDR---EQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQLEY 1556
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1124 RVFATDRDSGLNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1169
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER+ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1170 ------------ERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTF 1209
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + ++V D+NDN P+F R Y
Sbjct: 2463 DFESLTQYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAY 2509
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 427 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 475
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1674 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1717
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + A D G P LS + +TV D ND+ P F Y
Sbjct: 1718 -----------EVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSY 1762
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D PS G I Y + + R F +D TG + T LDR EI+
Sbjct: 2093 LQVEADDLDQGPS--GQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWA 2143
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2144 ETRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2177
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D +N + Y + P A+ F ID +TG++ T +D
Sbjct: 546 LQVLARDRDEGTNAA-LSYALADTPDTHAQWFQIDAQTGLITTRSHID------------ 592
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +T+IA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 593 -------------CETEPVPQLTIIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFY 638
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------E 54
+QV+A+D+D N I YRI+ A + A S+ G D D +
Sbjct: 1089 IQVNASDLDT-GNNARITYRIVDAGTDNASQSLASVGG-----GGSDADLAQHFGIFPNS 1142
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
IY+ ALDR+ +R + +TV+A DNGTP + + V D NDN+P F
Sbjct: 1143 GWIYLRA-----ALDRESRDRYE---LTVLATDNGTPAAHARARVLVRVLDANDNDPKFQ 1194
Query: 115 RVQY 118
R Y
Sbjct: 1195 RESY 1198
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 245 RLSSHRERDGVLYLDLQISGFLDR---ETTPAYSLLIEALDGGTPPLRGLMTVNITIQDV 301
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 302 NDNQPIFNQSRY 313
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +N ++Y I+ + A +GIV+T LDR+ +++Y
Sbjct: 2394 QVQAFDADEGANA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREI----RDVY--- 2445
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2446 ------------------SLKIIATDEGVPQMTGTSTIRVHIVDVNDNQPTF 2479
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D G P LS ++ + V+D+NDN P+F+R +Y
Sbjct: 1028 DYETAQRHSLIVTATDAGLPPLSADLSILVDVQDVNDNPPVFERDEY 1074
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG V LD + E +
Sbjct: 328 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDARTGAVYINKPLDFETKELHE---- 382
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D+G L + I V D+NDN+P + +
Sbjct: 383 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVI 418
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A D D N +I Y ++K FSID TG+++T LD + E+ IY
Sbjct: 1317 VRIRAIDRDHGQNA-SINYSLLKGRDSDGHGLFSIDANTGLIRTRVMLDHE----ERSIY 1371
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A D G P +++ V D+NDN P F
Sbjct: 1372 ---------------------RLAVAATDGGNPPKQTLRMLRVEVLDLNDNRPTF 1405
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++V+A D GTP L + ++ + V D+NDN P F++ Y
Sbjct: 485 DREATSNYTLSVVATDKGTPPLHASKSIFLRVTDVNDNAPEFEQDVY 531
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 34 DKETGIVKTLYALDRDDPEREKEIY----------ITTDIRVQALDRDDPEREKEIYITV 83
+ E+ ++ T+ A D D+ + +Y D R L +RE+ T+
Sbjct: 1903 NSESSVIHTVVASDLDEGANAEIVYSIIGGNLGNKFNIDARTGELSARSLDREQHARYTL 1962
Query: 84 I--AEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
A D G P C + + VED NDNEP F+ +Y
Sbjct: 1963 QLQASDRGQPITQQGHCNISVFVEDQNDNEPRFELSKY 2000
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D N I YRII G ++F+I+ TG + T LDR
Sbjct: 2331 LLVNASDADASKNA-VISYRII---GGNSQFTINPSTGQIITSALLDR------------ 2374
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2375 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2420
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3477 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3523
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3524 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3559
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3375 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3420
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3421 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3459
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2267 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2316
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2017 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2061
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2062 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2106
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2121 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2166
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2167 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2211
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2637 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2682
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2683 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2725
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3060 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3110
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3111 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3143
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+D
Sbjct: 603 LVLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRED---------- 651
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
QA + V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 652 -----QAF----------YSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ +T+ A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLTITATDSGSPALTGTGTINVIVDDVNDNVPTFASKSY 2369
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPTYSLVIEAVDSGTISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGKITVTAELDR-------------- 3470
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3471 -----------ETLPVYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 ITLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G +KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLG--SKFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPPLSSSAEVVVMVLDINDNNPIFAQALY 2159
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADTSTNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLLVVCSDAGFPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYLLTVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPY 2264
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FTINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKISHYVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFTFTVIATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TG++ ALD + ++ +
Sbjct: 3111 VSARDRDTAMNG-LIKYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISATDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F +++Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKY 2988
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 25/87 (28%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
KF +D +TG + +L D + +ITV A+D
Sbjct: 3030 GKFKLDNDTGWISVASSLISD-------------------------LNQNFFITVTAKDK 3064
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDR 115
G P LS T++ITV + N + P F +
Sbjct: 3065 GNPPLSSQATVQITVTEENYHTPEFSQ 3091
>gi|403254095|ref|XP_003919814.1| PREDICTED: protocadherin-16 [Saimiri boliviensis boliviensis]
Length = 3297
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 492 VRVTARDPDQGTNG-QVTYSL--APGAHSHWFSIDPTSGIITTAVSLDY----------- 537
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 538 --------------ELEPQPQLIVVATDGGLPSLASSATVSVALQDVNDNEPQFQRTFY 582
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++KTL ALDR
Sbjct: 1668 LTLRATDPDLGANG-----QVTYGGVSSESFSLDPDTGVLKTLRALDR------------ 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1711 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1750
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TGI+ T LDR EI+
Sbjct: 2190 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGIITTTAILDR-------EIWAE 2241
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2242 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2274
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR ER E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1603 VRPLDR---ERRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1653
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1125 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1170
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1171 ------------EQQSSYQLLVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTF 1210
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 428 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 476
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALTGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++ V Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETGI+ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGIITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+D
Sbjct: 603 LVLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRED---------- 651
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
QA + V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 652 -----QAF----------YSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIEAVDSGTVSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDTGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSILSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQALY 2159
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F +D TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRLDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ IT+ DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSITLLDINDFVPIFELSPY 2264
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFTFTVIATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TG++ ALD + ++ +
Sbjct: 3111 VSARDRDTAMNG-LIKYSI-SSGNEEGIFAINSSTGVLTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISATDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F +++Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKIKY 2988
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ +ITV A+D G P LS T++ITV + N + P F +
Sbjct: 3053 QNFFITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQ 3091
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFTINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y I+K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIVKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++ V Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2321 SLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALY 2159
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R++ + TV+A D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRQRGTAVFSFTVVATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|297293548|ref|XP_002804273.1| PREDICTED: protocadherin-23-like [Macaca mulatta]
Length = 3366
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G++ T+ LDR E ++ + + V+A D G
Sbjct: 601 FAIDPESGVISTIRTLDR-------------------------EVQEAVELRVVARDLGE 635
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 636 PPLSATCLVSITVDDVNDNEPIFWRQVY 663
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD
Sbjct: 2257 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY------------ 2302
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A D G P+LS+ +K+ V DINDN P F
Sbjct: 2303 -------------EHTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF 2342
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G I Y I+ E F +D+ +G++ T LD
Sbjct: 1633 VHHIIAHDPDEGRNGKITYSILSG-NENMAFMLDESSGLLTTTCPLDY------------ 1679
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + V+A D+GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1680 -------------EMKTQHILIVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLY 1724
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2613 VLLHSLDRETSANHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2665
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID ++G+V LD ER K+
Sbjct: 3355 YYTIVGGNEHKKFEIDTKSGVVSIAEQLDY-------------------------ERAKD 3389
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P L++ T+ ITV D NDN PMF + Y
Sbjct: 3390 YFLTIQAIDGGVPPLTNHATVNITVLDSNDNAPMFSQASY 3429
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y I + G+R K F+ID ++G + L LDR
Sbjct: 3444 VQVFANDLDSNENG-QVSYSIER--GDRQKQFTIDSQSGQITVLAPLDR----------- 3489
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + V A+DNG P LS+ + I V D NDN P+F + Y
Sbjct: 3490 --------------EQIASYVLEVHAKDNGIPTLSNYVIVNIEVIDANDNPPLFAQNNY 3534
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R G+ KFS+DKETG++KT+ LDR+ + YI
Sbjct: 3131 LTVLATDYDDEPNA---KLRFYLTGGKNEKFSLDKETGVLKTVGQLDRESQAK----YIL 3183
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T DRD E + ++I + D+NDN P F Y
Sbjct: 3184 T---AHVQDRDKTSWEC------------------SSQLEILISDLNDNAPRFSMQSY 3220
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y + + + F I ++GIV LDR+ K +Y
Sbjct: 3236 KVHATDDDIGINR-KIRYEFLDSANDH--FVISPDSGIVTLAKPLDRE----TKAMY--- 3285
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +QA+D+ GTPQLS + + V+DINDN P F Y
Sbjct: 3286 NVSIQAMDQ------------------GTPQLSSVTFLIVNVQDINDNPPEFTSKYY 3324
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ + R D ERE E ++ + D G PQ S + + ++V D+NDN P F++
Sbjct: 853 LRLIGRLDREREDEYFLNITVYDLGKPQKSASRMLAVSVLDVNDNAPKFEK 903
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV+A D G P LS + +TV D+NDN P F++ Y
Sbjct: 2446 DHETADSHHFTVVAMDRGVPSLSSTAHVWLTVIDMNDNPPKFEQSSY 2492
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG ++Y GE A F+ID TG + +L LD+
Sbjct: 2921 LKVVAHDNDLGSNG-EVRYSFGSDIGELANVFTIDAYTGWISSLVQLDK----------- 2968
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E++ E VIA DNG P+ ++ + ++D NDN F +
Sbjct: 2969 --------------EQQPEYKFQVIATDNGNPRHFSRTSVLVKLKDYNDNPSAFSSAE 3012
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D GG I+Y + F IDK +G +++L LD + E++++
Sbjct: 1037 IEATDPDE-GPGGIIEYSFSEEMESEGFFGIDKLSGTIRSLQKLDFE----ERQVHT--- 1088
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN--EPMFD 114
+T++A+D G P LS + I V D+N+N P+F+
Sbjct: 1089 ------------------LTIVAKDKGEPSLSSETILIIEVVDVNENLHAPVFN 1124
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + TD D N + Y ++ + + F +D+ TG++ LDR ER+ +
Sbjct: 921 FRANTTDADLGENA-QVAYSLVT---DTSDFRVDRTTGVLTVFGKLDR---ERQS----S 969
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D++ + E D P L ++++V+D+NDN P F Y
Sbjct: 970 YELRIRATDKNGGNDKGE-------PDFDNPALYSEALVRVSVDDVNDNAPKFALTSY 1020
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D DPP I Y I G FSID E I R K +
Sbjct: 1144 QVKAKDADPPGGDSRIGYSIRGGDG-VGLFSIDDEGNI-------------RTKAVL--- 1186
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ++TV A+D+G LS + + V D NDN P+ ++ Y
Sbjct: 1187 ----------DVEAKAGYWLTVYAQDHGVVPLSSKLQVYVEVLDENDNTPLTEQPVY 1233
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 41 KTLYALDRDDPEREKEIY----ITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSD 95
K Y+L + +I+ +T I + +ALDR E +E +TV+ +D GTP +
Sbjct: 1571 KLFYSLHNAQSQASLQIFHVDSLTGTITLNEALDR---ETIQEHILTVMVKDQGTPAKRN 1627
Query: 96 ACTMKITVEDINDNEPMF 113
+ +TV D ND+ P F
Sbjct: 1628 FARVLVTVHDHNDHAPTF 1645
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 27/93 (29%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG ++T+ LD E E V D
Sbjct: 1904 RKFFHIDSSTGAIRTVMLLDH-------------------------ETIPEFQFNVKVSD 1938
Query: 88 NGTPQLSDACTMK--ITVEDINDNEPMFDRVQY 118
G P+LS T K ITV D+ND P F + Y
Sbjct: 1939 LGKPKLSSESTAKVIITVSDVNDCPPKFQQSDY 1971
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASKNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G+ F I+ TG + L ALDR
Sbjct: 2340 ITVRAYDADTPPFNS---QVRYFLKEGDTDFFKINASTGEISLLRALDR----------- 2385
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++E +T++A D G+P L+ T+++ V+DIND+ P F+R Y
Sbjct: 2386 --------------EMQEEYILTLVAMDTGSPPLTGTGTVRVMVQDINDHNPEFERQSY 2430
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 30/111 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
M + ATD D P NG Y+++ G R K F++++ +G++KT+ +LDR
Sbjct: 3609 MTLAATDPDLPPNGAPFTYQLV---GGRHKSLFTLERHSGVLKTVRSLDR---------- 3655
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ ++ + V+ EDNG P+ T+ + V D ND+
Sbjct: 3656 ---------------EQTPQLELLVVVEDNGKPRKRTQHTITVNVLDQNDS 3691
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1918 RLDYEEVQHYILVVQAQDNGYPSLSSTLTVYCNVVDLNDNAPIFDPMSY 1966
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D NG I YR+ + F I+ +TG EIY TT
Sbjct: 2766 KVSASDADSEENG-QITYRLRD---DFESFEINTDTG-----------------EIYTTT 2804
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
LDR+D + I V A D G PQL+ + T+ + V D NDN P F R+
Sbjct: 2805 R-----LDREDIAQYTLI---VEAVDQGVPQLTGSATVLVNVLDKNDNPPKFTRL 2851
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A DNG P + C + I V D N+N P+F + Y
Sbjct: 3022 ENSFTLTVLATDNGKPPMYTECLVNINVVDANNNPPVFSQRAY 3064
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
E+ YI +RV LDR++ + +TV+A D G P + + I V D+ND+E
Sbjct: 391 EKSPSFYI---VRVNGVLDREEIGKYN---LTVVAIDRGAPPRTATAHLIIHVNDVNDHE 444
Query: 111 PMFDRVQY 118
P+F++ +Y
Sbjct: 445 PVFEKSEY 452
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 22/88 (25%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID G ++T + DR +AL + + + DNG
Sbjct: 1155 FSIDSRNGFIRTRRSFDR-----------------EALGG-----QSFLALEATVSDNGA 1192
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
+L D +K+ + D+NDN P+F R Y
Sbjct: 1193 VRLRDRVKIKVFITDVNDNAPVFVRAPY 1220
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ALDR E + VIA D+G+P S + T+ + VED NDN P
Sbjct: 616 RALDR---ELVAAYTLVVIARDHGSPPQSSSATVSVAVEDANDNSP 658
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 35/120 (29%)
Query: 3 VHATDVDPPSN-GGTIQYRIIK-----APGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
V T DP S G ++Y I GER F I+ TG++ TL+ +DR
Sbjct: 1446 VTVTAEDPDSGLNGKVRYEIAHQDPQDGDGER-HFGINPTTGVIHTLHLIDR-------- 1496
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMF 113
+A+D +TV+A D P +LS + + VED+NDN P+F
Sbjct: 1497 ---------EAID--------TYRLTVLATDQAAPPAQRLSAEKLVTVIVEDVNDNAPVF 1539
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 34/119 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D +NG +++ I R F+I +++G+V+ L+
Sbjct: 2228 LQVSATDIDEGANG-RVRFSIAAGDDNR-DFTISEDSGVVRVAKNLNF------------ 2273
Query: 61 TDIRVQALDRDDPEREKEIYITVIAED------NGTPQLSDACTMKITVEDINDNEPMF 113
ER+ ITV AED NG + D + IT+ DINDN P F
Sbjct: 2274 -------------ERKSLYAITVRAEDCAGDTENGEVRF-DTARLSITITDINDNPPTF 2318
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T YRI++ E KF + T +Y L
Sbjct: 132 ATDRDAGENGVTDDYRIVEGNHEE-KFRLAVTTSPNGDVYYL-----------------H 173
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + D E + + A D G P + +T+ D+NDN P+FD Y
Sbjct: 174 LETTGKLDRESRGFYALNISARDGGEPARYGYLRVNVTILDVNDNPPIFDHSDY 227
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR E + + VIA+D G P ++I V D NDN P+FD QY
Sbjct: 2160 LRVSGQLDR---EAKPSYELNVIAKDRGDPPRMTQSRIRINVLDENDNSPIFDPKQY 2213
>gi|327269525|ref|XP_003219544.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2539
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y ++ G FSID ++G++ T + DR
Sbjct: 464 LRVEAYDADLGQNG-EVKYSLMHRDGSLPGFSIDPDSGVITTTRSFDR------------ 510
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E ++VIA D L C + I + D NDN+P F+ +Y
Sbjct: 511 -------------EKQREYMLSVIATDQAQEPLIGMCQITIYIADENDNDPKFENSRY 555
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
MQV ATD D NG + Y I+K + G+ F+ID +G++ TL + DR+ ++ Y+
Sbjct: 782 MQVLATDADSGLNG-EVHYSILKDSSGDYQYFTIDSTSGVISTLASFDRE----KRASYL 836
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R IY G P +D ++I + D+NDN P F + Y
Sbjct: 837 ---IEVQSQDSSESARPG-IY--------GQPN-TDTAYVRIFISDVNDNCPAFPHLVY 882
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 46 LDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
L++ DP + D V D E + + VIA D G P LS + T+ + ++D
Sbjct: 1349 LNKSDPS--GRFSVANDGWVIVAGELDYETVAQYQLVVIATDMGQPALSSSATVLVALQD 1406
Query: 106 INDNEPMFD 114
+NDN P FD
Sbjct: 1407 VNDNGPEFD 1415
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D + G Y + G +++FSI++ TG
Sbjct: 1000 LQVSATDPDQETKQGGFCYSL-HGQGAQSEFSINELTG---------------------- 1036
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ A +R D E+ V+A D L+ + I V D+NDN P+F
Sbjct: 1037 ---EITANERLDREKRSMWRFLVLATDEDGEGLTGFADVIIEVLDVNDNAPLF 1086
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D N + YR++ +P + F I TG V +LDR
Sbjct: 990 LRVTAADSDS-GNNARLTYRLVDSPAASSTFGIYPNTGYVYLRESLDR------------ 1036
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E E I V A DNG P LS + T+ I V D NDNEP F R
Sbjct: 1037 -------------ETEDSYTIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVR 1078
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A D G+P LS + +TV D+NDNEP+FD+ Y
Sbjct: 525 LTVVARDKGSPSLSSTAKLTVTVSDVNDNEPLFDQSYY 562
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 34 DKETGIVKTLYALDRDDPEREKEIY---------------ITTDIRVQALDRDDPEREKE 78
++E + L+A D D E + +Y ++ ++ +ALDR E E
Sbjct: 1726 NREWSFIHRLHAADDDLGENGEIVYSIEEGNVGNVFSIAPLSGNLSCKALDR---ESASE 1782
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A+D G P C + ITV D NDN+P F+ +Y
Sbjct: 1783 YSLVVLAQDRGAPPKIGRCRLWITVMDQNDNDPQFEHSEY 1822
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A D+D +NG + Y +I A + FSID ETG + T DR++ R
Sbjct: 1837 LMVNAHDIDEKNNG-EVTYSLINA--TNSLFSIDSETGRIYTTGQFDRENEPRYT----- 1888
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A DR E S + T+ I + D NDN+P+F R +
Sbjct: 1889 --LEVRASDRGSYETR-----------------SHSATVHIAITDANDNKPIFVRYPF 1927
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA D D NG I Y + + E F +++ +G + +LD
Sbjct: 889 VHAQDADSGENG-RISYSLAE---ESENFKVNERSGAIILKRSLDY-------------- 930
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ +TVIAED TP + T+ + V+DINDN P+F+ Y
Sbjct: 931 -----------ELRQQHRLTVIAEDGATPARRNNMTLLVEVQDINDNTPVFEYESY 975
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
ER++ +Y+ D++V LDR E + + A D GTP L + IT++D+NDN+
Sbjct: 177 ERDEVLYL--DLQVNGILDR---EITPNFSLVIEAYDGGTPPLKGVLLVNITIQDVNDNQ 231
Query: 111 PMFDRVQY 118
P+F + Y
Sbjct: 232 PIFSQGNY 239
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ +T++A D G P L + + + D+NDN P F + +Y
Sbjct: 412 DRERQANFTMTIMATDQGIPPLKTSKQFTLHISDVNDNAPRFTQSEY 458
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 27/96 (28%)
Query: 19 YRIIKAPGERAKFSIDK-ETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77
++II + A F+ID +GI+KT LDR+ RE + I T
Sbjct: 2171 FQIIDGNHDNA-FTIDPPSSGIIKTNTVLDREI--RENYVLIVT---------------- 2211
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D +P LS T+ IT+ DINDN+P+F
Sbjct: 2212 -------ASDEMSPPLSGTTTVLITIVDINDNQPVF 2240
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I + +R + F+ID ++G EI++
Sbjct: 254 LRVLATDTDEGRNG-EVRYSINRRQSDREQYFNIDPKSG-----------------EIFV 295
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ LD + E + + V+A DNG L + I + DINDN P
Sbjct: 296 N-----KPLDFETKESHE---LVVVARDNGLQPLETTTFVSIKISDINDNTP 339
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P ++Y + + + F I+ TG + L LDR
Sbjct: 2255 LTVKAYDADTPPLNSQVRYFLKEGNATKDLFRINASTGEIVLLTPLDR------------ 2302
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P LS+ +K+ V+DINDN P+F+ +QY
Sbjct: 2303 -------------EQQSEYILTLVAMDTGSPPLSNTGIVKVEVQDINDNGPVFE-LQY 2346
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD----PEREKEIYITVIAE 86
F ID G +KTL DR+ R TD ++L DD + I I +
Sbjct: 1027 FKIDMHNGFIKTLRPFDREALVRSTR---GTD-NSESLSDDDRNISSGGDNYILIEAVVT 1082
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P LSD +K+ V D+NDN P F R Y
Sbjct: 1083 DNGNPPLSDKVKVKVIVTDVNDNAPEFLRAPY 1114
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 76 EKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + YI ++ A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1834 EVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNTPLFDPMSY 1877
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+ ++A D G P LS ++ + + D+ND+ P+FD Y
Sbjct: 838 EPETVFYVEIMATDGGNPPLSSRLSLPVHIADVNDHTPVFDHTSY 882
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP+ + I V D+ND+EP+F++ +Y
Sbjct: 330 VRVNGVLDREEISKYN---LTVVATDKGTPERKSIAHLIINVNDVNDHEPVFEKSEY 383
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D I Y + ++P FS+D TG EI+ T
Sbjct: 2885 QVIATDRDKRGPNSVISYSL-QSPS--PIFSVDPATG-----------------EIFTKT 2924
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ + + E +T++A DNG P L C + I + D N+N P F + +Y
Sbjct: 2925 QIQYKH-SQYISSPENMFSLTILATDNGKPPLYTECLVNINIVDANNNPPKFAQAEY 2980
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ + F+++K TG + + LD D
Sbjct: 3101 LTVSATDKDNGPNG-MLHYNIVDG-NDSENFNVNKHTGAITIMQPLDYD----------- 3147
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +E ++ + D G LS + I + D+NDN P+F++ +Y
Sbjct: 3148 --------------QMQEYHLNISVTDLGYKPLSAVAMVTIILTDVNDNPPLFNQSEY 3191
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D P NG Y+I+ ++ ++DK TG+VK+ + DR+ + I
Sbjct: 3523 MTLTATDPDLPENGPPFSYKIVGG-RHKSWLTVDKYTGLVKSTSSFDRETTPLLEAIIEV 3581
Query: 61 TD-----------IRVQALDR-DDPEREKEIYITV 83
D + ++ LD+ D+P + +++ V
Sbjct: 3582 EDSGVPKQQAQHKVSIKVLDKNDNPSTARSVHVAV 3616
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T Y II ++D + +V T +P + T+ +
Sbjct: 58 ATDADIGDNGVTDHYEIIAG-------NVDNKFRLVTT------TNPSGD-----TSYLH 99
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D GTP + +T+ D+NDN P+FD Y
Sbjct: 100 LETTGNLDRESRGSYQLNISASDGGTPPRLGFLQVNVTILDVNDNPPIFDHSDY 153
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 33/114 (28%)
Query: 8 VDPPSNG--GTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
D P +G G + Y I K E + F I+ +TG++ TL +DR
Sbjct: 1344 ADDPDSGLNGKVTYVITKQEPEMSGGRHFGINTQTGVIYTLREIDR-------------- 1389
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMF 113
E +TV+A D P QLS + + VEDINDN P+F
Sbjct: 1390 -----------ESIDNFRLTVVATDQAQPSERQLSTEKLVTVIVEDINDNAPIF 1432
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N T Y II + F ID E+G + T LDR+D
Sbjct: 3425 DVRPQNNHFT--YSIING-NLKQSFKIDAESGEITTAALLDREDIAHYN----------- 3470
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A D G P + T++I ++DINDN P F
Sbjct: 3471 --------------LVIGAIDTGLPPQTGTATVRINLDDINDNGPTF 3503
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V D D NG Y + A E FS+D TG++ + LDR+ E + + +
Sbjct: 1129 MHVFTQDADEGLNGDV--YYSLAAGNEANLFSLDSATGLLTLAHRLDRESQEIHRLVVVA 1186
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
D A ++ + I ITV+ +++ P+ + + +
Sbjct: 1187 KD----AALKNPLKSTANITITVLDDNDNAPEFTQSSS 1220
>gi|432107356|gb|ELK32760.1| Protocadherin-11 X-linked [Myotis davidii]
Length = 821
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N AP E F++D+ TGI+ + LDR
Sbjct: 290 KISATDADTGRNAEITYLLGDDAPSE---FNLDQRTGILTAMKKLDR------------- 333
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 334 ------------EKQEKYYFTVLAKDNGIPPLITNVTVLVTVLDQNDNSPIFTHNEY 378
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++I++ DINDN P+F
Sbjct: 10 LDRE----EKDTYVMKVKVEDGGFPQKSSTAILQISIADINDNHPVF 52
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R + ++ + ++ D E KE I ++A D G P L+ + + I ++D
Sbjct: 204 DHDVPFRLRPVF-SNQFLLETAAFLDYESTKEYAIKLLAADAGKPPLNQSSMLLIKIKDE 262
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 263 NDNAPVF 269
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +N +QY I+ + A F ID++ GI+ T +DR E+ +
Sbjct: 1491 IQVSATDADSGTNS-EVQYSIVSGNHDNA-FVIDRDRGIISTNVRMDR-------EVRDS 1541
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++A+D+ GTP+L+ + T++I+V DINDN P F
Sbjct: 1542 YRLELRAVDK------------------GTPRLTGSATLRISVVDINDNRPTF 1576
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKIT 102
+ ++ +P + Y+ I QA+DR+ E +Y + V+A D GTP+ + T+ +
Sbjct: 1831 FQIETIEPSPNSDQYMGKIILFQAIDRE----EVPMYTLRVLASDRGTPERNSTVTVYVL 1886
Query: 103 VEDINDNEPMFDRVQY 118
V+D+ND+ P+F+ QY
Sbjct: 1887 VDDVNDHSPIFNSTQY 1902
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D +NG + Y I + E +F+I+++TG+++T + LDR+ EK+ YI
Sbjct: 963 IQITALDADAGTNG-VLTYNIPRGVAED-RFTIEEQTGVIRTAFRLDRE----EKDSYI- 1015
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T A D P ++ ++V D ND+ P+F +Y
Sbjct: 1016 --------------------VTAYARDGAYPSRFGFTSVVVSVLDTNDHAPVFKDAEY 1053
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D SNG ++Y ++ + FS++ +G VK L ++D DD
Sbjct: 223 AQDQDAGSNG-LVRYSLLN--NQDNLFSVNSISGEVKILRSVDADD-------------- 265
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+P R + + ++A D GTPQ T+ + ++D NDN PMF Y
Sbjct: 266 ------DNPLRYE---LKIMAHDQGTPQRFSNLTLLVIIQDENDNGPMFSPTFY 310
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 30/110 (27%)
Query: 9 DPPSNG--GTIQYRIIKA-PGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
D P NG GTI YR++ + PG + F+I ++G++ T LDR+ +K Y+ +
Sbjct: 540 DDPDNGENGTITYRLVTSTPGMNGEEMFNIHSQSGLITTNAPLDRE----QKPTYV---L 592
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V A+D P RE+ ++ I V D NDN P+F
Sbjct: 593 SVAAVDGGTPPRERTTFV------------------HIHVTDSNDNAPVF 624
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D NG + Y+I+ + KF +D TG L A++R
Sbjct: 858 MYVIAVDDDFGDNG-RVTYQIVSG-NQGGKFLLDPNTG----LLAIER------------ 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R D E E + + A D+GTP S + + I V D+NDN+P F
Sbjct: 900 ---------RLDRETESRYVLNITATDHGTPSRSASHLITIHVRDVNDNQPRF 943
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 29/112 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATDVD NG ++YRI+ F ID TG ++T +DR
Sbjct: 754 ATDVDSGRNGA-VRYRIMDQLPNGNNFRIDSVTGALQTTTPIDR---------------- 796
Query: 65 VQALDRDDPEREKEIYITVIAED---NGTPQLSDACTMKITVEDINDNEPMF 113
E+ + + V A D N + + T +I VED+NDN P+F
Sbjct: 797 ---------EQTSQFTLVVEATDQPVNLSHARTKTTTARILVEDVNDNTPVF 839
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E ++ V+A DNG+P + +++TV D NDN+P F + Y
Sbjct: 366 RLDRELRDSYFLQVVARDNGSPPRNATANVRVTVTDDNDNDPRFTQESY 414
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D SN I Y + AP E F +D G + T K I I
Sbjct: 1699 VTATDRDAGSNA-EITYSMTVAPVE--GFYVDPRNGTIFT-----------NKTIEIN-- 1742
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+Q+ I + + A D+G P L+ ++I V DIN++ P F QY
Sbjct: 1743 -RMQS----------TIQLVIEARDHGVPSLASVVAVRIQVNDINNHAPQFTAGQY 1787
>gi|194740996|ref|XP_001952975.1| GF17449 [Drosophila ananassae]
gi|190626034|gb|EDV41558.1| GF17449 [Drosophila ananassae]
Length = 859
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 1 MQVHATDVDPPSNG---GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+Q+ A D D NG + Y I++ RA FSID ++G+++ L+ D +D
Sbjct: 636 LQLEARDAD--LNGTENSQVTYEIVEG-MYRANFSIDPQSGLLRPLHRFDFED------- 685
Query: 58 YITTDIRVQALDRDD--PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ R +A+ + +EI + V A D+G P LS + I V+D+NDN P+F R
Sbjct: 686 LVERSSRREAISQAGGISSSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNPPIFQR 745
Query: 116 VQY 118
Y
Sbjct: 746 SFY 748
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNTQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D GTP S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGTPPQSSMTRINVSLLDINDNSPVFYPVQY 694
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLD------------- 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 957 ----VQA---------GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDITSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSL-STVGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQTLY 2159
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +++ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VVRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E +++ + + A D G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDR---ETKEQFVLMITAIDGGSPALTGTGTISVIVDDVNDNVPTFASKAY 2369
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSYYVLTIKSSDKGSPSQSASVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 68 LDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
DR+ R + + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1161 FDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 25/87 (28%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
KF +D +TG + +L D L+R+ YITV A+D
Sbjct: 3030 GKFKLDNDTGWISVASSLISD------------------LNRN-------FYITVTAKDK 3064
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDR 115
G P LS T++ITV + N + P F +
Sbjct: 3065 GNPPLSSQTTVEITVTEENYHTPEFSQ 3091
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|119514241|gb|ABL75904.1| protocadherin 2G29 [Takifugu rubripes]
Length = 944
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 32 SIDKETGIVKTLYALDRDDPEREK--------------EIYITTDIRVQAL-DRD-DPER 75
S+ +++G+ L + +DP+ E EI T++ L +R+ D ER
Sbjct: 349 SVPEDSGLKTVLALMSVNDPDSENNGKVQCMINENIPFEIKFTSNNVYSLLTERELDRER 408
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 409 ESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 451
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E+++ I + + AED G PQ++ + + V D+NDN P+F + Y
Sbjct: 195 LDR---EKQEHISLLLTAEDGGEPQMTGTMRIYVAVLDVNDNAPVFTKPVY 242
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 508 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 554
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+VK +LDR E + E Y+
Sbjct: 842 IQVEATDKDLGPNG-HVTYSILT---DTDTFSIDSVTGVVKIARSLDR---ELQHEHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQLS +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLSSTVVVKVSLEDVNDNPPTF 927
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E Y+TV A D GTP LSD ++ I V DINDN P+F + Y
Sbjct: 3201 DYESSHEYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTY 3247
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3262 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTRLLDR------------ 3307
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3308 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3352
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N G I Y++ + + F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMFENHSKSHDHFHVDSSTGLISLLRTLDY----------- 2350
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ I V A D G P LS + + V D+NDN P+F++ Y
Sbjct: 2351 --------------EQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY 2395
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDAGRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + I E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAISGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + +TV D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVTVVDANDNPPEFLQESY 827
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVI 1232
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1233 VKILDENDNKPQF 1245
>gi|395526460|ref|XP_003765381.1| PREDICTED: protocadherin-16 [Sarcophilus harrisii]
Length = 3095
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D NG + Y I+ PG A F+ID TG++ T LD
Sbjct: 280 RVTARDPDQGPNG-NVAYSIV--PGTHAHWFAIDASTGVITTAAPLDY------------ 324
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS + + ++D+NDNEP+F R Y
Sbjct: 325 -------------ELEPRPQLTVLATDGGQPALSSTAVVHVVLQDVNDNEPVFKRTFY 369
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +HATD D NG + Y + FS+D TG++ T LDR
Sbjct: 1459 LTLHATDPDLGVNG-QVTYGGVSGD----TFSLDPNTGVLTTRQVLDR------------ 1501
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P L ++ +TVED ND+ P F
Sbjct: 1502 -------------EEQQEINLTVYAQDGGSPPLLSHVSVHVTVEDENDHAPAF 1541
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D NG + Y +++ P E F I +TG V T +LDR
Sbjct: 917 RITATDRDSGPNG-HLTYHLLQPPDESGAFHIHPQTGEVTTRRSLDR------------- 962
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G P S T+ + V D+NDN P F
Sbjct: 963 ------------EQQSSYQLLVQVQDGGAPPRSTTGTVHVMVLDLNDNSPTF 1002
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D+D GG + Y + + R F ID G + T LDR EI+
Sbjct: 1984 LKVEADDLDQ-GPGGQVTYSLAPSHATRGLFHIDPAMGTITTTAILDR-------EIWAE 2035
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A DR G+P L + T+ + V D NDN P
Sbjct: 2036 TRLVVMATDR------------------GSPPLVGSATLTVLVIDANDNRP 2068
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A D GTP L + + V D+NDN P FDR+ Y
Sbjct: 215 RLDREEQDAYELRVTATDAGTPPLRAEAALVLLVTDVNDNAPAFDRLLY 263
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E +TV A D G P S + + ITV+D+NDN P+F + Y
Sbjct: 2349 DFESVTEYNLTVCAADRGKPPRSTSVLVVITVQDVNDNPPVFAQPHY 2395
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TV+A D+G+P S + ++V D+ND P F + Y
Sbjct: 1398 DREQRAEHLLTVVAADHGSPPRSATQLLTVSVVDVNDEAPTFPQAAY 1444
>gi|402588837|gb|EJW82770.1| hypothetical protein WUBG_06321, partial [Wuchereria bancrofti]
Length = 777
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 25/101 (24%)
Query: 14 GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
G I Y++ F ID+ TGI+ T+ LDR+ EKE YI
Sbjct: 501 NGRITYKLDGEDSANETFQIDQTTGIITTISKLDRE----EKEKYI-------------- 542
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V AED G P LSD+ + I V DINDN P F+
Sbjct: 543 -------LKVKAEDGGEPPLSDSLLITIIVRDINDNAPYFE 576
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
Y+L +D + +I+ +T + +Q D E I I V A D G P ++ ++I +
Sbjct: 298 YSLGEEDGAKLLQIHSSTGV-IQTAHHLDRELMNIIRIYVYATDKGVPPMTSRALLEINL 356
Query: 104 EDINDNEPMFDR 115
D+NDN P+F++
Sbjct: 357 LDVNDNAPVFEQ 368
>gi|218505722|ref|NP_001136209.1| protocadherin-15 isoform CD1-6 precursor [Mus musculus]
Length = 1867
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETG----------IVKTLYAL---- 46
+Q+ A D D SNG I Y I+ G + F I+K TG IV YAL
Sbjct: 529 IQLTAVDADEGSNG-EISYEILV--GGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQA 585
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ P E+ I + +ALDR+ +R YI ++ +G P + T+ I V D+
Sbjct: 586 SDNAPPAERSTGILS--LGKALDRESTDR----YILIVTASDGRPDGTSTATVNIVVTDV 639
Query: 107 NDNEPMFD 114
NDN P+FD
Sbjct: 640 NDNAPVFD 647
>gi|85725291|gb|ABC79263.1| protocadherin-15-CD1 isoform 6 [Mus musculus]
Length = 1867
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETG----------IVKTLYAL---- 46
+Q+ A D D SNG I Y I+ G + F I+K TG IV YAL
Sbjct: 529 IQLTAVDADEGSNG-EISYEILV--GGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQA 585
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ P E+ I + +ALDR+ +R YI ++ +G P + T+ I V D+
Sbjct: 586 SDNAPPAERSTGILS--LGKALDRESTDR----YILIVTASDGRPDGTSTATVNIVVTDV 639
Query: 107 NDNEPMFD 114
NDN P+FD
Sbjct: 640 NDNAPVFD 647
>gi|393909081|gb|EFO24955.2| hypothetical protein LOAG_03530 [Loa loa]
Length = 2371
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D NG I Y ++ + + K F I+KE+G + T+ LD
Sbjct: 377 IKVTARDSDTGMNG-EISYSLMTSASDGWKHFKINKESGEIFTVSGLD------------ 423
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E +E ++ VIA+D+G PQLS+A +KI V D NDN P F +
Sbjct: 424 -------------AEYLREYHLHVIAKDHGNPQLSEAVVVKIEVLDKNDNPPRFSNL 467
>gi|332217517|ref|XP_003257905.1| PREDICTED: protocadherin-16-like [Nomascus leucogenys]
Length = 704
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G + T+ LDR E ++ + + V+A+D G
Sbjct: 601 FAIDSESGAISTIQTLDR-------------------------EVQEAVELRVVAQDLGE 635
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 636 PPLSATCLVSITVDDVNDNEPIFWRQVY 663
>gi|327270347|ref|XP_003219951.1| PREDICTED: protocadherin-1-like [Anolis carolinensis]
Length = 1234
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D SN + Y ++ P + FSID E+G ++ LDR+ ER +
Sbjct: 527 MEVSATDADSGSNAKLV-YSLVAEPSSKGIFSIDPESGEIRVKTVLDREQRERYE----- 580
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V+A D G+P ++ I V D NDN+P F
Sbjct: 581 --------------------FLVVAADKGSPSRKGTASVAINVMDRNDNDPKF 613
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E KE I ++A D+G P LS ++K+ V D+NDN+P+F +
Sbjct: 466 DYEAVKEYVIEIVAVDSGNPPLSSTNSLKVQVVDVNDNDPVFSQ 509
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 40 VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
+ L+ L + + EK+ + I + LDR E+ + +T+ +D G+P + + +
Sbjct: 214 AQKLFGLQVAEDQDEKQPQL---IVMGNLDR---EQSESYDLTIKVQDGGSPPRASSALL 267
Query: 100 KITVEDINDNEPMFDRVQY 118
+IT+ D+NDN P F++ Y
Sbjct: 268 RITILDMNDNAPKFEKPTY 286
>gi|301772738|ref|XP_002921791.1| PREDICTED: cadherin-related family member 2-like [Ailuropoda
melanoleuca]
Length = 1234
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ + A D D P +N + + ++ P FS+D + GI++ L LDR+ E
Sbjct: 528 VTIQAQDNDQPNTNNSRLHFSLLPGPYSH-NFSVDPDKGILRNLGPLDREAIE------- 579
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P I +TV+ D G P LS + I VEDINDN P+F++ Y
Sbjct: 580 -------------PALGGRIVLTVLVADCGVPVLSTEVNVTINVEDINDNLPIFNQSVY 625
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA D D GG I Y ++ PG A F++D +TG V
Sbjct: 428 IHAFDPDT-GEGGRITYSLL--PGNGADIFAVDPDTGTVT-------------------- 464
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
V+ + D E++ E ++T+ A D G LS + T+ + + DINDN P+
Sbjct: 465 ---VRNSNLLDREQQAEYHLTLQATDGG--NLSGSTTLHVVLLDINDNSPV 510
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N I+Y ++ + F ID+ +G++ T +D
Sbjct: 364 LKVTATDLDEGANSA-IKYSLLNS----TWFVIDETSGLISTRTHVDC------------ 406
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + VIA D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 407 -------------EADPAPILVVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLY 451
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIY----------------ITTDIRVQ 66
PG ++ ++ T ++ T+ A D D+ + EIY IT + +
Sbjct: 1591 PGSCYTLAVPENQGTSVIHTIAAADLDE-GKNGEIYYSIVGGNIGAKFILDSITGMLSMS 1649
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + +T+ A+D G P L C + + V D+NDN P F + QY
Sbjct: 1650 NLDR---EAVSKYILTISAKDKGRPSLETRCNLTVIVLDVNDNAPSFVQNQY 1698
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N + YR+ + F I TG IY+
Sbjct: 879 LQVTAVDLDT-GNNARLSYRLQGS----TAFRISPNTGW-----------------IYL- 915
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ +R +TV+A DNG+P + + ++ +TV D NDN+P F++ Y
Sbjct: 916 ----AQILDRETLDRHA---LTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFY 966
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYI 59
+++ A+D D N I Y I+ + A F+I +GIV+T LDR+ E+ +
Sbjct: 2106 VKLSASDADQGMNS-RILYHIVDGNPDNA-FTISPPYSGIVRTNIVLDREIREKYR---- 2159
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+IA D G PQL+ + + V DINDN+P F
Sbjct: 2160 ---------------------LTIIATDQGNPQLTGTAALSVRVIDINDNQPTF 2192
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D NG I+Y I + +R + F ID ETG+V ALD + ER +
Sbjct: 146 LAVNATDSDAGDNG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHE---- 200
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 201 ---------------------LVIVARDRGAQPLEASAFLSVRVTDVNDNQP 231
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P F R +Y
Sbjct: 302 LDRE----EKPVYDLSVEATDAGTPPLRAVRTFRLVVTDVNDNAPKFGRERY 349
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + A D G P L + +TV+D+NDN P+F++ +Y
Sbjct: 83 SLDR---EARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRY 131
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 33/121 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
M V ATD D NG +I A GE F +D TG++ T LDR
Sbjct: 1752 MSVRATDPDQGVNG-----KITYAIGEETSWLFRVDNLTGVITTAGPLDR---------- 1796
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPMFDRVQ 117
ER+ V+A D+G S ++I V D+NDN P+FD
Sbjct: 1797 ---------------ERQTSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYP 1841
Query: 118 Y 118
+
Sbjct: 1842 F 1842
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + Y +I + E A+FS+ E+GIV E+ + +
Sbjct: 1408 VRVVAVDKDAGDNG-RVSY-VITSANEEARFSVGYESGIVSL-----------ERPMVRS 1454
Query: 61 TDIRVQALDRDDPEREKEIYITVI---AEDNGTPQLSDACTMKITVEDINDNEPMFD 114
T++ + A D P R+ + + + + NG P+L A + ED+ P+ +
Sbjct: 1455 TELEITANDHGSPPRKSTLRLILTLASGQTNGPPRLLLANPVARISEDLQVGAPVLN 1511
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 31/111 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D N ++Y +++A + F++D +TG + T LDR+
Sbjct: 982 SVSASDSDLGKNA-LLRYAVVQA---NSSFTVDPDTGEITTKEPLDRE------------ 1025
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEP 111
K ++ V+ A D GTP + +K+TV D+NDN P
Sbjct: 1026 --------------TKGVHELVLEARDQGTPSRAARVPLKVTVLDVNDNSP 1062
>gi|410949124|ref|XP_003981274.1| PREDICTED: cadherin-related family member 2 [Felis catus]
Length = 1311
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ P FS+D + GI++ L LDR+ E
Sbjct: 609 IQAHDND-QPDTNNSHLHFSLLPGPYSH-NFSVDPDKGILRNLGPLDREAIE-------- 658
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P I +TV+ D G P LS + I VEDINDN P+F++ Y
Sbjct: 659 ------------PALGGRIVLTVLVADCGVPVLSTEVNITINVEDINDNLPVFNQSIY 704
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA D D +GG I Y ++ PG A F +D ++G V R E+
Sbjct: 508 IHAFDPDT-GDGGRITYSLL--PGNGADVFEVDPDSGTVTV----------RNSEL---- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
LDR E++ Y+T+ A D G +S + T+ I + D+NDN P+
Sbjct: 551 ------LDR---EKQAVYYLTLQATDGG--NMSTSTTLHIILLDVNDNPPV 590
>gi|291387870|ref|XP_002710487.1| PREDICTED: protocadherin LKC [Oryctolagus cuniculus]
Length = 1279
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPPSNGGT-IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ + A D D P + + Y ++ +P FS++ +TG++ L LDR+ E
Sbjct: 605 VTIQAQDKDEPGTSNSRLLYSLLPSPHSH-NFSVNPDTGLLTNLGPLDREAIE------- 656
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P E I +TV D G P S + ITVEDINDN P+F++ Y
Sbjct: 657 -------------PALEGRIVLTVQVADYGVPSRSTEVNVTITVEDINDNLPVFNQSSY 702
>gi|449267282|gb|EMC78248.1| Protocadherin-1, partial [Columba livia]
Length = 984
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A+D D SN + Y ++ P + F+ID ++G
Sbjct: 453 MEVSASDADSGSNAKLV-YSLVTDPSSKGSFTIDPDSG---------------------- 489
Query: 61 TDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+IRV+A LDR+ ER + V+A D G+P L ++ I V D NDN+P F
Sbjct: 490 -EIRVKAVLDREQRERYE---FLVVAADKGSPSLKGTASVAINVMDRNDNDPKF 539
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E K+ I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 392 DYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQ 435
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ +D G P + + ++IT+ D+NDN P F++ Y
Sbjct: 175 LTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALY 212
>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
Length = 14186
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD E K + + D + LDR E+E+ + + ++A D G PQ S T++ITV D N
Sbjct: 242 RDDVEGSKSVELVLD---KELDR---EKEQNVNLVMVAVDGGNPQRSGTATIQITVLDAN 295
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 296 DNAPVFEQAVY 306
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD E K + + D + LDR E+E+ + + ++A D G PQ S T++ITV D N
Sbjct: 1861 RDDVEGSKSVELVLD---KELDR---EKEQNVNLVMVAVDGGNPQRSGTATIQITVLDAN 1914
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 1915 DNAPVFEQAVY 1925
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E+E+ + + ++A D G PQ S T++ITV D NDN P+F++ Y
Sbjct: 2663 LDKELDREKEQNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVY 2714
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ITV A D+GTP LS + T+ + + D+NDN P+F++ Y
Sbjct: 12979 DRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSY 13025
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ITV A D+GTP LS + T+ + + D+NDN P+F++ Y
Sbjct: 13789 DRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSY 13835
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRD---DPEREKEIYITVIAEDNGTPQLSDAC 97
K +Y + RD E ++T + AL D E+ I V D G+PQLS C
Sbjct: 11573 KIMYHISRDS-NLETSSFLTINSETGALFTSRLFDYEQSVHFQIKVTVHDGGSPQLSSTC 11631
Query: 98 TMKITVEDINDNEPM 112
T+ + ++D NDN P+
Sbjct: 11632 TVNVFIKDQNDNAPV 11646
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER + + +IA D GTPQ S + ITV D NDN P+F++ Y
Sbjct: 12769 DRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVY 12815
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER + + +IA D GTPQ S + ITV D NDN P+F++ Y
Sbjct: 13579 DRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVY 13625
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+D +KE+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 1037 LDRED---QKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 1084
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+D +KE+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 3503 LDRED---QKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 3550
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + E IT+ A D G+P L+ +KI V DINDN P F + +Y
Sbjct: 11498 DREFQSEYNITITATDAGSPPLASVKILKIVVNDINDNPPTFTQREY 11544
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F++ Y
Sbjct: 1247 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEKESY 1293
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E++ E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 5906 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 5957
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E++ E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 7350 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 7401
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E++ E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 8139 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 8190
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E++ E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 8914 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 8965
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD++ D E++ E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 10500 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 10551
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+D ++E+ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 5122 LDRED---QREMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY 5169
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 10715 DRELVSDYNITISATDEGSPPLSSSKTLNLSVADINDNPPVFEEESY 10761
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 470 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 516
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 2089 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 2135
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 2878 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 2924
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 3713 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 3759
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 4516 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 4562
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 5332 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 5378
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 6121 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 6167
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 6776 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 6822
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 7565 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 7611
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 8354 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 8400
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 9129 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 9175
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 9926 DRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 9972
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 58 YITTDIR---VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
Y+T D + A+ D E+ K++ TV A+D G+P LS ++KI ++D NDN P
Sbjct: 12276 YVTVDAESGVIHAVRSFDYEQIKQLVFTVKAQDGGSPPLSSNVSVKILIQDQNDNPP 12332
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E E IT++A D G+P L T+ + V D+NDN P F Y
Sbjct: 12181 ALDR---ETLSECNITILALDGGSPPLHTRRTLFVKVSDVNDNAPSFSYASY 12229
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E +K++ + + A D G+PQ S + +TV D NDN P+F + Y
Sbjct: 9716 DREEQKDMKLKLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQALY 9762
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 1350 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 1396
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 2192 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 2238
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 2981 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 3027
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 3816 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 3862
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 4619 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 4665
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 5435 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 5481
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 6224 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 6270
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 6879 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 6925
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 7668 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 7714
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 8457 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 8503
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 9232 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 9278
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 10029 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 10075
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 10818 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 10864
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A D E+ KE+ I V A+D G+P LS T+KI ++D NDN P
Sbjct: 13082 ISAARSFDYEQIKELQIVVKAQDGGSPPLSSNVTVKILIQDQNDNPP 13128
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 573 IHAVRAFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 619
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E KE+ + + A D G+PQ S + + I V D NDN P+F + Y
Sbjct: 4306 DRESLKEMSLILTALDGGSPQRSGSVKIHINVLDANDNVPVFSQAVY 4352
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A D E+ KE+ I V A+D G+P LS ++KI ++D NDN P
Sbjct: 13892 ISAARSFDYEQIKELQIVVKAQDGGSPPLSSNVSVKILIQDQNDNPP 13938
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
M V+A+D+D SNG + Y K+ G F ID +TG
Sbjct: 12034 MTVNASDIDSGSNG-KVTYSFSKSKAGVTDAFDIDGDTG--------------------- 12071
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+ D E++K I + A+D G L+D+ +++ V D+NDN P+ + + +
Sbjct: 12072 ----RITVAKEIDFEKDKRIEFRIEAKDQG--GLTDSAKVEVEVLDVNDNAPVINVMSF 12124
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR E + + + ++A D G PQ S + + + D NDN P+F++ Y
Sbjct: 11970 KSLDR---ETQPRLSLKLLAVDGGNPQRSGTVNIDVDILDANDNAPVFNQSLY 12019
>gi|335293735|ref|XP_003357039.1| PREDICTED: protocadherin-16-like [Sus scrofa]
Length = 712
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 38/131 (29%)
Query: 1 MQVHATDVDPP-SNGGTIQYRII-----------KAPGE-RAKFSIDKETGIVKTLYALD 47
++V A+D D P ++ ++Y ++ K P E F+I E+G++ T +LD
Sbjct: 559 VRVSASDADEPGTDHAQVRYTLLPLPAPCSPEALKPPAECGPSFTIHLESGVISTTRSLD 618
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
R E ++ + + V+A+D G P LS C + I+VED+N
Sbjct: 619 R-------------------------EIQEVVELRVVAQDLGEPPLSATCLVSISVEDVN 653
Query: 108 DNEPMFDRVQY 118
DNEP+F + Y
Sbjct: 654 DNEPIFLKQVY 664
>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
Length = 3360
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 38/129 (29%)
Query: 3 VHATDVDPP-SNGGTIQYRII-----------KAPGE-RAKFSIDKETGIVKTLYALDRD 49
V A+D D P ++ ++Y ++ + P E FSID E+G++ T +LDR
Sbjct: 553 VSASDADEPGTDHARLRYALLPLPALCNPETPRPPAECGPSFSIDPESGVISTTRSLDR- 611
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ I + V+A D G P LS C + I V+D+NDN
Sbjct: 612 ------------------------EAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDN 647
Query: 110 EPMFDRVQY 118
EP+F + Y
Sbjct: 648 EPVFLKQVY 656
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D SNG ++Y I+ + F +D +G++ LD E T
Sbjct: 2250 VQVFATDLDSGSNG-LVEYSILSG-NQGNVFQMDPLSGVLTASAILDY-------EYTST 2300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA+D+ G P+LSD +KI V DINDN P+F
Sbjct: 2301 YSLIVQAMDK------------------GMPRLSDTTVIKIQVTDINDNAPIF 2335
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 4 HATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP + G + + I+ E F +D+ +G + T LD +
Sbjct: 1628 HITAQDPDAGRNGRVTFSILSG-NENMAFMLDESSGFLTTASPLD-------------YE 1673
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ Q + +T++A D GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1674 IKSQHI------------LTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLY 1717
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D SNG + Y II + F++++ +G + T ALDR
Sbjct: 1840 ASDMDAGSNGA-VTYHIIDGNTDEY-FAVNEMSGELSTTRALDR---------------- 1881
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++ D G+P S +++ V D ND+ P F R+QY
Sbjct: 1882 ---------EEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQY 1926
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ++A D+G P LS + T+ I V D++DN P F ++Y
Sbjct: 2612 DREATASHELVLLAFDHGCPPLSSSATVSIEVLDVDDNPPAFSSLEY 2658
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 38 GIVKTLYALDRDDPER-EKEIYITTDIRVQALDRD----------DPEREKEIYITVIAE 86
G++ + A+DRD + + ++ +D + ++ + D E+ + V+
Sbjct: 1196 GVIGKITAIDRDSGKNGQLSYFLLSDEKFFKMNPNTGELISWVALDHEQRAHHQVAVLVS 1255
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D+G+P S + ++V DINDN P F
Sbjct: 1256 DHGSPPRSATTLVHVSVTDINDNRPYF 1282
>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
Length = 3360
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 38/129 (29%)
Query: 3 VHATDVDPP-SNGGTIQYRII-----------KAPGE-RAKFSIDKETGIVKTLYALDRD 49
V A+D D P ++ ++Y ++ + P E FSID E+G++ T +LDR
Sbjct: 553 VSASDADEPGTDHARLRYALLPLPALCNPETPRPPAECGPSFSIDPESGVISTTRSLDR- 611
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ I + V+A D G P LS C + I V+D+NDN
Sbjct: 612 ------------------------EAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDN 647
Query: 110 EPMFDRVQY 118
EP+F + Y
Sbjct: 648 EPVFLKQVY 656
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D SNG ++Y I+ + F +D +G++ LD E T
Sbjct: 2250 VQVFATDLDSGSNG-LVEYSILSG-NQGNVFQMDPLSGVLTASAILDY-------EYTST 2300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA+D+ G P+LSD +KI V DINDN P+F
Sbjct: 2301 YSLIVQAMDK------------------GMPRLSDTTVIKIQVTDINDNAPIF 2335
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 4 HATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP + G + + I+ E F +D+ +G + T LD +
Sbjct: 1628 HITAQDPDAGRNGRVTFSILSG-NENMAFMLDESSGFLTTASPLD-------------YE 1673
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ Q + +T++A D GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1674 IKSQHI------------LTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLY 1717
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 27/114 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D SNG + Y II + F++++ +G + T ALDR
Sbjct: 1840 ASDMDAGSNGA-VTYHIIDGNTDEY-FAVNEMSGELSTTRALDR---------------- 1881
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++ D G+P S +++ V D ND+ P F R+QY
Sbjct: 1882 ---------EEVSNFTLVILCSDLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQY 1926
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + ++A D+G P LS + T+ I V D++DN P F ++Y
Sbjct: 2612 DREATASHELVLLAFDHGCPPLSSSATVSIEVLDVDDNPPAFSSLEY 2658
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 38 GIVKTLYALDRDDPER-EKEIYITTDIRVQALDRD----------DPEREKEIYITVIAE 86
G++ + A+DRD + + ++ +D + ++ + D E+ + V+
Sbjct: 1196 GVIGKITAIDRDSGKNGQLSYFLLSDEKFFKMNPNTGELISWVALDHEQRAHHQVAVLVS 1255
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D+G+P S + ++V DINDN P F
Sbjct: 1256 DHGSPPRSATTLVHVSVTDINDNRPYF 1282
>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
Length = 2493
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D SNG ++Y I+ + G+ + FSI + +G V + LDR
Sbjct: 148 LAVRASDADSGSNG-EVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDR------------ 194
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + V A+D G P S T+KIT+ D+ND P F + Y
Sbjct: 195 -------------EKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVY 239
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
++V A+D D N I Y + F+ID GI++TL LDR+ PE E
Sbjct: 666 IEVSASDADIGKNAQII-YSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYE----- 719
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A D GTP + +K+ +ED+ D+ P+F++ Y
Sbjct: 720 ---------------------LTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLY 757
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 32/120 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGER----AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
V A+D D SNG I+Y + +P + FSID+ TG++ T LDR
Sbjct: 42 VSASDPDSGSNG-MIRYSM--SPSQNLMSATYFSIDQITGVITTKRGLDR---------- 88
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR + V AED G P L + I V D+NDN P+F+R Y
Sbjct: 89 -------EFLDRH--------FFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIY 133
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D SN I Y I E FS+D+ TG++KT +LDR
Sbjct: 563 LTVLATDRDTGSNA-KISYSIATLVPE---FSVDETTGVIKTAGSLDR------------ 606
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ V A D+G PQL + I + D+NDN+P+F + Y
Sbjct: 607 -------------EKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSY 651
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ VHATD+D NG ++Y++ + FS+D E+G + T LDR+D
Sbjct: 2740 LTVHATDLDSGRNG-LVRYQLRNSGDLDNAFSVDAESGKIYTNVKLDREDVGH------- 2791
Query: 61 TDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
Y+ ++ A D G PQ S T+ +TV D NDN P F R+
Sbjct: 2792 -------------------YVLIVEAVDQGAPQRSGTATVSVTVADKNDNPPRFTRL 2829
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 28/111 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV PP+N T Y I+ G +A F ID +GI++T+ LDR
Sbjct: 3493 DVRPPNNEFT--YSILGGEGSKA-FRIDPRSGIIETVSLLDR------------------ 3531
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
ER+ +TV A D G P + + I ++DINDN P+F+ V
Sbjct: 3532 -------ERQAVYNVTVGAIDRGVPPQTGTTEVHIVIQDINDNGPVFEPVH 3575
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N + R + G++ F ++ TG + L +LDR+ R +
Sbjct: 2317 ITVQAHDADSPPYN----RVRYLIKDGDKGLFRVNGTTGEISVLRSLDRETQSRYE---- 2368
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+A D+G P L+ T+ I VEDIND+ P F + QY
Sbjct: 2369 ---------------------IIVVAMDSGVPVLTGTGTVLIFVEDINDHSPEFSQSQY 2406
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V ATD D NGG I Y I + G+ KF ID+ +G + ALDR+ +R
Sbjct: 1252 FRVVATDADDQLNGG-IFYYITEGNGDH-KFRIDEASGQIVLNRALDRETSDRYT----- 1304
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G P LS + T+ I V D NDN P F
Sbjct: 1305 --------------------LTIGARDAGLPNLSTSTTVIIDVLDENDNAPEF 1337
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
++ FSID ++G +KTL DR ER +Q +D I + +
Sbjct: 1165 SQSDFSIDPKSGFIKTLRYFDR---ER----------LLQTTGQD------YIVLEAVVS 1205
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG +L D + + + D+NDN P F RV Y
Sbjct: 1206 DNGVIRLRDRARIHVFILDVNDNAPAFSRVPY 1237
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E+ + V A+D G P LS T+ V D+NDN P+FD + Y
Sbjct: 1938 RLDYEQVQHYIFVVQAQDTGRPSLSSTVTVYFNVLDLNDNAPLFDPMSY 1986
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++ + D E + ++ + A+D G P L + IT+ D+NDN P+FD Y
Sbjct: 209 LHLETTGKLDRETQNHYWLNISAQDGGRPALLGYLIVNITIVDVNDNPPIFDHSDY 264
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E ++ ++ + A D G P L + + ITVED NDN P+F
Sbjct: 1401 DFEMQRSYHLNITASDQGNPSLVSSISFVITVEDANDNAPVF 1442
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG ++Y I+ F I +++GI++ L+
Sbjct: 2211 LQVSATDLDEGLNG-RVRYTIVGGD-INFDFHIGEDSGIIRVAKNLNF------------ 2256
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER + +T+ ED+G D T IT+ DINDN P+F
Sbjct: 2257 -------------ERRSQYVLTIQVEDSGNDVRYDTATATITIMDINDNAPIF 2296
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR E+ + +T++A D+G+P + I V D+ND+EP+F++ +Y
Sbjct: 435 VRVNGVLDR---EKISKYNLTIVATDSGSPARKALAFLIIHVNDVNDHEPIFEKSEY 488
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 30/117 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDD-PEREKEIYITT 61
A D D +NG ++ Y +R F+ID TG V T LDR+ PE E
Sbjct: 613 AVDHDQGTNG-SVSYMFDSQMDQRYPGIFAIDASTGRVTTRTKLDREVIPEYE------- 664
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+A D G P LS T+ + V D NDN P F QY
Sbjct: 665 -------------------IKVVARDQGNPPLSSTATIVLRVLDANDNSPEFYPQQY 702
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D I Y I K P E FSID +G EI
Sbjct: 2947 QVTAADRDKQGPNAMITYSI-KHPSEF--FSIDLTSG-----------------EILSKQ 2986
Query: 62 DIRVQALDR-DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R + ++ PE ++I +A DNG P LS C + + V + N P FD+ +
Sbjct: 2987 TVRYKHTNKGSSPENMYTLWI--VATDNGKPPLSSECLVSVNVINANSYAPRFDKSVF 3042
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A D+G+P LS + + +ED+ND+ P+F+ Y
Sbjct: 982 ESSLTLEVTATDDGSPPLSSRQLVTLNLEDVNDHTPVFEYSSY 1024
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 25/120 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD--RDDPEREKEIY 58
MQV ATD D N + Y I ++ +F++D ETG++ T L+ R P+
Sbjct: 279 MQVTATDNDAGENA-RVTYYISES---ETQFAVDAETGVITTTEQLNCQRSCPQLVSSC- 333
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K TV A D+G P+ + + + D ND++P+ R +Y
Sbjct: 334 -----------------NKSCVFTVFARDHGNPRQDGRTYVTVNLLDANDHDPII-RFRY 375
>gi|312072546|ref|XP_003139115.1| hypothetical protein LOAG_03530 [Loa loa]
Length = 2282
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D NG I Y ++ + + K F I+KE+G + T+ LD
Sbjct: 288 IKVTARDSDTGMNG-EISYSLMTSASDGWKHFKINKESGEIFTVSGLD------------ 334
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E +E ++ VIA+D+G PQLS+A +KI V D NDN P F +
Sbjct: 335 -------------AEYLREYHLHVIAKDHGNPQLSEAVVVKIEVLDKNDNPPRFSNL 378
>gi|195350167|ref|XP_002041613.1| GM16649 [Drosophila sechellia]
gi|194123386|gb|EDW45429.1| GM16649 [Drosophila sechellia]
Length = 264
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 125 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHIDC----------- 172
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+ D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 173 --------------ETEPVPQLTVVVRDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 217
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 18 QYRIIKAPGER-AKFSI---DKETGIVKTLYALDRDDPE-----REKEIYITTDIRVQAL 68
+YR PGE A+ S+ D +T L+ D R+ IY+ I L
Sbjct: 6 KYRESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLV--IVHLPL 63
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DR E ++V+A D GTP L + ++ + + D+NDN P F++ Y
Sbjct: 64 DR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLY 110
>gi|426396596|ref|XP_004064522.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Gorilla
gorilla gorilla]
Length = 1347
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|449475315|ref|XP_002186680.2| PREDICTED: protocadherin-1 [Taeniopygia guttata]
Length = 1193
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D SN + Y ++ P + F+ID ++G
Sbjct: 658 MEVSATDADSGSNAKLV-YSLVTDPSSKGSFTIDPDSG---------------------- 694
Query: 61 TDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+IRV+A LDR+ ER + V+AED G+P ++ I V D NDN+P F
Sbjct: 695 -EIRVKAVLDREQRERYE---FLVVAEDKGSPSKQGTASVAINVMDRNDNDPKF 744
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E KE I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 597 DYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVMDVNDNAPVFSQ 640
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G Y ++ P + F + A D+D E++ ++ + ++ + D D
Sbjct: 333 GVASYELMAGPEAQELFGLQ---------VAEDQD--EKQPQLIVMGNLDREQWDSYD-- 379
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ +D G P + + ++IT+ D+NDN P F++ Y
Sbjct: 380 ------LTIKVQDGGNPPRASSALLRITILDMNDNAPKFEKALY 417
>gi|410056704|ref|XP_003954078.1| PREDICTED: protocadherin-11 X-linked-like [Pan troglodytes]
Length = 1347
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|119514216|gb|ABL75879.1| protocadherin 2G4 [Takifugu rubripes]
Length = 940
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD E K + + D + LDR E+E+ + + ++A D G PQ S T++ITV D N
Sbjct: 177 RDDVEGSKSVELVLD---KELDR---EKEQNVNLVMVAVDGGNPQRSGTATIQITVLDAN 230
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 231 DNAPVFEQAVY 241
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 414 ITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 451
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 508 IHAVRAFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 554
>gi|281337635|gb|EFB13219.1| hypothetical protein PANDA_019861 [Ailuropoda melanoleuca]
Length = 1017
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDSDSGHNA-EINYLLGIDAPSE---FNLDHHTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEY 575
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ YI V ED G PQ S ++I+V D NDN P+F
Sbjct: 207 LDRE----EKDTYIMKVKVEDGGFPQRSSTAILQISVADTNDNSPVF 249
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDPQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGK 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + I V D+NDN+P+F
Sbjct: 651 VSHSSTAKVTINVVDVNDNKPLF 673
>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
Length = 3474
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRII-KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N I Y ++ + F ID +G+V T +D +
Sbjct: 463 IQVLATDKDE-GNNSAISYSLLDTVETHSSWFQIDPRSGLVTTRAHVDCET--------- 512
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP +TV+A DNG P LS + T+ +T+ D+NDNEP+FD+ Y
Sbjct: 513 ------------DPVPR----LTVVATDNGFPPLSSSATVLVTIHDVNDNEPIFDQSFY 555
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + LDR E Y+T+ A+D G P + +C + + VED NDN+P FD +Y
Sbjct: 1943 TGALTAKPLDR---ESHSRYYLTITAQDRGKPSMMGSCNITVMVEDQNDNDPKFDLSKY 1998
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D +NG ++Y+I+ F++D + G + LD + +R I
Sbjct: 944 HARDRDSGANG-VVRYKIVNNGATGGLFNVDPKLGHLTLTRHLDYETTQRHSLI------ 996
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ A D G P LS T+ + V+D+NDN P+F+R +Y
Sbjct: 997 -------------------ITATDTGIPPLSANLTVLVEVQDVNDNPPVFERNEY 1032
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N + YR++ F I +G + +LDR+ +R +
Sbjct: 1047 LQVTAVDLDT-GNNARLTYRLLPGNNTGEVFGIFPNSGWLYLKGSLDRETKDRYE----- 1100
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A DNGTP LS + + V D NDN+P F + Y
Sbjct: 1101 --------------------LTVTATDNGTPSLSATAKVLVKVSDANDNDPKFMKESY 1138
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L + IT++D+
Sbjct: 162 RLSSHRERDGVLYLDLQINGFLDR---ETTPAYSLVIEALDGGTPPLRGEMRVNITIQDV 218
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 219 NDNQPIFNQSRY 230
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N I+Y + + A F I+ E +GI+KT LDR+ + K
Sbjct: 2331 LQVVAFDDDEGHNS-RIRYHFLDGNHDNA-FKIEPEFSGILKTNIVLDREIRDNYK---- 2384
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TVIA D G PQ++ + I V D+NDN+P F
Sbjct: 2385 ---------------------LTVIATDEGVPQMTGTARIVINVVDVNDNQPTF 2417
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID ETG+++ DP+ D E KEI + V A+ G
Sbjct: 2252 FNIDTETGVIQV------HDPKNL-----------------DYELHKEIRLVVEAKTEGG 2288
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L C + + + DINDN P F + QY
Sbjct: 2289 PVLHGYCEVVMQLTDINDNAPKFTQQQY 2316
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E + + V+A D G P L + T+ + V DINDN P
Sbjct: 388 RDNIIYLV--IVSLPLDR---ELQPNYTLDVVATDRGNPPLHASRTINLMVTDINDNAPE 442
Query: 113 FDRVQY 118
FD+ Y
Sbjct: 443 FDQEVY 448
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y ++K F ID TG+++T LD +
Sbjct: 1363 VRVRAVDSDNGQNA-SITYSLLKRQDSDGYGVFKIDPLTGVIRTRMMLDHE--------- 1412
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
EK IY + V+A D G P +++ V D+NDN P F
Sbjct: 1413 -----------------EKTIYRLAVVASDAGKPPKQTVRVLRVEVLDLNDNRPTF 1451
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D NG I+Y I + +R F ID TG++ LD + E +
Sbjct: 245 LQVFATDKDSGENG-QIEYSINRRQSDRDNMFRIDPTTGLIVVNKPLDFETKELHE---- 299
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ ++A+D+G L + I V D+NDN+P + +
Sbjct: 300 ---------------------LVIVAKDHGLQPLETTAFVSIRVTDVNDNQPTINVI 335
>gi|426396598|ref|XP_004064523.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Gorilla
gorilla gorilla]
Length = 1337
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|443704240|gb|ELU01385.1| hypothetical protein CAPTEDRAFT_135638 [Capitella teleta]
Length = 605
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D D N I Y +++ PG + F I+ TG+V T +D
Sbjct: 473 IQLEAIDEDY-GNNSMITYELLRTPGSHWEWFQINNRTGLVTTRSPVD------------ 519
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V+A D+GTP LS T+ I + D+NDN+P+FD+ Y
Sbjct: 520 -------------CEMSSEPRLQVVATDSGTPPLSTTVTVIIHITDVNDNQPVFDQSFY 565
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATDVD NG I+Y+I + + F I+ E+G + LD +D
Sbjct: 255 LQVFATDVDSGENG-KIRYQIDRQRSDPNGNFDINSESGTIVINKELDYED--------- 304
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
++A + + V+A DNGT +L + + V +INDN P +
Sbjct: 305 -----IKAYE-----------LIVVARDNGTQKLQTTAIVSVQVLNINDNAPTISLI 345
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A D GTP L T+ + V D NDN P F + Y
Sbjct: 421 LTVVASDMGTPPLVSTETLTLYVTDTNDNAPRFSQSTY 458
>gi|426257903|ref|XP_004022561.1| PREDICTED: protocadherin-11 X-linked-like isoform 6 [Ovis aries]
Length = 1022
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|119514218|gb|ABL75881.1| protocadherin 2G6 [Takifugu rubripes]
Length = 940
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD E K + + D + LDR E+E+ + + ++A D G PQ S T++ITV D N
Sbjct: 177 RDDVEGSKSVELVLD---KELDR---EKEQNVNLVMVAVDGGNPQRSGTATIQITVLDAN 230
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 231 DNAPVFEQAVY 241
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 414 ITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 451
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 508 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 554
>gi|301788426|ref|XP_002929629.1| PREDICTED: protocadherin-11 X-linked-like, partial [Ailuropoda
melanoleuca]
Length = 1044
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDSDSGHNA-EINYLLGIDAPSE---FNLDHHTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEY 575
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ YI V ED G PQ S ++I+V D NDN P+F
Sbjct: 207 LDRE----EKDTYIMKVKVEDGGFPQRSSTAILQISVADTNDNSPVF 249
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDPQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGK 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + I V D+NDN+P+F
Sbjct: 651 VSHSSTAKVTINVVDVNDNKPLF 673
>gi|297710482|ref|XP_002831909.1| PREDICTED: protocadherin-11 X-linked-like, partial [Pongo abelii]
Length = 845
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 307 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 221 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 279
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 280 NDNAPVF 286
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|75072040|sp|Q6WYY1.1|PC11X_PANPA RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome;
Short=PCDH-X; Flags: Precursor
gi|37813462|gb|AAR04489.1| protocadherin X precursor long isoform [Pan paniscus]
Length = 1347
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|397478153|ref|XP_003810420.1| PREDICTED: protocadherin-11 X-linked-like [Pan paniscus]
gi|75072431|sp|Q71M42.1|PC11X_PANTR RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome;
Short=PCDH-X; Flags: Precursor
gi|33317689|gb|AAQ04773.1| putative protocadherinX [Pan troglodytes]
Length = 1347
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|75072038|sp|Q6WXV7.1|PC11X_PONPY RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome;
Short=PCDH-X; Flags: Precursor
gi|32966126|gb|AAP92138.1| protocadherin X long isoform [Pongo pygmaeus]
Length = 1347
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|75072044|sp|Q6X862.1|PC11X_GORGO RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome; Flags:
Precursor
gi|32330110|gb|AAP79576.1| protocadherinX precursor [Gorilla gorilla]
Length = 1347
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR E++ + V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDR---EKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + ITV D DN P+F +V Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3570 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3616
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3617 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3652
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 27/96 (28%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
+ I + E FSI+ +TG + LDR+
Sbjct: 3483 FYFIGSGNENGAFSINPQTGQITVTAELDRE--------------------------TLP 3516
Query: 79 IY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3517 IYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3552
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2730 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSIRPLDR------------ 2775
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2776 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2818
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D N +I+ G ++F+I+ TG + T LDR
Sbjct: 2428 VNASDADASMNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2467
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2468 -----------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2513
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQQSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1124 AVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|426257893|ref|XP_004022556.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Ovis aries]
Length = 1344
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|426257899|ref|XP_004022559.1| PREDICTED: protocadherin-11 X-linked-like isoform 4 [Ovis aries]
Length = 1336
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|410913759|ref|XP_003970356.1| PREDICTED: uncharacterized protein LOC101078623 [Takifugu rubripes]
Length = 3537
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 32 SIDKETGIVKTLYALDRDDPEREK--------------EIYITTDIRVQAL-DRD-DPER 75
S+ +++G+ L + +DP+ E EI T++ L +R+ D ER
Sbjct: 2256 SVPEDSGLKTVLALMSVNDPDSENNGKVQCMINENIPFEIKFTSNNVYSLLTERELDRER 2315
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 2316 ESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 2358
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 405 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 451
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 3139 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 3185
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 1217 ALDR---EIAHQYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 1265
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + AED G P++S + ITV D+NDN P+F + Y
Sbjct: 195 DREKQEQISLVLTAEDGGEPRMSGTMLIIITVLDVNDNAPVFTQSTY 241
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ I + + AED G PQ++ + + V D+NDN P+F + Y
Sbjct: 2103 DREKQEHISLLLTAEDGGEPQMTGTMRIYVAVLDVNDNAPVFTKPVY 2149
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ I + + AED G PQ++ + + V D NDN P+F + Y
Sbjct: 1784 DREKQEHISLLLTAEDGGEPQMTGTMRIYVAVLDANDNAPVFTKPVY 1830
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 508 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 554
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 1322 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 1368
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 2415 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 2461
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 3242 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 3288
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 29/110 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D +N I Y I A G K F I+KE G +I +
Sbjct: 258 VTASDADDGANN-KITYSITNALGNVKKLFDINKENG-----------------QISLIG 299
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D+ D E+ + I ++A D G L+D+C + + V D+NDN+P
Sbjct: 300 DM--------DFEKYQHFQINLLASDEGG--LTDSCKLIVDVRDVNDNKP 339
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + + A D G PQ+S + ITV D+NDN P+F + Y
Sbjct: 2929 DREENEIMSLALTAVDGGEPQMSGTIQILITVLDVNDNAPVFTQPVY 2975
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++I + + A D G P++S + + V D NDN P+F + Y
Sbjct: 1009 DREHREQIIMFLSALDGGQPRMSGTMQITVNVLDANDNAPVFTKSVY 1055
>gi|444732649|gb|ELW72931.1| Protocadherin-11 X-linked [Tupaia chinensis]
Length = 907
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N I AP E F++D+ TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEVSYLLGIDAPSE---FNLDRRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLITNATVFLTVLDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAFLDYESTKEYAIKLLAADAGKPPLNQSAMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|443686141|gb|ELT89521.1| hypothetical protein CAPTEDRAFT_222417 [Capitella teleta]
Length = 1123
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 25/89 (28%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
G F+ID ++G +KTL LDR+D ++IY YIT IA
Sbjct: 607 GHSGTFAIDPDSGEIKTLQVLDRED----RDIY---------------------YITAIA 641
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFD 114
D P LS +C + I VED+NDN P+ +
Sbjct: 642 TDLDQPLLSSSCMVVIKVEDVNDNFPVIE 670
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A DR D E K++ TV A D +P S + IT+ D+ND P+F + QY
Sbjct: 516 VRASDRFDYETTKKLQFTVRARDGASPPRSSTARVTITILDLNDQPPIFTKPQY 569
>gi|426257895|ref|XP_004022557.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Ovis aries]
Length = 1307
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
Length = 4555
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + L ALD
Sbjct: 3255 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVLEALDY------------ 3300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + ++NDN P F + Y
Sbjct: 3301 -------------ETCKRFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVY 3345
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N + Y+I++ F ID +G++ T LD
Sbjct: 2306 LQLVSTDADS-GNNKLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2353
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P +S + I + D+NDN P+F+++ Y
Sbjct: 2354 --------------ELVQHCTLKVTATDNGFPSMSSEVLVHIYISDVNDNPPVFNQLIY 2398
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3364 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3405
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3406 ----------ERVSGYSLLIQAVDSGIPSMSSTTTVNIDISDVNDNSPVFTPANY 3450
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID E+G++ LDR
Sbjct: 1062 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFSIDDESGVITAADILDR------------ 1107
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1108 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1146
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ +LD
Sbjct: 1795 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIASLDH------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1841 -------------EAIAHFHFHVHVRDSGSPQLTAESPVEVNIEVIDVNDNPPVFTQAVF 1887
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ +++Y+
Sbjct: 745 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HRDLYL- 797
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + + VED NDN P+F + Y
Sbjct: 798 --------------------LNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSY 835
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGIV LDR+ K Y
Sbjct: 850 IQVEARDKDLGSNG-EVMYSVLT---DTHQFTINSSTGIVSVADQLDRE----SKANY-- 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A RD E ++++ V T+KI ++D+ND P F Y
Sbjct: 900 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAFIPTSY 940
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID I+ T ER
Sbjct: 2515 IHVPATDGDPGTYG-QISYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2557 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2604
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A F+I++ TG++ T LD PE + I
Sbjct: 491 LTVSASDKDKGENG-YITYSI--ASLNLLPFAINQFTGVISTTEELDFESSPETYRFI-- 545
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I V +INDN P+F++V
Sbjct: 546 -----VRASDWGSPYRHESEVNVT------------------IRVGNINDNSPLFEKV 580
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID +G++ LDR E++ I+V A D
Sbjct: 3177 FSIDSSSGVIILERPLDR-------------------------EQQSSYNISVRATDQSP 3211
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3212 RQSLSSLASVTITVLDINDNPPVFERRDY 3240
>gi|301609759|ref|XP_002934429.1| PREDICTED: neural-cadherin-like [Xenopus (Silurana) tropicalis]
Length = 2520
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++ G FSI +TGI+ T+ + DR
Sbjct: 460 LQVEAKDADYGVNG-QVKYGMVHKEGTLPAFSIHPDTGIITTVQSFDR------------ 506
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++KE IT+ A D L C + I + D NDN+P F+ +Y
Sbjct: 507 -------------EKQKEYPITIKATDQAAEPLIGLCQINILILDENDNDPSFENNRY 551
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A+D D NG I+Y I + +F +D G VK ALDR
Sbjct: 1318 QVIASDADSGING-QIRYSIWPSSDVLGEFFVDP-AGFVKVKKALDR------------- 1362
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + + ++ ++A D G P + + T+ ++ D+NDN P+FD
Sbjct: 1363 ------------EVDSQYHLVILASDEGFPSQTGSATVSFSLLDVNDNGPVFD 1403
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D NG I Y I++ G+ F ID +TG + T DR+ + Y+
Sbjct: 778 LQVSATDQDLGLNG-EITYSILEDRNGDHVLFHIDPQTGSIFTASVFDRE----TRSSYL 832
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +++ D + R + +G P SD ++I + D+NDN+P F + Y
Sbjct: 833 ---LEIKSSDGSESARPGK---------HGQPN-SDTAYVRIFISDVNDNKPSFTQSAY 878
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V AL D E++KE Y+ +I D+G P +S + IT+ D NDN
Sbjct: 1469 VHALRAFDREKDKEFYLPIIITDSGNPPMSATNMLLITIGDENDN 1513
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 21/101 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI- 59
+QV ATD D N Y E A FSI + GI+ + ALD + P E I
Sbjct: 249 LQVMATDCDSGFNSEVSYYT------ESADFSISAQ-GIISPVRALDYERPGHLYEFVIL 301
Query: 60 -------------TTDIRVQALDRDDPEREKEIYITVIAED 87
T IR+ ++ + PE + IY T ++ED
Sbjct: 302 AVDKGDKPNTGTATVRIRISNVNDEAPEFSQTIYRTFVSED 342
>gi|281342459|gb|EFB18043.1| hypothetical protein PANDA_010702 [Ailuropoda melanoleuca]
Length = 1109
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 3 VHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ A D D P +N + + ++ P FS+D + GI++ L LDR+ E
Sbjct: 450 IQAQDNDQPNTNNSRLHFSLLPGPYSH-NFSVDPDKGILRNLGPLDREAIE--------- 499
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P I +TV+ D G P LS + I VEDINDN P+F++ Y
Sbjct: 500 -----------PALGGRIVLTVLVADCGVPVLSTEVNVTINVEDINDNLPIFNQSVY 545
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA D D GG I Y ++ PG A F++D +TG V
Sbjct: 348 IHAFDPDT-GEGGRITYSLL--PGNGADIFAVDPDTGTVT-------------------- 384
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
V+ + D E++ E ++T+ A D G LS + T+ + + DINDN P+
Sbjct: 385 ---VRNSNLLDREQQAEYHLTLQATDGG--NLSGSTTLHVVLLDINDNSPV 430
>gi|32966125|gb|AAP92137.1| protocadherin X short isoform [Pongo pygmaeus]
Length = 1025
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|410932249|ref|XP_003979506.1| PREDICTED: protocadherin gamma-A11-like [Takifugu rubripes]
Length = 856
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD E K + + D + LDR E+E+ + + ++A D G PQ S T++ITV D N
Sbjct: 272 RDDVEGSKSVELVLD---KELDR---EKEQNVNLVMVAVDGGNPQRSGTATIQITVLDAN 325
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 326 DNAPVFEQAVY 336
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 509 ITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 546
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 603 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 649
>gi|156333666|ref|XP_001619382.1| hypothetical protein NEMVEDRAFT_v1g4597 [Nematostella vectensis]
gi|156202470|gb|EDO27282.1| predicted protein [Nematostella vectensis]
Length = 175
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 24/114 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +N + Y I+ G KF I++ L+ LD +
Sbjct: 53 IRVSATDADEGTNA-QLAYNIVS--GGDGKF-------IIEGLFTLDP----------VL 92
Query: 61 TDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IRV + LDR E K I +TV+A+D G PQLSD ++ I + D+NDN P+
Sbjct: 93 GSIRVSRPLDR---ETNKTITLTVLAKDQGIPQLSDQASVVIYLTDVNDNAPVI 143
>gi|47207212|emb|CAF91491.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 383 DRERESEYNITVSCSDEGAPSLSSSVTLTLQISDVNDNAPVFERSSY 429
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + A D G P++S + ITV D NDN P+F + Y
Sbjct: 173 DREKQEQISLVLTAVDGGEPRMSGTMLILITVLDANDNAPVFTQSTY 219
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS +++I ++D NDN P
Sbjct: 486 VHAVRSFDYEQIKDFHFLVRAQDGGSPPLSSNVSVRILIQDQNDNPP 532
>gi|344243496|gb|EGV99599.1| Protocadherin Fat 3 [Cricetulus griseus]
Length = 2774
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + L ALD
Sbjct: 2035 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVLEALDY------------ 2080
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + ++NDN P F + Y
Sbjct: 2081 -------------ETCKRFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVY 2125
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N + Y+I++ F ID +G++ T LD
Sbjct: 1086 LQLVSTDADS-GNNKLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 1133
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P +S + I + D+NDN P+F+++ Y
Sbjct: 1134 --------------ELVQHCTLKVTATDNGFPSMSSEVLVHIYISDVNDNPPVFNQLIY 1178
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 2144 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 2185
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 2186 ----------ERVSGYSLLIQAVDSGIPSMSSTTTVNIDISDVNDNSPVFTPANY 2230
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ +LD
Sbjct: 575 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIASLDH------------ 620
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 621 -------------EAIAHFHFHVHVRDSGSPQLTAESPVEVNIEVIDVNDNPPVFTQAVF 667
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID I+ T ER
Sbjct: 1295 IHVPATDGDPGTYG-QISYSIINDFA-KDRFLIDSNGQIITT---------ER------- 1336
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 1337 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 1384
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID +G++ LDR E++ I+V A D
Sbjct: 1957 FSIDSSSGVIILERPLDR-------------------------EQQSSYNISVRATDQSP 1991
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS ++ ITV DINDN P+F+R Y
Sbjct: 1992 RQSLSSLASVTITVLDINDNPPVFERRDY 2020
>gi|50927222|gb|AAH79761.1| Unknown (protein for MGC:86208) [Xenopus laevis]
Length = 1050
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D SN + Y I+ P R FSI+ ++G ++ LDR+
Sbjct: 523 MEVSATDADSGSNA-QLHYSILPDPSARGVFSINPDSGQIRVNMVLDRE----------- 570
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++E Y V+A D G P L ++ ITV D NDN+P F
Sbjct: 571 ---------------QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKF 609
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E KE I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 462 DYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQ 505
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG + Y +I P + F + A D+D E++ ++ I
Sbjct: 189 ATDRDSGVNGVS-SYELIVGPEAQDLFGLQ---------VAEDQD--EKQPQL-----IV 231
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E+ +T+ +D GTP + + ++I++ D NDN P F+++ Y
Sbjct: 232 MGKLDR---EQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKLAY 282
>gi|441619416|ref|XP_003257906.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Nomascus
leucogenys]
Length = 2917
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ T
Sbjct: 1808 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAMLDY-------ELTST 1858
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 1859 YSLIVQATDK------------------GIPRLSNTTIIKVQVTDINDNAPAF 1893
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T LD
Sbjct: 1186 HITAHDPDEGRNGKVTYSILSG-NENMAFMLDESSGLLTTTCPLDY-------------- 1230
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1231 -----------EMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLY 1275
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + ++DR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2164 VLLHSMDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2216
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N +Q+ I+ PG + F I+ +TG V T LDR
Sbjct: 1291 RVEALDRDSGVNS-KLQFEIM--PGASFESFQINSDTGEVVTTTILDR------------ 1335
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V+ D G P LS T+ TVED ND+ P F Y
Sbjct: 1336 -------------EIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSY 1380
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 29/134 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE---KEIY 58
++ A D+D NG + + + + F ++ TG T+Y + D +
Sbjct: 714 KITAIDIDSGKNGQLLYFLL----SDGKFFKMNPNTGPAGTIYVISWADGAAAFSGTDFA 769
Query: 59 ITTD-------------------IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
++D I ALDR E +TV+ D G+P + +
Sbjct: 770 FSSDELQAFVLKFLFCGLGEGELINWVALDR---EHRGHHQMTVLVTDRGSPPRNATMAV 826
Query: 100 KITVEDINDNEPMF 113
++V DINDN P F
Sbjct: 827 YVSVTDINDNRPFF 840
>gi|33317688|gb|AAQ04772.1| putative protocadherinX [Pan troglodytes]
gi|37813461|gb|AAR04488.1| protocadherin X precursor short isoform [Pan paniscus]
Length = 1025
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|301629664|ref|XP_002943957.1| PREDICTED: protocadherin-16-like, partial [Xenopus (Silurana)
tropicalis]
Length = 571
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG ++Y ++ P F+I+ +TG++ T LD
Sbjct: 468 LQVTARDRDQGVNG-EVRYSLLPTP----WFNINPDTGVITTAAPLDY------------ 510
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E ITV+A D G P LS ++I + D+NDNEP+F Y
Sbjct: 511 -------------EQEPHPKITVVASDQGQPSLSSTALVRIHLLDVNDNEPIFSSPVY 555
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E++ Y + V+A D GTP L + + V D+NDN P+FDR +Y
Sbjct: 406 LDRE----ERDSYRLRVLATDAGTPPLRAESSFVLEVTDVNDNPPVFDRQEY 453
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 23/102 (22%)
Query: 32 SIDKETGIVKTL-YALDRDDPER--------------EKEIYITTDIRVQALDRDDPERE 76
++D ++G++ T Y + DP + E E+ +++DI D E +
Sbjct: 143 AMDSDSGVLSTQGYLIRSGDPLQKFRLETRRVSNGVLEVELVVSSDI--------DRENQ 194
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G+P S + I + DIND+ P+F++ +Y
Sbjct: 195 SSYSLVLEAYDGGSPTRSSQMRLDIVILDINDHAPVFNQSRY 236
>gi|440908658|gb|ELR58654.1| Cadherin-related family member 2 [Bos grunniens mutus]
Length = 1304
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ +P FS+D + GI++ L LDR+
Sbjct: 601 IQAHDND-QPDTNNSLLHFSLLPSPFSH-NFSVDPDKGILRNLGPLDREAI--------- 649
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I ++V D+G P L + ITVEDINDN P+F++ +Y
Sbjct: 650 -----------DPALGGRIVLSVNVSDSGEPALWTTVGVTITVEDINDNLPIFNQSRY 696
>gi|426257897|ref|XP_004022558.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Ovis aries]
Length = 1326
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|47207230|emb|CAF92015.1| unnamed protein product [Tetraodon nigroviridis]
Length = 753
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 395 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSY 441
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
+D P+ EK I + + LDR ERE+EI + + A D G P LS + +TV D+N
Sbjct: 167 KDQPDGEK---IVEMVLQKPLDR---EREEEISLVLTATDGGQPVLSGTAQIHVTVLDVN 220
Query: 108 DNEPMFDRVQY 118
DN P+F + Y
Sbjct: 221 DNAPVFTKPVY 231
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS +++I ++D NDN P
Sbjct: 498 VHAVRSFDYEQIKDFHFLVRAQDGGSPPLSSNVSVRILIQDQNDNPP 544
>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
Length = 3180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P ++Y I + G+ F I+ +G + L LDR
Sbjct: 467 LTVQAYDADSPPFNNQVRYFIKE--GDSDLFKINASSGQISLLRTLDR------------ 512
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E ++++A D G+P L+ + T+KI V+D+NDN P F R Y
Sbjct: 513 -------------EAQDEYTLSLVAMDTGSPPLTGSGTVKIIVQDVNDNSPDFQRQSY 557
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + I A+DNG P LS T+ I V D+NDN P+FD + +
Sbjct: 84 RLDYEETQHYIIVAQAQDNGHPSLSGTVTVYINVIDLNDNAPVFDPMSF 132
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D + I Y + ++ FSID TG + T + ++ Y T
Sbjct: 1095 QVIATDKDKQGSNSIISYSLQQS---SDLFSIDPATGEIVTKFMMN----------YKRT 1141
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ E + V+A DNG P +S C + I V D N+N+P F
Sbjct: 1142 SVNTSP--------ENTYSVIVVATDNGKPPMSSECLVTINVVDANNNKPKF 1185
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD NG ++Y I E FSI ++TGIV+ L+
Sbjct: 359 LQVSATDVDEGING-RVRYSIASG-DENRDFSISEDTGIVRVAKNLNF------------ 404
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLS-DACTMKITVEDINDNEPMF 113
ER+ +++ AED G + D + I+++DINDN P F
Sbjct: 405 -------------ERKSRYILSIKAEDCGKDDIRFDTAELSISIQDINDNPPTF 445
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 30/117 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+++ A D D NG I YR++ E F+ID ++G + T ALDR+ P E
Sbjct: 890 IKIEAHDDDSNENG-RISYRLVNDYEE--TFAIDSDSGEIFTNIALDRESIPFYE----- 941
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
I V A D+G PQL T+ ++V D NDN P F R+
Sbjct: 942 ---------------------ILVEAVDHGIPQLVGTSTVLVSVLDKNDNPPRFTRL 977
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 30/108 (27%)
Query: 13 NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72
N I+Y ++ ER F ID TG+V T LDR+ E E+Y
Sbjct: 583 NNAKIRYSLLGDKSER--FRIDPVTGVVYTNATLDRE----EWEVY-------------- 622
Query: 73 PEREKEIYITVIAEDNGT--PQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ ++A+D+ T P+ + A + I VED NDN P F + Y
Sbjct: 623 -------YLIIMAQDSSTTDPRTATA-NLTIIVEDENDNTPTFPQSLY 662
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D NG ++Y I E +F +D TG + L +LD D EI
Sbjct: 1310 LSLDAKDEDEGPNG-IVRYTITSG-NEEKEFKVDPVTGTISILRSLDYD------EI--- 1358
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E + + A+D G T+ I + DINDN P F++ QY
Sbjct: 1359 ----------------QEYRLNITAKDLGFKPKETTATVTIILTDINDNAPQFNQSQY 1400
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D S + II F ID + G ++ LDR
Sbjct: 1624 IQVKAVDKDVRSQNNQFSFSIIDG-NLNQDFKIDPQGGSIEVARNLDR------------ 1670
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + + A D G P + T+KIT+ DINDN P+ D +
Sbjct: 1671 -------------EKVSTYSLIIGAIDTGVPPETGTATVKITLTDINDNGPVIDTASF 1715
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 26/109 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A D D P NG Y II E + K TG++ T +DR E+ D
Sbjct: 1732 LSANDPDLPPNGAPFTYAIIGGRHEN-YVKVQKHTGVLLTNKRIDR-------ELTPYLD 1783
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I +Q ED+GTP + +++I + D NDN P
Sbjct: 1784 IVIQV------------------EDSGTPVMYSNFSLQIKILDKNDNPP 1814
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNVQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAY 798
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQY 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+ + G + L LD
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINGKNGTISLLGPLD------------- 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 957 ----VQA---------GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDITSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-VGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQALY 2159
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E +++ + + A D G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDR---ETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +++ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VVRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIVNGNMENS-FNINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 68 LDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
DR+ R + + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1161 FDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNX-XIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVFATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I V D NDN P F + +Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKY 2988
>gi|209969726|ref|NP_001129641.1| protocadherin 1 precursor [Xenopus laevis]
gi|15022451|dbj|BAB62263.1| axial protocadherin [Xenopus laevis]
Length = 1016
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D SN + Y I+ P R FSI+ ++G ++ LDR+
Sbjct: 489 MEVSATDADSGSNA-QLHYSILPDPSARGVFSINPDSGQIRVNMVLDRE----------- 536
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++E Y V+A D G P L ++ ITV D NDN+P F
Sbjct: 537 ---------------QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKF 575
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E KE I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 428 DYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQ 471
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG + Y +I P + F + A D+D E++ ++ I
Sbjct: 155 ATDRDSGVNGVS-SYELIVGPEAQDLFGLQ---------VAEDQD--EKQPQL-----IV 197
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E+ +T+ +D GTP + + ++I++ D NDN P F+++ Y
Sbjct: 198 MGKLDR---EQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKLAY 248
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNVQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAY 798
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQY 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+ + G + L LD
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINGKNGTISLLGPLD------------- 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 957 ----VQA---------GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDITSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-VGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITITAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E +++ + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDR---ETKEQFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQALY 2159
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +++ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VVRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIVNGNMENS-FNINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 68 LDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
DR+ R + + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1161 FDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVFATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I V D NDN P F + +Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKY 2988
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNVQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAY 798
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQY 694
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+ + G + L LD
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINGKNGTISLLGPLD------------- 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 957 ----VQA---------GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDITSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-VGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITITAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVIVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPIFAQALY 2159
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E +++ + + A D G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDR---ETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N +++ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASTNA------VVRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIVNGNMENS-FNINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSYYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 68 LDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
DR+ R + + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1161 FDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVFATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I V D NDN P F + +Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGNPSLISETTVTINVVDSNDNAPQFLKSKY 2988
>gi|32330109|gb|AAP79575.1| protocadherinX precursor [Gorilla gorilla]
Length = 1025
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR E++ + V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDR---EKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|47207229|emb|CAF92014.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1045
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TTD LDR ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 182 LTTD---SELDR---ERESEYNITVSCSDEGAPSLSSSVTLTLQISDVNDNAPVFERSSY 235
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E+E+E+ + + A D G PQ+S + +TV D+NDN P+F
Sbjct: 664 DREKEEEMSLLLTAVDGGEPQMSGTVKIFVTVLDVNDNAPVF 705
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS +++I ++D NDN P
Sbjct: 787 VHAVRSFDYEQIKDFHFLVRAQDGGSPPLSSNVSVRILIQDQNDNPP 833
>gi|341896095|gb|EGT52030.1| hypothetical protein CAEBREN_12407 [Caenorhabditis brenneri]
Length = 4597
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N G +++ + GE + SID +TGI+K L +LDR+ E+++Y
Sbjct: 735 FKVTANDFDG-GNNGKVKFSLGNNGGEMSVISIDSKTGIIKLLNSLDRE----EQDVY-- 787
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ +IA D G+P + ++VED+ND+ P
Sbjct: 788 -------------------HFAIIASDEGSPMRISVTNLTMSVEDVNDSAP 819
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D NG I+Y I PG + ++D+ TG EI +
Sbjct: 624 KLQATDEDSGYNG-LIRYTIHDLPGSSHEVLTVDEYTG-----------------EITVA 665
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D+ L + + EI + V A D GTP S TMK+ ++D+N++ P FD Y
Sbjct: 666 SDL---FLLMKEKQEVVEIQLKVSAIDAGTPIKSATKTMKLRIKDVNNHSPQFDEPSY 720
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDP---EREKEIYITVIAEDNGTPQLSDACTMK 100
Y+L + D R +++ + + L P E + +TVIA+D+G P L ++
Sbjct: 3404 YSLKKSDHNR----FVSLNPQTGVLTLAQPLDFESLSVLKLTVIAKDSGVPPLESEAQVE 3459
Query: 101 ITVEDINDNEPMFDRVQY 118
I+V D NDN P F++ +Y
Sbjct: 3460 ISVMDENDNAPKFEKEKY 3477
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 44 YALDRDDPEREKEI-----YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
+ ++R DP+ I YITT ++ LDR+ + E E+++++ D G PQL
Sbjct: 1081 FKIERGDPQSFFRIDLTSGYITTS-GIRRLDREK-QSEHELWVSIC--DGGEPQLCSNVV 1136
Query: 99 MKITVEDINDNEPMF 113
+ + V D NDN P F
Sbjct: 1137 VIVNVLDENDNAPSF 1151
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E+ K+ + VIA+D G P L ++ITV D ND+ P+FD
Sbjct: 2255 DYEKIKKYNMKVIAKDGGRPPLVSEALLEITVIDENDHAPVFD 2297
>gi|392345761|ref|XP_003749358.1| PREDICTED: protocadherin-16-like [Rattus norvegicus]
Length = 674
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSI+ + G++ T ALDR E+ T ++RV +A+D G
Sbjct: 580 FSINPDNGLISTTRALDR-------EVQETVELRV------------------VAQDLGE 614
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + I+V+D+NDNEP+F R Y
Sbjct: 615 PPLSATCLVSISVDDVNDNEPVFRRQVY 642
>gi|332861140|ref|XP_003317591.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Pan
troglodytes]
gi|332861142|ref|XP_003317592.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Pan
troglodytes]
Length = 1054
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 516 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|301608215|ref|XP_002933686.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
tropicalis]
Length = 808
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ L R D ER E I++ A+D GTP LS T+++ + D+NDN P+F++ Y
Sbjct: 405 KLVTLSRMDRERTSEYNISITAKDKGTPSLSSLKTIRVALTDVNDNIPVFEKTHY 459
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER----AKFSIDKETGIVKTLYALDRDDPEREKE 56
+ V+A D D NG I Y +I + + SI+ TG++ L+A D
Sbjct: 474 LHVNALDFDINDNG-FITYSVISTAIQNIPISSHVSINSATGVIYALHAFDY-------- 524
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ +E V+A DNG+P LS T+++ + D NDN P
Sbjct: 525 -----------------EQIREFQFQVMATDNGSPSLSSNSTIRVCIIDKNDNSP 562
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++ I + + A D G+P+ + +KI V D NDN P+F + Y
Sbjct: 203 DREKQNSIELMLTASDGGSPRKTGTALIKIVVYDANDNYPVFSQDTY 249
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+HATD D SN G I Y P F ID +TG + + LD
Sbjct: 264 LQLHATDEDDGSN-GEITYSFSHIPENALHIFRIDSQTGELSKVGELDY----------- 311
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K+ +TV A+D G +L C + I V D NDN P
Sbjct: 312 --------------EVTKKYTLTVEAKDGG--ELVSHCKVSIQVIDANDNAP 347
>gi|426257901|ref|XP_004022560.1| PREDICTED: protocadherin-11 X-linked-like isoform 5 [Ovis aries]
Length = 1334
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG TI+Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TIKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAVVTITVLDTQDNPPVFSQAAY 798
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N I YRII G ++F+I+ TG + T LDR
Sbjct: 2312 LLVNASDADTSTNA-VISYRII---GGNSQFTINPSTGQIITSALLDR------------ 2355
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V++ D G+P LS + ++ +TV D+NDN P F Y
Sbjct: 2356 -------------ETRENYTLVVVSSDAGSPGPLSSSTSVLVTVTDVNDNPPRFQHHPY 2401
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LVLRATDGDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTISSLDRE----EQSFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSVARINVSLLDMNDNSPVFYPVQY 694
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G V L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFTINEKDGHVSLLGPLDVHAGSYQLEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNPPVFDQLSY 1001
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y ++K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSVVKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2194 VHVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDSAFTLSDSGELRVTQ 2248
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + V A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2249 SLDR---ETKEHFVLIVTATDSGSPALTGTGTINVIVDDVNDNVPTFASKLY 2297
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2029 TIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVTVMVLDINDNNPVFAQALY 2087
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ E + FSID TG ++++ LDR
Sbjct: 2618 LTVSATDKDSGPNG-QLDYDIVNGNKEHS-FSIDHATGEIRSIRPLDR------------ 2663
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ + +T+ + D G+P S + + I + D NDN P
Sbjct: 2664 -------------EKVSQYVLTIKSSDKGSPSQSSSVEVIIHILDENDNAP 2701
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHALSGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F ID ETG++ LD E ++ +T
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQIDPETGLITVREPLDF---EARRQYSLT 322
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
VQALDR G P L+ I + D+NDN+P+
Sbjct: 323 ----VQALDR------------------GVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2102 IQVYAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------ 2147
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + D ND P+F+ Y
Sbjct: 2148 -------------EKTPVYSLTVQATDRGSTPRTDTATVSIVLLDSNDFVPIFELSPY 2192
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKE-IYITTD 62
ATD D SNG YRI++ E +F +D TL +P E +++ ++
Sbjct: 159 ATDADIGSNGVDHHSYRIVQG-NEEGRFRLDI------TL------NPSGEGAFLHLVSE 205
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V +D G P+ + +TV+DINDN P+F Y
Sbjct: 206 ---GGLDR---EVTPQYQLLVEVKDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|426396600|ref|XP_004064524.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Gorilla
gorilla gorilla]
Length = 1050
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 516 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|332265748|ref|XP_003281878.1| PREDICTED: protocadherin-11 X-linked-like [Nomascus leucogenys]
Length = 1053
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 516 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 26/102 (25%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I Y I+ E KF ID +TG++ LD ER
Sbjct: 2037 IYYSIVGG-NEHKKFQIDAKTGVLTIAEQLDY-------------------------ERA 2070
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ ++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 2071 RDYFLTIQAIDGGIPPLSNHATVNITVTDSNDNAPIFSEVSY 2112
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q++A D+D NG + Y I + G+R K FSID++TG + LDR+ E Y+
Sbjct: 2128 QIYANDLDSEENG-NVSYYIER--GDRQKQFSIDRKTGQIAVTAPLDRE----EIASYV- 2179
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG P LS + I V D NDN P+F Y
Sbjct: 2180 --------------------LEVHARDNGIPMLSSFVMVNIEVLDANDNPPLFSLPNY 2217
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNG 89
S D +TGI + + YA+ D + +I D V L R D E + + TVIA D G
Sbjct: 1091 SRDNDTGINQQVRYAIQNDTEDSTDLFHIDPDEGVIFLKRSLDHESHESHHFTVIAMDRG 1150
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ++V D+NDN P F++ Y
Sbjct: 1151 VPSLSSTAHVWMSVIDMNDNPPKFEQPSY 1179
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 1606 LKVIAHDKDLGSNG-EVRYSFGSDIGELANVFTVDAYTGWISTLVQLDK----------- 1653
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 1654 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNAPAF 1693
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV +LDR+ K +Y
Sbjct: 1919 KVHATDDDIGINR-KIRYEFIDS--ADGHFLIAADSGIVTLAKSLDRE----TKAMY--- 1968
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +QALD+ GTPQL ++ + V+DINDN P F Y
Sbjct: 1969 NVTIQALDQ------------------GTPQLMGIASLIVNVQDINDNPPEFASKLY 2007
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 1814 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTVGQLDR---ETQAKYSLT 1867
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I V D+NDN P F Y
Sbjct: 1868 AHVQ----DRDKPTWEC------------------SSQLEILVSDLNDNAPKFTMSTY 1903
>gi|47229646|emb|CAG06842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2982
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P NG I YRII G F ID +G+++T +DR+ + E Y+
Sbjct: 289 LTVRATDGDAPVNG-NILYRIINGNGSNDVFEIDSRSGVIRTRGLVDRE----QVEAYM- 342
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D+ D G P+ S T+ I VED NDN P F +Y
Sbjct: 343 --LLVEANDQ--------------GRDPG-PR-SATATVHIVVEDDNDNAPQFSEKRY 382
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID ++G V T LD +D
Sbjct: 712 ISATDEDTGENARITYFMDDSIP----QFDIDPDSGAVTTQMELDYED------------ 755
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 756 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNGPRFLRDHY 798
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +GIV+TL LDR++ +Y
Sbjct: 813 VQVSATDRDSGLNG-RVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDREN----VPVY-- 865
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+QA A D G P L + +T+ D+NDN P+F++
Sbjct: 866 ---NLQAF----------------AVDKGVPALKTPVNIHVTILDVNDNPPVFEK 901
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN + + I+ R +F ID +TG + + LD
Sbjct: 397 LQVTATDEDRGSNA-VVHFSIMSG-NTRGQFYIDAQTGKMDLVSHLDY------------ 442
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E KE + + A+D G P LS+ + + V D+NDN P+F
Sbjct: 443 -------------EANKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIF 483
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A D D G ++Y I R+ F++D G V T+ LDR+ T
Sbjct: 183 LKAVDADE-GEAGRLEYFIEALFDSRSNSLFAVDPANGAVSTVEVLDRE----------T 231
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D V V A D+G P+ + T+ ITV D ND+ P+F++ Y
Sbjct: 232 KDTHV---------------FRVTAVDHGAPRRTAMATLTITVSDTNDHNPVFEQQDY 274
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 83 VIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D G P +S + ++ +TV D+NDN P F + Y
Sbjct: 558 VEARDQGYPVMSSSASISMTVLDVNDNNPEFTQKAY 593
>gi|195325654|gb|ACF95735.1| protocadherin-11 [Mustela putorius furo]
Length = 686
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + + AP E FS+D TGI+ + LDR
Sbjct: 217 KISATDGDSGYNA-EINYLLGVDAPSE---FSLDHHTGILTAVRKLDR------------ 260
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 261 -------------EKQEKYSFTVLAKDNGMPPLITNATVSVTILDQNDNSPIFTHNEY 305
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 131 DHEVPLRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 189
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 190 NDNAPVFTQ 198
>gi|410919675|ref|XP_003973309.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Takifugu rubripes]
Length = 2988
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P NG I YRII + G F ID +G+++T +DR+ + E Y+
Sbjct: 388 LTVRATDGDAPVNG-NILYRIINSNGSNDVFEIDSRSGVIRTKGLVDRE----QVEAYM- 441
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D+ D G P+ S T+ I VED NDN P F +Y
Sbjct: 442 --LLVEANDQ--------------GRDPG-PR-SATATVHIVVEDDNDNAPQFSEKRY 481
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 811 ISATDEDTGENARITYFMDDSIP----QFDIDPDTGAVTTQMELDYED------------ 854
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 855 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHY 897
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 26/115 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +GIV+TL LDR+
Sbjct: 912 VQVSATDRDSALNG-RVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRE----------- 959
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ V +L A D G P L + +T+ D+NDN P+F++
Sbjct: 960 -NVPVYSLQ-------------AFAVDKGVPALKTPVNIHVTILDVNDNPPVFEK 1000
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN + + I+ R +F ID +TG + + LD
Sbjct: 496 LQVTATDQDRGSNA-VVHFSIMSG-NTRGQFYIDAQTGKMDLVSHLDY------------ 541
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E KE + + A+D G P LS+ + + V D+NDN P+F
Sbjct: 542 -------------ETNKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIF 582
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A DVD G ++Y I R+ F++D G V T+ LDR+ T
Sbjct: 282 LKAVDVDE-GEAGRLEYFIEALFDSRSNNLFAVDPANGAVSTVEVLDRE----------T 330
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D V V A D+G P+ + T+ +TV D ND++P F++ Y
Sbjct: 331 KDTHV---------------FRVTAVDHGVPRRTAMATLTVTVGDTNDHDPAFEQQDY 373
>gi|47195087|emb|CAF87206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 490
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 398 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSY 444
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ + I + + A D G PQ++ + ITV D NDN P+F + Y
Sbjct: 188 DREKNEHISLVLTALDGGEPQMTGTMQILITVLDANDNAPVFTQPIY 234
>gi|291407992|ref|XP_002720201.1| PREDICTED: protocadherin 11 X-linked isoform 2 [Oryctolagus
cuniculus]
Length = 1342
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|198412949|ref|XP_002125123.1| PREDICTED: similar to FAT tumor suppressor homolog 4, partial
[Ciona intestinalis]
Length = 1624
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE-KEIYITTDI 63
ATD D P+N + +Y I++ + +D G L+ + + RE +EIY
Sbjct: 39 ATDRDSPANSVSAKYSIVEGDTNKFGLLVDSSPGQETLLFLVTKTKFNREIQEIY----- 93
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + A D+GTP LS ++ I + D NDNEP+FD +Y
Sbjct: 94 ----------------HLNISATDDGTPSLSGYLSVTINIIDNNDNEPVFDMSEY 132
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ VHA+D+D +NG + YRI + FS++ +G++ LD EI +
Sbjct: 147 LTVHASDLDKGANGD-VSYRISERSDSNNLFSVNTLSGVITLRGQLDY-------EIATS 198
Query: 61 TDIRVQALDRDDPEREKEIYITV 83
+ ++A D +PE ++T+
Sbjct: 199 HRLSLEAFDGGEPELFGRAFVTI 221
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 52 EREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNE 110
ER I +D R LDR+ KEI+ +T+ D TP LS C ++I + D+NDN
Sbjct: 1171 ERTTGRLIVSDGRY--LDRE----VKEIHTLTIQVWDTPTPTLSSECLVEIQLTDVNDNP 1224
Query: 111 PMF 113
P+F
Sbjct: 1225 PVF 1227
>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
Length = 1376
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 31 FSIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+ K+TGI + Y++ + R+ I+ T + A D D ER K+ ++T+ A D G
Sbjct: 665 LATSKDTGINAEITYSIIGGNEHRKFGIHNRTGVLSLA-DTLDYERAKDYFLTIQAVDGG 723
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
TP LS+ T+ I+V D NDN P F + Y
Sbjct: 724 TPPLSNLATVNISVTDSNDNHPQFTQNSY 752
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y + + R F I E+GIV LDR+
Sbjct: 559 KIHATDADIGINR-KIKYAFLDS--YRDHFRIAPESGIVTLAKPLDRE------------ 603
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+K +Y ++V A D G P LS+A T+ + V+DINDN P F Y
Sbjct: 604 --------------QKALYNLSVSATDLGHPALSNAATLVVNVQDINDNPPEFTSKHY 647
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
M++ A D D SNG I+Y + G+ F +D TG + TL ALD+
Sbjct: 246 MKLTARDADSGSNG-DIRYALSPDVGDIVNIFDVDAYTGWITTLVALDK----------- 293
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ V+A DNG P+ + T+ + ++D ND P+F QY
Sbjct: 294 --------------EKREDYKFQVLATDNGQPKHTTRSTVIVRLKDYNDCPPVFREGQY 338
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y I + G+R +F+I+++TG V LDR
Sbjct: 767 LQVRANDLDAEENG-RVSYTIER--GDRMEQFAIEEDTGYVAVAGTLDR----------- 812
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P L+ + I + D NDN P+F + Y
Sbjct: 813 --------------ESISNYVLEVQARDHGVPTLTAYVLVNIEISDANDNPPVFTQQNY 857
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D P+N + R F++DK+TG +KT LDR+ R
Sbjct: 454 LQVLANDMDEPANS---RLRFYLTGNGAEDFNLDKDTGHLKTARKLDRETQSRYS----- 505
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ DRD P E + +++ + D+NDN P F Y
Sbjct: 506 --LMAHVQDRDHPGWEC------------------SSQIELALTDLNDNAPEFSMNPY 543
>gi|301608225|ref|XP_002933691.1| PREDICTED: protocadherin gamma-B7-like, partial [Xenopus (Silurana)
tropicalis]
Length = 503
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E IT+ AED G+PQL+++ T+++ + D+NDN P+FD++ Y
Sbjct: 414 DREKTSEYNITIKAEDKGSPQLTNSKTIRLILTDVNDNAPVFDKMDY 460
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E++ + + A D GTP + ++I V DINDN P+F++ Y
Sbjct: 201 KTLDR---EKKNSSVLILSAFDGGTPSKTGTSLIRIVVTDINDNYPLFNKDTY 250
>gi|291407998|ref|XP_002720204.1| PREDICTED: protocadherin 11 X-linked isoform 5 [Oryctolagus
cuniculus]
Length = 1320
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|431918261|gb|ELK17488.1| Protocadherin-23 [Pteropus alecto]
Length = 3338
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E G++ T LDR E ++ + + V+A+D G
Sbjct: 595 FTIDPERGLISTTRRLDR-------------------------EVQEMVELRVVAQDLGE 629
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS C + ITV+D+NDNEP+F R Y
Sbjct: 630 PPLSATCLVSITVDDMNDNEPIFQRQVY 657
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T +LD +
Sbjct: 1631 HVTAQDPDEGRNGRVTYSILSG-NENMAFMLDESSGLLTTTCSLD-------------YE 1676
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ Q + +T+ A D+G P LS + T+ ITV D+ND P F + Y
Sbjct: 1677 IKTQHI------------LTLQALDSGIPALSSSQTLTITVLDVNDETPAFKQHLY 1720
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + LDR+ K + ++A D+G P LS + I V D+NDN P F+ V+Y
Sbjct: 2610 VLLHNLDRETSASHK---LVILASDHGCPPLSSTAIVSIEVLDVNDNPPKFNTVKY 2662
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +N +Q+ I+ R F I+ +TG+V T LDR+ +E++I
Sbjct: 1736 RVEAVDRDSGTNS-KLQFEIMPGASFRL-FEINPDTGVVVTTATLDRE----VQEVFI-- 1787
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ V D G P LS T+ TVED ND+ P
Sbjct: 1788 -------------------LRVRVRDGGVPSLSGTTTILCTVEDENDHAP 1818
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ A F ID +G + LD E +
Sbjct: 2254 VQVFATDLDSGLNG-LIEYSILSGNQGEA-FHIDALSGEITADGILDY-------EHICS 2304
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS +KI V D+NDN P F
Sbjct: 2305 YSLIVQATDK------------------GMPRLSGTTVVKIQVTDVNDNAPTF 2339
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 32/122 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRI---IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+QV A+D D NG I+Y + ++ G F ID R+ +I
Sbjct: 672 LQVKASDADAGLNG-LIEYSLYDGFQSYGAPQAFQIDP-----------------RDGQI 713
Query: 58 YITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
++ DI D E++ + Y + V A D G LS +++ +ED+NDNEP+F+
Sbjct: 714 CVSQDI--------DREKDPDTYDLLVKARDGGG--LSAQAFVRVELEDVNDNEPVFNPS 763
Query: 117 QY 118
Y
Sbjct: 764 TY 765
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D+D +NG ++Y II GE F+I++ +G + T +ALDR
Sbjct: 1841 VLASDMDAGTNGA-VEYHIIDGNTGEY--FAINETSGELSTTHALDR------------- 1884
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + ++ D G P S +++ V D ND+ P F + Y
Sbjct: 1885 ------------EQVNSFALVILCSDLGDPPRSSIVQLQVRVLDDNDHSPFFPVLHY 1929
>gi|380012864|ref|XP_003690494.1| PREDICTED: protein dachsous-like, partial [Apis florea]
Length = 567
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N I+Y ++ + F ID+ +G++ T +D
Sbjct: 464 LKVTATDLDEGANSA-IKYSLLNS----TWFIIDETSGLISTQTHVDC------------ 506
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 507 -------------EADPAPILVVVATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLY 551
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
R+ IY+ R LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P
Sbjct: 389 RDNIIYLVVVER--PLDRE----EKPVYDLSVEATDAGTPPLRAVRTFRLIVTDVNDNAP 442
Query: 112 MFDRVQY 118
F R +Y
Sbjct: 443 KFARDRY 449
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + A D G P L + +TV+D+NDN P+F++ +Y
Sbjct: 208 SLDR---EARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRY 256
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 26/91 (28%)
Query: 22 IKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ P +R + F ID ETG+V ALD + ER +
Sbjct: 266 VGTPSDREEMFRIDPETGMVYVNKALDFESKERHE------------------------- 300
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 301 LVIVARDRGAQPLEASAFLSVRVTDVNDNQP 331
>gi|440905275|gb|ELR55675.1| Protocadherin-11 X-linked, partial [Bos grunniens mutus]
Length = 1008
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 519 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 562
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 563 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPIFTHNEY 607
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE EK + I + LDR+ EK+ Y+ V ED G PQ S
Sbjct: 214 QNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTYVMKVKVEDGGFPQRSSTAI 266
Query: 99 MKITVEDINDNEPMF 113
++++V D NDN P+F
Sbjct: 267 LQVSVADTNDNHPVF 281
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 433 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 491
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 492 NDNAPVF 498
>gi|291407990|ref|XP_002720200.1| PREDICTED: protocadherin 11 X-linked isoform 1 [Oryctolagus
cuniculus]
Length = 1350
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|291408000|ref|XP_002720205.1| PREDICTED: protocadherin 11 X-linked isoform 6 [Oryctolagus
cuniculus]
Length = 1301
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|291407994|ref|XP_002720202.1| PREDICTED: protocadherin 11 X-linked isoform 3 [Oryctolagus
cuniculus]
Length = 1340
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|326673644|ref|XP_002664482.2| PREDICTED: protocadherin-11 X-linked [Danio rerio]
Length = 1098
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D SN I Y + P F+ID +GI+ + LDR
Sbjct: 486 IKISATDADSGSNA-LIIYSL--GPDAPDGFNIDSRSGILSVVKRLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TVIA DNGT L T+K+ V+D NDN P F +Y
Sbjct: 531 -------------EKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEY 575
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q+LDR E + + + ED G P S +++TV D+NDN P+F
Sbjct: 205 QSLDR---ETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVF 249
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R K ++ ++ D E +E I ++A D+G P L+ + + I ++D
Sbjct: 401 DHDVPFRLKPVF-NDQFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNVPVF 466
>gi|426367248|ref|XP_004050645.1| PREDICTED: protocadherin-16 [Gorilla gorilla gorilla]
Length = 3298
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 493 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 538
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 539 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 583
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1669 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1712 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1751
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR ER E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1604 VRPLDR---ERRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1654
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1126 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1171
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1172 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1211
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2191 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2242
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2243 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2275
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 429 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 477
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1772 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1815
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1816 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1855
>gi|73490260|dbj|BAB61903.2| KIAA1773 protein [Homo sapiens]
Length = 3434
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 629 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 674
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 675 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 719
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1805 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1847
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1848 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1887
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1262 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1307
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1308 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1347
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1740 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1790
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2327 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2378
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2379 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2411
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 565 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 613
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1908 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1951
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1952 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1991
>gi|301608221|ref|XP_002933689.1| PREDICTED: protocadherin gamma-B7-like [Xenopus (Silurana)
tropicalis]
Length = 816
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E IT+ AED G+PQL+++ T+++ + D+NDN P+FD++ Y
Sbjct: 411 DREKTPEYNITIKAEDKGSPQLTNSKTIQLILTDVNDNAPVFDQINY 457
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE----RAKFSIDKETGIVKTLYALDRDDPEREKE 56
+VHATD D NG I Y I+ E + SI+ +G+ LYA +R
Sbjct: 472 FRVHATDPDINENGKVI-YMILTNNIEDIPISSYISINTVSGV---LYA------QRSF- 520
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +E YI V+A+D+G+P S T+KI + D NDN P
Sbjct: 521 ---------------DYEKLREFYIQVMAKDSGSPSRSANATVKICITDQNDNAP 560
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++ + + A D GTP + +KI + D+NDN P+F++ Y
Sbjct: 201 DREKKNSSVLILSAFDGGTPSKTGTSLIKIAIIDVNDNHPLFNKDTY 247
>gi|16933557|ref|NP_003728.1| protocadherin-16 precursor [Homo sapiens]
gi|20139065|sp|Q96JQ0.1|PCD16_HUMAN RecName: Full=Protocadherin-16; AltName: Full=Cadherin-19; AltName:
Full=Cadherin-25; AltName: Full=Fibroblast cadherin-1;
AltName: Full=Protein dachsous homolog 1; Flags:
Precursor
gi|119589089|gb|EAW68683.1| dachsous 1 (Drosophila) [Homo sapiens]
gi|168275540|dbj|BAG10490.1| protocadherin-16 precursor [synthetic construct]
Length = 3298
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 493 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 538
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 539 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 583
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1669 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1712 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1751
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1126 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1171
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1172 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1211
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1604 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1654
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2191 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2242
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2243 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2275
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 429 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 477
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1772 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1815
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1816 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1855
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2386 VNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2425
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -----------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + Y+ + P+ E DR+ R + + TV+A D
Sbjct: 1124 AVDKDFGPNGEVRYSFEMMQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVVATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|291407996|ref|XP_002720203.1| PREDICTED: protocadherin 11 X-linked isoform 4 [Oryctolagus
cuniculus]
Length = 1332
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADSGRNA-EINYLLGTDAPPE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ Y TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
Length = 3295
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG + FSID +GI+ T +LD
Sbjct: 490 VRVTAQDPDQGTNG-QVTYSL--APGAHTRWFSIDPTSGIITTAASLDY----------- 535
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F + Y
Sbjct: 536 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQKTFY 580
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG + Y + FS+D +TG++ TL ALDR
Sbjct: 1666 LTLRATDPDLGANG-QVTYGGVSC----ESFSLDPDTGVLTTLRALDR------------ 1708
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++TVED ND+ P F
Sbjct: 1709 -------------EEQEEISLTVYARDMGSPPLLTHVTVRVTVEDENDHAPTF 1748
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1123 RILATDRDLGPNG-RLTYSLRQLSEDSKAFRIQPQTGEVTTLQTLDR------------- 1168
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1169 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTF 1208
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + I+V D+ND P F + +Y
Sbjct: 1601 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQLLTISVADVNDEAPAFPQQEY 1651
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2188 LQVEADDLDQGS-GGQISYSLAASQPARGLFQVDPATGTITTTAILDR-------EIWAE 2239
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2240 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2272
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +T+ D+NDN P+F + Y
Sbjct: 2558 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASY 2604
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1769 LRASDPDVGANG-QLQYRILDGDPAGA-FVLDPASGEFGTMRPLDR-------------- 1812
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1813 -----------EVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAF 1852
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P+FD Y
Sbjct: 426 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPVFDHQLY 474
>gi|198421140|ref|XP_002120840.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
Length = 2746
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D + I YRII TG + L+ + E+ +
Sbjct: 1780 INVTATDADYSRDNNVIMYRIISG-----------NTGGAFKIRTLNGPGKQTLGELCVA 1828
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D LDR+ +R ++ V A D GTP LS T+ I V D+NDN P F++ Y
Sbjct: 1829 GD-----LDRETTDR---YFLIVAAIDQGTPSLSSNATVVINVRDVNDNRPRFNKTSY 1878
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D NG + Y + + E F ID G++ LDR
Sbjct: 910 RVTALDEDSGENG-IVTYEL-QPSSETEAFLIDPTNGVITLTMELDR------------- 954
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + +TV A+DN P L D CT+ +T+ DINDN P F
Sbjct: 955 ------------ENKSSYRLTVFAQDNSFPVLYDWCTVVVTLIDINDNTPQF 994
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V ATD D +NG ++Y I + F ++ TG +KT LDR+ E YI
Sbjct: 1462 MPVLATDADSENNGW-VRY-FISSGNLDNSFELEPVTGYLKTRLKLDREVHEH----YI- 1514
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V A+D+ D R + +CT+ I V DIND+ P +
Sbjct: 1515 --LHVNAMDQGDTVRR-----------------TGSCTVSIQVVDINDHSPTLN 1549
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V+A DNG P S + + ITV D NDN+P F Y
Sbjct: 1064 RLDRESTSSYQLQVVASDNGEPVRSASGLIDITVLDWNDNDPQFTETAY 1112
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD+D NG I YR+ + F ID +TG IT
Sbjct: 1673 ITVEATDLDSGENG-RITYRLDNVLPNKPIFVIDPDTG-------------------EIT 1712
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + +AL+ EI A D+G P + ++++ + D+N+N P F R QY
Sbjct: 1713 TN-KSEALNPQSSVFNLEIE----AFDHGVPPRVQSVSVRVQITDVNNNPPTFSRSQY 1765
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG ++Y I+ + F+ID TGI+ T LD
Sbjct: 312 LQVTARDKDQGPNG-EVRYSILHGRDTHSSWFTIDPATGIITTAAPLDY----------- 359
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + +TV+A D GTP LS + + + ++D+NDNEP+F
Sbjct: 360 --------------EKDPQPQLTVLATDRGTPALSSSAVVHVALQDVNDNEPVF 399
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG + Y I ++ + ID +TG + T LDR EI+
Sbjct: 1974 IQVLADDLDQGVNG-QVTYAINQSLPMPGLYHIDPQTGTITTAAILDR-------EIWSQ 2025
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A+DR GTP L + T+ + V DINDN P
Sbjct: 2026 TRLVVTAMDR------------------GTPPLMGSATLTVVVMDINDNSP 2058
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D NG ++YR+ PG+ FS+D +G++ T +ALDR
Sbjct: 1581 LRATDPDGGENG-RLEYRVAGGDPGQ--DFSLDPVSGVLSTAHALDR------------- 1624
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + V+ +D+G+P S ++ + V D+NDN P F + Y
Sbjct: 1625 ------------EQIASYSLIVVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQASY 1669
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A D G PQ S + ITV+D+NDN P+F R +Y
Sbjct: 2348 LTVAASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEY 2385
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E++ Y + V A D+GTP L + V D+NDN P+FD+ +Y
Sbjct: 248 QLLDRE----ERDSYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEY 297
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V AL+R++ + +TV+A D+G P+LS + + V D+ND P+F++ +Y
Sbjct: 1413 VGALNREEVAQHN---LTVVATDHGFPRLSATQLLSVLVLDVNDEAPVFEKPEY 1463
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D N + YR+++ F I +TG V T ++LDR
Sbjct: 948 RVTASDRDAGQNS-RLTYRLLQ---HDPNFLIHTQTGEVSTKHSLDR------------- 990
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + VI +D G P S T+ +TV D NDN P F
Sbjct: 991 ------------EQQSNFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAF 1030
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + A D G+P S T+ ++++DINDN P F++ +Y
Sbjct: 34 DRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFNQSRY 80
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D+G PQLS T+ + V+ +DN P+FD + Y
Sbjct: 786 LAIVARDSGIPQLSSTFTLLVHVQAEDDNGPIFDTLTY 823
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG + P FSI +TG++ T ALDR++ E+
Sbjct: 1478 LQVLATDRDLGANGQVSYGGLSGGP-----FSIHPQTGLIVTTRALDREEQEQH------ 1526
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+TV A D G P T+ +TV D ND+ P +
Sbjct: 1527 -------------------VLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLE 1561
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGG-TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D + G + +FSIDK +G + T+ LDRD+
Sbjct: 419 LQVTATDSDSGAFGSLSYSIGSGIGSIIPTQFSIDKHSGQLCTVQPLDRDEG-------- 470
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D T+IA D G L+ +K+ +ED NDN P+F ++Y
Sbjct: 471 -----TSAYD-----------FTIIAVDGGG--LNSMVYVKVFLEDTNDNRPVFYPLEY 511
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG +QY I + + F+ID TGI+ T LD
Sbjct: 468 LQVTARDKDQGPNG-EVQYSIKHSQDTHSSWFAIDPATGIITTAAPLDY----------- 515
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + +TV+A D GTP LS + + + ++D+NDNEP+F
Sbjct: 516 --------------EKDPQPQLTVLATDRGTPALSSSAVVLVALQDVNDNEPVF 555
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D NG + Y I ++ + ID +TG + T LDR EI+
Sbjct: 1892 IQVLADDLDQGMNG-QVTYAINQSLPMTGLYHIDPQTGTITTAAILDR-------EIWSQ 1943
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + V A+DR GTP L + T+ + V DINDN P
Sbjct: 1944 TRLVVTAMDR------------------GTPPLVGSATLTVVVMDINDNSP 1976
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D NG ++YR+ E+ F +D +G++ T ALDR
Sbjct: 1465 LRATDPDGDENG-RLEYRVADGDPEQ-DFILDPVSGVLSTARALDR-------------- 1508
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV+ +D+GTP S ++ + V D+NDN P F + Y
Sbjct: 1509 -----------EQVAFYSLTVVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASY 1553
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A D G PQ S + ITV+D+NDN P+F R +Y
Sbjct: 2266 LTVAALDRGLPQRSTTVPVLITVQDVNDNPPVFARAEY 2303
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E++ Y + V A D+GTP L T + V DINDN P+FD+ +Y
Sbjct: 404 QLLDRE----ERDSYDLRVTATDSGTPPLRAESTFVLQVIDINDNPPLFDQQEY 453
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 36/144 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A D D NG TI Y + A ER F++ TG ++T L R D R + ++ T
Sbjct: 1212 LQAKDPDEGENG-TITYSLTGAWAER--FTLHTATGELRTATVLRRSD--RAEYVFTVTA 1266
Query: 63 -------------IRVQ---------------ALDRDDPEREKEIYITVIAEDNGTPQLS 94
+RVQ AL+R++ + +TV+A D+G P+ S
Sbjct: 1267 SDRGMVPCSTSAIVRVQTWTVRPVLGALSVVRALNREEVVQHN---LTVVAADHGFPRRS 1323
Query: 95 DACTMKITVEDINDNEPMFDRVQY 118
+ I V D+ND P F++ +Y
Sbjct: 1324 ATQLLSILVLDVNDEAPTFEKPEY 1347
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + A D G+P S T+ ++V+DINDN P F++ +Y
Sbjct: 190 DRENRSSYSLVLEAYDGGSPPRSSQMTLDVSVQDINDNAPTFNQSRY 236
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG + P FSI +TG++ T + LDR++ E+
Sbjct: 1362 LQVLATDRDLGANGQVTYGGLSGGP-----FSIHPQTGLIVTTHPLDREEQEQH------ 1410
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V A D G P T++ITV D ND+ P +
Sbjct: 1411 -------------------VLMVYARDGGLPPNLSKATVRITVGDENDHTPQLE 1445
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D GT+ Y + G +F IDK TG + T LDRD+ +
Sbjct: 575 LQVTATDADS-GLFGTLSYSLGSGIGSVVPTQFGIDKHTGHLCTAQPLDRDEGTSAYDFT 633
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT A D G L+ +K+ +EDINDN P+F ++Y
Sbjct: 634 IT------------------------AVDGGG--LNSMVYVKVFLEDINDNRPVFYPLEY 667
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D+G PQLS T+ + V+ +DN P+FD + Y
Sbjct: 942 LAIVARDSGVPQLSSTFTLLVHVQAEHDNGPIFDTLTY 979
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D N + YR+++ + F I +TG + T ++LDR
Sbjct: 1104 RVMASDRDAGQNS-RLTYRLLQ---HDSNFLIHTQTGELSTKHSLDR------------- 1146
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + VI +D G P S T+ +TV D NDN P F
Sbjct: 1147 ------------EQQSSYQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAF 1186
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IR D + P E + V A D+G+P LS T+++ V D+ND+ P+F Y
Sbjct: 2136 IRPVEFDANQPTLE----LVVEARDHGSPSLSSWATVQLQVLDVNDHSPIFQVPHY 2187
>gi|198433098|ref|XP_002120736.1| PREDICTED: similar to FAT tumor suppressor 1 [Ciona intestinalis]
Length = 4828
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 27/114 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ A+D+D N I Y + A G KF+I+K TG +K + +LDR+D K
Sbjct: 769 NIWASDLDEGRNAN-ISYSLSSAVGGN-KFAINKTTGFIKVMESLDREDVSEYK------ 820
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+TVIA+D G LS + ++ I V D+NDN P F +
Sbjct: 821 -------------------LTVIAKDAGEHPLSSSASVLIHVADVNDNPPRFHQ 855
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D N G+I Y ++ P E F ID G + T LD D + +
Sbjct: 411 IQVHAEDRDA-GNNGSILYTLVGNPSE---FKIDPINGTILTTKKLDYD------LMRSS 460
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RV+A D P K C +K+TV ++NDN PMF
Sbjct: 461 YKLRVRATDSGTPFTRKS-----------------ECFVKVTVSNVNDNAPMF 496
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 31/120 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER---AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+V ATD D + G++ Y I+ PG + F ID ETG++ T LD
Sbjct: 2269 KVEATDADSGA-FGSLSYTIL--PGSEDVGSLFLIDLETGVIWTASNLD----------- 2314
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E+ V A D G+P T+++ V D+NDN P+FD+ Y
Sbjct: 2315 --------------AETKSEMEFVVRASDGGSPARYCDVTVRVIVNDVNDNPPIFDQSVY 2360
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A +D +N ++Y I E KF I++++G ++ + +D
Sbjct: 3247 LQVSAHSIDSGANA-KLRYSITHG-NEHGKFVINQDSGEIRLIATVDY------------ 3292
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ +T+ A D + LS CT++I + D+NDN P+F Y
Sbjct: 3293 -------------ESDQSYVLTISAADRSSNPLSSECTVRIAIIDVNDNAPVFTATSY 3337
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 34/122 (27%)
Query: 1 MQVHATDVDPPSNG--GTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKE 56
+QVHA D D NG G Y I +P FSID +TG++++L LDR+ K
Sbjct: 2824 VQVHAVDKD---NGEFGKFTYSIKSSPTNNNTDFFSIDPKTGLIQSLLPLDRE----IKP 2876
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
Y T VQA+D +A +N D ++ I V DIND+ P F
Sbjct: 2877 FYTLT---VQAID--------------LAGNN------DTTSVNINVVDINDSPPEFSGN 2913
Query: 117 QY 118
+Y
Sbjct: 2914 RY 2915
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D NG + Y I G+ F+I+ +TG++ + LDR
Sbjct: 663 KVQAVDRDNGFNG-KLWYTITSGNGDSC-FNINTQTGVISIVKLLDR------------- 707
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER +TV D G+P + + I V D+NDN P+F + ++
Sbjct: 708 ------------ERTSRYNLTVSVSDMGSPTKTAFTKITIIVADVNDNPPVFGQTRF 752
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 32/120 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV +V SN +++ II G R+ F I+ TG++ T LDR+
Sbjct: 306 QVGFVNVTGESNA--VRFSIISGNGRRS-FEINPHTGLITTQRHLDRN------------ 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC---TMKITVEDINDNEPMFDRVQY 118
K IY +A N + L DA T+ I +ED ND++P+F Y
Sbjct: 351 --------------AKAIYTLTVAATNVSLVLGDALNTTTVVIEIEDANDHDPLFTDSTY 396
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 28/106 (26%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D+ P N +I Y I+ G F+ID+ TGI+ T LDR
Sbjct: 992 DIGEPEN--SIGYSIVDGTG-LGIFAIDENTGIITTSRQLDR------------------ 1030
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E E+ ++T+ A D G LS + + V +INDN P+
Sbjct: 1031 -------ETERFYWLTIKATDRGAIPLSGTMFVLVEVGNINDNAPI 1069
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
H+T + P+N +R++ + D + G+ ++ RD+ + I T +
Sbjct: 3130 HSTRENTPTNSSL--HRVV---------AFDPDQGLNGSVTYQLRDNMNNQFSIESKTGV 3178
Query: 64 RV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V + LDR E I +IA D+GT ++S + + + D+NDN P+FD QY
Sbjct: 3179 LVLNKPLDR---ETVPSYQIEIIAIDDGTMRMSTTDILHLQILDVNDNPPIFDLNQY 3232
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 34/115 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + +TD D G + Y++ + +F++D TG ++T ALDR
Sbjct: 3041 LNILSTDADI-GEAGRVSYQLTGTGSD--QFNLDPRTGELRTARALDR------------ 3085
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK--ITVEDINDNEPMF 113
E E +T I+ D G Q C K ITVEDINDN P+F
Sbjct: 3086 -------------EITSEYSLTAISIDGGDKQ----CISKVHITVEDINDNPPIF 3123
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYI 59
+QVHA D+D + TIQYR+ F I+ TGI+ T LDR+
Sbjct: 1090 VQVHAVDLD--GDHDTIQYRM---SVNNTYFKINTSTGIITTKKRKLDRE---------- 1134
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
R+ A D + V+ D G P LS + + + D NDN P F ++
Sbjct: 1135 ----RISAQD---------MRFEVLISDGGEPPLSSFAKVVVELIDENDNPPKFRNIE 1179
>gi|149064852|gb|EDM15003.1| protocadherin 18 (predicted) [Rattus norvegicus]
Length = 1134
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + V DINDN P F R QY
Sbjct: 424 DREKRSEYSLTVIAEDKGTPNLSSVRHFTVQVNDINDNPPRFQRSQY 470
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|201025402|ref|NP_001093994.1| protocadherin-18 precursor [Rattus norvegicus]
gi|197245732|gb|AAI68716.1| Pcdh18 protein [Rattus norvegicus]
Length = 1135
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + V DINDN P F R QY
Sbjct: 424 DREKRSEYSLTVIAEDKGTPNLSSVRHFTVQVNDINDNPPRFQRSQY 470
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|268557990|ref|XP_002636985.1| Hypothetical protein CBG09473 [Caenorhabditis briggsae]
Length = 5775
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 30/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A D D NG I+Y I + F ID+++G++KT LDR+ R
Sbjct: 370 VYAIDEDSGPNG-IIRYSIEGS----EDFIIDEDSGVIKTTKLLDRETTAR--------- 415
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L+ + TM + ++DINDN P+FD+ +Y
Sbjct: 416 ----------------YSLKVTARDMGTPPLNTSTTMTVVLKDINDNAPIFDKKEY 455
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG ++Y + + G + +I+ ++G+++T LDR+ T
Sbjct: 159 LSVFARDLDSEENG-EVEYSLGEGNG-KNLLAINSKSGVIQTAAPLDRE----------T 206
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I + VIA D G P+ ++ITV D+NDN P+F Y
Sbjct: 207 LSL---------------IRLDVIASDKGIPKKESKALVEITVLDVNDNAPVFASDSY 249
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D +N I YRII G ++F+I+ TG + T LDR
Sbjct: 2386 VNASDADASTNA-VISYRII---GGNSQFTINPSTGQIITSALLDR-------------- 2427
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2428 -----------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2473
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3612
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y I+K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIVKGNEER-QFAIDSTSGQVALIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3473
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3474 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3512
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2690 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2736 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2778
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALY 2159
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + Y+ + P+ E DR+ R++ + TV+A D
Sbjct: 1124 AVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRQRGTAVFSFTVVATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|194680340|ref|XP_581926.4| PREDICTED: protocadherin-11 X-linked [Bos taurus]
gi|297492723|ref|XP_002699811.1| PREDICTED: protocadherin-11 X-linked isoform 4 [Bos taurus]
gi|296471046|tpg|DAA13161.1| TPA: protocadherin 11 Y-linked isoform 4 [Bos taurus]
Length = 1022
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|348537988|ref|XP_003456474.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2929
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I+ G + F ID +TG++ T + DR
Sbjct: 777 LRVQAHDADMGVNG-EVKYGIMNRDGVASGFDIDPDTGVITTAVSFDR------------ 823
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ++V A D L C + + + D NDN+P F+ +Y
Sbjct: 824 -------------ERQREYTLSVTATDQAEEPLIGICQITVQISDQNDNDPKFENSRY 868
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 19/118 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D +G I Y I+K G+ FSID +GI+ T + DR+ +K Y+
Sbjct: 1096 QVSATDLDSGLHG-MIHYVILKDESGDSQFFSIDSHSGIIFTRASFDRE----QKASYL- 1149
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R+ + G P +D ++I V D+NDN P F + Y
Sbjct: 1150 --IEVQSQDGSESARQGQ---------QGQPN-TDTAYVRIFVTDVNDNAPAFAQPVY 1195
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A+D+D NG Y I K +F +D ++G V +LDR+ + +
Sbjct: 1646 QVTASDLDSGQNG-RFSYSISKESDPYNQFLVD-QSGWVVVADSLDREKISQHR------ 1697
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
I ++A D G+P L+ + +TV D+NDN P F+
Sbjct: 1698 -------------------IMILATDAGSPPLTGTAIVVVTVLDVNDNGPEFE 1731
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 32/112 (28%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D +N G R++ + F++ TD
Sbjct: 1757 LHATDRDTSTNSGPFSIRLLMLTSDATNFNL---------------------------TD 1789
Query: 63 IR-----VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
R + AL D ER+KE + ++ D+G+P +S T+ + + D ND+
Sbjct: 1790 FRNGSAAITALRAFDRERQKEYRLPILMIDSGSPPMSSTSTLTVVIGDRNDH 1841
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D ++ ++Y + G +F+ID+ TG
Sbjct: 1313 LEVSATDPDQEADQSALRYSL-HGQGAGGEFTIDERTG---------------------- 1349
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R+ A R D E V+A D G L+ + + V DINDN P F
Sbjct: 1350 ---RIYAQRRLDREERPAWRFLVLATDEGGAGLTGFADVLLEVRDINDNAPFF 1399
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
IT+ V R D ER IY V+A D GTP + +++I V + ND P+F +
Sbjct: 592 ITSGGVVSPARRLDYERPNHIYEFLVVAVDAGTPPRTGTASIRIRVANTNDEAPVFSQNV 651
Query: 118 Y 118
Y
Sbjct: 652 Y 652
>gi|336244953|gb|AEI28394.1| FAT tumor suppressor-like protein 4, partial [Ichthyophis
bannanicus]
Length = 254
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
M HA VDP G I Y + + P R F+I++ G V +D + + EI
Sbjct: 122 MVFHARAVDPDEGVNGMILYSLKQNP--RGLFAINENNGSVSLTGPVDINAGYYQVEI-- 177
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQ S +C + ++V D+NDN P+FD++ Y
Sbjct: 178 ------------------------LASDMGVPQHSSSCILTVSVHDVNDNPPVFDQLSY 212
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N I+Y + + F ID+ +G++ T +D
Sbjct: 462 LKVTATDLDEGANSA-IKYSLFNS----TWFVIDETSGLISTRTHVDC------------ 504
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + VIA D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 505 -------------EADPAPILLVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLY 549
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N + YR+ + F I TG IY+
Sbjct: 977 LQVTAVDLDT-GNNARLSYRLQGS----TAFRISPNTGW-----------------IYL- 1013
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ +R +TV+A DNG+P + + ++ +TV D NDN+P F++ Y
Sbjct: 1014 ----AQILDRETLDRHA---LTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFY 1064
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIY----------------ITTDIRVQ 66
PG ++ ++ T ++ T A D D+ + EIY IT + +
Sbjct: 1689 PGSCYTLAVPENQGTSVIHTTAAADLDE-GKNGEIYYSIVGGNIGAKFILDSITGMLSMS 1747
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + +T+ A+D G P L C + + V D+NDN P F + QY
Sbjct: 1748 NLDR---EAVSKYILTISAKDKGRPSLETRCNLTVIVLDVNDNAPSFVQNQY 1796
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYI 59
+++ A+D D N I Y I+ + A F+I +GIV+T LDR+ E+ +
Sbjct: 2204 VKLSASDADQGMNS-RILYHIVDGNPDNA-FTISPPYSGIVRTNIVLDREIREKYR---- 2257
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+IA D G PQL+ + + V DINDN+P F
Sbjct: 2258 ---------------------LTIIATDQGNPQLTGTAALSVRVIDINDNQPTF 2290
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D NG I+Y I + +R + F ID ETG+V ALD + ER +
Sbjct: 244 LAVNATDSDAGDNG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHE---- 298
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 299 ---------------------LVIVARDRGAQPLEASAFLSVRVTDVNDNQP 329
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P F R +Y
Sbjct: 400 LDRE----EKPVYDLSVEATDAGTPPLRAVRTFRLLVTDVNDNAPKFGRERY 447
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 33/121 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
M V ATD D NG +I A GE F +D TG++ T LDR
Sbjct: 1850 MSVRATDPDQGVNG-----KITYAIGEETSWLFRVDNLTGVITTAGPLDR---------- 1894
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQL-SDACTMKITVEDINDNEPMFDRVQ 117
ER+ V+A D+G S ++I V D+NDN P+FD
Sbjct: 1895 ---------------ERQSSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYP 1939
Query: 118 Y 118
+
Sbjct: 1940 F 1940
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + A D G P L + +TV+D+NDN P+F++ +Y
Sbjct: 181 SLDR---EARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRY 229
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + Y +I + E A+FS+ E+GIV E+ + +
Sbjct: 1506 VRVVAVDKDAGDNG-RVSY-VITSANEEARFSVGYESGIVSL-----------ERPMVRS 1552
Query: 61 TDIRVQALDRDDPEREKEIYITVI---AEDNGTPQLSDACTMKITVEDINDNEPMFD 114
T++ + A D P R+ + + + + NG P+L A + ED+ P+ +
Sbjct: 1553 TELEITANDHGSPPRKSTLRLILTLASGQTNGPPRLLLANPVARISEDLQVGAPVLN 1609
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 31/111 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D N ++Y +++A + F++D +TG + T LDR+
Sbjct: 1080 SVSASDPDLGKNA-LLRYAVVQA---NSSFTVDPDTGEITTKEPLDRE------------ 1123
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEP 111
K ++ V+ A D GTP + +K+TV D+NDN P
Sbjct: 1124 --------------TKGVHELVLEARDQGTPSRAARVPLKVTVLDVNDNSP 1160
>gi|432866007|ref|XP_004070658.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oryzias latipes]
Length = 3810
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D SN + Y II R +FSID TG ++ + LD
Sbjct: 1041 LRVSATDRDKDSNAA-VHYNIISG-NSRGQFSIDSVTGEIQVVAPLDY------------ 1086
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
E E+E + V A+DNG P LS+ + + V D+NDN P+F
Sbjct: 1087 -------------ESEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIF 1127
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A D D PSN I+YR + A R F ID +G++ T ++DR+ E +
Sbjct: 931 LQLRAKDSDSPSNA-NIRYRFVGDTAVMARVAFEIDPRSGLITTRGSVDRESNE-----H 984
Query: 59 ITTDIRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
T + +D R +++ITV+ E++ PQ S+ + ED+
Sbjct: 985 YTLHVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKEDV 1034
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 1457 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRESVPFYE----- 1510
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P +++TV D+NDN P+F
Sbjct: 1511 ---------------------LTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVF 1543
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 28/116 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
ATD DP + G + Y + R+ F I TG++ T LDR+ +
Sbjct: 827 ATDPDP-GDPGRMSYSMAPLMNSRSSDYFQIHPNTGLITTTQMLDREHMDLH-------- 877
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D+G+P+LS + ITV D ND+ P+F++ +Y
Sbjct: 878 -----------------HFRVTATDHGSPRLSGTTMVTITVSDRNDHSPIFEQSEY 916
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N ++YR+ G F I+ TG V LDR+ E
Sbjct: 1147 LHIQAIDTDSGDNA-RLEYRL-TGTGSDTPFIINSATGWVTVSSILDRESVE-------- 1196
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D G P LS ++ ITV D+NDN P F + +Y
Sbjct: 1197 -----------------HYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEY 1237
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A+DNG PQ SD +++ V D+NDN P F +Y
Sbjct: 1396 DYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNSPQFLSPRY 1442
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATDVD S G + ++++++ R F ID +TG++ TL ALDR
Sbjct: 1284 IQLSATDVDVSSEG-KLSFQMLES--HRVYFDIDPKTGVISTLAALDR------------ 1328
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + E I V+ DN P L T+ I V D NDN P F
Sbjct: 1329 -------------EEKPEHSIEVVVSDNAAPALRSTATVVIKVLDSNDNRPKF 1368
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P N ++Y I+ +FSID +G + ALDR
Sbjct: 3562 VHVTATDQDGPINN-LLRYSIVSG-DPLQQFSIDHRSGEITVRTALDR------------ 3607
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+P LS A + ITV D+NDN P+F +V +
Sbjct: 3608 -------------EQTPHYSLTVQAADEGSPPLSSAALITITVSDVNDNPPVFSQVNH 3652
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q A D D NG + + + E F ID +G ++ + +LDR+ KE YI
Sbjct: 862 LQFKAADGDSGFNGQVV--FALSSGNEDGCFCIDTFSGELRLVCSLDRE----SKEFYI- 914
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G PQ S M + + D+NDN PMFD+ +Y
Sbjct: 915 --------------------LNITAYDLGMPQRSVWKLMAVNILDVNDNPPMFDQPRY 952
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 72 DPEREKEIYITVIAE--DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER K I VIA+ NGT ++ ++ I V+D+NDN+P+FD Y
Sbjct: 2880 DHERTKWYQIDVIAQGNHNGT-DVASLVSVSIQVQDVNDNQPVFDASPY 2927
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG + Y I A + F+ID TG++ T LD + R +Y
Sbjct: 612 VKVTAWDSDKGKNG-FVTYSI--AHSDPLPFTIDPFTGVILTSEHLDFELANR---LY-- 663
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRV 116
++ V A D+G+P Q+S+ C + IT+ +INDN P+F+RV
Sbjct: 664 -------------------HLRVWASDSGSPFSQVSE-CPVTITLNNINDNFPVFERV 701
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 25/112 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D N + + F I+++TG++ T LD
Sbjct: 2417 RVSASDKDSGRNKDLTYAIVTTGEDDADSFEINQKTGLIVTRKVLDY------------- 2463
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E K+ + V A DNG+ LS + I + D+NDN P F
Sbjct: 2464 ------------EERKQFKLKVRATDNGSVPLSSEAFVTINITDVNDNPPDF 2503
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
+ +Y L+ ++ R + T + + + D E + +TV A D T S+A T++
Sbjct: 2326 RLIYNLEEENASRHFHVDFKTGV-LTVTNPLDYESQTAHTLTVRATDAVTGSFSEA-TIE 2383
Query: 101 ITVEDINDNEPMFDRVQY 118
+ VED+NDN P+F + Y
Sbjct: 2384 VEVEDVNDNAPVFSPLTY 2401
>gi|353232153|emb|CCD79508.1| putative cadherin [Schistosoma mansoni]
Length = 1083
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV+ATDVD S G ++Y P + F+IDK TGI++ +LDR+ EK YI
Sbjct: 705 QVNATDVDS-SAYGPLEYSFANDP-DSVNFTIDKITGIIRNRQSLDRE----EKSQYI-- 756
Query: 62 DIRVQALDRDDPEREKEI-YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ L +D R E I++ ++ + Q + T+ + V+D+NDN P+F
Sbjct: 757 ---FRVLVKDTKIRPSEFNSISINKLNSKSIQYTGTSTVTVIVDDVNDNWPVF 806
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D N + + + + KF ID TGI+ T+ DR+ E+ I
Sbjct: 602 ASDLDIGINS-QMTFFLFEDGINSTKFKIDSHTGIITTMDIFDREVKEKYTLI------- 653
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+G P L+ T++I + D+NDN P+F Y
Sbjct: 654 ------------------ALAVDHGNPPLTGTATVQIIINDLNDNGPVFSTNNY 689
>gi|256082551|ref|XP_002577518.1| cadherin [Schistosoma mansoni]
Length = 1083
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV+ATDVD S G ++Y P + F+IDK TGI++ +LDR+ EK YI
Sbjct: 705 QVNATDVDS-SAYGPLEYSFANDP-DSVNFTIDKITGIIRNRQSLDRE----EKSQYI-- 756
Query: 62 DIRVQALDRDDPEREKEI-YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ L +D R E I++ ++ + Q + T+ + V+D+NDN P+F
Sbjct: 757 ---FRVLVKDTKIRPSEFNSISINKLNSKSIQYTGTSTVTVIVDDVNDNWPVF 806
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D+D N + + + + KF ID TGI+ T+ DR+ E+ I
Sbjct: 602 ASDLDIGINS-QMTFFLFEDGINSTKFKIDSHTGIITTMDIFDREVKEKYTLI------- 653
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D+G P L+ T++I + D+NDN P+F Y
Sbjct: 654 ------------------ALAVDHGNPPLTGTATVQIIINDLNDNGPVFSTNNY 689
>gi|119514236|gb|ABL75899.1| protocadherin 2G24 [Takifugu rubripes]
Length = 940
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 400 LDR---ERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 20/116 (17%)
Query: 17 IQYRIIKAPGERAKF----SIDKETGIVKT-LYALDRDD---------PEREKEIYITTD 62
++++I ++ AKF ++D + G+ Y L R D PE EK + +
Sbjct: 128 MKFKISESAVSGAKFLLERAVDADVGLNGLQSYFLTRTDHFVLKLKEQPEGEKVVEM--- 184
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + LDR E+E+EI++ + A D G P LS + +TV D NDN P+F + Y
Sbjct: 185 ILQKPLDR---EKEEEIFLVLTAMDGGQPVLSGTAQVHVTVLDANDNAPVFTKPVY 237
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
>gi|157108475|ref|XP_001650242.1| protocadherin [Aedes aegypti]
gi|108884002|gb|EAT48227.1| AAEL000717-PA [Aedes aegypti]
Length = 605
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N I Y ++ P ++ F ID +G++ T +D +
Sbjct: 494 IQVTAIDKDE-GNNSAIAYSLLDTPDTHSQWFQIDSNSGLITTRAHIDCET--------- 543
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP + + V+A+DNG P +S T+ +T+ D+NDNEP+FD+ Y
Sbjct: 544 ------------DPVPQ----LIVVAKDNGFPPMSSTGTVLVTIHDVNDNEPIFDQSFY 586
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + V A D G P L T+ IT++D+
Sbjct: 193 RLSSHRERDGVLYLDLQINGFLDR---ETTPAYSLVVEALDGGNPPLRGQMTVNITIQDV 249
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 250 NDNQPIFNQSRY 261
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E + ++V+A D G P L A T+ +TV DINDN P
Sbjct: 419 RDNIIYLV--IVSLPLDR---EIKPNYTLSVVATDTGNPPLHAAKTIFLTVTDINDNAPE 473
Query: 113 FDRVQY 118
F++ Y
Sbjct: 474 FEKEIY 479
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+ATD D NG ++Y I + ++ + F ID TG++ LD + E +
Sbjct: 276 LQVYATDQDAGENG-MVEYAINRRQSDKDQMFRIDPNTGLISVNKPLDFETKELHE---- 330
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D G L + I V D+NDN+P+ + +
Sbjct: 331 ---------------------LVVVAKDRGLQPLETTAFVSIRVTDVNDNQPIINVI 366
>gi|297492717|ref|XP_002699808.1| PREDICTED: protocadherin-11 X-linked isoform 1 [Bos taurus]
gi|296471043|tpg|DAA13158.1| TPA: protocadherin 11 Y-linked isoform 1 [Bos taurus]
Length = 1344
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|156406024|ref|XP_001641031.1| predicted protein [Nematostella vectensis]
gi|156228168|gb|EDO48968.1| predicted protein [Nematostella vectensis]
Length = 4697
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D NG ++Y ++ FSID TG++KT Y LDR ER + YI
Sbjct: 2225 MQVQATDEDRGLNG-EVEYELVIG---FTDFSIDNTTGVIKTRYPLDR---ERTSKQYIV 2277
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A +D R E++ + + C + ++V D NDN P+F +Y
Sbjct: 2278 ----VRA--KDGGHRRNELFRNI-----------NYCLIIVSVVDANDNYPLFHIHRY 2318
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V ATD+D GGTI Y II+ G + F+++ TG++ + LD +D +
Sbjct: 1304 VKVVATDLDG-GVGGTITYTIIQTQDIGSSSLFAVNASTGVITLVQKLDAEDINKH---- 1358
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
+ V AED G TP+ + + + V D+ND+ P F Q
Sbjct: 1359 ---------------------VLYVKAEDGGPTPKYAAITKVVVLVGDVNDHAPRFSSSQ 1397
Query: 118 Y 118
Y
Sbjct: 1398 Y 1398
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 23/116 (19%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A D D P+ GG + +ID +G+V ++ +DR
Sbjct: 2863 MQAIDNDDPNAGGNTKIIYSLEDNNGGYVTIDSSSGLVTSIKMVDR-------------- 2908
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+AL +E +TV A D G P LS +++ ED ND++P F R Y
Sbjct: 2909 ---EAL------QEDSFKVTVRATDQGQPALSGTTVLQVFFEDENDHKPKFVRQYY 2955
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++VHA D+D G + Y + + KF+ID + G ++ DR
Sbjct: 2548 IRVHAEDLDT----GRVTYSL-HPSRDYQKFTIDTQRGTIRNAVVFDR------------ 2590
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E +T IA D G+P S +KI V D ND P F
Sbjct: 2591 -------------EEESRYSLTAIATDAGSPPFSTQVFVKIDVLDANDQPPSF 2630
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R +RE++ + +I N T SD C +KITV D NDN P F
Sbjct: 3121 RGKLDRERKSFYNMIVVVNDTSGQSDECIVKITVTDANDNGPHF 3164
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD DPP + Y + P E F+ID ++ +V ALD +
Sbjct: 373 ATDNDPPGPNQRLLYSL-SGP-EAGLFAIDPDSAVVTLAAALDYE--------------- 415
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI--NDNEPMFD 114
+ I +TV A D G+P LS + + + ++D+ N N P+FD
Sbjct: 416 ---------KGPTVINLTVTATDQGSPALSASAPLIVYIKDVDENQNLPVFD 458
>gi|403272513|ref|XP_003928103.1| PREDICTED: protocadherin-16-like [Saimiri boliviensis boliviensis]
Length = 711
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G + TL LDR E ++ + + V+A+D G
Sbjct: 600 FTIDPESGAISTLRTLDR-------------------------EVQEAVELRVVAQDLGE 634
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ITV+D+NDNEP+F R Y
Sbjct: 635 PSLSATSLVSITVDDVNDNEPIFWRQVY 662
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +++Y + ++A D G+P LS T+ + V D+ND P+F + Y
Sbjct: 496 LDRE----SRDLYELRLVATDAGSPPLSTEETLLLRVADLNDQPPLFSQQHY 543
>gi|359081710|ref|XP_003588167.1| PREDICTED: protocadherin-11 X-linked [Bos taurus]
Length = 1326
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
Length = 3660
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N I Y II E KF+I+ TG++ LD
Sbjct: 2082 LKVLATSKDTGINA-EISYSIIGG-NEHRKFAINNRTGVLSLADTLDY------------ 2127
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER ++ ++T+ A D GTP LS+ T+ I+V D NDN P F + Y
Sbjct: 2128 -------------ERARDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSY 2172
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 27 ERAKFSI--------DKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRD-DPERE 76
ERA F D +TGI + + YAL D + ++ + V L + D E
Sbjct: 1136 ERAPFGTAILKVQAKDNDTGINQVINYALQTDSKNTSEHFHMDPNDGVIYLKKSLDHETL 1195
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ TV+A D G P LS + ++V D+NDN P F++ Y
Sbjct: 1196 SHHHFTVVASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSY 1237
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y + + R F I E+GIV LDR+
Sbjct: 1979 KIHATDADIGINR-KIKYSFLDS--YRDHFRIAPESGIVTLAKPLDRE------------ 2023
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +Y ++V A D G P LS+A T+ I V+DINDN P F Y
Sbjct: 2024 --------------LKAVYNLSVSATDLGNPPLSNAATLIINVQDINDNPPEFTSKHY 2067
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
M+V A D D NG I+Y + G+ F +D TG + TL LD+
Sbjct: 1666 MKVLARDADSGPNG-DIRYALSPDVGDIVNIFDVDAHTGWISTLVPLDK----------- 1713
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ V+A DNG P+ + T+ I ++D ND P+F QY
Sbjct: 1714 --------------EKREDYKFQVLATDNGEPKHTTRTTVIIRLKDYNDCPPVFRETQY 1758
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y I + G+R +F+I+ +TG + LDR
Sbjct: 2187 LQVRANDLDAEENG-RVSYTIER--GDRMEQFAIEPDTGYISVAGTLDR----------- 2232
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P L+ + I + D NDN PMF + Y
Sbjct: 2233 --------------ESISNYVLEVQARDHGVPTLTAYVLVNIEISDANDNPPMFTQPNY 2277
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+HATD D + Y + A P F +D TG +
Sbjct: 237 LQLHATDEDEDKK---LFYSLHAARDPMSLKLFRVDSVTGSI------------------ 275
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ Q LDR E + E + VI +D GTP + T+ ITV D ND+ P F
Sbjct: 276 ----VMAQRLDR---ETQDEHVLIVIVKDQGTPAKRNYATVVITVHDHNDHAPEF 323
>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 3508
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 31 FSIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+ K+TGI Y++ + ++ +I T + + A ++ D ER ++ ++T+ A D G
Sbjct: 2065 LATSKDTGINADIYYSIVGGNEHKKFQINAKTGVIIIA-EQLDYERARDYFLTIQAVDGG 2123
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS+ T+ ITV D NDN P+F V Y
Sbjct: 2124 IPPLSNHATVNITVTDSNDNAPIFSEVSY 2152
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV+A D+D NG I Y I + G+R K FSID++TG + LDR+ E Y+
Sbjct: 2168 QVYANDLDSEENG-NISYYIER--GDRQKQFSIDRKTGQIIVAAPLDRE----EIASYV- 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A DNG P LS + I + D NDN P+F Y
Sbjct: 2220 --------------------LEVHARDNGIPMLSSFVMVNIEILDANDNPPLFSLPNY 2257
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNG 89
S D +TGI + + YA+ D +I D V L + D E + + TVIA D G
Sbjct: 1131 SRDNDTGINQQVRYAIQNDTENSTDLFHIDADEGVIFLKQSLDHETHESHHFTVIAMDRG 1190
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ++V D+NDN P F++ Y
Sbjct: 1191 VPSLSSTAHVWVSVIDMNDNPPKFEQPSY 1219
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 1646 LKVIAHDKDLGSNG-EVRYSFGSDIGELANVFAVDAYTGWISTLVQLDK----------- 1693
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 1694 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNAPAF 1733
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV LDR+ K +Y
Sbjct: 1959 KVHATDDDIGINR-KIRYEFIDS--ADGHFLIAADSGIVTLAKPLDRE----TKAMY--- 2008
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +QALD+ GTPQL ++ + V+DINDN P F
Sbjct: 2009 NVTIQALDQ------------------GTPQLMGIASLIVNVQDINDNPPEF 2042
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+D+ETG++KT+ LDR+ +
Sbjct: 1854 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDRETGVLKTVGQLDRETQAKYS----- 1905
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ DRD P E + ++I V D+NDN P F Y
Sbjct: 1906 --LMAHVQDRDKPTWEC------------------SSQLEILVSDLNDNAPKFTMQTY 1943
>gi|359319334|ref|XP_003639054.1| PREDICTED: cadherin-related family member 2-like [Canis lupus
familiaris]
Length = 1311
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ + A D D P +N + + ++ P FS+ +TGI++ L LDR+ E
Sbjct: 606 ISLQAQDNDQPNTNNSRLHFSLLPGPYSH-NFSVGPDTGILRNLGPLDREAIE------- 657
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P I +TV+ D G P LS + I VEDINDN P+F++ Y
Sbjct: 658 -------------PTLGGRIVLTVLVADCGMPVLSTGVNVTINVEDINDNLPIFNQSIY 703
Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA D D GG I Y ++ PG A+ F +D ++G+V ++
Sbjct: 506 IHAFDPDT-GEGGRITYSLL--PGNGAEIFKVDPDSGMVTVRNSV--------------- 547
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
LDR E++ E Y+T+ A D LS + T+ I + DINDN P+
Sbjct: 548 -----LLDR---EKQAEYYLTLQATDG--ENLSASTTLHIILLDINDNWPV 588
>gi|119514243|gb|ABL75906.1| protocadherin 2G31 [Takifugu rubripes]
Length = 947
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 407 LDR---ERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 454
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 46 LDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
LD+ D + E+ + + LDR E+ + I + + A D G PQ+S + ITV D
Sbjct: 180 LDQTDGTKNVEMVLK-----KPLDR---EKNEHISLVLTALDGGEPQMSGTMLILITVLD 231
Query: 106 INDNEPMFDRVQY 118
NDN P+F + Y
Sbjct: 232 ANDNAPIFTQPIY 244
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 511 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 557
>gi|359081714|ref|XP_003588168.1| PREDICTED: protocadherin-11 X-linked [Bos taurus]
Length = 1336
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|297492721|ref|XP_002699810.1| PREDICTED: protocadherin-11 X-linked isoform 3 [Bos taurus]
gi|296471045|tpg|DAA13160.1| TPA: protocadherin 11 Y-linked isoform 3 [Bos taurus]
Length = 1307
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|410913761|ref|XP_003970357.1| PREDICTED: protocadherin gamma-A8-like [Takifugu rubripes]
Length = 800
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 46 LDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
LD+ D + E+ + + LDR E+ + I + + A D G PQ+S + ITV D
Sbjct: 173 LDQTDGTKNVEMVLK-----KPLDR---EKNEHISLVLTALDGGEPQMSGTMLILITVLD 224
Query: 106 INDNEPMFDRVQY 118
NDN P+F + Y
Sbjct: 225 ANDNAPIFTQPIY 237
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
>gi|350591205|ref|XP_003483227.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like [Sus
scrofa]
Length = 2864
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 534 LQISATDRDAHVNG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRWLDREAVPVYE----- 587
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 588 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 620
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 473 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 519
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A D+G+P LS + + +TV D+NDN P F +Y
Sbjct: 270 ESVEHYFFGVEARDHGSPPLSASARVTVTVLDVNDNRPEFTMKEY 314
>gi|341899515|gb|EGT55450.1| hypothetical protein CAEBREN_29330 [Caenorhabditis brenneri]
Length = 2586
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 32/118 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V+A D D NG II+ E ++ F ID+++G++KT LDR+ R
Sbjct: 490 RVYAIDEDSGPNG------IIRYSMEGSEDFIIDEDSGVLKTTKLLDRETVARYS----- 538
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L+ + T+ + ++DINDN P+FD+ +Y
Sbjct: 539 --------------------LKVTARDMGTPPLNTSTTITVVLKDINDNAPIFDKKEY 576
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG I+Y + + G ++ +I+ ++G+++T LDR
Sbjct: 280 LSVFARDLDSGENG-EIEYSLGEGNG-KSLLAINSKSGVIQTAAPLDR------------ 325
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + VIA D G P+ + ++ITV D+NDN P+F Y
Sbjct: 326 -------------ETLSLIRLDVIASDKGVPKRESSALVEITVLDVNDNAPVFASDSY 370
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D NG + Y + ++ A F +D+ +G ++ LDR
Sbjct: 794 LQVSAIDADIGPNG-IVDYFLNESSSSPAIQLFRLDRTSGTLRVSSKLDR---------- 842
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I + + A D G P LS A + +T+ D+NDN P F+++ Y
Sbjct: 843 ---------------EQFAVIVLPIFARDRGNPSLSAASEITLTLSDVNDNAPAFEQLSY 887
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 40 VKTLYALDRDDPEREKEIY------------ITTDIRVQA-LDRDDPEREKEIYITVIAE 86
V TL A D D + + IY + DI V A LDR+D + V A
Sbjct: 691 VITLKAEDHDRGDNARLIYSIDSTQFFKIDSASGDISVAADLDRED---RATFSVIVTAS 747
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ +P L+ + +++ ++DINDN P F Y
Sbjct: 748 DHASPPLNTSTQIEVILDDINDNAPQFTSSSY 779
>gi|410913755|ref|XP_003970354.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 813
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 1 MQVHATDVD---PPSNGGTIQYRIIKAPGERAKF----SIDKETGIVKT-LYALDRDD-- 50
+ V TD++ P ++++I ++ AKF ++D + G+ Y L R D
Sbjct: 109 VAVEVTDINDNPPLFERSEMKFKISESAVSGAKFLLERAVDADVGLNGLQSYFLTRTDHF 168
Query: 51 -------PEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
PE EK + + I + LDR E+E+EI++ + A D G P LS + +TV
Sbjct: 169 VLKLKEQPEGEKVVEM---ILQKPLDR---EKEEEIFLVLTAMDGGQPVLSGTAQVHVTV 222
Query: 104 EDINDNEPMFDRVQY 118
D NDN P+F + Y
Sbjct: 223 LDANDNAPVFTKPVY 237
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
>gi|119514242|gb|ABL75905.1| protocadherin 2G30 [Takifugu rubripes]
Length = 940
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E EI + + A D G PQ+S + ITV D+NDN P+F + Y
Sbjct: 190 LDRE----ENEIMSLALTAVDGGEPQMSGTIQILITVLDVNDNAPVFTQPVY 237
>gi|119514240|gb|ABL75903.1| protocadherin 2G28 [Takifugu rubripes]
Length = 944
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 405 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 451
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 64 RVQALDRDDPEREKEIYITVI--AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
RV+ + + +REK+ +I+++ AED G PQ++ + + V D NDN P+F + Y
Sbjct: 186 RVEMILQKPLDREKQEHISLLLTAEDGGEPQMTGTMRIYVAVLDANDNAPVFTKPVY 242
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 508 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 554
>gi|119514237|gb|ABL75900.1| protocadherin 2G25 [Takifugu rubripes]
Length = 950
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 411 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 457
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 514 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 560
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 43 LYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
L ++R D + E+ + + LDR E + + + + A D G PQLS + +T
Sbjct: 182 LKTVNRGDGSKHVEMVLQ-----KQLDR---ENQNHVSLILTALDGGEPQLSGTMQIIVT 233
Query: 103 VEDINDNEPMFDRVQY 118
V D NDN P+ + +Y
Sbjct: 234 VLDANDNPPVCSKPEY 249
>gi|297492719|ref|XP_002699809.1| PREDICTED: protocadherin-11 X-linked isoform 2 [Bos taurus]
gi|296471044|tpg|DAA13159.1| TPA: protocadherin 11 Y-linked isoform 2 [Bos taurus]
Length = 1334
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D N I Y + I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNA-EIHYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI + ++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYQLIKGQNIFGLDIIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 IT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVF 249
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I ++D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|410933011|ref|XP_003979886.1| PREDICTED: protocadherin gamma-A5-like, partial [Takifugu rubripes]
Length = 780
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + A D G P++S + ITV D NDN P+F + Y
Sbjct: 191 DREKQEQISLVLTAVDGGEPRMSGTMLIIITVLDANDNAPVFTQSTY 237
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 36 ETGIVKTLYALDRDD--PEREKEIYITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQ 92
+ + TL D +D P E+ Y + D V A+ D E+ K+ + V A+D G+P
Sbjct: 423 SSSVTLTLQISDVNDNPPVFERSSYESADSGVVHAVRSFDYEQIKDFHFLVKAQDGGSPP 482
Query: 93 LSDACTMKITVEDINDNEP 111
LS ++KI ++D NDN P
Sbjct: 483 LSSNVSVKILIQDQNDNPP 501
>gi|410927542|ref|XP_003977200.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 540
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + A D G P++S + ITV D NDN P+F + Y
Sbjct: 191 DREKQEQISLVLTAVDGGEPRMSGTMLIIITVLDANDNAPVFTQSTY 237
>gi|410913757|ref|XP_003970355.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 798
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 399 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 445
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 502 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 548
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 43 LYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
L ++R D + E+ + + LDR E + + + + A D G PQLS + +T
Sbjct: 170 LKTVNRGDGSKHVEMVLQ-----KQLDR---ENQNHVSLILTALDGGEPQLSGTMQIIVT 221
Query: 103 VEDINDNEPMFDRVQY 118
V D NDN P+ + +Y
Sbjct: 222 VLDANDNPPVCSKPEY 237
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 523 LQVLAHDRDEGLNS-VLSYALAETPETHAQWFQIDPQTGLITTRSHID------------ 569
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TVIA D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 570 -------------CETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFY 615
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 222 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGLMTVNITIQDV 278
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 279 NDNQPIFNQSRY 290
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +N ++Y I+ + A +GIVKT LDR+
Sbjct: 2347 QVQAFDSDAGANA-RLRYHIVDGNHDNAFVIEPAFSGIVKTNIVLDREI----------- 2394
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++Y + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2395 ---------------RDVYNLKIIATDEGVPQMTGTSTVRVQIVDVNDNQPTF 2432
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y + + ER F+ID +G + +
Sbjct: 953 HAHDKDSGSSG-QVTYSLAR---ERQLFAIDPRSGHL----------------------V 986
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R + V A D G P L+ T+ + V+D+NDN P+F+R +Y
Sbjct: 987 LSQHLDYETSQRHS---LVVTATDGGVPPLATNLTILVDVQDVNDNPPVFERDEY 1038
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ ATD D N +I Y I+K FSID TG+++T LD + E+ IY
Sbjct: 1277 VRIRATDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPATGVIRTRVVLDHE----ERSIY 1331
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A D G P +++ V D+NDN P F
Sbjct: 1332 ---------------------RLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTF 1365
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+ATD+D N I YRI+ A G + G + AL IY+
Sbjct: 1053 VQVNATDLDT-GNNARITYRIVDA-GADNATAPAAAGG--SSDVALHFGIFPNSGWIYLR 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +R + + ++A DNGTP + + V D NDN+P F R QY
Sbjct: 1109 A-----PLDRETRDRYQ---LVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQY 1158
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID +TG + ALD + E +
Sbjct: 305 LQVYASDTDAEENG-LVEYAINRRQSDKEQMFRIDPQTGAIFINKALDFETKELHE---- 359
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D+G L + I V D+NDN+P + +
Sbjct: 360 ---------------------LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVI 395
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++V+A D GTP L + ++ + + D+NDN P F++ Y
Sbjct: 462 DRESTSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQELY 508
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1979 VRIKATDADLGVNARLV-YSL--ANETQWQFAIDSKSGLITTVGKLDR------------ 2023
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V D+NDN P+F+R Y
Sbjct: 2024 -------------ELQSSYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYPY 2069
>gi|431894693|gb|ELK04489.1| Protocadherin-11 X-linked [Pteropus alecto]
Length = 1017
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N I AP E F++D TGI+ + LDR
Sbjct: 487 KISATDADTGRNAEISYLLGIDAPSE---FNLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEY 575
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R + ++ + ++ D E +E I ++A D G P L+ + + + ++D
Sbjct: 401 DHDVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLVKIKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S +++ V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVNVADTNDNRPVF 249
>gi|410933151|ref|XP_003979955.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 720
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 399 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 445
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 502 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 548
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 43 LYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
L ++R D + E+ + + LDR E + + + + A D G PQLS + +T
Sbjct: 170 LKTVNRGDGSKHVEMVLQ-----KQLDR---ENQNHVSLILTALDGGEPQLSGTMQIIVT 221
Query: 103 VEDINDNEPMFDRVQY 118
V D NDN P+ + +Y
Sbjct: 222 VLDANDNPPVCSKPEY 237
>gi|410933322|ref|XP_003980040.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 605
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TTD LDR ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 399 LTTD---SELDR---ERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 452
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 1 MQVHATDVD---PPSNGGTIQYRIIKAPGERAKFS----IDKETGIVK------------ 41
+ V TD++ P N G +++RI ++ A FS ID + GI
Sbjct: 114 ITVEVTDINDNAPTFNSGEMKFRISESAVTGAVFSLQPAIDLDVGINGLQNYRLHPADNF 173
Query: 42 TLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
L ++ D + E+ + + LDR E + + + + A D G PQLS + I
Sbjct: 174 ALKLQNQADGSKMVEMVLQ-----KPLDR---ETKDHLTLVLTAVDGGEPQLSGTVQIDI 225
Query: 102 TVEDINDNEPMFDRVQY 118
V D NDN P+F + Y
Sbjct: 226 NVLDANDNAPVFTQKIY 242
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 509 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 555
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD NG I Y +IK E +F+ID TG V + LD
Sbjct: 1274 LRVSASDVDEGKNG-LIHYSVIKG-NEEKQFTIDNSTGQVTLIGKLDH------------ 1319
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E +T+ A D+G LS CT+ I V D NDN P F +
Sbjct: 1320 -------------EATASYSLTIQAVDSGAVSLSSVCTLNIEVLDENDNSPSFPK 1361
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+ + + D E + + V+A D G P LS + +++ D+NDN P+F VQY
Sbjct: 684 RLSTISQLDREEQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLFYPVQY 738
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ++D D P N G Y ++ + FS++ G++ T +DR
Sbjct: 3572 MTLQSSDPDLPPNQGPFSYHLLSTGTATSYFSLNT-AGVLSTTREIDR------------ 3618
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++VI D+G PQ+S T+ I V D NDN
Sbjct: 3619 -------------EQICDFYLSVITRDSGIPQMSSTGTVHIKVIDQNDN 3654
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+++D D N II G ++F+I+ TG + T LDR+ KE Y
Sbjct: 2428 LLVNSSDADASVNA------IISLSGGNSQFTINPSTGQIITSALLDRE----TKENYT- 2476
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G P LS + ++ +T+ D+NDN P F Y
Sbjct: 2477 --------------------LIIVARDGGFPNALSSSTSVLVTIADVNDNPPKFQHHPY 2515
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + FS+++++G + LD + + EI
Sbjct: 957 FQAKAVDPDEGING-IVLYSLKQNP--KDLFSVNEQSGAISLTGPLDINAGSYQVEI--- 1010
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G P+ S + + ++V D+NDN P+FD++ Y
Sbjct: 1011 -----------------------MASDLGVPRRSSSFILTVSVHDVNDNSPVFDQLSY 1045
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 65 VQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++LDR+ +KE Y+ +I A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2363 VKSLDRE----KKEQYVMLITATDSGSPTLTGTGTIAVKVDDVNDNIPKFAFNMY 2413
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 24/118 (20%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D SNG ++Y + F ++ +G +K+ + LDR+ R++ + T
Sbjct: 1165 KISAFDKDSGSNG-EVRYSFEHM---QPDFELNAISGEIKSTHQLDRESLMRQRGTAVFT 1220
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
TVIA D G P+ L D T+++ ++DINDN P F + Y
Sbjct: 1221 -------------------FTVIAMDQGLPKPLRDQATVQVYLKDINDNVPKFLKELY 1259
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VHA+D D NG I Y II+ TG ++ + ++YI
Sbjct: 1060 FSVHASDKDSGENG-EIAYNIIEG-----------NTGDAFGIFP--------DGQLYIK 1099
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ LDR+ ER + V A D LS + + +ED+NDN P+F+ Y
Sbjct: 1100 SE-----LDRELQERYT---LVVAASDRAVEPLSATVNVSVILEDVNDNRPLFNSTNY 1149
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G+ KFSI G V+ LDR
Sbjct: 2114 FKAQATDPDSGPNS-YIEYSLLNPSGK--KFSIGTIDGEVRLTGELDR------------ 2158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T+IA D G P LS + + + V DINDN P+F + Y
Sbjct: 2159 -------------ETVSNYTLTIIATDKGQPSLSSSTNVVVVVLDINDNNPVFAQKLY 2203
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 44/117 (37%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2937 QISATDPDEGSNGQV--FYFIKSQSEF--FRINASTG-----------------EIFNKQ 2975
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q V + D G+P L T+ I + D NDN P F QY
Sbjct: 2976 SLKFQNSSGSGNANLNRHSFIVTSSDRGSPPLMSETTVTINIVDSNDNAPHFLASQY 3032
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV +TD D SNG ++Y II +F ID TG++ +LDR
Sbjct: 2218 VQVSSTDGDEGSNG-QVRYAIISG-NINNEFRIDSVTGVITVGKSLDR------------ 2263
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ +TV + D G+ D T+ I + D+ND P F+ Y
Sbjct: 2264 -------------EKKPSYSLTVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPY 2308
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 35/124 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP-----GERA-KFSIDKETGIVKTLYALDRDDPERE 54
+QV A D D +N I+YR+ A G A F +D E+G+++ ALD
Sbjct: 260 LQVTAADADEGTNA-DIRYRLEGAESAGVDGAGALPFEVDPESGVIRIREALDY------ 312
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E ++ +TV A D G P LS I + D+NDNEP
Sbjct: 313 -------------------ELRRQYSLTVQAIDRGVPALSGRAEALIRLLDVNDNEP--- 350
Query: 115 RVQY 118
RV++
Sbjct: 351 RVKF 354
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y II + + FSI + G ++++ LDR
Sbjct: 2732 ITVTAADKDSGPNG-QLNYEIISGNVDNS-FSIHRANGEIRSVRPLDR------------ 2777
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E + +T+ A D GTP S + + I V D NDN P F ++
Sbjct: 2778 -------------ENVAQYMLTIKASDRGTPVQSASVQVLINVLDENDNAPKFSQI 2820
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 26/115 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I FSI+ +TG V LDR
Sbjct: 3470 VSAFDSDSLPSWNRFSY-FIGNGNHNGAFSINPQTGQVTVTAELDR-------------- 3514
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E + V+A D+G P + + ++ IT+EDINDN P+ +
Sbjct: 3515 -----------ETLPVYNLCVLAIDSGAPSATGSASLLITLEDINDNGPILSTTE 3558
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D D NG T++Y I + G+ ++F I +TG++ + LDR+ EK Y
Sbjct: 755 VSASDPDLGING-TVRYTI--SAGDTSRFQIHNQTGVITSKTVLDRE----EKTAY---- 803
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D G Q + + + V D DN P+F + Y
Sbjct: 804 -----------------QLQIGAYDGGNLQSQNQAIVTVNVLDTQDNPPVFSQDTY 842
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I+ ++G++ T ALDR+ EK Y
Sbjct: 710 VSATDPDLGPNG-TVKYSI--SAGDRSRFQINAQSGVISTKMALDRE----EKTAY---- 758
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 759 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 797
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 606 ATDGDLGDNG-TVRFSLQEAESDQRSFRLDPVSGRLSTISSLDRE----EQAFY------ 654
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D GTP S + +++ D+NDN P+F VQY
Sbjct: 655 ---------------SLLVLATDLGTPPQSSVAQINVSLLDMNDNSPVFYPVQY 693
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y +IK ER +F+I +G V + LD
Sbjct: 1229 LRVSASDVDE-GNNGLIHYSVIKGNEER-QFAIGSTSGQVTLIGKLDY------------ 1274
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E ++ + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1275 -------------EATPAYFLVIQAVDSGTVSLNSTCTLNIDILDENDNTPCFPK 1316
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3527 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3573
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3574 -------------EQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3609
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 963 IEILASDMGVPQLSSSVILTLYVHDVNDNPPVFDQLSY 1000
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + ++ + + ++RV Q
Sbjct: 2265 VNVPENLGTLPKTILQVVARD-----DDQGSNSKLSYVLRGGNEDQAFTLSASGELRVTQ 2319
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 SLDR---ETKEHFVLVITATDSGFPALTGTGTVNVIVDDVNDNVPTFASKMY 2368
Score = 38.9 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2687 LTVSAMDKDSGPNG-QLDYEIVHGNKENS-FSINHATGEIRSIRPLDR------------ 2732
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I + D NDN P F ++
Sbjct: 2733 -------------EKVSHYMLTVKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2775
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E + V+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2100 TIDGEVRLTGELDREEVSNYTLMVVATDKGQPALSSSTEVVVMVLDINDNNPVFAQALY 2158
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + Y+ + P+ E DR+ R++ + TVIA D
Sbjct: 1123 AVDKDFGPNGEVRYSFEMVQPDFELHTITGEITSTHQFDRESLMRQRGTAVFSFTVIATD 1182
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1183 QGLPQPLKDQATVHVYMKDINDNAPKF 1209
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ + +F +D TG++ + LDR
Sbjct: 2173 LQVFAADGDEGTNG-QVRYGIVDGSTNQ-EFRMDSVTGVITVVKPLDR------------ 2218
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + D+ND P F+ Y
Sbjct: 2219 -------------EKTATYLLTVQAADRGSTPRTDTSTVSIVLLDMNDFVPTFELSPY 2263
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FS++ +TG + LDR+
Sbjct: 3425 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSVNPQTGQITVTAELDRE------------- 3470
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+G P + + ++ +T+EDINDN PM
Sbjct: 3471 -------------TLPIYNLTVLAVDSGIPSATGSASLLVTLEDINDNGPML 3509
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I Y I A E F+I+ TG++ ALD + ++ +
Sbjct: 3110 VSARDRDAAMNG-LITY-TISAGNEEGIFAINSSTGVLTLAKALDYELCQKHE------- 3160
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT+ A D G + C++ ITV D+NDN P+F +Y
Sbjct: 3161 ------------------ITISATDGGWVARTGYCSVTITVIDVNDNSPVFVPDEY 3198
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1058 DRELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1104
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV+ATD D SNG + IK+ E F I+ TG + AL +
Sbjct: 2892 QVYATDPDEGSNGQIFYF--IKSQSEY--FRINATTGEIFNKQALKYQN----------- 2936
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V + R I V + D G P L T+ I + D NDN P F R +Y
Sbjct: 2937 ---VSGFSNVNINRHSFI---VTSSDRGNPSLLSETTVTINIVDSNDNAPQFLRDKY 2987
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIHYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAVDRGVPSLLGRAEALIQLLDVNDNDPV 352
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYI 59
MQV ATD+D SN + Y I+ + A F I+ +G+VKT LDR EI
Sbjct: 1579 MQVSATDLDEGSNAHVL-YHIVDGNHDNA-FVIEPPFSGLVKTNIVLDR-------EI-- 1627
Query: 60 TTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++Y +T+IA D G PQL+ T+++ + D NDN+P F
Sbjct: 1628 -----------------RDVYKLTIIATDEGNPQLTGTATLRVNIVDANDNQPTF 1665
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKET-GIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N I YRI K G ++D ET GI IY+
Sbjct: 440 LQVAATDQDT-GNNARITYRIKKIIGNGTTGNVDDETFGIFP-----------NSGLIYL 487
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + +++ D + + A DNGTP L+ C + ITV D NDN+P F Y
Sbjct: 488 KENLDRETINKYD--------VLITATDNGTPPLTATCKILITVTDANDNDPKFQMDNY 538
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + ++A D+G P LS T+ I V+D+NDN P+F+R +Y
Sbjct: 377 RLDYEMNQRHSLVIVATDSGIPTLSSNMTLIIEVQDVNDNAPIFERSEY 425
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D+D NG I Y I KFSID +G+
Sbjct: 1156 KVVASDLDEGVNG-EITYSITSG-NIGNKFSIDIHSGL---------------------- 1191
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+ + LDR E + + + A+D G P L +C + I V+D NDN+P F + +Y
Sbjct: 1192 -LSARPLDR---EVHSKYVLGITAQDRGNPTSLQGSCNITIVVDDENDNDPQFSQQKY 1245
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 42/98 (42%), Gaps = 26/98 (26%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER 75
+IQY I E FSID ETGI++T LD EI+ + + VQAL
Sbjct: 238 SIQYYIHSGDPE-GNFSIDPETGIIQTSTILDH-------EIHSSILLNVQALS------ 283
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E N T + I +ED+NDN P F
Sbjct: 284 ---------GESNPT---YGHTQVNIEIEDVNDNAPEF 309
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D+D NG + Y I + KFS+D +TGI+K + D+ +K ++
Sbjct: 955 KIIAVDLDSDENG-RVSYTITSG-NDDGKFSLDHDTGILKLSKSFVIDNNTLKKNSFV-- 1010
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDN 88
+ V A+D P++ K + ++ + N
Sbjct: 1011 -LNVTAMDHGLPQKFKMASVNIVTQGN 1036
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDI-RVQALDRDDPEREKEIYITVIAEDNGTP 91
D + G+ K Y L ++ + KE +I +D + + D E+ K VIA D G
Sbjct: 13 DSDCGVNAKVNYTLG-EESGKLKEFFIKSDTGEICIANELDYEKIKSYEFPVIASDRG-- 69
Query: 92 QLSDACTMKITVEDINDNEPMF 113
LS +K+TV D+ND+ P+F
Sbjct: 70 GLSTTAIVKVTVTDVNDHRPIF 91
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
+Q ++ G R + TG + L+ +D K +I I +++ D E
Sbjct: 1473 LQVSAVRTDGRRHRIKYSLLTGRHENLFTID------SKTGWI--KIEQSSVNYLDYENF 1524
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K I +TV+AE +G L C + I ++D NDN P F + Y
Sbjct: 1525 KSIKLTVMAETDG--PLFGYCDVIIKLQDENDNAPKFTQEYY 1564
>gi|72679460|gb|AAI00555.1| Fat1 protein [Mus musculus]
Length = 1309
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D + E Y+TV A D GTP LSD T+ I V DINDN P+F + Y
Sbjct: 4 DYKSSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTY 50
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D PSN I Y II+ + + F+ID G VK LDR
Sbjct: 65 ITIMADDADGPSNS-HIHYSIIEG-NQGSPFTIDPVRGEVKVTKPLDR------------ 110
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P + T+ I V D+NDN P+F R Y
Sbjct: 111 -------------ETISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNY 155
>gi|170031841|ref|XP_001843792.1| protocadherin [Culex quinquefasciatus]
gi|167871191|gb|EDS34574.1| protocadherin [Culex quinquefasciatus]
Length = 955
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N I Y ++ P ++ F ID +G++ T +D +
Sbjct: 715 IQVTAIDKDE-GNNSAIAYSLLDTPDTHSQWFQIDANSGLITTRAHIDCET--------- 764
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP + + ++A+DNG P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 765 ------------DPVPQ----LIILAKDNGYPPLSSTGTVLVTIHDVNDNEPIFDQSFY 807
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + V A D G P L T+ IT++D+
Sbjct: 414 RLSSHRERDGVLYLDLQINGFLDR---ETTPAYSLVVEALDGGNPPLRGLMTVNITIQDV 470
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 471 NDNQPIFNQSRY 482
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E + ++V+A D G P L A T+ +TV DINDN P
Sbjct: 640 RDNIIYLV--IVSLPLDR---EIKPNYTLSVVATDTGNPPLHAAKTIFLTVTDINDNAPE 694
Query: 113 FDRVQY 118
F++ Y
Sbjct: 695 FEKEIY 700
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+ATD D N G ++Y I + ++ + F ID TG++ LD +
Sbjct: 497 LQVYATDQDATEN-GMVEYAINRRQSDKDQMFRIDPLTGLISVNKPLDFE---------- 545
Query: 60 TTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
KE++ + V+A+D G L + I V D+NDN+P+ +
Sbjct: 546 ----------------TKELHELVVVAKDRGLQPLETTAFVSIRVTDVNDNQPIIN 585
>gi|119514238|gb|ABL75901.1| protocadherin 2G26 [Takifugu rubripes]
Length = 940
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + AED G P++S + ITV D+NDN P+F + Y
Sbjct: 191 DREKQEQISLVLTAEDGGEPRMSGTMLIIITVLDVNDNAPVFTQSTY 237
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+ +SI G VK L+ +++++ +I + D+ D E+ + I ++A D
Sbjct: 266 KITYSITNALGNVKKLFDINKEN----GQISLIGDM--------DFEKYQHFQINLLASD 313
Query: 88 NGTPQLSDACTMKITVEDINDNEP 111
G L+D+C + + V D+NDN+P
Sbjct: 314 EGG--LTDSCKLIVDVRDVNDNKP 335
>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
rerio]
gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
Length = 2941
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +GIV+TL LDR++ T
Sbjct: 895 LQVSATDRDSGLNG-RVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDREN---------T 944
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+QA A D G P L A M++T+ D+NDN P+F++ ++
Sbjct: 945 AIYNLQAF----------------AVDKGVPALKTAVDMQVTILDVNDNPPVFEKDEF 986
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEIYI 81
D+ G V + A D D E + YI D Q +D D D E + +
Sbjct: 784 DRPVGTTVVMISATDEDTGENARITYIMDDSIPQFNIDADSGAVTTQMELDYEDQVSYTL 843
Query: 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ A DNG PQ SD ++I V D+NDN P+F R +Y
Sbjct: 844 AITARDNGIPQKSDTTYLEILVNDVNDNSPVFQRDRY 880
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P NG I Y ++ + G F ID +G+++T +DR+ T
Sbjct: 371 LTVRATDGDAPING-NILYHLLNSNGTNDVFEIDSRSGVIRTRGLVDRE----------T 419
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D + ++ +D R D G P+ S T+ I VED NDN P F +Y
Sbjct: 420 VDSYMLMVEANDQGR-----------DPG-PR-SATATVHIVVEDDNDNAPQFSEKRY 464
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
VDP G ++Y + R+ F++D +G+V T+ LDR+ T D
Sbjct: 268 VDPDEGEAGRLEYVLEALFDSRSNNLFAVDPASGVVSTVEILDRE----------TKDTH 317
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V V A D+GTP+ + T+ +TV D ND++P F++ Y
Sbjct: 318 V---------------FRVTAVDHGTPRRTAMATLTVTVSDTNDHDPAFEQQDY 356
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N + + I+ R +F ID +TG + + LD
Sbjct: 479 LQVTATDQDR-GNNAVVHFSIMSG-NTRGQFYIDAQTGKLDLVSQLDY------------ 524
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E KE + + A+D G P LS+ + + V DINDN P+F
Sbjct: 525 -------------EMNKEYTLRIRAQDGGRPPLSNISGLVTVQVLDINDNAPIF 565
>gi|198437132|ref|XP_002124366.1| PREDICTED: similar to KIAA0279 protein [Ciona intestinalis]
Length = 2808
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +HATD D SN G I+Y FS+D +G ++T LDR+
Sbjct: 871 LTIHATDRDS-SNNGEIRYTFEGGNNGNGYFSVDPHSGDIRTALPLDREH---------- 919
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+D+ D + A D GTP+LS + + I + D++DN P F
Sbjct: 920 -------IDKYD--------LVAFAVDQGTPKLSSSVAITINILDVDDNPPTF 957
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +T+ A D G+P + + +T+ED+NDN P F R QY
Sbjct: 393 DREAHSQYLLTIAARDQGSPSRNSTVPVTVTIEDVNDNHPQFTRAQY 439
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D N I Y A + F I+ G ++T LD D+ +
Sbjct: 768 VQVHAVDGDIGDNA-RITYCFSDAV---SNFQINSNNGEIRTRQKLDFDNLSK------- 816
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + VIA DNG P D ++I++ DINDN P+F + +Y
Sbjct: 817 ------------------IMLGVIARDNGIPPEEDRAVVEISLTDINDNAPVFQQTKY 856
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + I Y I+ G F ID + G ++ LD
Sbjct: 558 LQVEAEDGDALRSSSRIAYTILNR-GSPVPFRIDLQNGTIQLSQKLDH------------ 604
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER+ TV A D+G+P+ + + I V D+NDN P F Y
Sbjct: 605 -------------ERQGSYTFTVQASDHGSPRRTATTQVTINVRDVNDNAPYFTSNSY 649
>gi|307184767|gb|EFN71081.1| Protein dachsous [Camponotus floridanus]
Length = 661
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D +N ++Y ++ + F+ID+ TG++ T+ + E E+
Sbjct: 477 LRVTATDLDEGTNSA-VRYSLLNT---TSWFAIDEITGLISTVTHV-------ECEV--- 522
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP + VIA D+G P LS + T+++TV D NDNEP+F++ Y
Sbjct: 523 -----------DPAP----ILVVIATDSGRPPLSSSATVRVTVHDYNDNEPIFEKPLY 565
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q+ D E ++ + A D GTP L + + +TV+D+NDN P+F++ +Y
Sbjct: 216 LQSSGSLDREARSRYHLVIEALDGGTPPLRSSLHVNVTVQDVNDNPPIFNQTRY 269
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ EK +Y ++V A D GTP L T ++ V D+NDN P F R +Y
Sbjct: 415 LDRE----EKPVYDLSVEATDAGTPPLRAVRTFRLLVTDVNDNAPRFARERY 462
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ ATD D PSN I+YR + A RA F ID +G++ T ++DR+ E +
Sbjct: 620 LQLRATDSDSPSNA-NIRYRFVGDSATMARAAFEIDPRSGLITTRGSVDRETNE-----H 673
Query: 59 ITTDIRVQALDRDDPEREK--EIYITVIAEDNGTPQLSD 95
T + +D R +++ITV+ E++ PQ S+
Sbjct: 674 YTLQVEASDQGKDPGPRSATVKVFITVLDENDNVPQFSE 712
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D SN + Y II R +FSID TG ++ + LD
Sbjct: 730 LRVSATDRDKDSNA-VVHYNIISG-NSRGQFSIDSVTGEIQVVAPLDY------------ 775
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
E E+E + V A+DNG P LS+ + + V D+NDN P+F
Sbjct: 776 -------------EAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIF 816
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ ++GIV+ LDR++ P E Y
Sbjct: 1146 LQISATDRDAHANG-RVQYTFQNGEDGGGDFTIEPKSGIVRNSRRLDRENVPFYELTAY- 1203
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
A+DR P ++ ++I ++TV D+NDN P+F
Sbjct: 1204 -------AVDRGVPSQQTPVHI------------------QVTVLDVNDNAPVF 1232
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 41/133 (30%)
Query: 2 QVHATDVDPPS--------------NGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYA 45
QVH + PP + G + Y + R+ F I +TG++ +
Sbjct: 498 QVHVAENQPPGTSVIIMSASDPDGGDAGRLSYTMAPLMNSRSSDYFHIHPDTGLITSTQI 557
Query: 46 LDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
LDR+ + Y V A D+G+P+LS + ITV D
Sbjct: 558 LDREHMDLH-------------------------YFRVTATDHGSPRLSGTTMVSITVSD 592
Query: 106 INDNEPMFDRVQY 118
ND+ P+F++ +Y
Sbjct: 593 RNDHSPIFEQSEY 605
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A+DNG PQ SD +++ V D+NDN P F +Y
Sbjct: 1085 DYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRY 1131
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N ++YR+ + F I+ TG V LDR+ E
Sbjct: 836 LHIQAIDTDSGDNA-RLEYRLTGTSSD-TPFVINAATGWVTVKSILDRESVE-------- 885
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D G P LS ++ ITV D+NDN P F + +Y
Sbjct: 886 -----------------HYFFGVEARDYGMPPLSATASVTITVMDVNDNRPEFLQKEY 926
>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]
Length = 3475
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G+ F I+ TG + L ALDR
Sbjct: 618 ITVRAYDADSPPFNS---QVRYFLKEGDTDYFKINASTGEISLLRALDR----------- 663
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++E +T++A D G+P L+ T+++ V+D ND+ P F+R Y
Sbjct: 664 --------------ELQEEYILTLVAMDTGSPPLTGTGTVRVVVQDTNDHSPEFERQSY 708
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 30/111 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
M + A+D D P NG Y ++ G R K F+++K TG+++T+ ++DR
Sbjct: 1886 MTLSASDPDLPPNGAPFTYHLV---GGRHKSFFTLEKHTGVLRTVRSIDR---------- 1932
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E ++ + V EDNG+P++ T+ + V D ND+
Sbjct: 1933 ---------------ETTAQLELLVEVEDNGSPRMRTQHTILVNVIDQNDS 1968
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 176 RLDYEEVQHYILVVQAQDNGFPSLSSTLTVYCNVIDLNDNAPIFDPMSY 224
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 73 PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P E +TV+A DNG P + C + + + D N+N P+F + Y
Sbjct: 1298 PSPENMFSLTVLATDNGKPPMYTECLVNVNIVDANNNPPVFSQTSY 1343
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 36/124 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK------FSIDKETGIVKTLYALDRDDPERE 54
M + A D D NG ++Y++ ER+K F++ G+++ +LDR
Sbjct: 374 MAIKAVDRDEGRNG-YVEYQL----DERSKDGTVVPFAVGPADGLLRVSGSLDR------ 422
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
EI D++V A DR DP + + I +I V D NDN P+FD
Sbjct: 423 -EIKAAYDLQVVAKDRGDPSKSTQSRI------------------RINVLDENDNSPIFD 463
Query: 115 RVQY 118
QY
Sbjct: 464 PKQY 467
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 29/115 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG I Y + + F I+ +TG + T LDR+ E Y
Sbjct: 1045 KVSATDADSDENG-QITYHLRD---DFEAFEINTDTGEIYTTVRLDRE----EMAFYT-- 1094
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+TV A D G PQL+ + + + V D NDN P F R+
Sbjct: 1095 -------------------LTVDAVDQGVPQLTGSAAVLVNVLDKNDNPPKFTRL 1130
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD P G ++Y ++K G+ KF++++ETG++K LDR+ + T
Sbjct: 9 RITATD---PDTIGKLEYTLLK--GDTTKFALERETGLLKLRDTLDRESVSSYRLTVSVT 63
Query: 62 D--------IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D I VQ ERE + + +G PQ V D NDN P+F
Sbjct: 64 DGIQSTETTITVQLETNGRLEREPTAAV-ADSRGHGGPQHP--------VTDTNDNPPVF 114
Query: 114 DRVQY 118
Y
Sbjct: 115 AEPAY 119
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D +NG I++ I R F+I +++G+V+ L+ + K +Y T
Sbjct: 507 VSATDIDEGANG-RIRFSIAAGDDNR-DFTISEDSGVVRVAKNLNFE----RKSLYTIT- 559
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+R + D D G D + IT+ DINDN P F
Sbjct: 560 VRAEDCAGD--------------TDGGAEVRFDTARLSITITDINDNPPTF 596
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 28/108 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N Y II + + F ID ++G ++T LDR+ K I
Sbjct: 1788 DVRPQNN--QFSYSIIGGNNDHS-FKIDPQSGQIETARLLDREKIPVHKLI--------- 1835
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V A D G P + ++IT+ DINDN P F+
Sbjct: 1836 ----------------VGAIDTGVPPQTGTTLVQITLSDINDNGPTFE 1867
>gi|348565657|ref|XP_003468619.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Cavia
porcellus]
Length = 4527
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + ALD
Sbjct: 3227 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVSEALDY------------ 3272
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3273 -------------ESCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNPPKFSQDVY 3317
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ++D+D N + Y+I++ F ID +G++ T LD
Sbjct: 2278 LQVVSSDIDS-GNNKMVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2325
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS+ + I + DINDN P+F+++ Y
Sbjct: 2326 --------------ELVQHCTLKVRATDNGFPSLSNEVLVHIHISDINDNPPVFNQLIY 2370
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3336 AEDVDSQPNG---QIRFSIVSGDRDNEFAVDPVLGLVKVKKKLDR--------------- 3377
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D G P +S T+ I + D+NDN P+F Y
Sbjct: 3378 ----------ERVSGYSLLVQAVDGGIPAMSSTATVNIDISDVNDNSPVFTPANY 3422
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ LDR
Sbjct: 1034 LQVTAQDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADILDR------------ 1079
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I +ED+NDN P+
Sbjct: 1080 -------------ETTGSYWLTVYATDRGVVPLYSTLEVYIEIEDVNDNAPL 1118
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 24 APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITV 83
A FSID +GI+ LDR+ + +I V+A D+ PER
Sbjct: 3142 ATSANGFFSIDSTSGIIILEQPLDREQQS-------SYNISVRATDQS-PER-------- 3185
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ ITV DINDN P+F+R Y
Sbjct: 3186 --------SLSSIATIMITVLDINDNPPVFERRDY 3212
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1767 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1812
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1813 -------------ETIAHFHFHVHVRDSGSPQLTADSPVEVNIEVTDVNDNPPVFTQAVF 1859
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I +ED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINIEDANDNSPIFLQDSY 836
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV ATD+D +NG + E+ F+ID TG + TL LD
Sbjct: 2806 QVRATDMDWGANGQVTYSLHSDSHPEKVMEAFNIDSNTGWISTLKDLDH----------- 2854
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + +V+A D G LS + + V DINDN P+F Y
Sbjct: 2855 --------------ETDPAFSFSVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVY 2900
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Query: 29 AKFSIDKETG-IVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDP 73
A +D E G ++ + A+DRD + Y+ D I +A + D
Sbjct: 2062 AAVQVDAEPGTLIYRVTAIDRDKGANGEVTYVLQDDYGHFEINPNSGNVILKEAFNSDLS 2121
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E+ TV+A+D G P LS + + IT+ +N P+FD+ Y
Sbjct: 2122 NIEYEV--TVVAKDGGKPSLSTSVELPITI--VNKAMPVFDKPFY 2162
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2487 IHIRATDGDPGTYG-QISYAIINDFA-KDRFLIDSNGQVITT---------ER------- 2528
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E ++ I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2529 -------LDRENP-LEGDVSIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFLTVEY 2576
>gi|32810968|gb|AAP87554.1| cadherin-like protein cad2 [Aplysia californica]
Length = 736
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + AT +D N I Y I A E+ KFSID G++ LD
Sbjct: 617 IXITATSLDIGXNAD-ITYSI-AAGNEQGKFSIDPNKGVLVVTEPLDH------------ 662
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E +E +ITV+A D GTP L+D + I + D+NDN P F +
Sbjct: 663 -------------ELAREYFITVLATDRGTPPLTDTAIVSINITDVNDNPPRFSQ 704
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 32/109 (29%)
Query: 7 DVDPPSNGGTIQYRI-IKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
D D PS T+ R+ GE A F IDKETG+++T LDR
Sbjct: 413 DADAPS---TVNSRVSYSLTGEGADHFLIDKETGLIRTAKLLDR---------------- 453
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + E +T +A D G LS + I ++D+ DN P F
Sbjct: 454 ---------ETQPEFELTAVARDGG--GLSCTTLVLIYLKDVXDNAPTF 491
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSI ++GIV + AL R ER +TV+A + +
Sbjct: 540 FSIHPDSGIVSLIAALGR-------------------------ERNPSYNLTVVAYNPIS 574
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P T+ +TV D+NDN P F Y
Sbjct: 575 PTSPRKLTIMVTVLDVNDNPPEFQHSSY 602
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK---FSIDKETGIVKTLYALDRDDPEREKEI 57
+Q+ A+D D +N + PG +A FSID ++G + L LDR E + +
Sbjct: 190 IQLQASDRDLQTN----PLKFTLGPGMQAMASIFSIDAKSGWIMLLTKLDR---ETQSQY 242
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+T + + + + P L+ ++ ITV D NDN P F++
Sbjct: 243 NLT-------------VVVSDSPSSSLRKSGQYPSLTTTTSVLITVTDCNDNPPAFEKQN 289
Query: 118 Y 118
Y
Sbjct: 290 Y 290
>gi|149020622|gb|EDL78427.1| FAT tumor suppressor homolog 3 (Drosophila) [Rattus norvegicus]
Length = 2306
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + L ALD
Sbjct: 1006 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVLEALDY------------ 1051
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 1052 -------------EMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 1096
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 1115 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 1156
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 1157 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 1201
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N + Y+I++ F ID +G++ T LD
Sbjct: 57 LQLVSTDADS-GNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 104
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 105 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 149
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS ++ ITV DINDN P+F+R Y
Sbjct: 941 QPLDR---EQQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDY 991
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T
Sbjct: 266 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT------------------ 305
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR++P E +I I + A D G + CT+++ V D NDN P F ++Y
Sbjct: 306 -----ERLDRENP-LEGDISIYLRALDGGGR--TTFCTVRVIVVDENDNAPQFMTLEY 355
>gi|327286490|ref|XP_003227963.1| PREDICTED: cadherin-related family member 2-like [Anolis
carolinensis]
Length = 2278
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ ATD D P +N +Q+ I+ PGE + F+I+ +TG++K+ DR+ E
Sbjct: 709 VEIQATDKDDPDTNNSRLQFEIL--PGEFSSNFTINPDTGVLKSKGPFDREAIPLE---- 762
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +T++ D G PQL+ + VED+NDN P F+ Y
Sbjct: 763 ----------------LNGKVVVTILVHDLGIPQLNTTVNVTFLVEDVNDNAPRFNSSFY 806
>gi|410933153|ref|XP_003979956.1| PREDICTED: protocadherin gamma-B7-like, partial [Takifugu rubripes]
Length = 923
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 401 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 447
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + AED G P++S + ITV D+NDN P+F + Y
Sbjct: 191 DREKQEQISLVLTAEDGGEPRMSGTMLIIITVLDVNDNAPVFTQSTY 237
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++I + + A D G P++S + ITV D NDN P+F + Y
Sbjct: 739 DREKQEQISLVLTAVDGGEPRMSGTMLIIITVLDANDNAPVFTQSTY 785
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 550
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 29/110 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D +N I Y I A G K F I+KE G +I +
Sbjct: 254 VTASDADDGANN-KITYSITNALGNVKKLFDINKENG-----------------QISLIG 295
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D+ D E+ + I ++A D G L+D+C + + V D+NDN+P
Sbjct: 296 DM--------DFEKYQHFQINLLASDEGG--LTDSCKLIVDVRDVNDNKP 335
>gi|348519324|ref|XP_003447181.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2850
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D +NG ++Y ++ F I +TG++ T DR
Sbjct: 730 LQVHAVDADEGANG-KVKYGLMHRDSAMPAFRIHPDTGVIVTARRFDR------------ 776
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ITV A D L C + I + D NDN P F+ ++Y
Sbjct: 777 -------------ERQREYSITVTATDWAEEPLIGICQLTIQILDQNDNSPKFENLRY 821
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 43 LYALDRDDPEREKEIYIT------TDIRVQ----------ALDRDDPEREKEIYITVIAE 86
LY D+D PE+ Y++ TD +Q AL R D ER+ E ++ VI
Sbjct: 1706 LYVTDKDSPEQGPPFYLSLPSVYSTDFHLQDHGNGSATLTALRRFDRERQSEFHLPVIMI 1765
Query: 87 DNGTPQLSDACTMKITVEDINDN 109
D+G P ++ T+ IT+ D NDN
Sbjct: 1766 DSGEPPMTATNTLTITIGDHNDN 1788
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + + G+ F ID E GI+ T DR+ + Y+
Sbjct: 1048 LQVSAHDKDLGLNGEITYSLLSDSSGDHNLFRIDSELGIIYTEAVFDRE----ARSSYL- 1102
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VQ+ D + R + N P +D +++ + D+NDN+P+F + Y
Sbjct: 1103 --LEVQSEDGQESARPGK---------NKQPN-TDTAYVRVFISDVNDNKPVFAQRLY 1148
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG I Y I+ F++ G+V LDR
Sbjct: 1594 IQVVASDSDSGPNG-DISYSILPESDPYGHFAVSG-AGVVTVARPLDR------------ 1639
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E + V+A D GTP LS + T+++ + D+NDN P
Sbjct: 1640 -------------ETVAGYELVVMATDRGTPPLSGSVTVRLPLLDVNDNGP 1677
>gi|170048314|ref|XP_001870677.1| cadherin [Culex quinquefasciatus]
gi|167870411|gb|EDS33794.1| cadherin [Culex quinquefasciatus]
Length = 3527
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V AT D N I Y II E KF+++ TGI+ LD
Sbjct: 1995 LKVLATSKDTGINA-EINYSIIGG-NEHRKFAMNNRTGILSLADTLDY------------ 2040
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER K+ ++T+ A D GTP LS+ T+ I+V D NDN P F + Y
Sbjct: 2041 -------------ERAKDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNPPQFTQNSY 2085
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 27 ERAKFSI--------DKETGIVKTL-YALDRDDPEREKEIYI-TTDIRVQALDRDDPERE 76
ERA+F D +TGI + + YAL D + ++ TD + D E
Sbjct: 1050 ERAQFGTAILKVQAKDNDTGINQVVTYALQTDSKNTSEYFHMDATDGVIYLKKSLDHETL 1109
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ TVIA D G P LS + ++V D+NDN P F++ Y
Sbjct: 1110 SHHHFTVIASDRGVPSLSSTAHVWVSVLDMNDNPPKFEQPSY 1151
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y+I + G+R +F+I+ ETG + LDR
Sbjct: 2100 LQVRANDMDAEENG-RVSYKIER--GDRMGQFAIEPETGYISVAGTLDR----------- 2145
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A DNG P L+ + I + D NDN P+F
Sbjct: 2146 --------------ESISNYVLEVQARDNGLPTLTAYVLVNIEISDANDNPPIF 2185
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y I + R F I ++GIV LDR+
Sbjct: 1892 KIHATDADIGVNR-KIKYSFIDS--YRDHFRIAPDSGIVTLSKPLDRE------------ 1936
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+AL +TV A D G P L ++ + + V+DINDN P F Y
Sbjct: 1937 ---VKALYN----------LTVRATDQGKPSLFNSAFLIVNVQDINDNPPEFTSKHY 1980
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
M++ A D D SNG I+Y + G+ F +D TG + TL LD+
Sbjct: 1579 MKLTARDSDSGSNG-DIRYSLSADVGDIVNIFDVDAYTGWITTLVPLDK----------- 1626
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ VIA DNG P+ + T+ I ++D ND P F +Y
Sbjct: 1627 --------------EKREDYKFQVIATDNGQPKHATRTTVIIRLKDYNDCPPTFKESRY 1671
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D+D P+N + R F++DK++G +KT LDR E + + +T
Sbjct: 1787 LQIQANDIDEPANS---RLRFYLTGNGAEDFNLDKDSGQLKTARQLDR---ETQSKYQLT 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E I ++ V D+NDN P F Y
Sbjct: 1841 AHVQ----DRDHPGWECSSQIVIV------------------VTDLNDNPPEFSLNPY 1876
>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
Length = 3197
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 489 VRVTARDPDQGTNG-QVTYSL--APGTHTHWFSIDPTSGIITTAASLDY----------- 534
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 535 --------------ELEPRPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 579
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG Q GE FS+D +TG++ TL ALDR
Sbjct: 1568 LTLRATDPDLGPNG---QVTYGGVSGE--NFSLDPKTGVLTTLRALDR------------ 1610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L T+++ +ED ND+ P F
Sbjct: 1611 -------------EEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPTF 1650
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1122 QVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1167
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ I V D+NDN P F
Sbjct: 1168 ------------EQQSSFQLLVQVQDGGSPPHSTTGTVHIAVLDLNDNSPTF 1207
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2090 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2141
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T I + A DR G+P L + T+ + V D NDN P
Sbjct: 2142 TRIVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2174
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F + Y
Sbjct: 2460 DFESLTQYNLTVAAADRGQPSRSSAVPVTVTVLDVNDNPPVFTQASY 2506
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + Y
Sbjct: 1503 VRPLDR---EQRAEHILTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFQQQDY 1553
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+ E++ Y + V A D+G+P L + + D+NDN P FDR Y
Sbjct: 424 RQLDRE----ERDAYNLRVTATDSGSPPLRAEAAFVLHITDVNDNAPTFDRQLY 473
>gi|405951763|gb|EKC19648.1| Protocadherin-9 [Crassostrea gigas]
Length = 1002
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D +N + Y + ++ F ID+++GI++T LDR
Sbjct: 480 VHVQANDADDKNNADLL-YSLSES--NNGMFYIDEKSGIIRTQARLDR------------ 524
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + VIA D G P LS + T+ I+V D NDNEPMF++ +Y
Sbjct: 525 -------------ENVSSYSVIVIARDQGDPALSGSATVIISVLDKNDNEPMFNQSRY 569
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T D +ALDR E ++I++TV +D+G P L+ + + + +ED NDN P+F
Sbjct: 407 NKEFKVTVD---RALDR---ELYQQIHVTVFCKDSGMPPLNTSDSFYVEIEDENDNAPIF 460
Query: 114 DRVQY 118
D Y
Sbjct: 461 DLSVY 465
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 54 EKEIYITTDIRV---QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+K++ T+ +R+ +AL+R E+ + +V+A D G+P LS + IT+ D+NDN
Sbjct: 185 QKKLDGTSIVRLIVKEALNR---EQRDNYHFSVVARDGGSPPLSGTLKVNITISDVNDNS 241
Query: 111 PMFDRVQY 118
P F + Y
Sbjct: 242 PKFSQSVY 249
>gi|260798696|ref|XP_002594336.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
gi|229279569|gb|EEN50347.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
Length = 2488
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D SNG + Y I+ F+ID ++G + T DR
Sbjct: 433 IQVTASDADQGSNG-RVTYSIVHREDSETMFNIDADSGEISTAVVFDR------------ 479
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +E +TV A DN L C + + + D+NDN+P+F+ +Y
Sbjct: 480 -------------EERREHAVTVTATDNADNPLIGVCQLIVHITDVNDNDPVFENNKY 524
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 20/121 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPG----ERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
QV A D D + G + Y I P + KF ID TG V T DR+ +K
Sbjct: 752 QVTAVDADT-GDAGKVTYSISPDPDPSLRDWEKFRIDPSTGEVFTKDMFDRE----KKSF 806
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
Y+ + V+A D +R + + + P +A ++I++ D+NDN P F R Q
Sbjct: 807 YL---LEVKAEDGAVSDRVELSNVNI-------PNSREA-YVRISISDVNDNSPTFPRTQ 855
Query: 118 Y 118
Y
Sbjct: 856 Y 856
>gi|357614378|gb|EHJ69045.1| fat protein [Danaus plexippus]
Length = 1382
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 25 PGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYITTDIRVQALDRDDPEREKEIYITV 83
P + F ID G +KTL + DR++ + + YIT +TV
Sbjct: 789 PIAQNDFRIDSRNGFIKTLKSFDRENLSQNSGQNYIT--------------------LTV 828
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG +LSD+ + I V D+NDN P+F R Y
Sbjct: 829 TVSDNGKVKLSDSVRVTIYVTDVNDNSPIFTRTPY 863
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q HA D D N +QY I + F ID +G E+++
Sbjct: 984 IQFHANDADLGINN-ELQYSITSG-NRKETFFIDSYSG-----------------ELFLH 1024
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ D E + + A DNG P LS + T +TV D NDN P+F
Sbjct: 1025 KHL--------DYEDLTSYVLNITATDNGNPSLSSSITFTVTVIDANDNAPIF 1069
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
E +YI + V LDR++ + +TV+A D GTP + + I V D+ND+E
Sbjct: 376 ENSSSVYI---VHVNGILDREEISKYN---LTVVATDKGTPPRTATSFLVIHVNDVNDHE 429
Query: 111 PMFDRVQY 118
P+F++ +Y
Sbjct: 430 PVFEKSEY 437
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V+++D D NG + Y++I + KF +D+ TG +++I
Sbjct: 878 MRVYSSDADEGLNGD-VYYKLIGG-DDLGKFVLDEATG-----------------QLFIN 918
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
+ LDR E +TVIA D+G T +LS + + V D NDN P+F++ Q
Sbjct: 919 -----KPLDR---ESIDHYVLTVIAHDSGQTTRLSSTTIITVDVLDENDNAPVFEQSQ 968
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 33/118 (27%)
Query: 3 VHATDVDPPSN-GGTIQYRIIK---APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
V T DP S G + Y I + G+R F+I+ TG++ TL +DR+
Sbjct: 1089 VTVTAEDPDSGWNGKVYYSITHQDPSNGKR-HFAINNVTGVIYTLLPIDRE--------- 1138
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT---VEDINDNEPMF 113
I R ITV+A D P S C+ K+ VEDINDN P+F
Sbjct: 1139 IIDTFR----------------ITVVACDKAEPASSRLCSEKLVTVIVEDINDNAPVF 1180
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N + Y++ G F ++ E G + LDR+ EK+ Y
Sbjct: 665 LQVKAFDLDEGDNSKVV-YKL--ESGGEGYFDVEPENGYIYVKSPLDRE----EKDYY-- 715
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T++A D+G P S + I V D NDN P F +
Sbjct: 716 -------------------SLTIVASDHGKPSRSSQVPVVIHVLDENDNSPQFTNTTF 754
>gi|301608213|ref|XP_002933685.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
tropicalis]
Length = 801
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ L R D E E IT+IA+D GTP LS M++ + D+NDN P+F++ Y
Sbjct: 393 KIVTLSRMDRETIPEYNITIIAKDKGTPSLSSTKIMQVILTDVNDNIPVFEKANY 447
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE----RAKFSIDKETGIVKTLYALDRDDPEREKE 56
++V+A D+D NG I Y II + + SI+ TG++ L+ D
Sbjct: 462 LRVNALDLDINENG-QIVYSIINTDIQDISISSHVSINSGTGVIYALHGFDY-------- 512
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ +E V+A+D+G P LS T+++ + D NDN P
Sbjct: 513 -----------------EQMREFQFQVMAKDSGIPSLSSNATIRVCITDKNDNSP 550
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++ I +++ A D G+P+ + +KI V D NDN P F + Y
Sbjct: 191 DREKQSSIELSLTASDGGSPRKTATALIKIVVLDANDNYPAFSQDTY 237
>gi|410899192|ref|XP_003963081.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Takifugu rubripes]
Length = 2908
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D SN + Y II R +FSID TG ++ + LD
Sbjct: 281 LRVSATDRDKDSNAA-VHYNIISG-NSRGQFSIDSVTGEIQVVAPLDY------------ 326
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
E E+E + V A+DNG P LS+ + + V D+NDN P+F
Sbjct: 327 -------------EAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIF 367
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N ++YR+ + F I+ TG V ALDR+ E
Sbjct: 387 LHIQAIDTDSGDNA-RLEYRLTGTSSD-TPFIINSATGWVTVRSALDRESVE-------- 436
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP LS ++ ITV D+NDN P F + +Y
Sbjct: 437 -----------------HYFFGVEARDYGTPPLSATASVTITVMDVNDNRPEFLQKEY 477
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ ATD D P+N I+YR I RA F ID +G++ T +DR+ E
Sbjct: 171 LQLRATDSDSPTNA-NIRYRFIGDMVAVARAAFEIDPRSGLITTRGVVDRELNEH----- 224
Query: 59 ITTDIRVQALDRDDPEREK----EIYITVIAEDNGTPQLSD 95
++V+A D+ + +++ITV+ E++ PQ S+
Sbjct: 225 --YTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSE 263
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GI++T+ LDR+ P E
Sbjct: 697 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGILRTVRRLDRESVPFYE----- 750
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P +++TV D+NDN P+F
Sbjct: 751 ---------------------LTAYAVDRGVPPQRTPVHIQVTVLDVNDNAPVF 783
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
A+D DP + G ++Y + R+ F I ++TG++ T LDR+ +
Sbjct: 67 ASDPDP-GDAGRVRYTMAPLMNSRSSDYFHIHQDTGLITTTQILDREHMDLH-------- 117
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y V A D G+ +LS + ITV D ND+ P+F++ +Y
Sbjct: 118 -----------------YFRVTATDYGSARLSGTTMVAITVSDRNDHSPIFEQTEY 156
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A+DNG PQ SD +++ V D+NDN P F +Y
Sbjct: 636 DYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRY 682
>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur
garnettii]
Length = 3374
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T LD
Sbjct: 569 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTSALLDY----------- 614
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P LS + T+ + ++D+NDNEP F R Y
Sbjct: 615 --------------ELEPQPQLIVVAMDGGLPPLSSSATVSVALQDVNDNEPQFQRTFY 659
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D +TG++ TL ALDR
Sbjct: 1745 LTLRATDPDLGANG---QVTYGGVSGE--NFSLDPDTGVLTTLRALDR------------ 1787
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P T+++ VED ND+ P F
Sbjct: 1788 -------------EEQEEINLTVYARDRGSPPQLTHVTVRVAVEDENDHTPTF 1827
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E++ E +TV+A D+G+P S + I+V D+ND P F + +Y
Sbjct: 1680 VRPLDR---EQQAEHILTVVASDHGSPPRSATQVLTISVADVNDEAPAFQQQEY 1730
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2267 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2318
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2319 TRLVLMATDR------------------GSPSLVGSATLTVMVIDTNDNRP 2351
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D NG + Y + + + F I +TG + TL LDR
Sbjct: 1202 RIFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEMTTLQILDR------------- 1247
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G P S T+ I V D+NDN P F
Sbjct: 1248 ------------EQQSSYQLLVQVQDAGNPPRSTTGTVHIAVLDLNDNSPTF 1287
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +T+ D+NDN P+F + Y
Sbjct: 2637 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASY 2683
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 505 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 553
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D ++G T+ LDR
Sbjct: 1848 LRASDPDMGANG-QLQYRILDGDPSGA-FVLDLDSGEFGTMRPLDR-------------- 1891
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1892 -----------EVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAF 1931
>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
Length = 3260
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + YR++ + R F +D + G TL+
Sbjct: 2353 ITVTATDRDSGENG-KVSYRVLSS--TRDGFYVDPKNG---TLF---------------- 2390
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IR +A + DPE E + I + A D G+P LS + T+++ + D+NDN P+F +++Y
Sbjct: 2391 --IRQKA--KFDPE-EPSVSIVIEARDGGSPPLSSSATVQVQLMDVNDNAPIFHQLEY 2443
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + YRI ++ +F + +G + L LDR+
Sbjct: 1525 LYVMAWDADQGENG-RVSYRI-QSGNTAGRFVLSSNSGSLSILKPLDRE----------- 1571
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E Y +T++AED+G PQ S + I V D+ND P F+R ++
Sbjct: 1572 ---------------EQESYNLTIVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFERNEF 1615
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G ++Y+I KA F +D +G + T LDR E
Sbjct: 1744 GRLEYKI-KAGDPDGDFRLDGSSGALSTSRPLDR-------------------------E 1777
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+ + V+ +D+G+P L+ +++I+V D+NDN P F Y
Sbjct: 1778 RKSSYSLQVVVQDHGSPSLNSTASVEISVLDVNDNSPKFSSSSY 1821
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 29/116 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + YR++ +R F I+ +TG + T ALDR
Sbjct: 1097 RVSATDRDAGLNS-RLTYRLLHT--DR-YFQINSQTGEISTRAALDR------------- 1139
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E + + V+ +D GTP S T ITV D NDN P F Q
Sbjct: 1140 ------------EHQSSYQLMVVVQDGGTPPRSATGTAHITVLDENDNAPAFSHTQ 1183
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E + F +G V + ++ E + T + A +R D E +TV
Sbjct: 2470 ENSGFDFAIASGNVGNAFQIESSVRFIEGHGFQTVGTLILA-ERLDFEALSHYNLTVSVS 2528
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D G PQ S + ITV D+NDN P+F R +Y
Sbjct: 2529 DRGVPQRSSSVPAIITVTDVNDNPPVFGRAEY 2560
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG I+Y I+ + F+ID TGI+ T LD + +
Sbjct: 455 LQVTARDKDQGPNG-DIRYSILPDKKTHSSWFTIDPVTGIITTATKLDYETIPKPS---- 509
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+A D G P LS ++I ++D NDNEP+F Y
Sbjct: 510 ---------------------IKVVATDGGRPPLSSTAVVEIDLQDTNDNEPVFGSSFY 547
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 35/123 (28%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
+QV A + DP NGG T+ YR+ + G+ F I ++G + ALDR+
Sbjct: 983 LQVRALNRDPNGNGGSSTPTSTLAYRL-RPDGDAVGFGIAPDSGWLFVKSALDRE----- 1036
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPM 112
K+IY+ + +G+ Q+ + + T++++V D NDN P
Sbjct: 1037 ---------------------VKDIYLLTVLATSGSGQMGRTGSATIRVSVTDENDNAPR 1075
Query: 113 FDR 115
F +
Sbjct: 1076 FSQ 1078
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 66 QALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E++ Y + V+A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 391 QILDRE----ERDSYELRVMATDSGTPPLHAESSFTIHVTDVNDNPPLFDQQAY 440
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A DVD NG + Y I++ + F ID +TG + T +DR EI+
Sbjct: 2148 IQVVAEDVDQGQNG-QVTY-TIESSNQSGLFKIDPQTGSITTTAIMDR-------EIWTQ 2198
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A DR G+P+L T+ + + D+NDN P
Sbjct: 2199 AKLVIKATDR------------------GSPKLVGTATITVIIVDLNDNSP 2231
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D +NG + Y + G F+I+ ETG++ LDR
Sbjct: 1630 IQVTASDRDHGTNG-LVTYGGVTEDG----FTINAETGVISATRVLDR------------ 1672
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ITV A+D G P + ITV D NDN P F QY
Sbjct: 1673 -------------ELQDHYTITVYAKDGGIPPNFAKAKVHITVLDENDNAPAFGLQQY 1717
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D NG + + +I + G+R F +++ +G V+ + +L D R
Sbjct: 879 RVQAEDRDSGPNG-QLSFDLISSGGQRT-FGVERSSGEVRLIGSLSYDSVPRYD------ 930
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VIA+D+G PQLS ++ + ++ N+ P+FD + Y
Sbjct: 931 -------------------LQVIAKDSGAPQLSATFSLVVHIQAENNQGPVFDTITY 968
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
++V A D D S G TI Y I + AP ++FSI+KE+G + T ALDRD
Sbjct: 562 LEVKADDADGGSFG-TITYSIGSGSVSAP--LSQFSINKESGQICTSTALDRD------- 611
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E + TV A D G LS + ++ +++EDINDN P F +
Sbjct: 612 -----------------EGADSFHFTVTATDGG--GLSSSASVLVSLEDINDNRPSFYPL 652
Query: 117 QY 118
Y
Sbjct: 653 NY 654
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ + V A D G+P+ + T+ I V+DIND+ P+F++ +Y
Sbjct: 177 DREKRSSYSLVVEAFDGGSPRQNGQMTLDILVQDINDHAPVFNQSRY 223
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATDVD NG + + +A G F++D TG + T LDR E+ + +
Sbjct: 1840 ATDVDEGQNGQILYFLSQEAKG---AFTVDPNTGRITTAALLDR---EKRASYFF----Q 1889
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V A+D ++ A N T Q++ +T+ D+NDN P F
Sbjct: 1890 VYAVD-----------LSPAAPRNSTAQVT------VTILDVNDNAPFF 1921
>gi|47220482|emb|CAG03262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4006
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D SN + Y II R +FSID TG ++ + LD
Sbjct: 1166 LRVSATDRDKDSNAA-VHYNIISG-NSRGQFSIDSVTGEIQVVAPLDY------------ 1211
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
E E+E + V A+DNG P LS+ + + V D+NDN P+F
Sbjct: 1212 -------------EAEREYTLRVRAQDNGRPPLSNNTGIVSVQVTDVNDNPPIF 1252
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
A+D DP + G + Y + R+ F I ETG++ T LDR+ +
Sbjct: 952 ASDPDP-GDAGRVSYSMAPLMNSRSSDYFHIHPETGLITTTQTLDREHMDLH-------- 1002
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y V A D G+ +LS + ITV D ND+ P+F++ +Y
Sbjct: 1003 -----------------YFRVTATDYGSSRLSGTTMVAITVSDRNDHSPIFEQTEY 1041
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ ATD D P+N I+YR I RA F ID +G++ T +DR+ E
Sbjct: 1056 LQLRATDSDSPTNA-NIRYRFIGDMVAVARAAFEIDPRSGLITTRGVVDRELNEH----- 1109
Query: 59 ITTDIRVQALDRDDPEREK----EIYITVIAEDNGTPQLSD 95
++V+A D+ + +++ITV+ E++ PQ S+
Sbjct: 1110 --YTLQVEASDQGKEPGPRSATVKVFITVLDENDNVPQFSE 1148
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N ++Y++ + F I+ TG V LDR+ E
Sbjct: 1272 LHIQAIDTDSGDNA-RLEYKLTGTSSD-TPFIINSATGWVTVRSTLDRESVE-------- 1321
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP LS ++ ITV D+NDN P F + +Y
Sbjct: 1322 -----------------HYFFGVEARDYGTPPLSATASVTITVMDVNDNHPEFLQKEY 1362
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A+DNG PQ SD +++ V D+NDN P F +Y
Sbjct: 1521 DYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRY 1567
>gi|405971222|gb|EKC36072.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1006
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A+D D N + Y I P R+KF +D TGI++ DR
Sbjct: 481 KVTASDSDQ-ENNAEVHYAI--EPNFRSKFEVDSSTGIIRAKVEFDR------------- 524
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E+E I V A DNGTP L+ T+K+ +ED ND P F++ Y
Sbjct: 525 ------------EQESSITFKVYAADNGTPVPLTATATVKLNIEDDNDEFPTFNKSSY 570
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ Q LDR E+ + + ++A+D G PQ S T+ + V+DINDN+P F QY
Sbjct: 200 VLTQKLDR---EKVRSYRVYLVAKDGGLPQRSSTMTINVAVQDINDNKPRFSYSQY 252
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD----------- 49
+ +H DV N + I G + S +K T ++ + +DRD
Sbjct: 341 INIHVVDV----NNHAPEININLLSGGKVSESSNKGT-VIAYVAVVDRDTGKNGQVKCKI 395
Query: 50 -DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
P+ + + T+ +V D D E E + V ED+G P+ + + + + V D ND
Sbjct: 396 IHPKFQLHVLSNTEYKVVVSDELDREENIEYIVKVYCEDDGIPKQNKSKSFIVQVLDTND 455
Query: 109 NEPMFDRVQY 118
NEP FDR Y
Sbjct: 456 NEPKFDRDLY 465
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP-GERAK-FSIDKETGIVKTLYALDRDDPEREKEIY 58
M+V A+D D NG ++Y+ P GE K FSI+ TG VK + L
Sbjct: 267 MKVSASDDDDGQNG-VVEYQFSSTPNGESQKLFSINNNTGEVKVIQQL------------ 313
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+P R I V A D+G P LS + I V D+N++ P
Sbjct: 314 --------TFTSGEPHR-----IVVSAIDHGFPALSSQAFINIHVVDVNNHAP 353
>gi|351708434|gb|EHB11353.1| Protocadherin-24 [Heterocephalus glaber]
Length = 1320
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
M + A D D P +N + + ++ P + FS+D ++G+++ + LDR+
Sbjct: 612 MIIQAYDNDEPDTNNSRLLFSLLPGPYSQ-NFSVDPDSGLLRNVGPLDREAI-------- 662
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP I +TV D G P LS + +TVEDINDN P+F++ Y
Sbjct: 663 ------------DPALGGRIVLTVRVADCGVPPLSTEVNVMVTVEDINDNLPVFNQSSY 709
>gi|332030997|gb|EGI70623.1| Protein dachsous [Acromyrmex echinatior]
Length = 680
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D N ++Y + A F+ID+ TG++ T+ +D
Sbjct: 531 IQVFAIDLDEGVNSA-VRYSLANA----TWFAIDETTGLITTVTHVD------------- 572
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 573 ------------CEANPAPILVVYATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLY 618
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RD R+ +Y+ I +LDR E ++ + A D GTP L + +TV+D+N
Sbjct: 232 RDQRGRDGVLYLDLQI-AGSLDR---EIRSRYHLVIEALDGGTPPLRSHLNVNVTVQDVN 287
Query: 108 DNEPMFDRVQY 118
DN P+F++ +Y
Sbjct: 288 DNPPVFNQTRY 298
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+ATD D NG I+Y I + +R + F ID ETG+V ALD + ER +
Sbjct: 313 LAVNATDADAGDNG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHE---- 367
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + I V D+NDN+P
Sbjct: 368 ---------------------LVIVARDRGAQPLEASTFLSIRVTDVNDNQP 398
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+ +Y ++V A D GTP L T ++ V D+NDN P F+ +Y
Sbjct: 469 LDRE----EQSVYELSVEATDAGTPPLCAERTFRLLVTDVNDNAPKFEHERY 516
>gi|195113383|ref|XP_002001247.1| GI10681 [Drosophila mojavensis]
gi|193917841|gb|EDW16708.1| GI10681 [Drosophila mojavensis]
Length = 817
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD---DPEREKE 56
+QV A D+D + I Y I++ R F+ID E+G+++ L+ D + D R
Sbjct: 631 LQVEARDLDLNGTENSQITYEIVEGL-YRMNFTIDPESGLIRPLHYFDYEELVDSHRHAV 689
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D+R EI + V A D+G P LS + I ++D+NDN P+F +
Sbjct: 690 RQTNADMR-------------EIDLLVRARDSGIPMLSTVVPVLIYLQDVNDNPPIFQKS 736
Query: 117 QY 118
Y
Sbjct: 737 FY 738
>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
Length = 2531
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG ++Y ++ G F I +TG++ T+ DR
Sbjct: 443 LQVEATDADEGANG-IVKYGLMHRDGVLPAFRIHPDTGVLTTVQVFDR------------ 489
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E +TV A D L C + + + D NDN+P F+ +Y
Sbjct: 490 -------------EKQREYPVTVTATDQAAEPLIGMCQINVLILDQNDNDPRFENTRY 534
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG + G+ F +D +TG + T DR+ +K Y+
Sbjct: 761 IQVSATDLDLGQNGEITYSMLHDHSGDYTCFRLDSQTGSIYTTSVFDRE----KKGSYL- 815
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+++D + R + +G P SD +++ + D+NDN+P+F + Y
Sbjct: 816 --LEVESVDGSESARPGK---------HGRPN-SDTAYVRVFITDVNDNKPVFTQSVY 861
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + G + Y + G F+ID+ TG + LDR++
Sbjct: 979 LQVMANDPDNNVDEGDLSYSL-HGHGAADIFTIDENTGSIYAHKVLDREE---------- 1027
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+AL R V+A D G L+ + I V DINDN PMF
Sbjct: 1028 -----RALWR----------FVVLATDEGGEGLTGFADVIINVWDINDNAPMF 1065
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ DK++G+ + + D + ++ I V ++ D E ++ + V A D GTP
Sbjct: 1311 ATDKDSGLNGNIIYSIKSDSDPMRQFVIDQHGHVIVANKLDREVIQKYSLIVQASDQGTP 1370
Query: 92 QLSDACTMKITVEDINDNEPMFD 114
+ + T+ I + D+NDN P F+
Sbjct: 1371 AETGSVTVLINLLDVNDNGPRFE 1393
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V AL D E++K ++ ++ D+G P +S T+ IT+ D NDN
Sbjct: 1459 VTALRSFDREKQKVFHLPIVITDSGIPVMSSTNTLTITIGDENDN 1503
>gi|410933149|ref|XP_003979954.1| PREDICTED: protocadherin gamma-A4-like, partial [Takifugu rubripes]
Length = 430
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E ITV D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 42 DRERESEYNITVSCSDEGVPSLSSSVTLTLQISDVNDNPPVFERSSY 88
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
V A+ D E+ K+ + V A+D G+P LS ++KI ++D NDN P
Sbjct: 145 VHAVRSFDYEQIKDFHFLVKAQDGGSPPLSSNVSVKILIQDQNDNPP 191
>gi|312384516|gb|EFR29227.1| hypothetical protein AND_02014 [Anopheles darlingi]
Length = 741
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D +N I Y ++ P + F ID +G++ T +D
Sbjct: 483 VQVMAIDRDEGNNSAII-YSLLDTPDTHSHWFQIDSHSGLITTRAHIDC----------- 530
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A+DNG P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 531 --------------ETDPVPRLIVLAQDNGRPPLSSTGTVLVTIHDVNDNEPIFDQSFY 575
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + V A D G+P L T+ IT++D+
Sbjct: 182 RLSSHRERDGVLYLDLQINGFLDR---ETTPAYSLLVEALDGGSPPLRGLMTVNITIQDV 238
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 239 NDNQPIFNQSRY 250
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E + ++VIA D G P L A + +TV DINDN P
Sbjct: 408 RDNIIYLV--IVSLPLDR---EIKPNYTLSVIATDTGNPPLHAAKDIFLTVTDINDNAPE 462
Query: 113 FDRVQY 118
F+R +Y
Sbjct: 463 FERDEY 468
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+ATD D NG ++Y I + ++ + F ID TG++ LD + E +
Sbjct: 265 LQVYATDQDAGENG-LVEYAINRRQSDKEQMFRIDPATGLISVNKPLDFETRELHE---- 319
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ V+A+D G L + I V D+NDN+P+ + +
Sbjct: 320 ---------------------LVVVAKDRGMQPLETTAFVSIRVTDVNDNQPIINVI 355
>gi|195391228|ref|XP_002054265.1| GJ24353 [Drosophila virilis]
gi|194152351|gb|EDW67785.1| GJ24353 [Drosophila virilis]
Length = 1974
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD---DPEREKE 56
+QV A D+D + I Y I++ R F+ID E G+++ L+ D + D R
Sbjct: 634 LQVEARDLDLNGTENSQITYEIVEGL-YRMNFTIDPEIGLIRPLHHFDYEELVDSHRHPL 692
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D+R EI + V A D+G P LS + I V+D+NDN P+F +
Sbjct: 693 RQANADMR-------------EIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNPPIFQKS 739
Query: 117 QY 118
Y
Sbjct: 740 FY 741
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D S + YRI G KF I+ ETG++ +
Sbjct: 756 LQVLAIDRDGSSPNNAVVYRI--QTGASDKFIINSETGVISVAQGAN------------- 800
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
LD D E ++ IY + V+A D G + QL + + I++ D+N+ PM
Sbjct: 801 -------LDPDLTESKRLIYTLNVLALDGGLGSSQLMNTAMVNISIRDVNNKPPML 849
>gi|113951653|ref|NP_001039292.1| protocadherin-1 precursor [Gallus gallus]
gi|50346359|gb|AAT74929.1| protocadherin [Gallus gallus]
Length = 1049
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A+D D SN + Y ++ P + F+ID ++G
Sbjct: 518 MEVSASDADSGSNAKLV-YSLVTDPSSKDSFTIDPDSG---------------------- 554
Query: 61 TDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+IRV+A LDR+ ER + V+A D G+P L ++ I V D NDN+P F
Sbjct: 555 -EIRVKAVLDREQRERYE---FLVVAADKGSPSLKGTASVAINVMDRNDNDPKF 604
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E K+ I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 457 DYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQ 500
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G Y ++ P + F + + D E++ ++ + ++ + D D
Sbjct: 193 GVASYELLAGPEAQELFGLQ-----------VAEDQEEKQPQLIVMGNLDREQWDSYD-- 239
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ +D G P + + ++IT+ D+NDN P F++ Y
Sbjct: 240 ------LTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALY 277
>gi|301615037|ref|XP_002936989.1| PREDICTED: cadherin-related family member 2-like, partial [Xenopus
(Silurana) tropicalis]
Length = 1319
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 22/119 (18%)
Query: 1 MQVHATDVDPP-SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D D P +N I++ ++ + + FS++ TG++ ++ LDR
Sbjct: 608 IQIEAFDADEPNTNNSRIEFELLPSV-LSSNFSVNVTTGLITSIGPLDR----------- 655
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A+D D I +TV D G P LS + I VED+NDN P+F + Y
Sbjct: 656 ------EAIDEKD---NGCIVLTVKLYDLGVPSLSSEVNVTINVEDLNDNVPVFSKTVY 705
>gi|326928251|ref|XP_003210294.1| PREDICTED: protocadherin-1-like [Meleagris gallopavo]
Length = 1198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A+D D SN + Y ++ P + F+ID ++G
Sbjct: 491 MEVSASDADSGSNAKLV-YSLVTDPSSKDSFTIDPDSG---------------------- 527
Query: 61 TDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+IRV+A LDR+ ER + V+A D G+P L ++ I V D NDN+P F
Sbjct: 528 -EIRVKAVLDREQRERYE---FLVVAADKGSPSLKGTASVAINVMDRNDNDPKF 577
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E K+ I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 430 DYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQ 473
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G Y ++ P + F + + D E++ ++ + ++ + D D
Sbjct: 166 GVASYELLAGPEAQELFGLQ-----------VAEDQEEKQPQLIVMGNLDREQWDSYD-- 212
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ +D G P + + ++IT+ D+NDN P F++ Y
Sbjct: 213 ------LTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALY 250
>gi|432857205|ref|XP_004068581.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Oryzias latipes]
Length = 2980
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 30/121 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P+NG I Y I+ + G F ID +G+++T +DR+ E E Y
Sbjct: 391 LTVRATDGDAPANG-NILYHILNSNGSNDVFEIDSRSGVIRTKGLVDRE----ELEAY-- 443
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT---PQLSDACTMKITVEDINDNEPMFDRVQ 117
++ V A D G P+ S T+ I VED NDN P F +
Sbjct: 444 -------------------FLLVEANDQGRDPGPR-SATATVHILVEDDNDNAPQFSEKR 483
Query: 118 Y 118
Y
Sbjct: 484 Y 484
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 814 ISATDEDIGENARITYFMDDNVP----QFDIDSDTGAVTTQMELDYED------------ 857
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 858 -------------QLSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHY 900
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A DVD + G ++Y I R+ F++D +G V T+ LDR+
Sbjct: 283 VQLKAVDVDE-GDAGRLEYFIEALFDSRSNNLFAVDPASGAVTTVEVLDRE--------- 332
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V V A D+G+P+ + T+ +TV D ND++P+F++ Y
Sbjct: 333 -TKDTHV---------------FRVTAVDHGSPRRTAMATLTVTVSDTNDHDPVFEQQDY 376
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + Y F I+ +GIV+TL LDR++ +Y
Sbjct: 915 VQVSAIDRDSGLNG-RVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDREN----VPVY-- 967
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+QA A D G P L + +T+ D+NDN P+F++ ++
Sbjct: 968 ---NLQAF----------------AVDKGVPALKTPVNIHVTILDVNDNPPVFEKDEF 1006
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 83 VIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+G P +S + ++ +T+ D+NDN P F + Y
Sbjct: 660 VEARDHGYPVMSSSASISMTILDVNDNNPEFTQKAY 695
>gi|47214524|emb|CAG04544.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2087
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I+ G + F ID + G + T + DR
Sbjct: 152 LRVQAQDADLGVNG-QVKYGIMHRDGVSSGFHIDPDAGYITTTVSFDR------------ 198
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ++V A D L C + + V D NDNEP F+ +Y
Sbjct: 199 -------------ERQREFTLSVTATDQADEPLIGICQITVLVADQNDNEPKFENSRY 243
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A+D D NG + Y I + +F +D ++G V +LDR
Sbjct: 1133 QVTASDADSGQNG-RLSYSISRQSDPLGQFLVD-QSGWVLLAGSLDR------------- 1177
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E+ + I ++A D GTP L+ + +TV D+NDN P F+
Sbjct: 1178 ------------EKTSQHRILLLATDAGTPALTGTAVLIVTVLDVNDNGPEFE 1218
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D ++ G ++Y + G +F++D+ +G ++YA R
Sbjct: 800 LQVSATDPDQEADQGALRYSL-HGQGAGGEFTVDQRSG---SIYAHRR------------ 843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ ER ++ V+A D G L+ + + V D+NDN P F
Sbjct: 844 -------LDRE--ERPTWRFL-VLATDEGGAGLTGFADVLLEVRDVNDNAPFF 886
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAK---FSIDKETGIVKTLYALDRDDPEREK 55
M++ ATD+D P+ G + Y II+ + FSI+ TG + T+
Sbjct: 912 MEMRATDLDDPNVGANAILTYSIIQNVRNQINLNLFSINGATGTIYTV------------ 959
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+++LDR++ ER V+ E L+ T I V D+ND+ P+F +
Sbjct: 960 ---------LRSLDREEAERH-----LVVVEARDGEGLAGTGTATIIVSDVNDHAPVFTQ 1005
Query: 116 VQY 118
Y
Sbjct: 1006 RLY 1008
>gi|157128514|ref|XP_001661464.1| cadherin [Aedes aegypti]
gi|108872553|gb|EAT36778.1| AAEL011164-PA, partial [Aedes aegypti]
Length = 2413
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 31 FSIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+ K+TGI + Y++ + R+ ++ T + A D D ER K+ ++T+ A D G
Sbjct: 1008 LATSKDTGINAEITYSIIGGNEHRKFAMHNKTGVLYLA-DVVDYERAKDYFLTIQAVDGG 1066
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
TP LS+ T+ I+V D NDN P F Y
Sbjct: 1067 TPPLSNLATVNISVADCNDNPPQFTANSY 1095
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 27 ERAKFSI--------DKETGIVKTL-YALDRDDPEREKEIYI-TTDIRVQALDRDDPERE 76
ERA+F D +TGI + + YAL D + ++ TD + D E
Sbjct: 60 ERAQFGTAILKVQAKDNDTGINQVVTYALQTDSKNTSEYFHMDPTDGVIYLKKSLDHETL 119
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ TVIA D G P LS + ++V D+NDN P F++ Y
Sbjct: 120 SHHHFTVIASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSY 161
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D N I+Y I + R F I ++GIV LDR+
Sbjct: 902 KIHATDADIGINR-KIKYSFIDS--YRDHFKIAPDSGIVTLAKPLDRE------------ 946
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +Y +TV A D G P LS++ + + V+DINDN P F Y
Sbjct: 947 --------------VKAVYNLTVRATDQGKPSLSNSAFLVVNVQDINDNPPEFTSKHY 990
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
M++ A D D SNG I+Y + G+ F ID TG + TL LD+
Sbjct: 589 MKLTARDSDSGSNG-DIRYSLSTEVGDIVNIFDIDAYTGWITTLVPLDK----------- 636
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ VIA DNG P+ S T+ I ++D ND P F Y
Sbjct: 637 --------------EKREDYKFQVIATDNGQPKHSTRTTVIIRLKDYNDCPPTFKESHY 681
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D+D N + YRI + G+R +F I+++TG + LDR
Sbjct: 1110 LQIRANDMDSGENS-RVSYRIER--GDRMGQFDIEEDTGYISVAGTLDR----------- 1155
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G+P LS + I + D NDN P+F Y
Sbjct: 1156 --------------ESISSYVLEVQARDHGSPSLSTYVLVNIEISDANDNPPLFTSNNY 1200
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D+D P+N + R F++DK++G +KT LDR E + + ++
Sbjct: 797 LQIQANDIDEPANS---RLRFYLTGNGAEDFNLDKDSGQLKTARQLDR---ETQSKFHLV 850
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++IT+ D+NDN P F Y
Sbjct: 851 AHVQ----DRDHPGWEC------------------SSQIEITITDLNDNPPDFSMNPY 886
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2 [Acyrthosiphon pisum]
Length = 4147
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V AT +D N + I E KFSI+ ETG++ LD
Sbjct: 3314 RVLATSLDSGKNAEVVYS--IAGGNEHNKFSINSETGVISVFEMLDY------------- 3358
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER ++ +T+ A D G P LS+ + IT+ D NDN P+F ++ Y
Sbjct: 3359 ------------ERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAY 3403
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D NG I+Y ++K +F+ID TG + LDR
Sbjct: 3418 IKVSATDLDSELNG-KIRYALVKG-DHHQQFAIDSFTGNITVAKPLDR------------ 3463
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + + A D+G P+L +++ V D+NDN P+F + Y
Sbjct: 3464 -------------EQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNY 3508
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD DPP + + Y I+ G FSID E G ++T+ LD
Sbjct: 1085 VSATDADPPGDVSRVGYSIVDGDG-LGYFSIDSE-GNIRTMVVLDV-------------- 1128
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E + ++TV+A D+ T + + + V++INDN P+
Sbjct: 1129 -----------ETKSSYWLTVMAFDHATVPMHSRLEVYVEVKNINDNVPL 1167
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
K+SI K+ + +D E+E IY+ Q+LD E ++ + A D G
Sbjct: 2396 KYSIKKDEENSTDYFHID----EKEGSIYLK-----QSLDH---ETRPFHHVVLEATDTG 2443
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ITV D+NDN P F++ Y
Sbjct: 2444 LPPLSTTTHLWITVLDVNDNAPKFEQSSY 2472
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A+D D SNG +QY I++ R F + TG ++T LD E IT
Sbjct: 1852 MLIKASDADSGSNG-LLQYEIVEFLQSRM-FHVVSNTGAIRTTTLLDY-----ETSPNIT 1904
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
RV+ +D+ +P R ++ V I++ D+ND P+F +Y
Sbjct: 1905 --FRVRVIDQGNPRRTSDVLAKVF----------------ISILDVNDCPPVFTSYEY 1944
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
D P N IQ A + + TG ++L+A+ + ITT R L
Sbjct: 1180 DAPPNTPIIQLEAEDADMSDTRITYKITTGNPQSLFAISANTG------LITTTGR--KL 1231
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR+ E E + +TVI D+G P LS ++ I VED+NDN P
Sbjct: 1232 DRE-TESEHILEVTVI--DDGVPVLSSTTSVVIAVEDVNDNAP 1271
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++HATD D G + + F I ++GIV LDR+ E T
Sbjct: 3209 IKMHATDADI---GLNRKLKFSLQDSADNHFIISSDSGIVTLAKKLDRETCE-------T 3258
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I V+A+D+ G+P LS + + V D+NDN P+F + Y
Sbjct: 3259 YNISVKAIDQ------------------GSPPLSSLTQLHVIVLDVNDNPPIFVQRTY 3298
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 38 GIVKTLYALDRDDPE---REKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQL 93
GI+++L +D DP+ R KE + + + L+ D E + Y +++ A D+GTP+
Sbjct: 300 GIIRSLEIVD-GDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGYNLSLRAVDSGTPER 358
Query: 94 SDACTMKITVEDINDNEPMFDRVQY 118
++ I + D+NDN P+F+R Y
Sbjct: 359 DTYRSIHIELADVNDNAPVFERELY 383
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG I Y I A + F ID TG++KT + LD + RE ++I
Sbjct: 505 VKISARDKDSGENG-YISYSI--ANLKPVPFDIDHFTGLIKTTHLLDFETMRREYVLHI- 560
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+A D P R + + I ++D+NDN P F+++
Sbjct: 561 -----RASDWGYPYRRQT-----------------EMKLVIKLKDVNDNRPQFEKI 594
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
3 [Acyrthosiphon pisum]
Length = 4140
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V AT +D N + I E KFSI+ ETG++ LD
Sbjct: 3307 RVLATSLDSGKNAEVVYS--IAGGNEHNKFSINSETGVISVFEMLDY------------- 3351
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER ++ +T+ A D G P LS+ + IT+ D NDN P+F ++ Y
Sbjct: 3352 ------------ERVRDYLLTIQATDLGEPPLSNQAMVNITILDANDNAPIFGQLAY 3396
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D NG I+Y ++K +F+ID TG + LDR
Sbjct: 3411 IKVSATDLDSELNG-KIRYALVKG-DHHQQFAIDSFTGNITVAKPLDR------------ 3456
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + + A D+G P+L +++ V D+NDN P+F + Y
Sbjct: 3457 -------------EQVSTYNLQIRATDSGVPELMSFALVQVQVNDVNDNPPLFSQHNY 3501
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD DPP + + Y I+ G FSID E G ++T+ LD
Sbjct: 1085 VSATDADPPGDVSRVGYSIVDGDG-LGYFSIDSE-GNIRTMVVLDV-------------- 1128
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E + ++TV+A D+ T + + + V++INDN P+
Sbjct: 1129 -----------ETKSSYWLTVMAFDHATVPMHSRLEVYVEVKNINDNVPL 1167
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
K+SI K+ + +D E+E IY+ Q+LD E ++ + A D G
Sbjct: 2389 KYSIKKDEENSTDYFHID----EKEGSIYLK-----QSLDH---ETRPFHHVVLEATDTG 2436
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + ITV D+NDN P F++ Y
Sbjct: 2437 LPPLSTTTHLWITVLDVNDNAPKFEQSSY 2465
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A+D D SNG +QY I++ R F + TG ++T LD E IT
Sbjct: 1852 MLIKASDADSGSNG-LLQYEIVEFLQSRM-FHVVSNTGAIRTTTLLDY-----ETSPNIT 1904
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
RV+ +D+ +P R ++ V I++ D+ND P+F +Y
Sbjct: 1905 --FRVRVIDQGNPRRTSDVLAKVF----------------ISILDVNDCPPVFTSYEY 1944
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
D P N IQ A + + TG ++L+A+ + ITT R L
Sbjct: 1180 DAPPNTPIIQLEAEDADMSDTRITYKITTGNPQSLFAISANTG------LITTTGR--KL 1231
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR+ E E + +TVI D+G P LS ++ I VED+NDN P
Sbjct: 1232 DRE-TESEHILEVTVI--DDGVPVLSSTTSVVIAVEDVNDNAP 1271
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++HATD D G + + F I ++GIV LDR+ E T
Sbjct: 3202 IKMHATDADI---GLNRKLKFSLQDSADNHFIISSDSGIVTLAKKLDRETCE-------T 3251
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I V+A+D+ G+P LS + + V D+NDN P+F + Y
Sbjct: 3252 YNISVKAIDQ------------------GSPPLSSLTQLHVIVLDVNDNPPIFVQRTY 3291
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 38 GIVKTLYALDRDDPE---REKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQL 93
GI+++L +D DP+ R KE + + + L+ D E + Y +++ A D+GTP+
Sbjct: 300 GIIRSLEIVD-GDPDGHFRIKETGHSGEYNIVVLNMLDRETAPKGYNLSLRAVDSGTPER 358
Query: 94 SDACTMKITVEDINDNEPMFDRVQY 118
++ I + D+NDN P+F+R Y
Sbjct: 359 DTYRSIHIELADVNDNAPVFERELY 383
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG I Y I A + F ID TG++KT + LD + RE ++I
Sbjct: 505 VKISARDKDSGENG-YISYSI--ANLKPVPFDIDHFTGLIKTTHLLDFETMRREYVLHI- 560
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+A D P R + + I ++D+NDN P F+++
Sbjct: 561 -----RASDWGYPYRRQT-----------------EMKLVIKLKDVNDNRPQFEKI 594
>gi|47227866|emb|CAG09029.1| unnamed protein product [Tetraodon nigroviridis]
Length = 421
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D NG I Y + + G +K FSID TGI I
Sbjct: 336 LQVTARDKDHGPNG-DITYSLFQDQGAHSKWFSIDSVTGI-------------------I 375
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
TTD ++ D E+ ITV+A D G P +S + I ++DINDNEP
Sbjct: 376 TTDSQL------DYEKNPNPSITVVATDGGKPPMSSTALVNIVLQDINDNEP 421
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ +++ A D G+P+ +D ++ ITV+DINDN P+F++ +Y
Sbjct: 58 DREKRSTYTLSLEAFDGGSPKRTDVMSLDITVQDINDNAPVFNQSRY 104
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVI 84
GE A ++ E G K +AL D IY+ R+ LDR+ E++ Y + V+
Sbjct: 240 GEYANVNVSLEGGDGK--FALTTKD----NIIYLICVDRI--LDRE----ERDTYELRVM 287
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A D+GTP L + I V D+NDN P+FD+ Y
Sbjct: 288 ATDSGTPPLRAESSFIIQVTDVNDNPPLFDQPVY 321
>gi|410931117|ref|XP_003978942.1| PREDICTED: protocadherin Fat 2-like, partial [Takifugu rubripes]
Length = 1091
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D P N ++Y I+ +FSI +G + ALDR
Sbjct: 69 LKVTATDQDGPVNS-LLRYSIVSG-DPLQQFSIHPRSGEISVATALDR------------ 114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LS A + ITV D+NDN P+F +V +
Sbjct: 115 -------------EEVPHYSLTVQAADEGAPPLSSAVLITITVADVNDNPPIFSQVNH 159
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER + Y++V G LSD T+ + V D+NDN P+F+ Y
Sbjct: 9 DFERSRAYYLSVEGS-RGRQSLSDITTVIVNVTDVNDNPPVFEEGGY 54
>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
Length = 4589
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + LD
Sbjct: 3256 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVSEVLDY------------ 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E K Y+ V A+D GTP LS T+ +T+ D+NDN P F +
Sbjct: 3302 -------------ELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQ 3343
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D DP +G IQY I G +FSID E+G++ LDR
Sbjct: 1063 LQVTARDEDPGRDG-EIQYSIRDGSG-LGRFSIDDESGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETTSSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG I + I+ G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSQPNG-QIHFSIVS--GDRDNEFTVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANY 3451
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV +TD D +N + Y+I++ F ID +G++ T LD
Sbjct: 2307 LQVVSTDADSENNK-MVHYQIVQDTYNSTDYFHIDSTSGLILTARMLDH----------- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V + D+G P LS + I + DINDN P+F+++ Y
Sbjct: 2355 --------------ESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIY 2399
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESMAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A DVD +NG + E+ FSID TG + TL LD
Sbjct: 2835 QVRAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +V+A D G LS + + V DINDN P+F Y
Sbjct: 2884 --------------ETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVFAHEVY 2929
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ + ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----QTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSY 836
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID +V T ER
Sbjct: 2516 IHVRATDGDPGTYG-QVSYAIINDFA-KDRFLIDGNGQVVTT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRENP-LEGDISIFLRALDGG--GRTSFCTVRVIVVDENDNAPQFLTVEY 2605
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID +GIV I Q LDR E++ I+V A D
Sbjct: 3178 FSIDSWSGIV----------------------ILEQPLDR---EQQPSYNISVQATDQSP 3212
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS + ITV DINDN P+F+R Y
Sbjct: 3213 GQSLSSLAIVTITVLDINDNPPVFERRDY 3241
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGI+ LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTRQFAINSSTGIIYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A RD E ++++ V T+K+ ++D+ND P F Y
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPAFIPTSY 941
>gi|14039481|gb|AAK53238.1|AF326313_1 protocadherin-betaT [Mus musculus]
Length = 844
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR ER E IT+ A D GTP+L+ T+++ V DINDN P F + Y
Sbjct: 452 KALDR---ERRAEYNITITASDMGTPRLTTQHTIRVQVSDINDNAPAFTQTSY 501
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E E+ +T+ A D G+P S + I V DINDN P F + Y
Sbjct: 246 DHEEESELRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFY 292
>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
Length = 4557
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + LD
Sbjct: 3256 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVSEVLDY------------ 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E K Y+ V A+D GTP LS T+ +T+ D+NDN P F +
Sbjct: 3302 -------------ELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKFSQ 3343
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D DP +G IQY I G +FSID E+G++ LDR
Sbjct: 1063 LQVTARDEDPGRDG-EIQYSIRDGSG-LGRFSIDDESGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETTSSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG I + I+ G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSQPNG-QIHFSIVS--GDRDNEFTVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANY 3451
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV +TD D +N + Y+I++ F ID +G++ T LD
Sbjct: 2307 LQVVSTDADSENNK-MVHYQIVQDTYNSTDYFHIDSTSGLILTARMLDH----------- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V + D+G P LS + I + DINDN P+F+++ Y
Sbjct: 2355 --------------ESVQHCTLKVRSTDSGFPSLSSEVLVHIHISDINDNPPVFNQLIY 2399
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A DVD +NG + E+ FSID TG + TL LD
Sbjct: 2835 QVRAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +V+A D G LS + + V DINDN P+F Y
Sbjct: 2884 --------------ETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVFAHEVY 2929
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESMAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ + ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----QTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSY 836
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID +V T ER
Sbjct: 2516 IHVRATDGDPGTYG-QVSYAIINDFA-KDRFLIDGNGQVVTT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRENP-LEGDISIFLRALDGG--GRTSFCTVRVIVVDENDNAPQFLTVEY 2605
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID +GIV I Q LDR E++ I+V A D
Sbjct: 3178 FSIDSWSGIV----------------------ILEQPLDR---EQQPSYNISVQATDQSP 3212
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS + ITV DINDN P+F+R Y
Sbjct: 3213 GQSLSSLAIVTITVLDINDNPPVFERRDY 3241
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGI+ LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTRQFAINSSTGIIYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A RD E ++++ V T+K+ ++D+ND P F Y
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPAFIPTSY 941
>gi|195036462|ref|XP_001989689.1| GH18657 [Drosophila grimshawi]
gi|193893885|gb|EDV92751.1| GH18657 [Drosophila grimshawi]
Length = 848
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 1 MQVHATDVDPPSNG---GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+QV A D+D NG I Y I++ R FSID E+G V+ L+ D ++
Sbjct: 637 LQVEARDLD--LNGTENSQITYEIVEGL-YRMNFSIDPESGYVRPLHHFDYEE------- 686
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
D + + + + E +EI + + A D+G P LS + I V+D+NDN P+F +
Sbjct: 687 --LVDSHRRPVRQANAEM-REIDLLIRARDSGIPMLSTVVPVLIYVQDVNDNPPIFQKSF 743
Query: 118 Y 118
Y
Sbjct: 744 Y 744
>gi|351713328|gb|EHB16247.1| Protocadherin Fat 3 [Heterocephalus glaber]
Length = 3464
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + ALD
Sbjct: 2093 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVSEALDY------------ 2138
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E K Y+ V A+D GTP LS A T+ I + D+NDN P F +
Sbjct: 2139 -------------ELCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNPPKFSQ 2180
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV +TD+D N + Y+I++ F ID +G++ T LD
Sbjct: 1152 LQVVSTDIDS-GNNKMVHYQIVQDTYNSTDYFHIDSSSGLMLTARMLDH----------- 1199
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS + I + DINDN P+F+++ Y
Sbjct: 1200 --------------ELVQHCTLKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIY 1244
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 641 LVIRATDADSNQNA-LLMYQIVESMAKKF-FTVDSSTGAIRTIANLDH------------ 686
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 687 -------------ETIAHFHFHVQVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFSQAVF 733
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS T+ ITV DINDN P+F+R Y
Sbjct: 2028 QPLDR---EQQSSYNISVRASDQSPGQSLSSVATITITVLDINDNPPVFERRDY 2078
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 2242 DRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANY 2288
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV ATD+D +NG + E+ F+ID TG + TL LD
Sbjct: 1672 QVRATDLDWGANGQVTYSLHSDSHLEKVMEAFNIDSNTGWISTLKDLDH----------- 1720
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + +V+A D G LS + + V DINDN P+F Y
Sbjct: 1721 --------------ETDPAFSFSVVASDLGEAFSLSSMALVSVRVTDINDNAPVFAHEVY 1766
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 19/105 (18%)
Query: 29 AKFSIDKETG-IVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDP 73
A +D E G ++ + A+DRD + Y+ D I +A + D
Sbjct: 936 AAVQVDAEPGTLIYRVTAIDRDKGANGEVTYVLQDDYGHFKINPNSGNVILKEAFNSDLS 995
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E+ TV+A+D G P LS + + IT+ +N P+FD+ Y
Sbjct: 996 NIEYEV--TVVAKDGGKPSLSTSVELPITI--VNKAMPVFDKPFY 1036
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 1361 IHVRATDGDPGTYG-QISYAIINDFA-KDRFLIDSNGQVITT---------ER------- 1402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E ++ I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 1403 -------LDRENP-LEGDVSIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 1450
>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2555
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I++ G F+I+ +TG++ T + DR
Sbjct: 459 LRVQAHDADTGVNG-EVKYGIMQRDGASPGFTINPDTGVISTAVSFDR------------ 505
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E ++V A D L C + + + D NDN+P F+ +Y
Sbjct: 506 -------------EKQREYTLSVTATDQAQEPLIGICQITVLIADQNDNDPKFENSRY 550
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D +G I Y I+K G+ FSI+ TGI+ T DR+ +K Y+
Sbjct: 778 QVSATDLDSGLHG-MINYIILKDQSGDSQFFSINSYTGIIHTRATFDRE----QKGSYL- 831
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R + G P +D +++ V D+NDN P F + Y
Sbjct: 832 --IEVQSQDSSESARPGQ---------QGQPN-TDTAYVRVFVTDVNDNAPAFSQPVY 877
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
IT+ V R D ER +Y TV+A D GTP + +++I + ++ND P+F +
Sbjct: 274 ITSQGVVSPSQRLDYERPNHMYECTVVAVDKGTPPRTGTASIRIRMANVNDEAPVFSQTI 333
Query: 118 Y 118
Y
Sbjct: 334 Y 334
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D+D NG Y I +F +DK +G V +LDR
Sbjct: 1325 QVTAMDLDSGQNG-RFTYSIAPESDPFQQFLVDK-SGWVVVADSLDR------------- 1369
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E+ + + ++A D G+P L+ + + +TV+D+NDN P F+
Sbjct: 1370 ------------EKVAQHRLMILATDMGSPALTGSAIVLVTVQDVNDNGPEFE 1410
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 33/124 (26%)
Query: 1 MQVHATDVDPPSNG--GTIQYRIIKAPGERAK---FSIDKETGIVKTLYALDRDDPEREK 55
M++ ATD+D P G + YRI++ FSI+ TG + T+
Sbjct: 1104 MEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINPTTGTIYTV------------ 1151
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+++LDR+ +R Y+ V+ A D G LS T I + D+ND+ P+F
Sbjct: 1152 ---------LRSLDREVVDR----YLVVVEARDGGG--LSGTGTATIVISDVNDHPPVFT 1196
Query: 115 RVQY 118
+ Y
Sbjct: 1197 QRVY 1200
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 32/112 (28%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HA D D SNGG R++ + F++ TD
Sbjct: 1436 LHAIDRDTSSNGGPFSIRLLMLTSDVTNFNL---------------------------TD 1468
Query: 63 IR-----VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+R + AL D E++K+ + ++ D+G+P +S T+ + + D ND+
Sbjct: 1469 MRNGSAMITALRSFDREQQKQYLLPILMIDSGSPPMSSTSTLTVIIGDKNDH 1520
>gi|348514383|ref|XP_003444720.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 1598
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER ITV D G P LS + T+ + + D+NDNEP+F+R Y
Sbjct: 406 DRERASNYNITVTCSDEGVPSLSSSVTLTLQISDVNDNEPVFERSSY 452
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E I V D G P LS + T+ + + D+NDN P+F+R Y
Sbjct: 1394 DRERTSEYNIIVTCSDEGVPSLSSSVTLTLQISDVNDNAPVFERSSY 1440
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+E+ I + + A D G PQ+S + ITV D NDN P+F + Y
Sbjct: 1184 DREKEESISLVLTAFDGGDPQMSGTIRIFITVLDANDNAPVFTQSTY 1230
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + + + A D G PQLS ++I+V D NDN P+F + Y
Sbjct: 196 DREAQQHLSLILTAVDGGEPQLSGTVRIEISVLDANDNAPVFTQEVY 242
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 74 EREKEIYITVI--AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+REK+ Y++++ A D G PQ+S + +TV D NDN P F + Y
Sbjct: 696 DREKKDYLSLLLTAMDGGEPQMSGTMQIFVTVLDANDNAPTFAKPLY 742
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 29/114 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A+D D SNG I+Y I + + A F I +E+G +K + +D
Sbjct: 1246 SVSASDADHGSNG-RIKYSITNSLDQAHALFQIHEESGEIKLIGNIDY------------ 1292
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + +I + A D+G L+D+C + + V DINDN+P +
Sbjct: 1293 -------------ENARNYHINIRASDDG--GLTDSCKVVVEVVDINDNKPTIN 1331
>gi|256078635|ref|XP_002575600.1| cadherin [Schistosoma mansoni]
gi|360045167|emb|CCD82715.1| putative cadherin [Schistosoma mansoni]
Length = 1203
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD+D N I Y ++ P + A F ID TG + T+ +LD
Sbjct: 537 IHATDLDVGVNA-LITYSLVN-PYDTAFFRIDPITGKLWTIQSLD--------------- 579
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E ++ VIA D+G+P LS + + ITVED NDN P F Y
Sbjct: 580 ----------CENRSEYHLVVIARDSGSPVPLSSSANIVITVEDTNDNVPEFLNTHY 626
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 70 RDDPEREKEIYITVIAE---DNGTPQLSDACTMKITVEDINDNEPMFDR 115
R P+RE++ + TV E D G LS ++ IT+ DIN+++P+F +
Sbjct: 467 RKIPDREEKHFYTVTVECIDDEGQYALSRNASLHITITDINEHKPIFTK 515
>gi|402870674|ref|XP_003899331.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Papio anubis]
Length = 2924
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD
Sbjct: 1815 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKGILDY------------ 1860
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A D G P+LS+ +K+ V DINDN P F
Sbjct: 1861 -------------EHTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF 1900
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G + Y I+ E F +D+ +G++ T LD
Sbjct: 1191 VHHIIAHDPDEGRNGKVTYSILSG-NENMAFMLDESSGLLTTTCPLDY------------ 1237
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + V+A D+GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1238 -------------EMKTQHILIVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLY 1282
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2171 VLLHSLDRETSANHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2223
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 48/118 (40%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N +Q+ I+ PG + F I+ +TG V T LDR
Sbjct: 1298 RVEALDRDSGVNS-KLQFEIM--PGASFELFEINSDTGEVVTTTMLDR------------ 1342
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V+ D G P LS T+ TVED ND+ P F Y
Sbjct: 1343 -------------EIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSY 1387
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I ALDR E +TV+ D G+P + + ++V DINDN P F
Sbjct: 800 INWVALDR---EHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 847
>gi|395546164|ref|XP_003774961.1| PREDICTED: protocadherin-11 X-linked-like [Sarcophilus harrisii]
Length = 1268
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D NG I Y + P + FS+D TGI+ + LDR
Sbjct: 487 KLSATDKDSGKNG-EITYLLAGEPP--SAFSLDNRTGILTAVEQLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + TV A DNG P L T+ +TV D NDN P F +Y
Sbjct: 531 ------------EMKDKYTFTVTARDNGVPHLQSNATVTVTVLDQNDNSPTFTHSEY 575
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 25/101 (24%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDP 73
G QY +IK+ + ++ LD + PE EK + I + LDR+
Sbjct: 172 GIQQYHLIKS----------------QNVFGLDVIETPEGEKWPQL---IVQKMLDRE-- 210
Query: 74 EREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
EK++Y+ + ED G+P S ++++V D+NDN P+F
Sbjct: 211 --EKDMYVMKLKVEDGGSPPRSSTAILQVSVIDMNDNRPIF 249
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T+QY I + G+R++F I+ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDMGPNG-TVQYSI--SAGDRSRFQINAKSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + +TV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D S+ GT+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 607 ATDGDL-SDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDRE----EQAFYC----- 656
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 657 ----------------LLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 694
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN 3612
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q A D D NG + Y + + P + F+I+++ G + L ALD + EI
Sbjct: 914 QAKAMDPDEGVNG-RVLYSLKQNP--KNLFAINEQNGNISLLGALDVHAGSYQLEI---- 966
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + I V D+NDN P+FD++ Y
Sbjct: 967 ----------------------LASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISY 1001
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVSATDSDEGTNG-QVRYGIVGG-NTHQEFRIDSVTGAITVAKTLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+ +D CT+ IT+ D+ND P+F+ Y
Sbjct: 2220 -------------ETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPY 2264
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D+D SNG I Y I+K ER +F+ID+ +G V + LD
Sbjct: 1230 LRVSASDMDEGSNG-LIHYSILKGNEER-QFAIDRFSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPK 1317
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVY 2159
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2690 LTVSATDKDSGPNG-QLDYEIVNGNKENS-FTINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I + D NDN P F ++
Sbjct: 2736 -------------EKMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQI 2778
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Q+LDR E + V A D G+P L+ T+ + V+DINDN P F
Sbjct: 2319 IQSLDR---EARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTF 2364
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P+ E DR+ R + + TVIA D
Sbjct: 1124 AVDKDFGPNGEVRYAFEVTQPDFELHAVTGEITNTHKFDRESLMRRRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTSGLDR-------------- 3472
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 3473 -----------ESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 3512
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPV 352
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQERYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|344281957|ref|XP_003412742.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Loxodonta
africana]
Length = 1025
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|301608223|ref|XP_002933690.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
tropicalis]
Length = 830
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 34/45 (75%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D E E IT+ AED G+PQL+++ T+++T+ D+NDN P+FD++
Sbjct: 415 DRELTPEYNITIKAEDKGSPQLTNSKTIRLTLTDVNDNAPVFDKM 459
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +E YI V+A+D+G+P S T+KI + D NDN P
Sbjct: 525 DYEKLREFYIQVMAKDSGSPSRSANATVKICITDQNDNAP 564
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++ + + A D GTP + +KI + D+NDN P+F++ Y
Sbjct: 205 DREKKNSSVLILSAFDGGTPSKTGTSLIKIAITDVNDNHPLFNKDMY 251
>gi|327269193|ref|XP_003219379.1| PREDICTED: protocadherin Fat 3-like [Anolis carolinensis]
Length = 4553
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A D+D P NG I + II G+R +FSID G++K LDR
Sbjct: 3361 AEDLDSPPNG-QIHFSIIN--GDRNNEFSIDPSLGLIKVKKRLDR--------------- 3402
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P LS + T+ + + D+NDN P+F Y
Sbjct: 3403 ----------ERISGYSLVIQARDSGIPSLSASVTVNVDISDVNDNSPVFTPANY 3447
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ TG IY+
Sbjct: 3252 LSVFATSKDIGTNA-EITY-LIRSGNEKGKFRINSRTG-----------------SIYV- 3291
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E K+ ++ + A+D G+P LS T+ I V D+NDN P F + Y
Sbjct: 3292 -------IEHLDYETCKDFFLIIEAKDGGSPALSAVTTVNINVTDVNDNAPRFSQEVY 3342
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 28/121 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D +NG + + +R F+ID +G + TL LD
Sbjct: 2830 VQVKATDADWGANGQVTYSLLAEVEADRITEVFTIDSNSGWISTLKDLDH---------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQ 117
ER TV++ D G T LS + +TV DINDN P+F+
Sbjct: 2880 ---------------ERNPTFSFTVVSSDLGETLSLSSTTLISVTVTDINDNAPVFEHDM 2924
Query: 118 Y 118
Y
Sbjct: 2925 Y 2925
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +N IQY+I++ F ID +G++ T LD
Sbjct: 2303 LQVIATDADSENNK-IIQYQIVQDTFNSTDYFHIDGSSGLILTARLLDH----------- 2350
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A DNG P LS + I V D+NDN P+F+++ Y
Sbjct: 2351 --------------ELMQQCILKVRATDNGFPPLSSEVLVSIFVTDMNDNPPIFNQLIY 2395
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 31/114 (27%)
Query: 1 MQVHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D NG G IQY + G +F+ID+ETG++ T LDR
Sbjct: 1059 LQVTARDDD---NGRDGEIQYSVRDGSG-LGRFNIDEETGVIYTADILDR---------- 1104
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E + ++TV A D G L + I VED+NDN P+
Sbjct: 1105 ---------------ETTQSYWLTVYATDRGVVPLFTTIEVYIEVEDVNDNAPL 1143
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A DVD NG + Y I + F+++ ETG++K L LDR+ + E+Y+
Sbjct: 742 FRIKAYDVDSGFNGKVL-YTISDGNVDSC-FNLEMETGLLKVLLPLDRE----KTELYL- 794
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D GTPQ + + ITVED NDN P F + Y
Sbjct: 795 --------------------LNITIYDLGTPQKATWRLLTITVEDANDNRPEFLQESY 832
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FS+DK +GI+ + LDR E + +T+ A D G
Sbjct: 3174 FSVDKSSGIIILEHPLDR-------------------------ELQPSYNVTIKASDQGI 3208
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS T+ ITV DINDN P+F+R Y
Sbjct: 3209 VQTLSSFATVTITVLDINDNPPVFERRDY 3237
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N + Y+I+++ +R F++D TG ++T+ LD
Sbjct: 1792 LVIRAIDADSNQNA-LLVYQIVESTAKR-YFTVDSNTGAIRTIADLDH------------ 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++T++ D+NDN P+F + +
Sbjct: 1838 -------------ETIAHFHFHVHVRDSGNPQLTAENPVEVTIDVTDVNDNPPVFSQAMF 1884
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D SNG I+Y + + KF +D E+G +KTL LDR+ + +Y
Sbjct: 3045 LQMGAKDADIGSNG-EIRYSLYGSGNN--KFYLDPESGELKTLAPLDRE----KIPVY-- 3095
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +A D + EI++ + ED+NDN PMF Y
Sbjct: 3096 -NLIARATDGGGRFCQSEIHLIL--------------------EDVNDNPPMFSSDHY 3132
>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
Length = 4959
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ TG + L LDR
Sbjct: 2184 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASTGAIALLKQLDR----------- 2229
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +T++A D G+P L+ +++ V+DINDN P+F+ Y
Sbjct: 2230 --------------ETQSEYILTLVAMDTGSPPLTGTGIVRVEVQDINDNGPVFELQSY 2274
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D P NGG Y+++ A ++ S+DK +G+VK+ + DR+ IT
Sbjct: 3451 MTLSATDPDLPRNGGPFTYQLV-AGKHKSWLSVDKISGLVKSTGSFDRE---------IT 3500
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
P E I + ED+G P+ T+ ITV D NDN
Sbjct: 3501 ------------PTLEAVIEV----EDSGKPRQRAQHTLIITVLDQNDN 3533
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 31/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q ATD D N +++ ++ GE A+F ID +TG++ T LDR+ E +Y
Sbjct: 2289 LQPTATDKDAGLNA-KLRFNLL---GEHMARFHIDTDTGVITTATVLDRE----ETAVY- 2339
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T++A+D+ T + + + ITV D+NDNEP F+ Y
Sbjct: 2340 --------------------HLTLMAQDSSITEPRASSVNLTITVGDVNDNEPKFESGSY 2379
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID G ++TL DR+ +E + + + + DNG+
Sbjct: 972 FMIDTRNGFIRTLRPFDREALVKENR----NTESSEEERSASRGIGNFLMLEAMVTDNGS 1027
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P+L D +K+ V D+NDN P F R Y
Sbjct: 1028 PRLHDKVKVKVIVTDVNDNAPEFLRAPY 1055
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+D+G P LS T+ V D+NDN P+FD + Y
Sbjct: 1757 RLDYEEVQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSY 1805
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ 92
D++ GI + Y L + ++ + +T + +Q R +P +++ ++A D GTP
Sbjct: 744 DRDAGINSRVSYNLTHNPDQQFRIGPVTGVLYLQRPVRAEPG--STLHVELMATDAGTPP 801
Query: 93 LSDACTMKITVEDINDNEPMFDRVQY 118
LS+ ++ + + D+ND+ P+FD Y
Sbjct: 802 LSNRLSLLVHIADVNDHTPVFDHTSY 827
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2076 LQVSATDVDEGANG-RIRYSIMTG-DQNQDFSISEDTGVVRVAKNLNY------------ 2121
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ER +TV AED SD + I + DINDN P F
Sbjct: 2122 -------------ERNARYTLTVRAEDCAVENSASDTAELIIGILDINDNRPTF 2162
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 8 VDPPSNG--GTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
D P +G G + Y I + E F I+ ETG++ TL +DR+ + T
Sbjct: 1285 ADDPDSGLNGKVSYAISRQEPELTGGRHFGINTETGVIHTLREIDRESID-------TFR 1337
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1338 LTVVATDRAQPSSR---------------QLSTEKLVTVIVEDINDNAPIF 1373
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + + T +P + T+ +
Sbjct: 195 ATDADTGENGVTDQYEIVNG-------NVDHKFRLATT------TNPSGD-----TSYLH 236
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 237 LETTGNLDRESRGSYQLNISARDGGSPPRLGFLQVNVTILDVNDNPPIFDHSDY 290
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + + FSID TG + + A+ + ++ Y+ +
Sbjct: 2812 QIIATDRDKLGPNSVISYSLQQP---SPMFSIDPATGEIFSKKAI-----QYKRSQYVRS 2863
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ AL T++A DNG P L C + I + D +N P F++ Y
Sbjct: 2864 PENMYAL-------------TILATDNGKPPLYSECLVNINIVDAKNNPPKFEQAAY 2907
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + I V D+ND+EP+F++ +Y
Sbjct: 462 VRVNGVLDREEIGKYN---LTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEY 515
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I E F +D+ TG + LD D
Sbjct: 3029 LTVGATDEDVGPNG-MLRY-AISGGNENRDFMVDERTGGILIRQQLDYD----------- 3075
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+F++ +Y
Sbjct: 3076 --------------LVQEYHLNITVQDLGFKPLSAVALLTIILTDVNDNPPLFNQSEY 3119
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 28/107 (26%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N Y II + F ID ++G ++T LDR+D
Sbjct: 3353 DVRPQNN--QFSYSIING-NLKQGFKIDVQSGEIRTAARLDREDIAHYS----------- 3398
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A D G P + + T++I ++D+NDN P+F
Sbjct: 3399 --------------LVIGAIDTGLPPQTGSATVRIDLDDVNDNGPVF 3431
>gi|380796719|gb|AFE70235.1| protocadherin-16 precursor, partial [Macaca mulatta]
Length = 1815
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 186 LTLRATDPDLGANG-----QVTYGGVSSGSFSLDPDTGVLTTLRALDR------------ 228
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 229 -------------EEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTF 268
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 121 VQPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 171
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 708 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 759
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 760 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 792
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 289 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 332
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 333 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 372
>gi|405959520|gb|EKC25549.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1475
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A D D + + Y I+ GE + F I+ TG L D P
Sbjct: 684 SVTADDKDTTGDNMKLSYSIVSGNGE-SFFQINPNTG------KLMVDSPP--------- 727
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E E+ + + A D GTPQ S+ C+++I ++DINDN+PMF
Sbjct: 728 ----------DYEVATEVLLVIRATDKGTPQQSEVCSVRIEIKDINDNQPMF 769
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 25/117 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N G F+I++ +G + T+ LDR
Sbjct: 996 KVEATDGDEGENSKLFYSIATLWTGGDGMFAINQSSGEIYTIKDLDR------------- 1042
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + + +D G+P S T+ ITVEDIND P+F++ Y
Sbjct: 1043 ------------EIESQYLLWIRVQDGGSPPFSTEITVNITVEDINDQTPVFEKQAY 1087
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 28/110 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A+D D NG ++ + F ID +G+V LDR+ ER + I
Sbjct: 790 QIFASDKDSALNGNN---KMSYSSDSNVPFEIDPSSGVVTVTNDLDRETTERYEMI---- 842
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
VIA D G QLS T+ + V D+NDN P
Sbjct: 843 ---------------------VIATDKGNLQLSGTLTVDVLVTDVNDNPP 871
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 28/132 (21%)
Query: 3 VHATDVD--PPSNGGT----------IQYRI----IKAPGERAKFSIDKETGIVKTLYAL 46
V TDV+ PPS GT + RI ++ P + F+ TG + + + L
Sbjct: 861 VLVTDVNDNPPSVIGTYDTTIPEDFAVGIRIFSIKVQDPDDNRNFNFSILTGNIDSSFTL 920
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D Y+ I LDR+ ER EI I V D G P S + T I ++D+
Sbjct: 921 DPTDG------YL---ILSSKLDRELVER-YEIVIQV--ADVGDPSFSTSVTTTINIDDV 968
Query: 107 NDNEPMFDRVQY 118
ND +P F Y
Sbjct: 969 NDVKPAFKSSSY 980
>gi|380020280|ref|XP_003694018.1| PREDICTED: LOW QUALITY PROTEIN: fat-like cadherin-related tumor
suppressor homolog [Apis florea]
Length = 4753
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID TG++ LD ER ++
Sbjct: 3329 YYSIVGGNEHKKFQIDARTGVIIIAEQLDF-------------------------ERARD 3363
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 3364 YFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSY 3403
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y I + G+R K FSID++TG + + LDR
Sbjct: 3418 IQVFANDLDSEENG-NVSYYIER--GDRQKQFSIDQKTGQIIIVAPLDR----------- 3463
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P LS + I V D NDN P+F Y
Sbjct: 3464 --------------EEIGNYVLEVHARDSGIPVLSSFVMVNIEVLDANDNPPLFSLSNY 3508
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 3105 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTIGQLDR---ETQAKYSLT 3158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I + D+NDN P F Y
Sbjct: 3159 AHVQ----DRDKPSWEC------------------SSQLEILISDLNDNAPKFTMQTY 3194
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
YA+ D +I + V L R D E + + TVIA D G P LS + +T
Sbjct: 2394 YAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVT 2453
Query: 103 VEDINDNEPMFDRVQY 118
V D+NDN P F++ Y
Sbjct: 2454 VIDMNDNPPKFEQPSY 2469
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 2897 LKIIAHDDDLGSNG-EVRYSFGSDIGELANVFTVDAYTGWISTLVQLDK----------- 2944
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 2945 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAF 2984
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D NG + + G+R + F ID +TG + + LDR
Sbjct: 810 VRIRARDKDLDYNGKLV---FCVSGGDRDSVFKIDPDTGDLNVIGYLDR----------- 855
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E ++ + D G PQ S + + IT+ D+NDN P FD+
Sbjct: 856 --------------ERESEYFLNISVYDLGKPQKSASRMLPITILDVNDNAPRFDK 897
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV LDR+ K +Y
Sbjct: 3210 KVHATDDDIGINR-KIRYEFIDSAD--GHFLIATDSGIVTLGKPLDRE----TKAMY--- 3259
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +QALD+ GTPQL ++ + V+DINDN P F
Sbjct: 3260 NVTIQALDQ------------------GTPQLMSMTSLIVNVQDINDNPPEF 3293
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ D++ + +++ +PE I TT + + + D E + E + V D+G P
Sbjct: 1240 AFDRDVSPQRFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVTVRDDGWP 1299
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
LS + I V DIND+ P F++ Y
Sbjct: 1300 SLSSTTRVVIAVADINDHGPEFEQKFY 1326
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 28/112 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D GG ++Y + A F +DK +G ++ +LD + E++++
Sbjct: 1027 ATDPDE-GGGGDVEYFLSDAMESEGYFKVDKVSGTIRITQSLDFE----ERQMHT----- 1076
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN--EPMFD 114
+T++A D G P LS + I V D+N+N P+FD
Sbjct: 1077 ----------------LTIVARDRGEPSLSSETMVIIDVVDVNENAHAPVFD 1112
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D DP I Y I G FSID E G +KT LD
Sbjct: 1133 VRAKDADPLGGDSRIGYTIRGGDG-IGIFSIDNE-GNIKTKAVLDV-------------- 1176
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ ++TV A+D+G LS + + + V D NDN P+
Sbjct: 1177 -----------ESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDKNDNTPL 1215
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ TD D N + + I E +F ++ ETG++ T LD EK+ + T
Sbjct: 439 IQLKVTDADEGRNA--LVFLEIVGGNEGGEFHVNAETGMLYTAVNLDA-----EKKAFYT 491
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ V A+D+ + GT + S A +KI V D NDN+P F++
Sbjct: 492 --LTVSAVDQGNA---------------GTRKQSSA-KVKINVVDTNDNDPTFEQ 528
>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
Length = 5086
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ TG + L LDR
Sbjct: 2313 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASTGAIALLKQLDR----------- 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +T++A D G+P L+ +++ V+DINDN P+F+ Y
Sbjct: 2359 --------------ETQSEYILTLVAMDTGSPPLTGTGIVRVEVQDINDNGPVFELQSY 2403
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D P NGG Y+++ A ++ S+DK +G+VK+ + DR+ IT
Sbjct: 3580 MTLSATDPDLPRNGGPFTYQLV-AGKHKSWLSVDKISGLVKSTGSFDRE---------IT 3629
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
P E I + ED+G P+ T+ ITV D NDN
Sbjct: 3630 ------------PTLEAVIEV----EDSGKPRQRAQHTLIITVLDQNDN 3662
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 31/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q ATD D N +++ ++ GE A+F ID +TG++ T LDR+ E +Y
Sbjct: 2418 LQPTATDKDAGLNA-KLRFNLL---GEHMARFHIDTDTGVITTATVLDRE----ETAVY- 2468
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T++A+D+ T + + + ITV D+NDNEP F+ Y
Sbjct: 2469 --------------------HLTLMAQDSSITEPRASSVNLTITVGDVNDNEPKFESGSY 2508
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 23/93 (24%)
Query: 44 YALDRDD------PERE---KEIYITTDIRVQALDRDD---------PEREKEIYITVIA 85
+ALDRD PE +EIY++ RV+ DRD E +++ ++A
Sbjct: 897 FALDRDAEPTIALPENAAVGQEIYLS---RVR--DRDAGINSRRPVRAEPGSTLHVELMA 951
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D GTP LS+ ++ + + D+ND+ P+FD Y
Sbjct: 952 TDAGTPPLSNRLSLLVHIADVNDHTPVFDHTSY 984
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID G ++TL DR+ +E + + + + DNG+
Sbjct: 1129 FMIDTRNGFIRTLRPFDREALVKENR----NTESSEEERSASRGIGNFLMLEAMVTDNGS 1184
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P+L D +K+ V D+NDN P F R Y
Sbjct: 1185 PRLHDKVKVKVIVTDVNDNAPEFLRAPY 1212
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+D+G P LS T+ V D+NDN P+FD + Y
Sbjct: 1886 RLDYEEVQHYILIVQAQDSGQPSLSTTITVYCNVLDLNDNAPLFDPMSY 1934
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2205 LQVSATDVDEGANG-RIRYSIMTG-DQNQDFSISEDTGVVRVAKNLNY------------ 2250
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ER +TV AED SD + I + DINDN P F
Sbjct: 2251 -------------ERNARYTLTVRAEDCAVENSASDTAELIIGILDINDNRPTF 2291
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 8 VDPPSNG--GTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
D P +G G + Y I + E F I+ ETG++ TL +DR+ + T
Sbjct: 1414 ADDPDSGLNGKVSYAISRQEPELTGGRHFGINTETGVIHTLREIDRESID-------TFR 1466
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1467 LTVVATDRAQPSSR---------------QLSTEKLVTVIVEDINDNAPIF 1502
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + I V D+ND+EP+F++ +Y
Sbjct: 390 VRVNGVLDREEIGKYN---LTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEY 443
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + + FSID TG + + A+ + ++ Y+ +
Sbjct: 2941 QIIATDRDKLGPNSVISYSLQQP---SPMFSIDPATGEIFSKKAI-----QYKRSQYVRS 2992
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ AL T++A DNG P L C + I + D +N P F++ Y
Sbjct: 2993 PENMYAL-------------TILATDNGKPPLYSECLVNINIVDAKNNPPKFEQAAY 3036
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I E F +D+ TG + LD D
Sbjct: 3158 LTVGATDEDVGPNG-MLRY-AISGGNENRDFMVDERTGGILIRQQLDYD----------- 3204
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+F++ +Y
Sbjct: 3205 --------------LVQEYHLNITVQDLGFQPLSAVALLTIILTDVNDNPPLFNQSEY 3248
>gi|328790298|ref|XP_394631.4| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Apis
mellifera]
Length = 3599
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID TG++ LD ER ++
Sbjct: 2175 YYSIVGGNEHKKFQIDARTGVIIIAEQLDF-------------------------ERARD 2209
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 2210 YFLTIQAVDGGIPPLSNHATVNITVIDSNDNAPIFSEVSY 2249
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D+D NG + Y I + G+R K FSID++TG + LDR
Sbjct: 2264 IQVFANDLDSEENG-NVSYYIER--GDRQKQFSIDQKTGQIIVAAPLDR----------- 2309
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P LS + I V D NDN P+F Y
Sbjct: 2310 --------------EEIGNYVLEVHARDSGIPVLSSFVMVNIEVLDANDNSPLFSLSNY 2354
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 1951 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTIGQLDR---ETQAKYSLT 2004
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I + D+NDN P F Y
Sbjct: 2005 AHVQ----DRDKPSWEC------------------SSQLEILISDLNDNAPKFTMQTY 2040
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
YA+ D +I + V L R D E + + TVIA D G P LS + +T
Sbjct: 1240 YAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVT 1299
Query: 103 VEDINDNEPMFDRVQY 118
V D+NDN P F++ Y
Sbjct: 1300 VIDMNDNPPKFEQPSY 1315
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 1743 LKIIAHDDDLGSNG-EVRYSFGSDIGELANVFTVDAYTGWISTLVQLDK----------- 1790
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 1791 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAF 1830
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV LDR+ K +Y
Sbjct: 2056 KVHATDDDIGINR-KIRYEFIDS--ADGHFLIATDSGIVTLGKPLDRE----TKAMY--- 2105
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +QALD+ GTPQL ++ + V+DINDN P F
Sbjct: 2106 NVTIQALDQ------------------GTPQLMSMTSLIVNVQDINDNPPEF 2139
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ D++ + +++ +PE I TT + + + D E + E + V+ D+G P
Sbjct: 86 AFDRDVSPQRFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVMVRDDGWP 145
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
LS + I V DIND+ P F++ Y
Sbjct: 146 SLSSTTRVVIAVADINDHGPEFEQKFY 172
>gi|194748040|ref|XP_001956457.1| GF24582 [Drosophila ananassae]
gi|190623739|gb|EDV39263.1| GF24582 [Drosophila ananassae]
Length = 1581
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 1 MQVHATD--VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+++HA D +DP TI Y I+ F ID +TG+++T ER+
Sbjct: 352 IKLHAVDPDIDPTQ---TISYNIVSG-NLVGYFEIDSKTGVIRT--------TERK---- 395
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + E + V DNG+P LS + +TV DINDN P FD Y
Sbjct: 396 ---------LDR---ENQAEHILEVAISDNGSPMLSSTSRIVVTVLDINDNSPEFDLRVY 443
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D N + Y + E F+++ G ++ LDR
Sbjct: 38 IHATDADSGINA-QVTYSL---SVECNDFTVNATNGCIRLNKPLDR-------------- 79
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + + A+D G P LS + + V+D+NDN P+F +Y
Sbjct: 80 -----------EKQDKYDLHITAKDGGNPALSSEALVYVLVDDVNDNAPVFGVQEY 124
>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
griseus]
Length = 3070
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D TG++ TL ALDR
Sbjct: 1441 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNTGVLTTLRALDR------------ 1483
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L +++TVED ND+ P F
Sbjct: 1484 -------------EEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHTPTF 1523
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T LD
Sbjct: 489 VRVTAQDPDQGTNG-QVTYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 534
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 535 --------------ELEPQPQLIVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 579
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL +LDR
Sbjct: 1122 RVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQSLDR------------- 1167
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + V +D+G+P S T+ I V D+NDN P F
Sbjct: 1168 ------------EHQSSFQLLVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTF 1207
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 1963 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2014
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2015 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2047
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F + Y
Sbjct: 2333 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASY 2379
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 426 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 473
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V DIND P F +Y
Sbjct: 1376 VRPLDR---EQRAEHVLTVVALDHGSPPRSSTQLLTVSVVDINDEAPAFPHQEY 1426
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D NG +QYRI+ A F++D +G T+ LDR
Sbjct: 1544 LRASDPDKGLNG-QLQYRILDGDPSGA-FTLDLTSGEFGTMRPLDR-------------- 1587
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1588 -----------EVEPAFKLQIEARDGGQPALSATLLVTVTVLDANDHAPAF 1627
>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
Length = 3015
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D TG++ TL ALDR
Sbjct: 1386 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNTGVLTTLRALDR------------ 1428
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G+P L +++TVED ND+ P F
Sbjct: 1429 -------------EEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHTPTF 1468
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T LD
Sbjct: 489 VRVTAQDPDQGTNG-QVTYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 534
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 535 --------------ELEPQPQLIVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 579
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL +LDR
Sbjct: 1122 RVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQSLDR------------- 1167
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + V +D+G+P S T+ I V D+NDN P F
Sbjct: 1168 ------------EHQSSFQLLVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTF 1207
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 27/140 (19%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETG---------------IVKTLYALD 47
+ A D D NG TI Y + PG FS+ TG V TL A D
Sbjct: 1235 LQAKDPDEGENG-TILY-TLTGPGSEL-FSLHPHTGELHTAASLIRAERPHYVLTLSAHD 1291
Query: 48 RDDPEREKEIYITTDIRVQALDRD---------DPEREKEIYITVIAEDNGTPQLSDACT 98
+ P R + + I + R D E+ E +TV+A D+G+P S
Sbjct: 1292 QGSPPRSASLQLLVQILLIQFSRSGALSVVRPLDREQRAEHVLTVVALDHGSPPRSSTQL 1351
Query: 99 MKITVEDINDNEPMFDRVQY 118
+ ++V DIND P F +Y
Sbjct: 1352 LTVSVVDINDEAPAFPHQEY 1371
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 1908 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 1959
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 1960 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 1992
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F + Y
Sbjct: 2278 DFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASY 2324
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 426 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 473
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D NG +QYRI+ A F++D +G T+ LDR
Sbjct: 1489 LRASDPDKGLNG-QLQYRILDGDPSGA-FTLDLTSGEFGTMRPLDR-------------- 1532
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1533 -----------EVEPAFKLQIEARDGGQPALSATLLVTVTVLDANDHAPAF 1572
>gi|432099154|gb|ELK28527.1| Protocadherin-15 [Myotis davidii]
Length = 1597
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 441 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTAHDGRPDGTSTATVNI 496
Query: 102 TVEDINDNEPMFD 114
V D+NDN+P+FD
Sbjct: 497 VVSDVNDNDPVFD 509
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+QV ATDVD G + YRI ++P + F++ TG + L +LD + P++E I
Sbjct: 630 LQVEATDVD---LGANVSYRI-RSPEVKHLFAMHPFTGELSLLRSLDYESFPDQEASI-- 683
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D IY T+ P ++ T+ + V+D+ND P+F + Y
Sbjct: 684 --TFLVEAFD---------IYGTM------PPGIA---TVTVIVKDMNDYPPVFSKRIY 722
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D SNG I Y I+ G++ F I+KETG++ P E + T
Sbjct: 320 IQLTAVDADEGSNG-EISYEILI--GDQGDFIINKETGLITIA-------PGVELIVGRT 369
Query: 61 TDIRVQALDRDDPEREKE----IYITVIAEDNGTP 91
+ VQA D P + +YI V+ +N +P
Sbjct: 370 YALTVQAADNAPPAERRHSICTVYIEVLPPNNQSP 404
>gi|380014510|ref|XP_003691272.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-like wing polarity
protein stan-like [Apis florea]
Length = 3167
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N + Y + G++A +F I+ +TG + T LDR
Sbjct: 826 VSATDSDVGKNA-QVTYSLDTDSGDQAASEFIINPQTGAITTTRPLDR------------ 872
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 873 -------------ELVPAYLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQY 917
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y + + G+ A F++D TGI++T LDR
Sbjct: 932 LRVSATDADTDLNG-RVRYGL-EDDGDGA-FAVDSTTGIIRTAKPLDR------------ 976
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + + +A D G+P LS + I +ED+ND+ P F+
Sbjct: 977 -------------ESVGKYVLKAVAMDRGSPSLSTVAPVTIKIEDVNDSPPXFE 1017
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
+++ A D D +N I+Y I A E +++ ETG + T LDR+ R +
Sbjct: 610 LRIQAYDADEGANA-QIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
TVIA D+G S + T+ +TV D+NDN+P FD
Sbjct: 669 -------------------------FTVIAADSGEISKSASATVILTVTDVNDNDPYFDP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID G V + LD
Sbjct: 506 RIRATDADS-GNNAAVRYAIIGGNTQNT-FSIDSMIGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRF 590
>gi|344281965|ref|XP_003412746.1| PREDICTED: protocadherin-11 X-linked-like isoform 5 [Loxodonta
africana]
Length = 1329
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|198421354|ref|XP_002120352.1| PREDICTED: similar to protocadherin [Ciona intestinalis]
Length = 1024
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITT---DIRVQALDRDDPEREKEIYITVIAED 87
++D++ G L Y L + + R + + T + ++ + + D E+++ +T+ A D
Sbjct: 174 AVDRDAGNNSILTYTLSQSNEFRLGQYFDETGSQHLHIEVVKQLDYEKKQLYRLTLTARD 233
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+G P L++ +++ V D+NDNEP+FDR +Y
Sbjct: 234 HGEPSLTNHVPLQVRVTDVNDNEPLFDRKEY 264
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 26/94 (27%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
I G FSID ++G + + ALDR+ + K
Sbjct: 546 IYSVSGGDGSFSIDPKSGNIMLVRALDREQVSKWK------------------------- 580
Query: 81 ITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMF 113
I V A D G P S + CT+ +TV+D+NDN P+F
Sbjct: 581 IFVTARDRGEPMTSSSHCTLIVTVDDVNDNAPVF 614
>gi|89994747|ref|NP_444375.2| protocadherin beta 20 precursor [Mus musculus]
gi|13876302|gb|AAK26071.1| protocadherin beta 20 [Mus musculus]
gi|21595186|gb|AAH31895.1| Protocadherin beta 20 [Mus musculus]
gi|26337851|dbj|BAC32611.1| unnamed protein product [Mus musculus]
gi|26454692|dbj|BAC32346.1| unnamed protein product [Mus musculus]
Length = 799
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR ER E IT+ A D GTP+L+ T+++ V DINDN P F + Y
Sbjct: 407 KALDR---ERRAEYNITITASDMGTPRLTTQHTIRVQVSDINDNAPAFTQTSY 456
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E E+ +T+ A D G+P S + I V DINDN P F + Y
Sbjct: 201 DHEEESELRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFY 247
>gi|410956868|ref|XP_003985058.1| PREDICTED: protocadherin-18 [Felis catus]
Length = 1107
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 421 DREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPHFQRSRY 467
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 196 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 248
>gi|344281963|ref|XP_003412745.1| PREDICTED: protocadherin-11 X-linked-like isoform 4 [Loxodonta
africana]
Length = 1327
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|344281961|ref|XP_003412744.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Loxodonta
africana]
Length = 1319
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|344281959|ref|XP_003412743.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Loxodonta
africana]
Length = 1337
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T+QY I + G+R++F I+ ++G++ T ALDR+ EK Y
Sbjct: 882 VSATDPDMGPNG-TVQYSI--SAGDRSRFQINAKSGVISTRMALDRE----EKTAY---- 930
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + +TV D DN P+F + Y
Sbjct: 931 -----------------QLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 969
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D S+ GT+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 778 ATDGDL-SDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDRE----EQAFYC----- 827
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 828 ----------------LLVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 865
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3701 MTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3747
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3748 -------------EQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN 3783
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G PQLS + + I V D+NDN P+FD++ Y
Sbjct: 1135 LEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISY 1172
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2345 IQVSATDSDEGTNG-QVRYGIVGG-NTHQEFRIDSVTGAITVAKTLDR------------ 2390
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+ +D CT+ IT+ D+ND P+F+ Y
Sbjct: 2391 -------------ETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPY 2435
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D+D SNG I Y I+K ER +F+ID+ +G V + LD
Sbjct: 1401 LRVSASDMDEGSNG-LIHYSILKGNEER-QFAIDRFSGQVTLIGKLDY------------ 1446
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1447 -------------EATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPK 1488
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2272 TIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFSQAVY 2330
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2861 LTVSATDKDSGPNG-QLDYEIVNGNKENS-FTINHATGEIRSIRPLDR------------ 2906
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I + D NDN P F ++
Sbjct: 2907 -------------EKMSHYELTVKSSDKGSPSQSTSVRVIINILDENDNAPRFSQI 2949
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Q+LDR E + V A D G+P L+ T+ + V+DINDN P F
Sbjct: 2490 IQSLDR---EARDNFVLVVTAADAGSPALTGTGTINVLVDDINDNVPTF 2535
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
YA + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1308 YAFEVTQPDFELHAVTGEITNTHKFDRESLMRRRGTAVFSFTVIATDQGLPQPLKDQATV 1367
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1368 HVYMKDINDNAPKF 1381
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3599 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTSGLDR-------------- 3643
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 3644 -----------ESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 3683
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 441 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 484
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 485 -------------EARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPV 523
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1230 DRELQERYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1276
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 380 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 426
>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3085
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N I Y+I F ID +G++ T LD +
Sbjct: 2353 LHVSATDKDSDKNN-VIHYQIFSDHNNTDYFHIDSSSGLILTARMLDHE----------- 2400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQ D VIA DNG P LS ++ + V DINDN P+F+++ Y
Sbjct: 2401 ---LVQKFD-----------FVVIATDNGFPPLSSEVSVTVMVSDINDNPPVFNQLLY 2444
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D G IQY I G +F+I++ETG++ T LDR
Sbjct: 1049 LQVAAQD-DDVGRDGEIQYSIRDGSG-LGRFAINEETGVIYTTDTLDR------------ 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPMFDRVQY 118
E + ++TV A D G PQ + + VED+NDN P+ Y
Sbjct: 1095 -------------ETKDSYWLTVYATDRGVVPQFATIAVF-VQVEDVNDNAPLTSEAMY 1139
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD DP G + Y + G R +FSID G + T LDR+DP +
Sbjct: 2561 VQVKATDSDP-GVFGRVTYSFVNDVG-RERFSIDA-NGQITTAEKLDREDPSNQY----- 2612
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++V A+D G +S A T+++++ D NDN P F +Y
Sbjct: 2613 ------------------VVVSVAAQDAGG-HVSYA-TVQVSLVDENDNAPHFWATEY 2650
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y ++ A A F I+ +G+V LDR E+
Sbjct: 837 IQVGATDRDAGPNG-EVAYSLLTAT---ANFGINSTSGVVYVAGQLDR-------ELVSV 885
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++V+A D+ + G+ + S T+K+ +ED+ND P+F
Sbjct: 886 FYLKVEARDK---------------AEQGSQRFS-VTTLKVVLEDVNDCPPVF 922
>gi|347543893|gb|AEP02519.1| PCDH15, partial [Myotis altarium]
Length = 1916
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 643 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTAHDGRPDGTSTATVNI 698
Query: 102 TVEDINDNEPMFD 114
V D+NDN+P+FD
Sbjct: 699 VVSDVNDNDPVFD 711
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+QV ATDVD G + YRI ++P + F++ TG + L +LD + P++E I
Sbjct: 832 LQVEATDVD---LGANVSYRI-RSPEVKHLFAMHPFTGELSLLRSLDYESFPDQEASI-- 885
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D IY T+ P ++ T+ + V+D+ND P+F + Y
Sbjct: 886 --TFLVEAFD---------IYGTM------PPGIA---TVTVIVKDMNDYPPVFSKRIY 924
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D SNG I Y I+ G++ F I+KETG++ P E + T
Sbjct: 522 IQLTAVDADEGSNG-EISYEILI--GDQGDFIINKETGLITIA-------PGVELIVGRT 571
Query: 61 TDIRVQALDRDDPEREKE----IYITVIAEDNGTP 91
+ VQA D P + +YI V+ +N +P
Sbjct: 572 YALTVQAADNAPPAERRHSICTVYIEVLPPNNQSP 606
>gi|47206153|emb|CAF95096.1| unnamed protein product [Tetraodon nigroviridis]
Length = 708
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I+ G + F ID + G + T + DR
Sbjct: 312 LRVQAQDADLGVNG-QVKYGIMHRDGVSSGFHIDPDAGYITTTVSFDR------------ 358
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ++V A D L C + + V D NDNEP F+ +Y
Sbjct: 359 -------------ERQREFTLSVTATDQADEPLIGICQITVLVADQNDNEPKFENSRY 403
>gi|348514466|ref|XP_003444761.1| PREDICTED: protocadherin-11 X-linked-like [Oreochromis niloticus]
Length = 1232
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D N I Y + +P F+ID+ +GI+ LDR
Sbjct: 486 IKISATDADSGHNAEII-YTL--SPDAPDGFNIDRRSGILSVGKRLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++ TVIA DNG+ L T+K+ V+D+NDN P F +Y
Sbjct: 531 -------------EKQERYSFTVIARDNGSTSLQSNVTVKLIVQDLNDNSPTFTHPEY 575
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R K ++ ++ D E +E I ++A D GTP L+ + + I ++D
Sbjct: 401 DHDVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPIF 466
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q LDR E++ + + ED G P S +++T+ D+NDN P+F
Sbjct: 205 QNLDR---EQKDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIF 249
>gi|344281967|ref|XP_003412747.1| PREDICTED: protocadherin-11 X-linked-like isoform 6 [Loxodonta
africana]
Length = 1300
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N + AP E F +D TGI+ + LDR
Sbjct: 487 KISATDADSGRNAEISYLLGVDAPSE---FDLDHRTGILTAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 ------------EKQEKYSFTVLAKDNGIPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETASHLDYESTREYAIKLLAADAGKPPLNQSSMLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G P+ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPRRSSTAILQVSVADTNDNHPVF 249
>gi|148678204|gb|EDL10151.1| mCG141284 [Mus musculus]
Length = 806
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR ER E IT+ A D GTP+L+ T+++ V DINDN P F + Y
Sbjct: 414 KALDR---ERRAEYNITITASDMGTPRLTTQHTIRVQVSDINDNAPAFTQTSY 463
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E E+ +T+ A D G+P S + I V DINDN P F + Y
Sbjct: 208 DHEEESELRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFY 254
>gi|194900814|ref|XP_001979950.1| GG16867 [Drosophila erecta]
gi|190651653|gb|EDV48908.1| GG16867 [Drosophila erecta]
Length = 1985
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD----------RD 49
+Q+ A D D + + Y I++ R+ F+ID ++G+++ +++ D R
Sbjct: 645 LQLEARDADLNGTENSQVTYEIVEGL-YRSNFTIDPQSGLLRPVHSFDFEELVDRSSRRS 703
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
DP+ I +EI + V A D+G P LS + I V+D+NDN
Sbjct: 704 DPQAGGSFSI-----------------REIDLLVRARDSGIPMLSTVVPVLIYVQDVNDN 746
Query: 110 EPMFDRVQY 118
P+F R Y
Sbjct: 747 APIFQRTFY 755
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + + YRI G KF I+ ETG++ +
Sbjct: 770 LQVTAIDRDGSAPNNVVVYRI--QTGASDKFIINSETGVISVAQGAN------------- 814
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
LD D + ++ +Y ++VIA D G QL CT+ I+++D+N+ P+
Sbjct: 815 -------LDPDLTDSKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL 863
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 46/111 (41%), Gaps = 28/111 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+DVD TI Y + P RA +D +TG EI + +
Sbjct: 1006 VLASDVDKNR---TITYALEGNPTYRALMHLDSQTG-----------------EIVVASK 1045
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I D E+ + + +V A D+G P S + ITV D NDN P F
Sbjct: 1046 I--------DHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYF 1088
>gi|441600758|ref|XP_004087637.1| PREDICTED: protocadherin-15 isoform 1 [Nomascus leucogenys]
Length = 1674
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPGGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N + Y + G+++ +F+I+ +TG + T LDR
Sbjct: 826 VSATDSDVGKNA-QVTYSLDTDGGDQSASEFTINPQTGAITTTRPLDR------------ 872
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 873 -------------ELIPAYLLTVTARDGGVPPLSDTTDVEISVTDVNDNSPVFEAPQY 917
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y + G+ A F++D TGI++T LDR+ R Y+
Sbjct: 932 LRVSATDADTDLNG-RVRY-ALDDDGDGA-FAVDSTTGIIRTAKPLDRESVAR----YV- 983
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ IA D G+P LS + I +EDIND+ P F+
Sbjct: 984 --------------------LKAIAMDRGSPSLSTTVPVTIKIEDINDSPPAFE 1017
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
+++ A D D +N I+Y I A E ++ ETG + T LDR+ R +
Sbjct: 610 LRIQAYDADEGANA-QIKYTIGARDFSGASTENFPITVSSETGWIYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
TVIA D+G S + T+ +TV D+NDN+P FD
Sbjct: 669 -------------------------FTVIAADSGEAPKSASATVILTVTDVNDNDPYFDP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID +G V + LD
Sbjct: 506 RIRATDADS-GNNAAVRYAIIGGNTQNT-FSIDSMSGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V+D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVHVKDVNDNAPRF 590
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T LD
Sbjct: 487 VRVTARDPDQGTNG-QVTYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 532
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 533 --------------ELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 577
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D +G++ TL ALDR
Sbjct: 1662 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNSGVLTTLRALDR------------ 1704
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G P L T+++TVED ND+ P F
Sbjct: 1705 -------------EEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTF 1744
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1120 RVFATDKDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1165
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1166 ------------EQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTF 1205
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2554 DFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2600
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1597 VRPLDR---EQRAEHVLTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEY 1647
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2184 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2235
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2236 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2268
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 424 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 471
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 30/107 (28%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD--DPEREKEIYITTDIRVQ 66
+PP G + + R FS+D +G++KTL LDR+ P E E+
Sbjct: 810 NPPGRLGPVTL-TLSGGDPRGLFSLDSASGLLKTLRPLDRELLGPVLELEV--------- 859
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+GTP + A +++ ++D+NDN P F
Sbjct: 860 ------------------RAGSGTPPVFSAARIRVLLDDVNDNSPAF 888
>gi|441600764|ref|XP_004087639.1| PREDICTED: protocadherin-15 isoform 3 [Nomascus leucogenys]
Length = 1681
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPGGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|348514387|ref|XP_003444722.1| PREDICTED: protocadherin beta-1-like [Oreochromis niloticus]
Length = 622
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 69 DRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
DRD D ER E ITVI D G P LS + T+ + + DINDN P+F++
Sbjct: 407 DRDLDRERASEYNITVICTDEGVPSLSSSVTLTVEIVDINDNAPLFEK 454
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ I + + AED G PQ++ + +TV D+NDN P F + Y
Sbjct: 202 DREKQEHISLVLTAEDGGEPQMTGTMKIYVTVLDVNDNAPAFSKPVY 248
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
Q LDR E+ + + + + A D G PQLS ++ITV D+NDN P+F +
Sbjct: 517 QPLDR---EKTEHLSLVLTAVDGGEPQLSGTMQIQITVLDVNDNAPVFTK 563
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDMGPNG-TVKYSI--SAGDRSRFQIHAKSGVISTKMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + +TV D DN P+F + Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L ALD + EI
Sbjct: 913 FQAKAVDPDEGVNG-RVLYSLKQNP--KNLFTINEQNGNISLLGALDVHAGSYQVEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------VASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISY 1001
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A ++ F +D +G + T +LDR+ E+ Y
Sbjct: 603 LVLGATDRDLGDNG-TVRFSLQEAENDQRLFRLDPVSGRLSTASSLDRE----EQAFYC- 656
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D G+P S + +++ DINDN P+F VQY
Sbjct: 657 --------------------LSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 694
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y I+K ER +F+ID +G V + LD
Sbjct: 1219 LRVSASDVDEGSNG-LIHYSILKGNEER-QFAIDSFSGQVTLVGKLDY------------ 1264
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1265 -------------EATSAYSLLIQAVDSGAIPLNSTCTLSINILDENDNTPSFPK 1306
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRI+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIVSG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D N I+Y I I A E ++D TG + T LDR+D
Sbjct: 646 VKVQAYDADEGPNA-DIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDRED----- 699
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ + VIA D GTP S + ++ ITV+D+NDN+P+F+
Sbjct: 700 --------------------QSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFE 738
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I Y + + E F ID +G+++T LDR E
Sbjct: 966 VQVSATDADVGLNG-KISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDR-------ESVAV 1017
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ A+DR G+P LS + + I ++DIND+ P FD
Sbjct: 1018 YELEAYAIDR------------------GSPTLSSSVPVTIHIDDINDSPPAFD 1053
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N I Y + + A+F+I+ +TG + T LDR
Sbjct: 862 VSATDNDVGLNA-QITYSLGEDGDHPAEFTINPQTGAIITTRTLDR-------------- 906
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I++ D+NDN P+F + Y
Sbjct: 907 -----------ETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAY 951
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++F+ID TG V + LD
Sbjct: 542 HIKATDADQ-GNNAAIRYAIISG-NTQSQFAIDSLTGDVSLVKPLDY------------- 586
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + + A+D G+P S+ + I V+D+NDN P F
Sbjct: 587 ------------ETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRF 626
>gi|115387123|ref|NP_149045.3| protocadherin-15 isoform CD1-4 precursor [Homo sapiens]
gi|116242702|sp|Q96QU1.2|PCD15_HUMAN RecName: Full=Protocadherin-15; Flags: Precursor
gi|14581464|gb|AAK31804.1| protocadherin 15 [Homo sapiens]
gi|162318576|gb|AAI56451.1| Protocadherin 15 [synthetic construct]
Length = 1955
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|119574537|gb|EAW54152.1| protocadherin 15, isoform CRA_b [Homo sapiens]
Length = 1954
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 652 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 707
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 708 VVTDVNDNAPVFD 720
>gi|15072441|gb|AAK31581.1| protocadherin 15 [Homo sapiens]
Length = 1955
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|218505775|ref|NP_001136235.1| protocadherin-15 isoform CD1-1 precursor [Homo sapiens]
Length = 1962
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|218505777|ref|NP_001136236.1| protocadherin-15 isoform CD1-2 precursor [Homo sapiens]
Length = 1957
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N I YRII G ++F+I+ TG + T LDR+ KE Y
Sbjct: 2352 LLVNASDADASTNA-VISYRII---GGNSQFTINPSTGQIITSALLDRE----TKENYT- 2402
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+ V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2403 --------------------LVVVSSDAGSPEPLSSSASVLVTVTDVNDNPPRFQHHPY 2441
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3498 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3544
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++VI D+G PQ+S T+ ITV D NDN
Sbjct: 3545 -------------EQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDN 3580
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEIVASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 1001
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LVLRATDRDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTVTSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQY 694
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3396 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDR-------------- 3440
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3441 -----------ETLPVYNLTVLAIDSGTPSATGSASLLVTLEDINDNGPML 3480
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y ++K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSVMKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
K Y L + + + + +++V Q+LDR E ++ + + A D+G+P L+ T+
Sbjct: 2262 KLSYVLFGGNEDNAFTLSASGELQVTQSLDR---ETKEHFVLMITATDSGSPALTGTGTI 2318
Query: 100 KITVEDINDNEPMFDRVQY 118
+ V+D+NDN P F Y
Sbjct: 2319 NVIVDDVNDNVPTFASKMY 2337
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2038 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2082
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2083 -------------EEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQALY 2127
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2142 IQVYAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------ 2187
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND PMF+ Y
Sbjct: 2188 -------------EKTPTYSLTVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPY 2232
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ +LDR
Sbjct: 2658 LTVSAMDKDSGPNG-QLDYEIVNGNKEHS-FTINHATGEIRSIRSLDR------------ 2703
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2704 -------------EKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2746
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E + DR+ R++ + TVIA D
Sbjct: 1124 AIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3081 VSARDRDAAMNG-LIRYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3131
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3132 ------------------MTITATDGGWVARTGYCSVTVNVIDVNDNSPVF 3164
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|218505785|ref|NP_001136240.1| protocadherin-15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|339235513|ref|XP_003379311.1| putative cadherin EGF LAG seven-pass G-type receptor 3 [Trichinella
spiralis]
gi|316978069|gb|EFV61093.1| putative cadherin EGF LAG seven-pass G-type receptor 3 [Trichinella
spiralis]
Length = 1072
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N I Y E F ID +G+V+ LDR
Sbjct: 781 LHLTATDSDYGINS-RITYHFSDEDPENDAFQIDPSSGVVRVARPLDR------------ 827
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER ITV+A+D G P L T+ I V+D+NDN P FDR Y
Sbjct: 828 -------------ERRAVYEITVLAKDKGEPPLIGRTTLVINVDDVNDNAPKFDREAY 872
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ R K + VIA D+G P LS + +++ ++D+NDN P+F R +Y
Sbjct: 719 LDRESQSRFK---LKVIATDHGQPPLSGSMDLEVVLDDVNDNAPVFSRTRY 766
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG ++Y I+ E +FSID TG
Sbjct: 365 VMARDRDFGHNG-EVKYSIVSGNAE-GRFSIDYNTG------------------------ 398
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V+ +DR D + + + A+D+ T LS+ ++I + D+ND+ P F
Sbjct: 399 -EVRLVDRVDYRQTDHYELVIRAQDSATFSLSNTTLLEIRIRDVNDHAPQF 448
>gi|218505798|ref|NP_001136245.1| protocadherin-15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|218505789|ref|NP_001136242.1| protocadherin-15 isoform CD2-2 precursor [Homo sapiens]
Length = 1539
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|218505781|ref|NP_001136238.1| protocadherin-15 isoform CD1-7 precursor [Homo sapiens]
Length = 1952
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|297714460|ref|XP_002833664.1| PREDICTED: protocadherin-16, partial [Pongo abelii]
Length = 598
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 492 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 537
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 538 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 582
>gi|218505783|ref|NP_001136239.1| protocadherin-15 isoform CD1-8 precursor [Homo sapiens]
Length = 1915
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 613 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 668
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 669 VVTDVNDNAPVFD 681
>gi|358334159|dbj|GAA52605.1| protocadherin-1 [Clonorchis sinensis]
Length = 1332
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 30/114 (26%)
Query: 3 VHATDVDPPSNGG---TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V ATD D NG +++ AP KFSID ETG + L DR
Sbjct: 608 VRATDEDEGPNGRINYALKHSDDNAPDN--KFSIDAETGQLFALGPFDR----------- 654
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+E++ + V+A D+G P+L+ CT+++ V D+NDN P F
Sbjct: 655 --------------EQERKHRLVVVAMDHGEPKLTGLCTVEVIVMDVNDNAPFF 694
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V A D D N I+Y I I A E ++D TG + T LDR+D
Sbjct: 646 VKVQAYDADEGPNA-DIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDRED----- 699
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ + VIA D GTP S + ++ ITV+D+NDN+P+F+
Sbjct: 700 --------------------QSKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFE 738
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I Y + + E F ID +G+++T LDR E
Sbjct: 966 VQVSATDADVGLNG-KISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDR-------ESVAV 1017
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ A+DR G+P LS + + I ++DIND+ P FD
Sbjct: 1018 YELEAYAIDR------------------GSPTLSSSVPVTIHIDDINDSPPAFD 1053
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N I Y + + A+F+I+ +TG + T LDR
Sbjct: 862 VSATDNDVGLNA-QITYSLGEDGDHPAEFTINPQTGAIITTRTLDR-------------- 906
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I++ D+NDN P+F + Y
Sbjct: 907 -----------ETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAY 951
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++F+ID TG V + LD
Sbjct: 542 HIKATDADQ-GNNAAIRYAIISG-NTQSQFAIDSLTGDVSLVKPLDY------------- 586
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + + A+D G+P S+ + I V+D+NDN P F
Sbjct: 587 ------------ETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRF 626
>gi|195501550|ref|XP_002097843.1| GE24248 [Drosophila yakuba]
gi|194183944|gb|EDW97555.1| GE24248 [Drosophila yakuba]
Length = 1987
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD----------RD 49
+Q+ A D D + + Y I++ R+ F+ID ++G+++ +++ D R
Sbjct: 647 LQLEARDADLNGTENSQVTYEIVEGL-YRSNFTIDPQSGLLRPVHSFDFEELVDRSSRRS 705
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
DP+ I +EI + V A D+G P LS + I V+D+NDN
Sbjct: 706 DPQTGGSFSI-----------------REIDLLVRARDSGIPMLSTVVPVLIYVQDVNDN 748
Query: 110 EPMFDRVQY 118
P+F R Y
Sbjct: 749 APIFQRTFY 757
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + + YRI G KF I+ ETG++ +
Sbjct: 772 LQVTAIDRDGSAPNNVVVYRI--QTGASDKFIINSETGVISVAQGAN------------- 816
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
LD D + ++ +Y ++VIA D G QL CT+ I+++D+N+ P+
Sbjct: 817 -------LDPDLTDSKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL 865
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+DVD TI Y + P R+ +D +TG EI +
Sbjct: 1006 VNVLASDVDKNR---TITYALEGNPTYRSLMHLDSQTG-----------------EIVVA 1045
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I D E+ + + +V A D+G P S + ITV D NDN P F
Sbjct: 1046 SKI--------DHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYF 1090
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T LD
Sbjct: 474 VRVTARDPDQGTNG-QVTYSL--APGTHTHWFSIDPTSGIITTAATLDY----------- 519
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L + T+ + ++D+NDNEP F R Y
Sbjct: 520 --------------ELEPQPQLIVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFY 564
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG Q GE FS+D +G++ TL ALDR
Sbjct: 1649 LTLKATDPDLGANG---QVTYGGVSGE--SFSLDPNSGVLTTLRALDR------------ 1691
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A D G P L T+++TVED ND+ P F
Sbjct: 1692 -------------EEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTF 1731
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1107 RVFATDKDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1152
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1153 ------------EQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTF 1192
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV A D G P S A + +TV D+NDN P+F R Y
Sbjct: 2541 DFESLTQYNLTVTAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASY 2587
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1584 VRPLDR---EQRAEHVLTVVASDHGSPPRSSTQLLTVSVVDVNDEAPAFPQQEY 1634
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2171 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPATGTITTTAILDR-------EIWAE 2222
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2223 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2255
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 68 LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E+++Y + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 411 LDRE----ERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 458
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 30/107 (28%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD--DPEREKEIYITTDIRVQ 66
+PP G + + R FS+D +G++KTL LDR+ P E E+
Sbjct: 797 NPPGRLGPVTL-TLSGGDPRGLFSLDSASGLLKTLRPLDRELLGPVLELEV--------- 846
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+GTP + A +++ ++D+NDN P F
Sbjct: 847 ------------------RAGSGTPPVFSAARIRVLLDDVNDNSPAF 875
>gi|449267086|gb|EMC78052.1| Protocadherin-24, partial [Columba livia]
Length = 1272
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Query: 2 QVHATDVDPPSNGGT-IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q+ A D D P N + + +RI+ P F+I++ TG + + LDR+ E E+
Sbjct: 597 QIQAIDNDEPGNPNSKVGFRILPGPFSN-NFTINEITGEMHSKEPLDREALEDER----- 650
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +TV D+G PQLS + ITV D+NDN P+F Y
Sbjct: 651 ----------------GQMVVTVEVYDHGVPQLSTLVNVTITVGDVNDNAPVFLNQSY 692
>gi|241811212|ref|XP_002414573.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
gi|215508784|gb|EEC18238.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
Length = 2790
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++LDR ERE ++ VIA D G PQLS T+ + VEDINDN P F+
Sbjct: 408 RSLDR---ERESKLEFLVIAFDGGIPQLSGTTTVAVQVEDINDNPPYFE 453
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA+D D S G + YRI +A +R F ID +TG + + LD
Sbjct: 1201 VQVHASDPDEGS-AGKVVYRIARAT-KRETFRIDSQTGKITLVSPLDY------------ 1246
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPMF 113
E+ K + + V A D+ PQ + +++TV D+NDN P F
Sbjct: 1247 -------------EQIKHLEVFVEARDDANEPQFA-TTIVQVTVNDVNDNAPEF 1286
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D D NG + Y++ G KF ID + G V TL LD
Sbjct: 2247 QIRAFDPDTGENG-LVFYKL--GGGHDNKFYIDSKDGTVWTLSKLDF------------- 2290
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++ +TVIA D G P +S + +TV D ND P F + Y
Sbjct: 2291 ------------EKQEFYNMTVIAYDQGKPSMSAMAKLWVTVTDRNDVVPEFPKSVY 2335
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 25/99 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G + Y II + F +D TG E++ T LDR E
Sbjct: 2153 GAVDYAIISRKDQNLPFHVDVHTG-----------------ELFAT-----GVLDR---E 2187
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ Y V+A DNG P + + +T+ED ND +P F
Sbjct: 2188 TKFNYYFHVLALDNGDPPQNSTVNVTVTIEDANDEKPRF 2226
>gi|432864259|ref|XP_004070252.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3342
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHA D D +NG ++Y ++ F I +TG++ T DR
Sbjct: 1478 LQVHAVDADEGANG-KVKYGLMHRDSATPAFRIYPDTGVIVTARRFDR------------ 1524
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ITV A D L C + + + D NDN P F+ ++Y
Sbjct: 1525 -------------ERQREYSITVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRY 1569
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Query: 43 LYALDRDDPEREKEI------YITTDIRVQ----------ALDRDDPEREKEIYITVIAE 86
L+ +DRD PE + + D +Q L R D ER+ E ++ VI
Sbjct: 2454 LHVVDRDSPEHGPPFLLSLPSFYSADFHLQDHGNGSATLTTLRRFDRERQSEFHLPVIMI 2513
Query: 87 DNGTPQLSDACTMKITVEDINDN 109
D+G P ++ T+ IT+ D NDN
Sbjct: 2514 DSGIPPITATNTLTITIGDHNDN 2536
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + + G+ F ID + G++ T DR+ + Y+
Sbjct: 1796 LQVSAHDKDLGLNGEITYSLLNDSSGDHRLFRIDPKYGVIFTEAVFDRE----ARSSYL- 1850
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VQ+ D ++ R + N P +D +++ + D+NDN+P+F + Y
Sbjct: 1851 --LEVQSEDGEESARPGK---------NKQPN-TDTAYVRVFISDVNDNKPVFAQRLY 1896
>gi|390480000|ref|XP_003735826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked-like
[Callithrix jacchus]
Length = 1386
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD+D NG AP E F +D+ TG++ + LDR
Sbjct: 526 KVSATDIDSGPNGEISYLLGTDAPPE---FDLDRRTGMLTAVKKLDR------------- 569
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ T++A+DNG P L+ ++ + V D NDN P+F +Y
Sbjct: 570 ------------EKQEKYLFTILAKDNGVPPLTSNVSVFVNVLDQNDNSPVFTHNEY 614
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 41 KTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIYIT-VIAEDNGTPQLSDACT 98
+ ++ LD + PE +K ++ I + LDR+ EK+ Y+ V ED G+PQ S
Sbjct: 221 QNIFGLDVIETPEGDKVPHL---IVQKELDRE----EKDTYVMKVKVEDGGSPQKSSTAI 273
Query: 99 MKITVEDINDNEPMF 113
++++V DINDN P+F
Sbjct: 274 LQVSVTDINDNHPVF 288
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 25/84 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 654 SFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGG 688
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 689 RVSRSSSAKVTINVVDVNDNKPVF 712
>gi|345784179|ref|XP_003432524.1| PREDICTED: protocadherin-18, partial [Canis lupus familiaris]
Length = 1108
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 397 DREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRY 443
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 172 IVVRELDR---ELRASYELLLTASDLGVPQRSGSSVLKISISDSNDNSPAFEQPSY 224
>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
queenslandica]
Length = 7953
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D SNG I Y + P F+ID TG+++T L+R
Sbjct: 4933 VSATDLDSTSNG-EISYSF-ENPDTLQYFTIDNTTGVIRTASELNR-------------- 4976
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ +TV+A D G L+ + T+ ++V DINDN P F +Y
Sbjct: 4977 -----------EEQQSYTLTVLATDAGDIPLTGSATVDVSVLDINDNTPSFSATEY 5021
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+ATD D SNG +I Y + F ID TG + + +LDR+ TT
Sbjct: 5037 VNATDPDNGSNG-SITYSL---SNTVTLFRIDGVTGDIYAIGSLDRE----------TTS 5082
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+V V A D G P + + + ++V D+NDN PMF
Sbjct: 5083 SQV---------------FVVYAADGGNPSRTSSAAVNVSVIDVNDNSPMF 5118
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D E E V+A D G P + + +TV+D+NDN P+ D V
Sbjct: 3635 DRESVSEYTFNVVATDGGHPSRNSTAQVIVTVQDVNDNSPVIDLV 3679
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A DVD SN RI+ F ID TG++ + LD
Sbjct: 6229 LTVQARDVDSGSNS-----RIVYEITGTVTFIIDATTGVISLVGELDY------------ 6271
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E I V+A D+G + + ITV ++NDN P F
Sbjct: 6272 -------------ETETSIVFDVLARDSGIQEQVSTAVVNITVTNVNDNPPSF 6311
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A + P +S + I V DINDN P+FD+ +Y
Sbjct: 3124 DYEMKPVFSLLVVASEVAMPNMSGYANLLIHVNDINDNRPLFDQDEY 3170
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D PSN I Y I +R F+ID+ T ++ T D + IT
Sbjct: 6012 VSVAASDGDLPSN--QITYYISGKDADR--FTIDQSTSVILTAAVFDAE---------IT 6058
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDN-GTPQLSDACTMKITVEDINDNEPMFD 114
T + V AED+ G+ S + + I V DINDN P+FD
Sbjct: 6059 TALS----------------FNVTAEDSYGSVVQSSSAPVSIVVIDINDNAPLFD 6097
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+E+ V +D+GTP + I V D NDN P+F + Y
Sbjct: 6168 DYEKEQMFDFIVTCQDSGTPSRQSNVPVTINVADANDNAPVFSQDMY 6214
>gi|194591877|gb|ACF76478.1| protocadherin-15-CD3 isoform 1 [Homo sapiens]
Length = 1675
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|441600767|ref|XP_004087640.1| PREDICTED: protocadherin-15 isoform 4 [Nomascus leucogenys]
Length = 1789
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPGGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|218505793|ref|NP_001136244.1| protocadherin-15 isoform CD3-2 precursor [Homo sapiens]
Length = 1677
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2405 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2450
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+++E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2451 --------------EQQREYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 2495
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREK----EIYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1198 FTIDTRNGFIKTLRPFDR-------EALVKVSRSAEAGGEDASLRGSVAGNYMLLEATVS 1250
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1251 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1282
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1983 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 2031
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TG+V P+ ++E+
Sbjct: 1623 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGVVTF-----TPGPQFKQEVRYQ 1674
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLS 94
++ R E+YIT+I +G + S
Sbjct: 1675 LTLKATDEAVQSERRSSEVYITIITPGSGGSESS 1708
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I ER FS+D+ TG + LD D
Sbjct: 3248 LTVGATDEDTGPNG-MLRYSI-SGGNERQDFSVDERTGGIVIQQQLDYD----------- 3294
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+FD+ +Y
Sbjct: 3295 --------------LIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFDQKEY 3338
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A+D D P NGG Y+++ ++ S+D+ +G+V++ + DR EI
Sbjct: 3670 MTLMASDPDLPRNGGPFTYQLVGGK-HKSWLSVDRSSGVVRSTTSFDR-------EITPV 3721
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++ D P+++ + +T+ + + N P S ++ I V N + P
Sbjct: 3722 LEAIIEVEDSGKPKQKAQHLVTITVLDQNDNP--STTRSLHIAVSLFNGDLP 3771
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 446 VRVNGVLDREEIGKYN---LTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1512 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1563
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1564 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1600
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2297 LQVSATDVDEGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2342
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2343 -------------ERLARYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2383
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 2536 RFHIDSETGEISTATTLDRE----ETSVY---------------------HLTLMAQDSS 2570
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2571 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 2600
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + + FSID TG V + A+ + Y+ +
Sbjct: 3033 QILATDRDKQGPNSVISYSLQQP---SPMFSIDPATGEVFSKKAV-----RFKHSQYVRS 3084
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ AL TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 3085 PENMYAL-------------TVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQEEY 3128
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + + T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLATTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D S Y II + F ID +TG + T LDR+
Sbjct: 3566 VKAVDKDVRSQNNQFSYSIING-NLKQSFKIDVQTGEISTASRLDRE------------- 3611
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 3612 -------------EIATYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 3650
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P + + I + D NDN P+FD QY
Sbjct: 2225 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQATETQLLIRILDENDNSPVFDPKQY 2282
>gi|441600761|ref|XP_004087638.1| PREDICTED: protocadherin-15 isoform 2 [Nomascus leucogenys]
Length = 1782
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 657 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPGGTSTATVNI 712
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 713 VVTDVNDNAPVFD 725
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D +N I YRII G ++F+I+ TG + T LDR
Sbjct: 727 LLVNASDADASTNA-VISYRII---GGNSQFTINPSTGQIITSALLDR------------ 770
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 771 -------------ETKDNYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 816
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 1875 LQSTDPDLPPNQGPFTYYLLSTGPATNYFSL-SAAGVLSTTREIDR-------------- 1919
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ Y++V+ D+G PQ+S T+++TV D NDN
Sbjct: 1920 -----------EQIAHFYLSVVTRDSGVPQMSSTGTVRVTVIDQNDN 1955
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
K Y L + + + ++RV ++LDR+ ER +T+ A D+G+P L+ T+
Sbjct: 637 KLSYVLVGGNEDNAFTLSAGGELRVTRSLDRETKER---FVLTITATDSGSPALTGTGTV 693
Query: 100 KITVEDINDNEPMFDRVQY 118
+ V+D NDN P F Y
Sbjct: 694 HVVVDDANDNIPTFASKMY 712
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI +TG + LDR
Sbjct: 1771 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSIHPQTGQITVTAELDR-------------- 1815
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 1816 -----------ETLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 1855
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG I Y I+ E + FSI+ TG ++++ LDR
Sbjct: 1033 LTVSAMDKDSGPNG-QIDYEIVNGNKEHS-FSINHATGEIRSIRPLDR------------ 1078
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 1079 -------------EKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPKFSQI 1121
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
YAL P K T D V+ D E +TV+A D G P LS + + + V
Sbjct: 430 YALL--SPSGSKFSIGTIDAEVRLTGELDREAVSNYTLTVLATDKGQPALSSSAEVVVVV 487
Query: 104 EDINDNEPMFDRVQY 118
DINDN P F + Y
Sbjct: 488 LDINDNSPAFAQALY 502
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TG++ ALD + ++ +
Sbjct: 1456 VSARDRDAAMNG-VIRYSI-SSGNEGGVFAINSSTGVLTLAKALDYELCQKHE------- 1506
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TV A D G + C++ + V D+NDN P+F
Sbjct: 1507 ------------------MTVSATDGGWVARTGYCSVTVNVIDVNDNSPVF 1539
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 1238 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFSKQ 1276
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F +++Y
Sbjct: 1277 VLKYQNVSGFSNVNINRHSFIVTSSDRGNPSLLSETTVTINIVDSNDNAPQFLKMKY 1333
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ ++ F ID TG V LDR
Sbjct: 517 VQVCAADADEGTNG-QVRYGIVDGNADQ-DFRIDSVTGAVTVARPLDR------------ 562
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + D ND P F+ Y
Sbjct: 563 -------------EKTSTYLLTVQAADRGSTPRTDTSTVSIVLLDSNDFVPTFELSPY 607
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER ++ + + A D G P S + ITV D+NDN P+F
Sbjct: 973 DFERIQKFVVWIEARDGGFPPFSSYEKLDITVLDVNDNSPVF 1014
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + FSI+++TG + + LD + + EI
Sbjct: 947 FQAKALDPDEGVNG-MVLYSLKQNP--KGLFSINEQTGAISLIGQLDINAGTYQVEI--- 1000
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + ++V D+NDN P+FD++ Y
Sbjct: 1001 -----------------------LASDMGVPQLSSTFVLTVSVHDVNDNPPVFDQLSY 1035
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD +NG I Y +IK E +F+ID TG V + LD
Sbjct: 1264 LRVSASDVDEGTNG-LIHYSVIKG-NEEKQFAIDSSTGQVTLVGKLDH------------ 1309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G LS CT+ I V D NDN P F +
Sbjct: 1310 -------------EATASYSLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSFPK 1351
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+ ++F + +TGI+ T ALDR+ EK Y
Sbjct: 745 VSATDPDMGPNG-TVKYSI--SAGDTSRFQVHGKTGIITTKIALDRE----EKTAY---- 793
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 794 -----------------QLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQGMY 832
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + + D E + + V+A D G+P LS + +++ D+NDN P+F VQY
Sbjct: 674 KLSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQY 728
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y +++ G KFSI G V+ + LDR
Sbjct: 2104 FKAQATDPDSGPNS-YIEYSLLRPLGN--KFSIGTIDGEVRLIGELDR------------ 2148
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2149 -------------EAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLY 2193
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ++D D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3562 MTLQSSDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLTTTREIDR------------ 3608
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++VI D+G PQ+S T++I V D NDN
Sbjct: 3609 -------------EQISDFYLSVITRDSGIPQMSSTGTVQIKVIDQNDN 3644
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG I Y II+ E + FSI++ TG ++++ LDR
Sbjct: 2722 LTVAAVDRDSGLNGQLI-YEIIEGNTENS-FSINRATGEIRSVRPLDR------------ 2767
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ A D GTP S + I V D NDN P F ++
Sbjct: 2768 -------------EKLSRYTLTIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQI 2810
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 44 YALDRDDPEREKEIYITTDIR-VQALDRDDPEREKE---IYITVIAEDNGTPQ-LSDACT 98
Y+ + P+ E IT +IR DR+ R++ +TVIA D G P+ L D T
Sbjct: 1171 YSFEHMQPDFELNT-ITGEIRSTHQFDREALMRQRGAAVFSLTVIATDQGLPKPLKDQAT 1229
Query: 99 MKITVEDINDNEPMF 113
++I ++DINDN P F
Sbjct: 1230 VQIYMKDINDNAPKF 1244
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+++D D N +I+ G ++F+I+ TG + T LDR
Sbjct: 2418 LLVNSSDADASRNA------VIRLTGGNSQFTINPSTGQIITSALLDR------------ 2459
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+A D G P+ LS + ++ + V D+NDN P F Y
Sbjct: 2460 -------------ETRENYTLIVVASDGGYPRALSSSTSVLVAVADVNDNPPKFQHHPY 2505
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D +NG ++Y I+ G+ +F ID TG++ LDR
Sbjct: 2208 IQVLATDGDEGTNG-QVRYSIVS--GDTGNQFRIDSVTGVITVAKPLDR----------- 2253
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ ++V + D G+ +D T+ I ++D+ND P F+ Y
Sbjct: 2254 --------------EKKPSYMLSVQSSDRGSSPRTDTTTVNIVLKDVNDYVPTFELSPY 2298
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 26/115 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + + + FSI+ +TG V LDR
Sbjct: 3460 VSAFDSDSVPSWSRFSY-FIGSGNDNSAFSINPQTGQVTVTAELDR-------------- 3504
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E ++V+A D+GTP + + ++ +T+EDINDN P Q
Sbjct: 3505 -----------ETLPVYNLSVLAIDSGTPSATGSASLLVTLEDINDNGPTLSTRQ 3548
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+VHATD D NG I Y II+ A F I + ++YI
Sbjct: 1050 FKVHATDKDSGVNG-EIAYSIIEGNAGDA-FGIFPD------------------GQLYIK 1089
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ LDR+ ER + V+A D L+ + + +ED+NDN P+F+ Y
Sbjct: 1090 SE-----LDRELQER---YILLVVASDRAVEPLNATVNITVILEDVNDNRPLFNSTNY 1139
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 41 KTLYALDRDDPEREKEIYITTDIR-VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
K Y L + E + + ++R VQ+LDR ER+++ + + A D+G+P L+ T+
Sbjct: 2328 KLTYVLVSGNEEGAFILSASGELRLVQSLDR---ERKEQYVLLITAADSGSPALTGTGTI 2384
Query: 100 KITVEDINDNEPMFDRVQY 118
+TV+D+NDN P F Y
Sbjct: 2385 TVTVDDVNDNVPTFAFNMY 2403
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 35/124 (28%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP------GERAKFSIDKETGIVKTLYALDRDDPERE 54
+QV A D D +N I+YR+ F +D E+G+++
Sbjct: 255 LQVAAADADEGTNA-DIRYRLEGGDGGGGEGASSLPFEVDPESGVIR------------- 300
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
IR +R D E ++ +TV A D G P LS I + D+NDNEP
Sbjct: 301 --------IR----ERLDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEP--- 345
Query: 115 RVQY 118
RV++
Sbjct: 346 RVKF 349
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2927 QVSATDPDEGSNGHVFYF--IKSQSEF--FRINATTG-----------------EIFNKQ 2965
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R Q V + D G+P L T+ I + D NDN P+F +Y
Sbjct: 2966 YLRYQNSSGSSNVNINRHSFIVTSSDRGSPPLLSETTVTINIVDSNDNAPLFLAPKY 3022
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D +NG YRI+ E +F ++ TL +P E +
Sbjct: 144 ATDADSGTNGVDHSSYRIVSG-NEEGRFRLNI------TL------NPSGEGAFLHL--V 188
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + V ED G P+ + +TV+DINDN P+F + Y
Sbjct: 189 SQGGLDR---EATPSYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFSQTLY 240
>gi|195145920|ref|XP_002013938.1| GL24414 [Drosophila persimilis]
gi|194102881|gb|EDW24924.1| GL24414 [Drosophila persimilis]
Length = 836
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D+D + I Y I++ R+ F+ID ++G+++ L+ D ++ +
Sbjct: 636 LQLEARDLDLNGTENSQITYEIVEGL-YRSNFTIDPQSGLLQPLHHFDFEE-------LV 687
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD R R +EI + V A D+G P LS + I V+D+NDN P+F + Y
Sbjct: 688 DTDRRSV---RQAGGSMREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNPPIFQKSFY 743
>gi|241148644|ref|XP_002405852.1| protocadherin fat, putative [Ixodes scapularis]
gi|215493767|gb|EEC03408.1| protocadherin fat, putative [Ixodes scapularis]
Length = 1590
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 22 IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALD------RDDPER 75
I A ER F ID TG+V T LDR E+ ++++ A D D E
Sbjct: 506 IAAGNERLWFKIDANTGLVTTARPLDR-------ELQDLVELKISAKDGGPNPFSRDREL 558
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + V+A+D G+P S T++++V D++D+ P F QY
Sbjct: 559 QSNYNVLVVAKDQGSPARSSTATVQVSVIDVDDHRPRFYPTQY 601
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D D SNG + YRI+ A E A+F + +V T +P E T +
Sbjct: 183 ASDGDAGSNGLSTDYRIV-AGNEDARFRL-----VVTT-------NPSGE-----TPFLH 224
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ R D E + V A D GTP + ++V D+NDN PMFD Y
Sbjct: 225 LETTGRLDREARDAYTLNVSASDGGTPPRLGYLQVNVSVLDVNDNPPMFDHSDY 278
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++++ + P +G +++R+ P A F +D TG+V+ L L
Sbjct: 770 LELYVPEASDPDDGVNADLEFRLESGPA--ALFGVDARTGMVRLLRPL------------ 815
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R QA KE + + A D G P+LS + I VED+ND+ P F+R Y
Sbjct: 816 -----RTQA--------GKEFALELAASDRGQPRLSSKQQLLIRVEDVNDHTPTFERPSY 862
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D +NG + Y+I + A F++ +TG+V T +DR+ + K
Sbjct: 1301 VTVTAVDRDSAANG-RVTYQITGQEPQGAHFTVRPDTGVVLTAAEIDREFSDTFK----- 1354
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G P L T+ I VED+NDN P F
Sbjct: 1355 --------------------LTLTATDQGNPGLFSHKTVTIIVEDVNDNAPAF 1387
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 68 LDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
LDR D E++ + + A D G+P+ S A + + V D+NDN P F V
Sbjct: 1235 LDRPLDFEQQSSYTLNITASDGGSPRQSSALSFSVRVLDVNDNPPQFANV 1284
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 22/126 (17%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETG-IVKTLYALDRDD-PEREKEIYITTD--- 62
VD + I++R+ AP A + + G +V + +D D+ P + + I
Sbjct: 373 VDANDHEPVIRFRVFTAPDSYATVDENAQNGSVVAAVSVIDHDEGPNGDTVVQIHGGNEL 432
Query: 63 -------------IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
+RV LDR ER +TV A D G+P S + I V D+ND
Sbjct: 433 GHFRLEKTPSFDIVRVNGVLDR---ERVSRYNLTVTATDRGSPARSSTAYLLILVNDVND 489
Query: 109 NEPMFD 114
+EP D
Sbjct: 490 HEPHRD 495
>gi|125774425|ref|XP_001358471.1| GA17420 [Drosophila pseudoobscura pseudoobscura]
gi|54638208|gb|EAL27610.1| GA17420 [Drosophila pseudoobscura pseudoobscura]
Length = 1978
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D+D + I Y I++ R+ F+ID ++G+++ L+ D ++ +
Sbjct: 636 LQLEARDLDLNGTENSQITYEIVEGL-YRSNFTIDPQSGLLQPLHHFDFEE-------LV 687
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD R R +EI + V A D+G P LS + I V+D+NDN P+F + Y
Sbjct: 688 DTDRRSV---RQAGGSMREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNPPIFQKSFY 743
>gi|194591875|gb|ACF76477.1| protocadherin-15-CD2 isoform 2 [Homo sapiens]
Length = 1520
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|348582162|ref|XP_003476845.1| PREDICTED: protocadherin-18-like [Cavia porcellus]
Length = 1134
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 423 DREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRY 469
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 198 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 250
>gi|218505791|ref|NP_001136243.1| protocadherin-15 isoform CD3-1 precursor [Homo sapiens]
Length = 1682
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|119574536|gb|EAW54151.1| protocadherin 15, isoform CRA_a [Homo sapiens]
Length = 1401
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|332834285|ref|XP_507798.3| PREDICTED: protocadherin-15 [Pan troglodytes]
Length = 1765
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 637 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 692
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 693 VVTDVNDNAPVFD 705
>gi|432099087|gb|ELK28490.1| Protocadherin-18 [Myotis davidii]
Length = 1067
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 356 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQISDINDNPPHFQRSRY 402
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P+F++ Y
Sbjct: 131 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPVFEQQSY 183
>gi|326435630|gb|EGD81200.1| tyrosine phosphatase [Salpingoeca sp. ATCC 50818]
Length = 8158
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V TD D N + + ++ G RA FS++ +G+V TL LDR+
Sbjct: 6421 RVQVTDADSGVNE-LVSFMLV---GGRADLFSVNPVSGVVTTLQPLDRE----------- 6465
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA E +TV+A D G+PQLS T+ +TV ++NDN P FD+ Y
Sbjct: 6466 ----VQA----------EYALTVLALDQGSPQLSTNATVTVTVGNVNDNAPQFDQAVY 6509
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
++ATD D NG + + + G + ++D TG++ A DR
Sbjct: 3429 LNATDADVGPNG-DVTFAFV---GAQRFLAVDAHTGVITLATAFDR-------------- 3470
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + E TV A+D G P SD T +TV D+NDN P F
Sbjct: 3471 -----------ETQAEHTFTVRAQDAGQPPRSDVATFTVTVGDVNDNSPAF 3510
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
R++ L D E +T++A D G Q L M + V+D+NDN P FD+V Y
Sbjct: 5456 RLRVLKPLDRETRDRYALTIVATDRGVEQQLQTTFDMLVRVQDVNDNAPQFDQVLY 5511
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 30/119 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKA---PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V A D D S +QY ++ A P A F +D TG V LDR
Sbjct: 800 VSAADADNTSPSNLVQYSLVSADSTPSADAAFDVDATTGAVTVTSPLDR----------- 848
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM--FDRV 116
E + V+A D GTP + + + +TV D++DN + DRV
Sbjct: 849 --------------EATAAYTLIVLASDLGTPAQTASLNITVTVGDVDDNAAVAAMDRV 893
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 25/116 (21%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D N +QY + A RA F+ID TG++ T R I + TD
Sbjct: 1346 VTATDADAGDNA-RVQYELDVA--SRALFAIDAATGVITT----------RTSSIDLETD 1392
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + ++V A D G S +++ V D ND P F++ Y
Sbjct: 1393 AQATYM------------LSVTARDGGASSRSSTAHVRVFVTDANDVAPRFEQSTY 1436
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 30/107 (28%)
Query: 12 SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
++G T+ YRI+ + F+ID TG + T LDR
Sbjct: 3994 ADGDTVAYRILTSG---TTFTIDPTTGWLSTNAVLDR----------------------- 4027
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV A D G + T+ + V D+NDN P+F+R +Y
Sbjct: 4028 --EEEDAYALTVSASDPGGRRA--VATVLVRVVDVNDNAPVFERERY 4070
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 24/115 (20%)
Query: 24 APGERAKFSIDKETGIVKTLYALDRDD----PEREKEIYITTD-------------IRVQ 66
A G F++ +E G+ L A++ D P + + I T + +
Sbjct: 2178 ADGTELSFTVQEEAGVRTALTAVNVTDADSAPNAQPTLRIDTAYAQASMFSIVDGVLYIA 2237
Query: 67 ALDRDDPEREKEIYIT-VIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRVQY 118
+ DR+ ++E+Y V+A D GT QLS + T+++ DINDN P F + Y
Sbjct: 2238 STDRE----QREVYAARVVASDVGTTPQQLSTSFTVRVVSTDINDNAPRFAQPAY 2288
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D + + Y I+ F+ID TG+V+T LDR
Sbjct: 2640 ATDADITAGFNRVSYSIVGGNAA-GLFAIDAATGVVRTTGPLDR---------------- 2682
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV A DNG P L+ + + V D+NDN P+F Y
Sbjct: 2683 ---------ETDAAYNLTVQAADNGEPPLTATVAVPVVVGDVNDNAPVFTSNAY 2727
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVK-TLYALDRDDPEREKEIYITT 61
V A+D D +N + Y +I A FS+D TG V+ T LDR+ E
Sbjct: 2745 VAASDADAGANA-RVTYSLINATA--PLFSVDATTGEVRLTGGQLDRETAETHT------ 2795
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
+ V A D+G P QLS T+ +TV D+NDN P+F
Sbjct: 2796 -------------------LVVRARDSGAPVQLSTDATIVLTVLDVNDNAPVF 2829
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
T D+ V ALD E+ + + V D G P S ++ +++ D+NDN P+ VQ
Sbjct: 7018 TGDVYVSALDY---EQMSAMQLRVYVTDKGQPSRSATASIAVSIVDVNDNAPVVSAVQ 7072
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y + + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 672 VSATDPDLGPNG-TVKYSL--SAGDRSRFQVNAQSGVISTKMALDRE----EKTAY---- 720
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 721 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 759
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y +IK ER +F+ID +G V + LD
Sbjct: 1191 LRVSASDVDEGSNG-LIHYSVIKGNEER-QFAIDSNSGQVTLIGTLDY------------ 1236
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1237 -------------EATPAYSLVIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPK 1278
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 564 LVLRATDGDLGDNG-TVRFSLQEAEADQRSFRLDPVSGRLSTISSLDRE----EQAFY-- 616
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 617 -------------------SLLVLATDLGSPPQSSVARINVSLLDVNDNSPVFYPVQY 655
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQ S + + + V D+NDN P+FD++ Y
Sbjct: 925 IEILASDMGVPQRSSSVILTVYVHDVNDNPPVFDQLSY 962
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2060 TIDGEVRLTGELDREEVSTYSLTVVATDKGQPALSSSTEVVVRVLDINDNNPVFAQALY 2118
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I++ + +F ID TG + LDR
Sbjct: 2133 IQVLAADGDEGTNG-QVRYGIVEGNANQ-EFRIDSVTGTITVAKPLDR------------ 2178
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2179 -------------EKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2223
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1085 AIDKDFGPNGEVRYSFEMVQPDFELHAVSGEITNTHQFDRESLMRRRGTAVFSFTVIATD 1144
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1145 QGLPQPLKDQATVHVYMKDINDNAPKF 1171
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A+D D +NG I Y I + TG ++ + ++YI
Sbjct: 977 FQVQASDKDSGANG-EISYTIAEG-----------NTGDAFGIFP--------DGQLYIK 1016
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ LDR E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1017 SE-----LDR---ELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1066
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 231 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 274
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 275 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 313
>gi|194591873|gb|ACF76476.1| protocadherin-15-CD2 isoform 1 [Homo sapiens]
Length = 1783
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 657 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 712
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 713 VVTDVNDNAPVFD 725
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGLNG-TVRYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F + Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LVLGATDGDLGDNG-TVRFSLQEAETDQRSFRLDSVSGRLSTISSLDRE----EQGFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSIARINVSLLDVNDNSPVFYPVQY 694
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y +IK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYYVIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGATSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 1001
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D G+P L+ T+ + V+DINDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLVITATDAGSPALTGTGTINVIVDDINDNVPTFPSKMY 2369
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2174 IQVCATDGDEGTNG-QVRYGIVDGDANQ-EFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 27 ERAKFSIDKETGIVKTL-------YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEI 79
+RA S+ K + + K Y+ + P+ E + DR+ R++
Sbjct: 1113 QRAGSSVGKVSALDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGT 1172
Query: 80 YI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
+ TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1173 AVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVLAMDKDSGPNG-QLDYEIVNGNKEHS-FSINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKISQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2776
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + VIA D LS + I +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLLVIASDRAVEPLSATVNVTIILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
>gi|218505787|ref|NP_001136241.1| protocadherin-15 isoform CD2-1 precursor [Homo sapiens]
Length = 1790
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|432092385|gb|ELK25000.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Myotis davidii]
Length = 1240
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+++ LDR+
Sbjct: 476 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRSVRRLDRE----------- 523
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +Y +T A D G P L ++++TV+D+NDN P+F
Sbjct: 524 ---------------ARPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 562
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 60 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 105
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 106 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 146
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 210 DRESVEHYFFGVEARDHGSPALSSSASVTVTVLDVNDNRPEFTTKEY 256
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 415 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 461
>gi|341877402|gb|EGT33337.1| hypothetical protein CAEBREN_30872 [Caenorhabditis brenneri]
Length = 2606
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID+++G++KT LDR+ R + V A D GT
Sbjct: 534 FIIDEDSGVIKTTKLLDRETVARYS-------------------------LKVTARDMGT 568
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L+ + T+ + ++DINDN P+FD+ +Y
Sbjct: 569 PPLNTSTTITVVLKDINDNAPIFDKKEY 596
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG I+Y + + G ++ +I+ ++G+++T LDR
Sbjct: 285 LSVFARDLDSGENG-EIEYSLGEGNG-KSLLAINSKSGVIQTAAPLDR------------ 330
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + VIA D G P+ + ++ITV D+NDN P+F Y
Sbjct: 331 -------------ETLSLIRLDVIASDKGVPKRESSALVEITVLDVNDNAPVFASDSY 375
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++P ++ I + + A D G P LS A + +T+ D+NDN P F+++ Y
Sbjct: 872 NEPSFDRVIVLPIFARDRGNPSLSAASEITLTLSDVNDNAPAFEQLSY 919
>gi|344277249|ref|XP_003410415.1| PREDICTED: protocadherin-18 [Loxodonta africana]
Length = 1161
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 450 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 496
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 225 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSVLKISIADSNDNSPAFEQQSY 277
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 31 FSIDKETGIVKTLYALDRD----DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
F+ID G +KTL DR+ D E + D R R + +
Sbjct: 1200 FTIDIRNGFIKTLRPFDREALVRDSRGTAEGEVGGDERAS---RISSIEGNYMILEATVS 1256
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG+P+LSD +K+ + D+NDN P+F R Y
Sbjct: 1257 DNGSPRLSDKVKVKVIITDVNDNAPVFLRAPY 1288
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2411 LTVKAYDADSPPLNS---QVRYFLKEGDTDLFRINASSGDISLLKPLDR----------- 2456
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER+ E +T++A D G+P L+ +++ V+D+NDN P+F+ Y
Sbjct: 2457 --------------ERQSEYILTLVAMDTGSPPLTGTGVVRVEVQDMNDNGPVFELQSY 2501
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+VHA D D SNG + Y I+ G++ F +++ TGIV R +
Sbjct: 1625 MRVHARDADSSSNG-LVTYEIVS--GQQELFRLNRNTGIVTFTPGPQYKSKVRYQLTLKA 1681
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I G ++ + + +NEP+
Sbjct: 1682 TDEAVQS-----ERRSSEVYITIITPGFGGSEVPQFAQKNVLSGSVYENEPL 1728
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A+D D P NGG Y+++ ++ S+D+ +G+VK+ + DR EI T
Sbjct: 3675 MTLAASDPDLPRNGGPFSYKLVGGK-HKSWLSVDRSSGLVKSTASFDR-------EITPT 3726
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++ D P ++ + IT+ + + N P S +++TV N + P
Sbjct: 3727 LEAVIEVEDSGKPMQKSKHMITITVLDQNDNP--STTRNLQVTVNLFNGDLP 3776
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1985 RLDYEEVQHYILLVQAQDNGQPSLSTTITIYCNVLDLNDNAPIFDPMSY 2033
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + ++ FSID TG + + +K ++
Sbjct: 3038 QIIATDRDKQGPNSVISYSLQQS---SLMFSIDPATGEIFS-----------KKMVHFRH 3083
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++ E +TV+A DNG P L C + I + D + N P F+R +Y
Sbjct: 3084 SQYVRS-------PENMYALTVLATDNGKPPLYSECLVNINIVDAHKNPPKFERAKY 3133
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 52 EREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
E+ ++I +RV LDR++ + +TV+A D GTP + + I V D+ND+E
Sbjct: 446 EKTGSLHI---VRVNGVLDREEIGKYN---LTVVAMDKGTPARTTTAHLIIDVNDVNDHE 499
Query: 111 PMFDRVQY 118
P+F++ +Y
Sbjct: 500 PVFEKSEY 507
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + ++A D+G P LS ++ + + D+ND+ P+FD Y
Sbjct: 1016 LLVELMATDSGHPALSSRLSLSVNIADVNDHTPVFDHTSY 1055
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I E KFS+D+ TG + LD D T
Sbjct: 3253 LTVGATDADVGPNG-MLRY-AISGGNELRKFSVDERTGGIVIRQPLDFD----------T 3300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T +E ++ + +D G LS + I + D+NDN P+F + +Y
Sbjct: 3301 T---------------QEYHLNITVQDLGFQPLSAVAMLTIILTDVNDNPPVFAQKEY 3343
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID +TGI+ T LDR+ E +Y ++T++A+D+
Sbjct: 2542 RFHIDSQTGIITTSMPLDRE----ETAVY---------------------HLTLMAQDSS 2576
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I V D+NDN P FD +Y
Sbjct: 2577 VTEPRASSVNLTIQVGDVNDNAPSFDASRY 2606
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + + T +P + T+ +
Sbjct: 189 ATDADSGENGVTDQYEIVAG-------NVDNKFRLATT------TNPSGD-----TSYLH 230
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 231 LETKGNLDRESRGSYQLNISARDGGSPPRFGFLQVNVTILDVNDNPPIFDHSDY 284
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 33/114 (28%)
Query: 8 VDPPSNG--GTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
D P +G G + Y I K E + F I+ ETG++ TL +DR
Sbjct: 1518 ADDPDSGLNGKVSYAISKQEPELSGGRHFGINTETGVIYTLRDIDR-------------- 1563
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMF 113
+A+D +TV+A D P QL + + VEDINDN P+F
Sbjct: 1564 ---EAID--------TFRLTVVATDRAQPSDLQLHAEKLVTVIVEDINDNAPVF 1606
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 28/109 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D+ P +N Y II + F ID ++G + T LDR
Sbjct: 3577 DIRPQNN--QFSYSIING-NLKQSFRIDAQSGEITTAAHLDR------------------ 3615
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D G P + + T++I +ED+NDN P F R
Sbjct: 3616 -------EETAHFNLVIGAIDMGLPPQTGSATVRIDLEDVNDNAPTFTR 3657
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 28/114 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG + YR+ R F I +TG + T LDR
Sbjct: 2835 VKATDRDSGDNG-KVSYRL--KDDYRGTFEIASDTGEIHTTMRLDR-------------- 2877
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E E + V A D G PQL+ ++ + + D NDN P F R+
Sbjct: 2878 -----------EELGEYALVVEAVDQGRPQLTGTSSVLLHLLDKNDNPPKFTRL 2920
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D +NG I++ I+ F+I ++TG+V+ L+ + R T
Sbjct: 2303 LQVSATDIDEGANG-RIRFSIVMGDLNH-DFTISEDTGVVRVAKNLNFERLSR-----YT 2355
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ + D ++P SD + I + DINDN P F
Sbjct: 2356 LTVKAEDCDLENPA-------------------SDTAELTIIILDINDNRPTF 2389
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 35/115 (30%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG-ERA---KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
ATD D +NG ++ + + AP ER +F+ID TG + T LDR+ R +
Sbjct: 631 ATDHDQGTNG-SVTFAL--APSVERLYPQQFAIDAITGQLTTRRFLDRESTARYE----- 682
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
I VIA D G TPQ S A T+ + V D+NDN+P F
Sbjct: 683 --------------------IPVIARDQGAPTPQSSTA-TVWLNVADVNDNDPEF 716
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+ A+D D N + I A R F ID TG + LD +D
Sbjct: 1409 MRFRASDADQGVNSQVV--FSISAGNRRDTFHIDTNTGSLYLHKMLDYED---------- 1456
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I AL+ + A D GTP LS + V D NDN P+F
Sbjct: 1457 --ITSYALN-------------ITASDCGTPLLSTTVLYNVVVVDANDNPPIF 1494
>gi|312375493|gb|EFR22855.1| hypothetical protein AND_14083 [Anopheles darlingi]
Length = 1960
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QVHA D D N ++YR + G KFSIDKETG + LDR+ ++ IY
Sbjct: 1339 FQVHAYDEDVGENA-IVRYRFKMDTTGNYKKFSIDKETGEISIASPLDRE----KQMIY- 1392
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D+RV+A D+ P TP LS + + + V D++DN+P F
Sbjct: 1393 --DLRVEAYDQGVP----------------TP-LSSSVDLIVYVRDVHDNQPQF 1427
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 12 SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
S I+YR+++ F + ++G + A+D + E TTD R
Sbjct: 677 SPNSAIEYRLLETH-HSEHFHVGLKSGRLSVREAVDFEQLEGS-----TTDTRA------ 724
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I +TV A D G P+LS + + V+D+ND+ P F QY
Sbjct: 725 -------ISLTVEANDGGEPRLSTQVEVTVYVQDVNDHAPEFLEAQY 764
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T IRV+ D ER +EI +T++A + TP +++ V D NDN P F R Y
Sbjct: 481 TFGIRVKNPALLDYERLREINLTIVASEIDTPARRSVAQIRVKVLDQNDNFPEFGRSIY 539
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ ATDVD S G T R G + +D TGI+ E +++
Sbjct: 554 VQISATDVDSGSYG-TRGIRYTNLTGSISSSLQLDPRTGIITV--------SSNEHQLF- 603
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ Y+TV A+DNG + + + + D+NDN P+F + +Y
Sbjct: 604 ------------DREIIQKHYLTVEAQDNGGRGNRNTVQLILNLLDVNDNAPVFLQKRY 650
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID +G++ LD ER ++
Sbjct: 3312 YYSIVGGNEHKKFQIDARSGVITIAEQLDY-------------------------ERARD 3346
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 3347 YFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSY 3386
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNG 89
S D +TGI + + YA+ D +I + V L R D E + + TVIA D G
Sbjct: 2365 SRDNDTGINQQVRYAIQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDRG 2424
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
P LS + +TV D+NDN P F++ Y
Sbjct: 2425 VPSLSSTAHVWVTVIDMNDNPPKFEQPSY 2453
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + Y I + G+R K FSID++TG + LDR+ E Y+
Sbjct: 3402 QVFANDLDSEENG-NVSYYIER--GDRQKQFSIDQKTGQITVAAPLDRE----EIASYV- 3453
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A D+G P LS + I V D NDN P+F Y
Sbjct: 3454 --------------------LEIHARDSGVPMLSSFVMVNIEVLDANDNPPLFSLSNY 3491
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + +F I ++GIV +LDR+ K +Y
Sbjct: 3193 KVHATDDDIGINR-KIRYEFIDSAD--GQFLIAADSGIVTLGKSLDRE----TKAMY--- 3242
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +QALD+ GTPQL+ ++ + V+DINDN P F
Sbjct: 3243 NVTIQALDQ------------------GTPQLTSVTSLIVNVQDINDNPPEF 3276
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 3088 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTVGQLDR---ESQAKYSLT 3141
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I + D+NDN P F Y
Sbjct: 3142 AHVQ----DRDKPSWEC------------------SSQLEILISDLNDNPPKFTMQTY 3177
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 2880 LKIIAHDDDLGSNG-EVRYSFGTDIGELANVFTVDAYTGWISTLVQLDK----------- 2927
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 2928 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAF 2967
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D + GG ++Y + A F +DK +G ++T+ +LD + E++++
Sbjct: 1009 VDATDPDEGA-GGDVEYFLSDAMESEGFFKVDKVSGTIRTVQSLDFE----ERQVHT--- 1060
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN--EPMFD 114
+TV+A D G P LS + I V D+N+N P+FD
Sbjct: 1061 ------------------LTVVARDRGEPSLSSETMVIIEVVDVNENLHAPVFD 1096
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A D D NG + + + G+R + FSID + G + + LDR
Sbjct: 795 KIWARDRDLDYNGKLV---FVISSGDRDSVFSIDPDKGNLNVVGYLDR------------ 839
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E ++ + D G PQ S + + +TV D+NDN P F++
Sbjct: 840 -------------ERESEYFLNISVYDLGKPQKSASRMLPVTVLDVNDNAPKFEK 881
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +ATD D N + Y ++ E F +D TG++ LDR+ +EIY
Sbjct: 899 WRANATDADTGENA-RVTYSLVT---ETNDFRVDPVTGVLSVFGRLDRE----RQEIY-- 948
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D + TP L +++TV+D+NDN P F Y
Sbjct: 949 -ELRIRARDNG-------------GKGTDTPPLYSDALVRVTVDDVNDNAPTFALSSY 992
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ D++ + +++ +PE I TT + + + D E + E + V D+G P
Sbjct: 1224 AFDRDVSPQQFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVTVRDDGRP 1283
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
LS + I V DIND+ P F++ Y
Sbjct: 1284 SLSSTTRVVIAVADINDHGPEFEQKFY 1310
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D DP I Y I G FSID E G +KT ALD
Sbjct: 1117 VRAKDADPLGGDSRIGYTIRGGDG-IGIFSIDDE-GNIKTKAALDV-------------- 1160
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ ++TV A+D+G LS + + + V D NDN P+
Sbjct: 1161 -----------ESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDENDNTPL 1199
>gi|338722561|ref|XP_001915698.2| PREDICTED: protocadherin-18 isoform 1 [Equus caballus]
Length = 1034
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 324 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 370
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 99 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 151
>gi|301613494|ref|XP_002936245.1| PREDICTED: protocadherin-11 X-linked-like [Xenopus (Silurana)
tropicalis]
Length = 1008
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D +G + + P F++D+ TGI+ + LDR
Sbjct: 485 KISATDAD---SGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDR------------- 528
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ TVIA+DNG P L T+ ++V D NDN P F +Y
Sbjct: 529 ------------EKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEY 573
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 66 QALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q+LDR+ +K+ Y+ I ED G P S +++TV D+NDN P+F
Sbjct: 203 QSLDRE----QKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVF 247
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R K ++ ++ D E +E I ++A D+G P L+ + + I ++D
Sbjct: 399 DHDVPFRLKPVF-DNQFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDE 457
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 458 NDNAPVF 464
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ TD D N + ++ A R F ID TG+++ DR
Sbjct: 590 ITVTDADSGENA-VVTLSLVNA---RDNFIIDPLTGVIRPNITFDR-------------- 631
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ V A D G+PQ S + I VED+NDN+P+F
Sbjct: 632 -----------EQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVF 671
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 30/115 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q+HATD D SN I + AK F+ID TG++ LDR++ K
Sbjct: 268 QLHATDADLGSNA-KIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHK---- 322
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+TV+A D G+ S A T+ I + DINDN P D
Sbjct: 323 ---------------------LTVLASD-GSSTPSRA-TVTINITDINDNIPSID 354
>gi|338722559|ref|XP_003364564.1| PREDICTED: protocadherin-18 isoform 2 [Equus caballus]
Length = 1131
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 421 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 467
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 196 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 248
>gi|301782477|ref|XP_002926654.1| PREDICTED: protocadherin-18-like [Ailuropoda melanoleuca]
gi|281348534|gb|EFB24118.1| hypothetical protein PANDA_016340 [Ailuropoda melanoleuca]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|397501091|ref|XP_003821231.1| PREDICTED: protocadherin-15-like, partial [Pan paniscus]
Length = 1136
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|395504746|ref|XP_003756708.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 814
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E + E+ +T+ A D GTPQ S ++I V DINDN P+F + QY
Sbjct: 216 KALDR---EEQPEVRLTLTAVDGGTPQRSGTVQIRILVVDINDNAPVFTQSQY 265
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + E IT+ D G+P+L + + + D+NDN P+F + Y
Sbjct: 426 ALDR---EYKAEYNITITVMDLGSPRLKSEYNITVLISDVNDNSPVFTQRAY 474
>gi|326673403|ref|XP_003199875.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 820
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ERE E I+V D G P LS+ T+ + + D+NDN P+F++ Y
Sbjct: 401 DRERESEYNISVTCADEGVPSLSNTVTLSLQISDVNDNAPVFEQSSY 447
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ + + + A D G PQLS + ITV D NDN P+F Y
Sbjct: 191 DREKQEHLSLVLTAIDGGDPQLSGTAQIHITVLDANDNAPVFTHKIY 237
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ KE V A+D G+P LS ++KI ++D NDN P
Sbjct: 504 IHAVRSFDYEQIKEFQFRVKAQDGGSPPLSSNASVKILIQDQNDNAP 550
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 27/131 (20%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKET---GIVKTLYALDRDDPEREKEIY 58
Q+H T +D N ++I KA SI + I+ T+ A D D+ K Y
Sbjct: 217 QIHITVLDANDNAPVFTHKIYKA-------SITENAVRGTIITTVTASDLDEGSYGKITY 269
Query: 59 ITTDI---------------RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
T+ V+ + D E+ + I V A D+G L+D+C + + V
Sbjct: 270 AITNSLGNFPMLFEINETNGEVRVIGNVDYEKARHYQIHVQASDDGG--LTDSCKVDVDV 327
Query: 104 EDINDNEPMFD 114
DINDN+P+ +
Sbjct: 328 IDINDNKPLIN 338
>gi|296478736|tpg|DAA20851.1| TPA: protocadherin 18 precursor [Bos taurus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Xenopus (Silurana) tropicalis]
Length = 2766
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 25/89 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+ID ETG V T LD +D + + V A D+G
Sbjct: 670 QFAIDPETGAVTTTMELDYED-------------------------QVSYTLAVTAHDHG 704
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
PQ SD ++I V D+NDN P+F R Y
Sbjct: 705 IPQKSDTTYLEILVIDVNDNPPVFQRASY 733
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V ATD D N I YR+I G R F ID +G+++ L +DR++ +
Sbjct: 227 MTVRATDGDSLGNA-NIAYRLIS--GGREVFEIDPRSGVIRILGPVDREE-------IAS 276
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D+ D G P+ S A T+ IT++D NDN P F +Y
Sbjct: 277 YQLVVEANDQ--------------GHDPG-PRSSTA-TVHITIQDENDNAPQFSEKRY 318
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I Y F+++ +GIV+TL LDR
Sbjct: 748 LQVSATDRDSGLNG-RIFYTFAGGDDGDGDFTVEYTSGIVRTLRQLDR------------ 794
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDR 115
E E +TV A D G P + +TV D+NDN P+F R
Sbjct: 795 -------------ENVVEYRLTVYAVDKGHPLPHRTPAEVLVTVLDVNDNAPVFAR 837
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D G ++Y + R+ FS+D TG+V T LDR
Sbjct: 119 VQLRASDPDE-GESGKLEYSMDALFDSRSASYFSLDSNTGVVTTSGELDR---------- 167
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V D G P + T+ +TV D ND++P F++ +Y
Sbjct: 168 ---------------ETKSTHVFRVTVRDGGIPSRTAMATLTVTVSDTNDHDPNFEQQEY 212
>gi|156121105|ref|NP_001095699.1| protocadherin-18 precursor [Bos taurus]
gi|209573159|sp|A7MB46.1|PCD18_BOVIN RecName: Full=Protocadherin-18; Flags: Precursor
gi|154425589|gb|AAI51334.1| PCDH18 protein [Bos taurus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|297674357|ref|XP_002815196.1| PREDICTED: protocadherin-18 [Pongo abelii]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I Y I G +++F+ID + G++ T+ LDR++P
Sbjct: 2502 IQVRATDEDSGLNG-QITYSFINDLG-KSQFTIDAD-GVISTVEMLDRENP--------- 2549
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K++ +TV+A D G + CT+++ + D NDN P F V+Y
Sbjct: 2550 --------------LNKDMVLTVMALDGG--GRASFCTVRVVLADENDNAPKFRAVEY 2591
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 29/113 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D+D NG I Y I+K G+R+ F ID TG++K LDR E+
Sbjct: 3363 RVSAEDLDSQVNG-RITYSILK--GDRSNHFWIDPVTGLLKVNKKLDR-------ELVSM 3412
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D +G+P +S T+ I + D+NDN P+F
Sbjct: 3413 YTLSVQAFD------------------SGSPAMSTRVTVNIDISDVNDNPPVF 3447
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ D D E K+ YITV A D+G P LS A + I + D+NDN P FD+ Y
Sbjct: 3294 ISVADDLDFEVCKDYYITVEAWDSGNPPLSTATMVVIELMDVNDNAPTFDQDVY 3347
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 26/98 (26%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
GT++Y I G F+ID++TG++ T LD E
Sbjct: 1058 GTLRYSIRGGSG-LGTFTIDEDTGMIYTAGILD-------------------------CE 1091
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
+ ++TV+A D G LS + + I +ED+NDN P+
Sbjct: 1092 TKDSYWLTVVATDRGATPLSASVEVFIEIEDVNDNAPL 1129
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D + Y + PG F + TG++ T
Sbjct: 1462 LRVRATDIDERARLSFSMYASVD-PGSMRLFRVSPGTGVIYTA----------------- 1503
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DR D E + +TV+ +D P D + + VEDINDN P F R Y
Sbjct: 1504 --------DRLDYEARTQHILTVMVKDQEFPFNRDLARIVVAVEDINDNVPFFTRTTY 1553
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D D NG + + I E + F+ID + G++ L LDR+
Sbjct: 729 FQVRARDGDSGFNG-RVLFSISDGNKENS-FNIDMDNGLITVLQPLDREQ---------- 776
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR ++ + D G P +S + + +ED NDN+P F + Y
Sbjct: 777 -------LDR--------YFLNITIYDQGIPTMSSWRLLTVIIEDANDNDPRFYQDNY 819
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N T+ Y ++ + FSID +G+V +LDR+ E +
Sbjct: 3152 RLQATDPDEGLNR-TVVYSLVDS--FNGFFSIDSLSGVVILEKSLDRESQESYR------ 3202
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IR QA DR + + +S + I V D+NDN P+F + Y
Sbjct: 3203 -IRAQATDR-------------VGQQGA---MSSQVDLTILVLDVNDNAPVFQKRDY 3242
>gi|355749573|gb|EHH53972.1| hypothetical protein EGM_14696 [Macaca fascicularis]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D+D +G +QY + + G + FSI+K+TG ++T+ LDR
Sbjct: 1054 MMVAAKDIDKGKDG-EVQYFLREGTG-LSVFSIEKDTGTIRTIGPLDR------------ 1099
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++TV+A D GT LS A + I V D NDN P R Y
Sbjct: 1100 -------------EGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVY 1144
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A+D D N + Y+I+ + KF +ID TG + T ALD
Sbjct: 2299 VQIFASDKDSGRNK-MVSYQILDDGSDTTKFFNIDTSTGQITTAQALDY----------- 2346
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V A D+G P LS + + V DINDN P F ++QY
Sbjct: 2347 --------------EETQQFRMKVRAADHGMPPLSSDALVIVDVTDINDNPPEFSQLQY 2391
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
GTI Y II + KFSID + G + TL LDR++
Sbjct: 2521 GTIDYTIINKLADE-KFSIDNK-GHITTLQKLDREN-----------------------S 2555
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I I V+A+D G CT+KI + D NDN P F +Y
Sbjct: 2556 TERVIAIKVMAKDGGGKVA--FCTVKIILTDENDNPPQFKASEY 2597
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I Y + +A FSID +GI+ LD
Sbjct: 1582 LQVRALDQDQGANA-EIHYSL-QAGNAEGFFSIDPHSGIITVAQKLD------------- 1626
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P +++ + V AED G PQL D+ T+ + + + P F +Y
Sbjct: 1627 ------------PSKQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDQTPPKFPEAEY 1672
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D S+G + Y + G R F+ID ETG + TL LD + E +
Sbjct: 2825 IQVTANDQDTGSDG-QVTYSLEAESGNLRGLFTIDGETGWITTLKELDCETQETYR---- 2879
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
V+A D+G QLS +++TV D NDN P F
Sbjct: 2880 ---------------------FYVVATDHGRKVQLSSQTLVEVTVSDENDNAPQF 2913
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 43 LYALDRDDPEREKEIYITTDIRV-------------QALDRDDPEREKEIYITVIAEDNG 89
L A+D D K +Y+ +D V Q L D ER + + D G
Sbjct: 739 LSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQVLSPLDHERTSFYILNITVYDLG 798
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
TPQ S + + V D NDN P F + Y
Sbjct: 799 TPQKSSWKLLAVNVLDTNDNTPRFPQGAY 827
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I A + F ID +G++ T ++D + +R +
Sbjct: 481 LTVRATDEDEGDNG-FVTYTI--ANQKSVPFVIDPYSGVISTSKSMDYELMQRWYHL--- 534
Query: 61 TDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
RV A D P R E E+Y++++ + ++NDN P+F++
Sbjct: 535 ---RVWASDWGSPXRHETEVYVSLM------------------LSNVNDNAPVFEKAS 571
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D N I Y I++ + F+I ++G + LDR
Sbjct: 3350 LTVSADDLDGTMNN-QITYSIVEG-NPQGHFAIQPKSGQISIAKHLDR------------ 3395
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P Q SD +++ V D+NDN P F ++ Y
Sbjct: 3396 -------------EEISSYSLTVRATDNGHPAQFSDVA-VRVHVSDVNDNPPRFFQLNY 3440
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 27/110 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D D NG ++Y ++ P + KF+I+ TG V ALDR E++
Sbjct: 843 QLKAEDADTDDNG-RVKYSLL-TPTD--KFAINGVTGEVTVTGALDR-------ELWPCY 891
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
++++A RD P+ E++ ++D + +T+ED+NDN+P
Sbjct: 892 ALKIKA--RDQPKTGYELF-----------SITD---LTVTLEDVNDNDP 925
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V +DN P T+K+ VED+NDN P F+ V Y
Sbjct: 2045 VAVEVKDNRKPPRVSQATVKVYVEDVNDNPPQFENVPY 2082
>gi|57997201|emb|CAD38850.2| hypothetical protein [Homo sapiens]
Length = 956
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|431899705|gb|ELK07659.1| Protocadherin-18 [Pteropus alecto]
Length = 1133
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|402870475|ref|XP_003899244.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-18 [Papio anubis]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|390460408|ref|XP_002745399.2| PREDICTED: protocadherin-18 [Callithrix jacchus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|355687610|gb|EHH26194.1| hypothetical protein EGK_16098 [Macaca mulatta]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|291401223|ref|XP_002716989.1| PREDICTED: protocadherin 18, partial [Oryctolagus cuniculus]
Length = 1131
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 421 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 467
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KIT+ D NDN P F++ Y
Sbjct: 196 IVVRELDR---ELKSSYELRLTASDMGVPQRSGSSILKITISDSNDNSPAFEQQSY 248
>gi|440908982|gb|ELR58945.1| Protocadherin-18, partial [Bos grunniens mutus]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|426247049|ref|XP_004017299.1| PREDICTED: protocadherin-18 [Ovis aries]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|354494563|ref|XP_003509406.1| PREDICTED: protocadherin 18 [Cricetulus griseus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRY 470
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKASYELQLTASDMGVPQRSGSSVLKISISDSNDNSPAFEQPSY 251
>gi|344247757|gb|EGW03861.1| Protocadherin 18 [Cricetulus griseus]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVKHFTVQINDINDNPPRFQRSRY 470
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKASYELQLTASDMGVPQRSGSSVLKISISDSNDNSPAFEQPSY 251
>gi|297293388|ref|XP_001086925.2| PREDICTED: protocadherin-18-like [Macaca mulatta]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|403305080|ref|XP_003943102.1| PREDICTED: protocadherin-18 [Saimiri boliviensis boliviensis]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P+F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPVFEQQSY 251
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I+ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGLNG-TVRYSI--SAGDRSRFQINAQSGVISTRIALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + +TV D DN P+F + Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD NG I Y +IK ER +F+ID +G V + LD E T
Sbjct: 1230 LRVSASDVDEGKNG-LIHYSVIKGNEER-QFAIDSTSGQVTLIGKLDY-------EATPT 1280
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ +QA+D +GT L+ CT+ I + D NDN P F +
Sbjct: 1281 YSLVIQAVD------------------SGTISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ ++Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQISDLYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3612
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + FSI+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFSINEKNGNISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVYDVNDNPPVFDQLSY 1001
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
K Y L + ++ + + ++RV Q+LDR E ++ + + A D+G+P L+ T+
Sbjct: 2294 KLSYVLLGGNEDQAFTLSASGELRVTQSLDR---ETKEHFVLVITATDSGSPALTGTGTI 2350
Query: 100 KITVEDINDNEPMFDRVQY 118
+ V+D+NDN P F Y
Sbjct: 2351 NVIVDDVNDNVPTFGSKMY 2369
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3473
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3474 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3512
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + + ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LVLGATDGDLGDNG-TVRFSLQETESDQRLFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQY 694
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVVVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPVFAQALY 2159
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2690 LTVSAVDKDSGPNG-QLDYEIVNGNKENS-FSINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2736 -------------EKVSHYMLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2778
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG ++Y I A E F+I+ TG++ ALD + ++ +
Sbjct: 3113 VSARDRDAAMNG-LVRYSI-SAGNEEGIFAINSSTGVLVLAKALDYELCQKHE------- 3163
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IT+ A D G + C++ I V D+NDN P+F
Sbjct: 3164 ------------------ITIRATDGGWVARTGYCSVTINVIDVNDNSPVF 3196
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1124 AIDKDFGPNGEVRYSFEMVQPDFELHAITGEITSTHQFDRESLMRRRGTAVFTFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 LQVFAADGDEGTNG-QVRYGIVDG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKIATYLLTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPNYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|332231060|ref|XP_003264715.1| PREDICTED: protocadherin-18 [Nomascus leucogenys]
Length = 1135
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|291221758|ref|XP_002730887.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
kowalevskii]
Length = 4161
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 23/117 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D N G I+Y I + F+I+ TG + +DR+ Y
Sbjct: 3257 LQVTATDTDIDENAG-IEYSITDGNNGKLYGVFAIEPTTGYIYANSNIDRE----YNSSY 3311
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
T + +TV+A+DNG+PQL+ ++ITV D+NDN P F++
Sbjct: 3312 CNT----------------KYTMTVMAQDNGSPQLNSTTGVEITVLDVNDNVPKFNQ 3352
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V TD D +N I + + + + F ID +TG++ T D ++
Sbjct: 1878 LTVLVTDADSFTNSD-ITFML-----DTSNFQIDDQTGVITTNMIFDFEE---------- 1921
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E V A D G P L+ + +++TV D NDN P+F Y
Sbjct: 1922 -----------DSERQHEFL--VFAFDAGQPSLTSSALVRVTVLDTNDNAPIFSAGHY 1966
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 27/102 (26%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
+ Y II G KF+I TG + L LDR E E
Sbjct: 1475 LTYSIIDGSG--GKFNIHPNTGDIFVLSKLDR-------------------------ESE 1507
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I + D+G L D T++I + D+NDN P FD Y
Sbjct: 1508 ETYIINITVSDSGVEILQDFATVQIQLLDVNDNTPAFDSNIY 1549
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 21 IIKAPGERAKFSIDKE--TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
I K+ + + + +++E G V T+ A D DD + IY + D V +D+
Sbjct: 3043 IFKSTMQNSAYILEEEPIGGHVLTVIAEDPDDGLNGQVIY-SADTVVFEIDQ-------- 3093
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TV A DN P T+ ++V DINDN P+F +Y
Sbjct: 3094 --TTVFAADNNEPYHVSTATVTVSVTDINDNTPVFTESEY 3131
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
IT DI + D D + K Y TV A D G P L+ + ++++ + D NDN P F
Sbjct: 635 ITGDITTNSTDYDFEDNGKLNYEFTVYANDQGIPALTSSSSVRVQILDSNDNAPQFTESA 694
Query: 118 Y 118
Y
Sbjct: 695 Y 695
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 39 IVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE--------REKEIYITVIAEDNGT 90
+V T+ A+D D E + Y TT++ LD + E K+ TV A DNGT
Sbjct: 3477 LVITVLAVDSDSGENGRITY-TTNVEYFHLDNETGEITIQKELDTSKDFTFTVNASDNGT 3535
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P + + I+V++ N P+FD+ Y
Sbjct: 3536 PVKWNTTEVTISVKETNIYAPVFDQTFY 3563
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 74 EREKEIYIT--VIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+RE Y+ V A D GTP +D ++IT+ D+ND +P+ DRV
Sbjct: 3627 DRETAAYVNLEVTAHDGGTPPKNDTTVVQITIIDVNDEQPVIDRVN 3672
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA D D NG + I G + KF ID +TG EI+
Sbjct: 1776 VHAGDDDIGING---RLTYILTSGGQGKFGIDYKTG-----------------EIF---- 1811
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LD+ D E + V D G L D + I V D+NDN P F R Y
Sbjct: 1812 ----TLDKLDYENTVVYSLNVSVSDGGEHVLQDWVDVTIRVSDVNDNYPAFTRDVY 1863
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 39 IVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
IV +L LD + EI +T + + D+ R E Y V A D G P L+ +
Sbjct: 1262 IVFSLDTLDFAINDTTGEISTSTSLDFE----DEDNRIYEFY--VFATDQGEPALTSSAF 1315
Query: 99 MKITVEDINDNEPMF 113
+KI V DINDN P F
Sbjct: 1316 VKIQVVDINDNAPDF 1330
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D N II + FSI++ TG++ LDR+ + E+ +T
Sbjct: 1672 VMATDLDNGPNA-----SIIYSLDGGVPFSINERTGVITATGLLDRE-ARGDYELTVT-- 1723
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A DRD E ++ T+ +TV DINDN P F + Y
Sbjct: 1724 ----ASDRDGLEGSRDA----------------TATVNVTVNDINDNSPEFLQSSY 1759
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 24/90 (26%)
Query: 30 KFSIDKETGIVKT-LYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
+F ID+ TG++ T +LDR+ K +Y ++RV A DRD
Sbjct: 1379 QFLIDERTGVMTTKTSSLDRE----VKALY---ELRVIAFDRDMT--------------- 1416
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
L+ + + IT+ D+NDN P FD + Y
Sbjct: 1417 -AGSLNTSVPVHITISDVNDNRPSFDGLLY 1445
>gi|312080128|ref|XP_003142468.1| hypothetical protein LOAG_06885 [Loa loa]
gi|307762369|gb|EFO21603.1| hypothetical protein LOAG_06885, partial [Loa loa]
Length = 1164
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D NG I Y + F ID+ TGI+ T+ LDR+ EKE YI
Sbjct: 490 RIFAIDEDNDMNG-RITYTLDGDNNVNETFRIDRTTGIITTISKLDRE----EKEKYI-- 542
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ V AED G P LSD+ + I + DINDN P F+
Sbjct: 543 -------------------LKVKAEDGGEPPLSDSLFITIIIRDINDNAPYFE 576
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D+D N I Y +I+ G F +D+ +G ++ + LDR+ R +
Sbjct: 777 QVAAVDIDEGDNA-IIDYYLIEENGNGDTFKLDRSSGTLRVVSKLDREMIARYE------ 829
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A+D G P LS T+ I + D+ND P F+ +Y
Sbjct: 830 -------------------LTVKAQDRGNPPLSSFSTVSIIIIDVNDYAPQFESSRY 867
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 29/113 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y I+ + FSID E G +K +D
Sbjct: 386 LQIRATDSDSGQNG-KVHYSIVASSVN--GFSIDYENGWIKLYQKVD------------- 429
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R + + V A+D+G P S I + DIND++P F
Sbjct: 430 -------------SRSNPVALLVRAKDSGQPAQSSTINCAIHIIDINDHKPHF 469
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
Y L +D +I+ +T + +Q D E I I V A D G P ++ ++I +
Sbjct: 298 YWLGEEDGAELLQIHSSTGV-IQTAQHLDRELMNIIRIYVYATDKGVPPMTSRALLEINL 356
Query: 104 EDINDNEPMFDR 115
D+NDN P+F++
Sbjct: 357 LDVNDNAPVFEQ 368
>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
Length = 3033
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2403 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2448
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2449 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 2493
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE----IYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1196 FTIDTRNGFIKTLRPFDR-------EALVKVSRNAEAGGEDGSLRGSMAGNYMLLEATVW 1248
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1249 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1280
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1981 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 2029
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TG++ R + +
Sbjct: 1621 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGVITFTPGPQFKQEVRYQLTLKS 1677
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-----TPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I +G PQ + +V +NEP+
Sbjct: 1678 TDEAVQS-----ERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVY---ENEPI 1726
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR E + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 446 VRVNGVLDR---EEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1510 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1561
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1562 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1598
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2295 LQVSATDVDDGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2340
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2341 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2381
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLVTTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + I + D NDN P+FD QY
Sbjct: 2223 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQY 2280
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID E+G + T LDR+ E +Y + T++A+D+
Sbjct: 2534 RFHIDSESGEISTATTLDRE----ETPVY---------------------HFTLMAQDSS 2568
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2569 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 2598
>gi|119625544|gb|EAX05139.1| protocadherin 18, isoform CRA_a [Homo sapiens]
Length = 872
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 204 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 250
>gi|119625545|gb|EAX05140.1| protocadherin 18, isoform CRA_b [Homo sapiens]
Length = 1093
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|119625546|gb|EAX05141.1| protocadherin 18, isoform CRA_c [Homo sapiens]
Length = 1092
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
Length = 3366
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D SNG +QYR+ G + +F +D +G V A
Sbjct: 2093 QLSATDADAGSNGW-LQYRL--DSGAQDRFIVDALSGAVLVGNA---------------- 2133
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR E + VIA D GTP LS T+ + ++D+ND+ P F
Sbjct: 2134 -----TLDR---EERSSYRLVVIATDRGTPSLSGTATLTVVLDDVNDSRPRF 2177
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD+D N + Y + + PG A FS+D +TG++++L L
Sbjct: 2532 ITMKATDLDEGENA-LLTYSL-QGPGADA-FSLDPDTGLIRSLRLL-------------- 2574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
Q+ +R + +TV+A D G P L +++ITV D+NDN P+F R
Sbjct: 2575 -----QSFERFN--------LTVVATDQGRPPLWGTASLQITVIDVNDNRPIFVR 2616
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +N Y I A + F +D+ TG + T R P
Sbjct: 1551 LRVVATDRDIGANAMLSYY--ITAGNQDLTFRMDRMTGEIVT-----RPSPP-------- 1595
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E++++ +TV ED+GTP LS + T+ + + D NDN P F +Y
Sbjct: 1596 -----------DREKQQQYTLTVTVEDDGTPTLSTSTTVWVRIIDENDNAPEFPEEEY 1642
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIV-KTLYALDRDDPEREKEIYI 59
+QV ATD D NG + YRI+ G +FS+D +G++ + ALDR+ R +
Sbjct: 1126 LQVQATDADQGENG-KVLYRILS--GNNGQFSMDSLSGLISRGSVALDRE--TRSSNV-- 1178
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A + D + + V VED+ND P+F + QY
Sbjct: 1179 ---LEVEAYNSDLGSMRSTVRVIVY------------------VEDVNDEFPVFTQSQY 1216
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 29/113 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D SNG + ++SI G +K + + E E+ + D
Sbjct: 1769 VKATDADSGSNG-------------KVEYSI--TAGDLKNEFVIS----SVEGELRVRKD 1809
Query: 63 IRVQALDRDDPEREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
I + +RE Y IT+ A+D GTP L+ + I V DINDN+P+
Sbjct: 1810 IEL--------DRETIAYYNITITAKDLGTPSLNATVVVGILVLDINDNDPIL 1854
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 45 ALDRDDPEREKEIYITTDIRVQ--ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
AL P + + ITT I V LDR E+ + Y+ +IA D G + T+ IT
Sbjct: 932 ALQMGMPRLDFRLNITTGILVSTVVLDR---EQIGQYYLRIIAYDAGQFPRTSTSTLTIT 988
Query: 103 VEDINDNEPMF 113
V D+ND P F
Sbjct: 989 VLDVNDETPTF 999
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 31/116 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D N + YR +P A F ID TG + LDR
Sbjct: 1336 VQVKAQSAD---NLNQLSYRFDPDTSPAALALFKIDSVTGRITVTGLLDR---------- 1382
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
ER +TV+A+D G P+ + IT+ D NDN P FD
Sbjct: 1383 ---------------ERGDSYTLTVVADDGG-PKRGSTVKVSITILDENDNSPEFD 1422
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ TD D N + Y I A + KFS+ TG+V+T+ LDR
Sbjct: 1019 VRLNCTDNDAGLNA-ELSY-FITAGNQDGKFSVGFRTGVVRTVVGLDR------------ 1064
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A DNG + + T+ + V D+NDN P+F + Y
Sbjct: 1065 -------------ETQASYRLVIEAIDNGPAGGRRTGTATVYVEVLDVNDNRPIFLQNSY 1111
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYA-LDRDDPEREKEIYI 59
+ V A D D NG T+ Y I E ++I++ TG ++T A LDR+
Sbjct: 802 ITVFAVDPDYGDNG-TVVYSINP---ENPFYTINRNTGKIRTSGAVLDRE---------- 847
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMF 113
+ D R L R I + A D GTP L S + T+ + + D+NDN+P F
Sbjct: 848 SQDARSAQLMRT---------IIISATDRGTPPLRSSASATVFVNLLDLNDNDPAF 894
>gi|66773382|ref|NP_001019282.1| protocadherin 1 gamma 11 precursor [Danio rerio]
gi|50881502|gb|AAT85331.1| protocadherin cluster 1 gamma 11 [Danio rerio]
Length = 888
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E+E E I+VI D G P LS + ++++ + D+NDN P+F++ +
Sbjct: 400 QELDR---EKEAEYNISVICSDEGVPALSSSVSLRVQISDVNDNAPVFEKSNH 449
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E K+ + V A+D G+P LS T+KITV+D NDN P
Sbjct: 506 ITAVRSFDYETLKDFHFRVKAQDGGSPPLSSNVTVKITVQDQNDNAP 552
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR++ E+ + + + A D G P L+ + +TV D NDN P+F + Y
Sbjct: 192 KALDRENKEK---LSLMLTAVDGGEPSLTSTVRIHVTVLDANDNPPVFSQRVY 241
>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Bombus impatiens]
Length = 4739
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID +G++ LD ER ++
Sbjct: 3312 YYSIVGGNEHKKFQIDARSGVITIAEQLDF-------------------------ERARD 3346
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 3347 YFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSY 3386
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + Y I + G+R K FSID++TG + +LDR
Sbjct: 3402 QVFANDLDSEENG-NVSYYIER--GDRQKQFSIDEKTGQITVAASLDR------------ 3446
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P+LS + I + D NDN P+F Y
Sbjct: 3447 -------------EEIGNYVLEVHARDSGIPRLSSFVMVNIEILDANDNPPLFSLSNY 3491
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 3088 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTVGQLDR---ETQAKYSLT 3141
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I V D+NDN P F Y
Sbjct: 3142 AHVQ----DRDKPSWEC------------------SSQLEILVSDLNDNAPKFTMQTY 3177
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 2880 LKIIAHDEDLGSNG-EVRYSFGSDIGELANVFTVDTYTGWISTLVLLDK----------- 2927
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 2928 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAF 2967
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
YA+ D +I + V L R D E + + TVIA D G P LS + +T
Sbjct: 2377 YAIQNDTENSTDLFHIDPEEGVIFLKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVT 2436
Query: 103 VEDINDNEPMFDRVQY 118
V D+NDN P F++ Y
Sbjct: 2437 VIDMNDNPPKFEQPSY 2452
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 28/112 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D S GG I+Y + A F +DK +G ++T +LD + E++++
Sbjct: 1010 ATDPDEAS-GGDIEYFLSDAMESEGYFKVDKMSGTIRTTQSLDFE----ERQVHT----- 1059
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN--EPMFD 114
+T++A+D G P LS + I + D+N+N P+FD
Sbjct: 1060 ----------------LTIVAKDRGEPSLSSETMVIIEMVDVNENLHAPVFD 1095
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D NG + + G+R + F ID +TG + + LDR
Sbjct: 793 VKIRARDRDLDYNGKLV---FCISSGDRDSVFGIDPDTGDLNVIGYLDR----------- 838
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E ++ + D G PQ S + + +T+ D+NDN P F++
Sbjct: 839 --------------ERESEYFLNISVYDLGKPQKSASKMLPVTILDVNDNAPKFEK 880
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F + ++GIV LDR+ K +Y
Sbjct: 3193 KVHATDNDIGINR-KIRYEFIDSAD--GHFLVAADSGIVTLGKPLDRE----TKAMY--- 3242
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ +QA+D+ GTPQL ++ + V+DINDN P F
Sbjct: 3243 NVTIQAVDQ------------------GTPQLMSVTSLIVNVQDINDNPPEF 3276
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ D++ + +++ +PE I TT + + + D E + E + V D+G P
Sbjct: 1223 AFDRDVSPQQFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVTVRDDGRP 1282
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
LS + I V DIND+ P F++ Y
Sbjct: 1283 SLSSTTRVVIAVADINDHGPEFEQKFY 1309
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +ATD D N + Y ++ E F +D TG++ LDR+ +EIY
Sbjct: 898 WRANATDADLGENA-RVTYSLVT---ETNDFRVDPVTGVLTVFGRLDRE----RQEIY-- 947
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D + +P L +++TV+D+NDN P F Y
Sbjct: 948 -ELRIRAQDNG-------------GKGTDSPPLYSDALVRVTVDDVNDNAPSFALSTY 991
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 27/110 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D DP I Y I G FSID E G +KT LD
Sbjct: 1116 VRAKDADPLGGDSRIGYTIRGGDG-IGIFSIDNE-GNIKTKVMLDV-------------- 1159
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ ++TV A+D+G LS + + + V D NDN P+
Sbjct: 1160 -----------ESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDRNDNTPL 1198
>gi|195328957|ref|XP_002031178.1| GM24175 [Drosophila sechellia]
gi|194120121|gb|EDW42164.1| GM24175 [Drosophila sechellia]
Length = 1077
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD----------RD 49
+Q+ A D D + + Y I++ R+ F+ID ++G+++ +++ D R
Sbjct: 444 LQLEARDADLNGTENSQVTYEIVEGL-YRSNFTIDPQSGLLRPVHSFDFEELVDRSSRRS 502
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
DP+ I +EI + V A D+G P LS + I V+D+NDN
Sbjct: 503 DPQTGGSFSI-----------------REIDLLVRARDSGIPMLSTVVPVLIYVQDVNDN 545
Query: 110 EPMFDRVQY 118
P+F R Y
Sbjct: 546 APIFQRSFY 554
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + + YRI G KF I+ ETG++ +
Sbjct: 569 LQVTAIDRDGSAPNNVVVYRI--QTGASDKFIINSETGVISVAQGAN------------- 613
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
LD D + ++ +Y ++VIA D G QL CT+ I+++D+N+ P+
Sbjct: 614 -------LDPDLTDSKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL 662
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+DVD TI Y + P R+ +D +TG EI +
Sbjct: 803 VNVLASDVD---KNRTITYALEGNPTYRSLMHLDPQTG-----------------EIVVA 842
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I D E+ + + +V A D+G P S + ITV D NDN P F
Sbjct: 843 SKI--------DHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYF 887
>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
terrestris]
Length = 3597
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 25/100 (25%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
Y I E KF ID +G++ LD ER ++
Sbjct: 2170 YYSIVGGNEHKKFQIDARSGVITIAEQLDF-------------------------ERARD 2204
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++T+ A D G P LS+ T+ ITV D NDN P+F V Y
Sbjct: 2205 YFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSY 2244
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + Y I + G+R K FSID++TG + LDR
Sbjct: 2260 QVFANDLDSEENG-NVSYYIER--GDRQKQFSIDEKTGQITVAAPLDR------------ 2304
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D+G P+LS + I + D NDN P+F Y
Sbjct: 2305 -------------EEIGNYVLEVHARDSGIPRLSSFVMVNIEILDANDNPPLFSLSNY 2349
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N + R KFS+DKETG++KT+ LDR E + + +T
Sbjct: 1946 LTVLATDYDDEPNA---KLRFYLTGDNNDKFSLDKETGVLKTVGQLDR---ETQAKYSLT 1999
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ DRD P E + ++I V D+NDN P F Y
Sbjct: 2000 AHVQ----DRDKPSWEC------------------SSQLEILVSDLNDNAPKFTMQTY 2035
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++ A D D SNG ++Y GE A F++D TG + TL LD+
Sbjct: 1738 LKIIAHDEDLGSNG-EVRYSFGSDIGELANVFTVDTYTGWISTLVLLDK----------- 1785
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ E V+A DNG P+ ++ + ++D NDN P F
Sbjct: 1786 --------------EKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAF 1825
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRD-DPEREKEIYITVIAEDNGTPQLSDACTMKIT 102
YA+ D +I + V L R D E + + TVIA D G P LS + +T
Sbjct: 1235 YAIQNDTENSTDLFHIDPEEGVIFLKRSLDHETHESHHFTVIAIDRGVPSLSSTAHVWVT 1294
Query: 103 VEDINDNEPMFDRVQY 118
V D+NDN P F++ Y
Sbjct: 1295 VIDMNDNPPKFEQPSY 1310
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N I+Y I + F I ++GIV LDR+ K +Y
Sbjct: 2051 KVHATDNDIGINR-KIRYEFIDS--ADGHFLIAADSGIVTLGKPLDRE----TKAMY--- 2100
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ +QA+D+ GTPQL ++ + V+DINDN P F Y
Sbjct: 2101 NVTIQAVDQ------------------GTPQLMSVTSLIVNVQDINDNPPEFASKVY 2139
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTP 91
+ D++ + +++ +PE I TT + + + D E + E + V D+G P
Sbjct: 81 AFDRDVSPQQFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVTVRDDGRP 140
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
LS + I V DIND+ P F++ Y
Sbjct: 141 SLSSTTRVVIAVADINDHGPEFEQKFY 167
>gi|195570866|ref|XP_002103425.1| GD18969 [Drosophila simulans]
gi|194199352|gb|EDX12928.1| GD18969 [Drosophila simulans]
Length = 1435
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 29/129 (22%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD----------RD 49
+Q+ A D D + + Y I++ R+ F+ID ++G+++ +++ D R
Sbjct: 642 LQLEARDADLNGTENSQVTYEIVEGL-YRSNFTIDPQSGLLRPVHSFDFEELVDRSSRRS 700
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
DP+ I +EI + V A D+G P LS + I V+D+NDN
Sbjct: 701 DPQTGGSFSI-----------------REIDLLVRARDSGIPMLSTVVPVLIYVQDVNDN 743
Query: 110 EPMFDRVQY 118
P+F R Y
Sbjct: 744 APIFQRSFY 752
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D + + YRI G KF I+ ETG++ +
Sbjct: 767 LQVTAIDRDGSAPNNVVVYRI--QTGASDKFIINSETGVISVAQGAN------------- 811
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
LD D + ++ +Y ++VIA D G QL CT+ I+++D+N+ P+
Sbjct: 812 -------LDPDLTDSKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL 860
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+DVD TI Y + P R+ +D +TG EI +
Sbjct: 1001 VNVLASDVDKNR---TITYALEGNPTYRSLMHLDPQTG-----------------EIVVA 1040
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I D E+ + + +V A D+G P S + ITV D NDN P F
Sbjct: 1041 SKI--------DHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYF 1085
>gi|393911283|gb|EJD76245.1| CBR-HMR-1 protein [Loa loa]
Length = 2534
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 25/140 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGI-VKTLYALDRDDPER-----E 54
+QV+ D++ NG + A E + I K+ G+ V T+ A D DDP E
Sbjct: 1102 VQVNLRDIN--DNGPIFANNLFGAVDETVIWRIIKDEGVFVMTVTATDYDDPRTDNARLE 1159
Query: 55 KEIYITTDI----------------RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
I + +I ++ LDR+ P EK+ I V A D GTP L
Sbjct: 1160 YSIVVNKEIDGEPVFRIVPSNGKIYAMRKLDRELPS-EKQFVIEVRAIDKGTPSLEGTGN 1218
Query: 99 MKITVEDINDNEPMFDRVQY 118
+ I V D+NDNEP F++ Y
Sbjct: 1219 VTIRVMDVNDNEPYFEKTLY 1238
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D P NG + R F I+ ETG
Sbjct: 453 LKVMATDEDSPPNGEIVYSLYYSQSESRKPFIINSETG---------------------- 490
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R R D E+ + +TV A D G L C + V D+NDN P FDR Y
Sbjct: 491 -ELRPSPFVRFDREQRAQEEVTVKATDKGERPLIGFCQFTVQVLDVNDNPPQFDRTFY 547
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 3 VHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPERE----KE 56
V A D D P ++Y+II G F ID+ TG + L DR+ R K
Sbjct: 803 VKAEDADSPGPQSEVRYQIISDGDSGAARLFRIDELTGGIYPLEIFDREKMIRSFLMLKR 862
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ ++ + AL RD R K Y SD ++I V DINDN P F++
Sbjct: 863 MIVSHQV-CPAL-RD---RIKFFYFLFT---------SDIVKVQIFVADINDNAPYFEQS 908
Query: 117 QY 118
+Y
Sbjct: 909 RY 910
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 33 IDKETGIVKTLYALDRDDP--EREKEIYITTDIR------VQALDRDDPEREKEIYITVI 84
IDK K LY L D E E Y T D ++ALD DD + K + VI
Sbjct: 120 IDKRRSKGKLLYQLYLDTTLVEHESSPYFTIDAEHGLVQLIKALDYDDNTQPKHHQLAVI 179
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A ++ + + ++D+NDN P+F + Y
Sbjct: 180 AREDSK---ESKVPLDVYIKDVNDNAPIFTQPIY 210
>gi|297261317|ref|XP_001111116.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Macaca
mulatta]
Length = 3002
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 842 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 901
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 902 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 935
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 380 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 429
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 430 ---------------VKDTNDHSPVFEQSEY 445
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 955 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 1006
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 1007 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1044
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 460 LTIRASDRDSPVNA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 504
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 505 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 551
>gi|148703243|gb|EDL35190.1| protocadherin 18, isoform CRA_b [Mus musculus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 470
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|170172572|ref|NP_569715.3| protocadherin 18 precursor [Mus musculus]
gi|209573226|sp|Q8VHR0.2|PCD18_MOUSE RecName: Full=Protocadherin 18; Flags: Precursor
gi|26331494|dbj|BAC29477.1| unnamed protein product [Mus musculus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 470
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|17864896|gb|AAL47095.1|AF416735_1 protocadherin 18 precursor [Mus musculus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 470
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|30354448|gb|AAH52198.1| Protocadherin 18 [Mus musculus]
Length = 1134
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 470
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 1782
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F + ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TVKYSI--SAGDRSRFQVSAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q S+ + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSSNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 605 VGATDGDLGDNG-TVRFSLQEAEIDQRSFRLDPVSGRLSTVSSLDRE----EQAFY---- 655
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 -----------------SLLVLAADLGSPPQSSVARVNVSLLDLNDNSPVFYPVQY 694
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I+Y ++K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDEGSNG-LIRYSVMKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATAAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 MEILASDMGVPQLSSSLILTVHVHDVNDNPPVFDQLSY 1001
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E LDR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAVSGEITNTHHLDRESLMRRRGTAVFSFTVIATDRGLPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQALDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|158257468|dbj|BAF84707.1| unnamed protein product [Homo sapiens]
gi|219519457|gb|AAI43362.1| PCDH18 protein [Homo sapiens]
gi|410353781|gb|JAA43494.1| protocadherin 18 [Pan troglodytes]
Length = 1134
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|10047189|dbj|BAB13388.1| KIAA1562 protein [Homo sapiens]
Length = 1136
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 425 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 471
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 200 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 252
>gi|444728753|gb|ELW69196.1| Protocadherin-18 [Tupaia chinensis]
Length = 1161
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 421 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 467
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + T+KI++ D NDN P F++ Y
Sbjct: 196 IVVRELDR---ELKSSYELQLTASDMGVPQKSGSSTLKISISDSNDNSPAFEQQSY 248
>gi|426394875|ref|XP_004063710.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Gorilla
gorilla gorilla]
Length = 3010
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 800 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGIMYTMMELDYENQVAY 859
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 860 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 893
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 294 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 343
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 344 ---------------VKDTNDHSPVFEQSEY 359
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 913 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 964
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 965 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1002
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 374 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 418
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 419 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 465
>gi|268575352|ref|XP_002642655.1| C. briggsae CBR-CDH-3 protein [Caenorhabditis briggsae]
Length = 3207
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 31/118 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++HATD DP NG + YRI+ E ++ F +D TG ++ L LD
Sbjct: 639 KLHATDADPGING-VVSYRIL----ENSRIFHVDSTTGKLRILKNLD------------- 680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ I A+D+G+ Q C+ +I VED+NDN P F Y
Sbjct: 681 ------------AETQRNYTIFYEAKDSGSSQRITNCSAQIIVEDVNDNAPKFTSSFY 726
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 65 VQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V LDR+ ++ Y + + A D G P+LS +C + I + DINDN P F
Sbjct: 157 VGTLDRE----MRDFYSMRLTASDEGVPELSASCLLNIRILDINDNPPDF 202
>gi|426345481|ref|XP_004040438.1| PREDICTED: protocadherin-18 [Gorilla gorilla gorilla]
Length = 1135
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|14589929|ref|NP_061908.1| protocadherin-18 precursor [Homo sapiens]
gi|114596064|ref|XP_001136066.1| PREDICTED: protocadherin-18 isoform 2 [Pan troglodytes]
gi|397499991|ref|XP_003820712.1| PREDICTED: protocadherin-18 [Pan paniscus]
gi|212276496|sp|Q9HCL0.3|PCD18_HUMAN RecName: Full=Protocadherin-18; Flags: Precursor
gi|62739985|gb|AAH93815.1| Protocadherin 18 [Homo sapiens]
gi|168270600|dbj|BAG10093.1| protocadherin-18 precursor [synthetic construct]
gi|410209038|gb|JAA01738.1| protocadherin 18 [Pan troglodytes]
gi|410258400|gb|JAA17167.1| protocadherin 18 [Pan troglodytes]
gi|410295086|gb|JAA26143.1| protocadherin 18 [Pan troglodytes]
Length = 1135
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>gi|193785246|dbj|BAG54399.1| unnamed protein product [Homo sapiens]
Length = 725
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|50510993|dbj|BAD32482.1| mKIAA1562 protein [Mus musculus]
Length = 1135
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 425 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 471
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 200 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 252
>gi|432104659|gb|ELK31271.1| Cadherin-6 [Myotis davidii]
Length = 790
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 29/121 (23%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKT-LYALDRDDPEREKEI 57
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT L+ +DR++ E+ +
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKTALFNMDRENKEQYQ-- 233
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+ +QA D +A G LS T+ IT+ D+NDN P F +
Sbjct: 234 -----VVIQAKD--------------MAGQMG--GLSGTTTVNITLTDVNDNPPRFPQST 272
Query: 118 Y 118
Y
Sbjct: 273 Y 273
>gi|7656967|ref|NP_055061.1| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Homo
sapiens]
gi|22095551|sp|Q9NYQ6.1|CELR1_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1;
AltName: Full=Cadherin family member 9; AltName:
Full=Flamingo homolog 2; Short=hFmi2; Flags: Precursor
gi|7407148|gb|AAF61930.1|AF231024_1 protocadherin Flamingo 2 [Homo sapiens]
Length = 3014
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 799 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 859 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 892
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 293 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 342
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 343 ---------------VKDTNDHSPVFEQSEY 358
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 912 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 964 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1001
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 373 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 417
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 418 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
>gi|410928684|ref|XP_003977730.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2917
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I+ G + F ID +TG + T + DR
Sbjct: 817 LRVQAHDADMGVNG-QVKYGIMHRDGISSGFDIDPDTGYITTTVSFDR------------ 863
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ++V A D L C + I + D NDN P F+ +Y
Sbjct: 864 -------------ERQREFTLSVTATDQADEPLIGICQITIVIADQNDNGPKFENSRY 908
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKA-PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D +G + Y I++ G+ F ID +G++ T + DR+ +K Y+
Sbjct: 1129 QVSAADLDSGLHG-MVHYLILRDDSGDSQFFDIDSLSGVIVTRASFDRE----QKASYL- 1182
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ VQ++D + R + G P +D ++I V D+NDN P F + Y
Sbjct: 1183 --MEVQSMDGSESARPGQ---------QGQPN-TDTAYVRIFVTDVNDNAPAFAQPLY 1228
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 22/107 (20%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HA D D +NG R++ + F++ Y
Sbjct: 1776 LHAIDRDTSANGAPFSIRLLMLTSDATNFNLTD----------------------YGNGS 1813
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V AL D ER+K+ ++ V+ D+G+P S T+ + + D ND+
Sbjct: 1814 AAVTALRTFDRERQKQYFLPVLMTDSGSPPASSTSTLTVIIGDRNDH 1860
Score = 34.7 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D ++ ++Y + G +F+ID+ TG
Sbjct: 1334 VSATDPDQEADQTALRY-FLHGQGAGGEFTIDEHTG------------------------ 1368
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R+ A R D E V+A D G L+ + + V D+NDN P F
Sbjct: 1369 -RIYAHRRLDREERPAWRFLVLATDEGGTGLTGFADVLLEVRDVNDNAPFF 1418
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D+D +G +QY + + G + FSI+K+TG ++T+ LDR
Sbjct: 1054 MMVTAKDIDKGKDG-EVQYFLREGTG-LSVFSIEKDTGTIRTIGPLDR------------ 1099
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++TV+A D GT LS A + I V D NDN P R Y
Sbjct: 1100 -------------EGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVY 1144
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A+D D N + Y+I+ + KF +ID TG + T ALD
Sbjct: 2299 VQIIASDKDSGRNK-VVSYQILDDGSDATKFFNIDASTGQITTAQALDY----------- 2346
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ + V A D+GTP LS + + V DINDN P F ++QY
Sbjct: 2347 --------------EKTQQFRMKVRAADHGTPPLSSDALVIVNVTDINDNPPEFSQLQY 2391
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I Y + GE FSID +GI+ LD
Sbjct: 1582 VQVRALDQDQGANA-EIHYSLQAGNGE-GFFSIDPHSGIITVAQKLD------------- 1626
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P +++ + V AED G PQL D+ T+ I + + P F +Y
Sbjct: 1627 ------------PSKQERFTLIVKAEDQGFPQLKDSATVHIRIRPSDQTPPKFPEAEY 1672
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
GTI Y II + KFSID + G + TL LDR++
Sbjct: 2521 GTIDYTIINKLADE-KFSIDNK-GHITTLQKLDREN-----------------------S 2555
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I I V+A+D G CT+KI + D NDN P F +Y
Sbjct: 2556 TERVIAIKVMAKDGGGKVA--FCTVKIILTDENDNPPQFKASEY 2597
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D S+G + Y + G+ R F+ID ETG + TL LD + E +
Sbjct: 2825 IQVTANDQDTGSDG-QVTYSLEAESGKLRGLFTIDGETGWITTLKELDCETQETYR---- 2879
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
V+A D+G QLS +++TV D NDN P F
Sbjct: 2880 ---------------------FYVVATDHGRKVQLSSQTLVEVTVSDENDNAPQF 2913
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I A + F ID +GI+ T +LD + +R +
Sbjct: 481 LTVRATDEDEGDNG-FVTYTI--ANQKSVPFVIDPYSGIISTSKSLDYELMQRWYHL--- 534
Query: 61 TDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
RV A D P R E E+Y++++ + ++NDN P+F++
Sbjct: 535 ---RVWASDWGSPFRHETEVYVSLM------------------LSNVNDNAPVFEKAS 571
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 43 LYALDRDDPEREKEIYITTDIRV-------------QALDRDDPEREKEIYITVIAEDNG 89
L A+D D K +Y+ +D V Q L D ER + + D G
Sbjct: 739 LSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQILSPLDHERTSFYILNITVYDLG 798
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
TPQ S + + V D NDN P F + Y
Sbjct: 799 TPQKSSWKLLAVNVLDTNDNTPRFPQGAY 827
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D N I Y I++ F+I ++G + LDR
Sbjct: 3350 LTVSADDLDGAMNN-QITYSIVEG-NPLGHFAIQPKSGQISIAKHLDR------------ 3395
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG P Q SD +++ V D+NDN P F ++ Y
Sbjct: 3396 -------------EEISSYSLTVRATDNGHPAQFSDVA-VRVHVSDVNDNPPRFFQLNY 3440
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V +DN P T+K+ VED+NDN P F+ V Y
Sbjct: 2045 VAVEVKDNRKPPRVSQATVKVYVEDVNDNPPQFENVPY 2082
>gi|291384089|ref|XP_002708683.1| PREDICTED: FAT tumor suppressor homolog 3 [Oryctolagus cuniculus]
Length = 4559
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + LD
Sbjct: 3256 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVSEVLDY------------ 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3302 -------------EVCKRFYLVVEAKDGGTPALSAAATVSINLTDVNDNAPQFSQDVY 3346
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG I + I+ G+R ++F++D G+VK LDR
Sbjct: 3365 AEDVDSQPNG-QIHFSIVS--GDRDSEFAVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGFPAMSSTATVNIDISDVNDNSPVFTPANY 3451
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV +TD D +N + Y+I++ F ID +G++ T LD
Sbjct: 2307 LQVVSTDADSENNK-MVHYQIVQDTYNSTDYFHIDSASGLILTARMLDH----------- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS + I + DINDN P+F+++ Y
Sbjct: 2355 --------------ELVQHCTLKVRATDNGFPSLSSEVLVHIHISDINDNPPVFNQLIY 2399
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ +R F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESTAKRF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETISHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ LDR
Sbjct: 1063 LQVTAQDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNNPVFLQDSY 836
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDN 88
++D + GI K +Y+L D I T+ I + Q LDR E++ I+V A D
Sbjct: 3155 AVDPDVGINRKVVYSL-ADSANGFFSIDGTSGIIILEQPLDR---EQQSSYNISVRATDQ 3210
Query: 89 GTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS T+ ITV DINDN P+F+R Y
Sbjct: 3211 SPGQSLSSLATVTITVLDINDNPPVFERRDY 3241
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID G V T LDR++P
Sbjct: 2516 IHVRATDGDPGTYG-QISYTIINDFA-KDRFLIDSN-GQVMTTERLDRENP--------- 2563
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2564 --------------LEGDVSIFLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2605
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGI+ LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTQQFAINSSTGIIYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+K+ ++D+ND P F
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPTF 936
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D +NG + E+ F+ID TG + TL LD
Sbjct: 2835 QVRAMDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + +V+A D G LS + + V DINDN P+F Y
Sbjct: 2884 --------------ETDPMFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVFAHEVY 2929
>gi|119593835|gb|EAW73429.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_b [Homo sapiens]
Length = 3019
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 799 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 859 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 892
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 293 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 342
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 343 ---------------VKDTNDHSPVFEQSEY 358
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 912 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 964 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1001
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 373 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 417
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 418 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
>gi|119593834|gb|EAW73428.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_a [Homo sapiens]
Length = 3014
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 799 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 859 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 892
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 293 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 342
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 343 ---------------VKDTNDHSPVFEQSEY 358
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 912 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 964 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1001
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 373 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 417
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 418 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
>gi|332259108|ref|XP_003278631.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Nomascus leucogenys]
Length = 2923
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 694 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 753
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 754 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 787
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 188 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 237
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 238 ---------------VKDTNDHSPVFEQSEY 253
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 807 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 858
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 859 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 896
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 268 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 312
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 313 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 359
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G F I+ TG + L +LDR
Sbjct: 2444 LTVKAYDADTPPLNS---QVRYFLKEGNADLFRINASTGEIVLLRSLDR----------- 2489
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +T++A D G+P LS+ + + V+DINDN P+F+ +QY
Sbjct: 2490 --------------ELQSEYILTLVAMDTGSPPLSNTGVVSVEVQDINDNGPVFE-LQY 2533
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD------DPEREKEIYITVI 84
F ID G ++TL DR+ R TD +D + + + I
Sbjct: 1213 FKIDTHNGFIRTLRPFDREALVRRPR---GTDNSAGVVDEERNMSSGGGGGSNYLLLEAI 1269
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P L D +KI V D+NDNEP F R Y
Sbjct: 1270 VTDNGIPPLHDKVKVKIIVTDVNDNEPEFLRAPY 1303
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 29 AKFSIDKETGIVKTLY---ALDRD-------------DPEREKEIYITTD-IRVQALDRD 71
A S+ + T + + +Y A DRD +P+++ I T I +Q R
Sbjct: 964 AAISLPENTAVGQEIYLSRARDRDAGVNSRISYNFTYNPDQQFRINSATGVIYLQKPIRA 1023
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP +Y+ ++A D G+P LS ++ + + D+ND+ P+FD Y
Sbjct: 1024 DPG--SVLYVEIMATDGGSPPLSSRLSLPVQIADVNDHTPVFDHTSY 1068
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + + I ER F++++ TG + + LD D
Sbjct: 3288 LTVSATDKDNGPNG--MLHYAISGGNERRDFNVNERTGAITIMQPLDYD----------- 3334
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + ED G LS + I + D+NDN P+F++ +Y
Sbjct: 3335 --------------LMQEYHLNITVEDLGYKPLSAVAMLSIILTDVNDNPPIFNQSEY 3378
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD 49
M + A+D D P NGG YRI+ ++ SIDK TG+V ++ + DR+
Sbjct: 3710 MTLAASDPDLPENGGPFSYRIVGGK-HKSLLSIDKYTGLVSSMASYDRE 3757
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + ++P FS+D TG EI+ T
Sbjct: 3072 QIIATDRDKQGPNSVISYSL-QSPS--PIFSVDPATG-----------------EIFSKT 3111
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ + + E +T++A DNG P L C + I + D N+N P F++++Y
Sbjct: 3112 QIQYKH-SQYISSPENMFALTILATDNGKPPLYTECLVNINIVDANNNPPKFEQMEY 3167
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 76 EKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + YI ++ A+DNG P L+ T+ V D+NDN P+FD + Y
Sbjct: 2022 EVQHYILIVQAQDNGQPSLTTTITVYCNVLDLNDNTPLFDPMSY 2065
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP+ + I V D+ND+EP+F++ +Y
Sbjct: 465 VRVNGVLDREEISKYN---LTVVAIDKGTPERKAIAHLIINVNDVNDHEPVFEKSEY 518
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD ++ D D E + + A D G P LS +KI + D NDN P+FD QY
Sbjct: 2264 TDGILRVADALDRELRLNYVLNITARDRGDPSLSTQSQLKIKILDENDNIPVFDPKQY 2321
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T Y I+ ++D + +V T +P + T+ +
Sbjct: 192 ATDADIGDNGVTDHYEIVAG-------NLDNKFRLVTT------TNPSGD-----TSYLH 233
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 234 LETTGNLDRESRGSYQLNISASDGGSPPRLGFLQVNVTILDVNDNPPIFDHSDY 287
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 34 DKETGI-VKTLYALDRDDPE----REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
D ++G+ K Y + R +PE R I T + + L D E +TV+A D
Sbjct: 1535 DPDSGLNGKVTYVISRQEPELQGGRHFGINTLTGV-IYTLREIDRESIDNFRLTVVATDQ 1593
Query: 89 GTP---QLSDACTMKITVEDINDNEPMF 113
P QLS + + VED+NDN P+F
Sbjct: 1594 AQPAERQLSTEKLVTVIVEDVNDNAPIF 1621
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D N Y A E +F++D ETG++ T L+ P++ T
Sbjct: 302 LQVMASDNDLGDNSKLTYYL---AETEH-QFTVDPETGVISTTERLNC--PQQ-----TT 350
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + L R +K TV A D+G+P+ + + + D ND++P+ R QY
Sbjct: 351 SLLTREPLSRG--HIQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPII-RFQY 405
>gi|443732010|gb|ELU16902.1| hypothetical protein CAPTEDRAFT_195133 [Capitella teleta]
Length = 952
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D N I Y++ + AKF ID TGIVK LDR
Sbjct: 483 VKMNATDADLGRNA-QITYKLDHK--DLAKFEIDSVTGIVKARETLDR------------ 527
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +TV A DNG P QLS + ++++ + D+ND +P F Y
Sbjct: 528 -------------EEKGEYLLTVTAVDNGHPDQLSSSTSLRVWILDVNDEKPQFTSSVY 573
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+R+ + D E E ++ +IA D G+ S ++ I VED NDN P+F++ Y
Sbjct: 194 DVRIVLTETLDREAIPEFHLEIIAYDGGSSPRSGTASIVILVEDANDNVPVFEQTSY 250
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 27/84 (32%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDNG 89
F ++++TG V T LDR+ E +IY + +A D
Sbjct: 617 FEVNRDTGEVTTTRRLDRE--------------------------EHKIYELIAVARDTN 650
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
P LS T+ I V D+NDN P F
Sbjct: 651 GPVLSSTATLSIHVMDLNDNPPQF 674
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 14 GGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
G + + I+K P G +F+ E + L + PE E ++ T+I+ LDR
Sbjct: 375 GTFVAHVIVKDPDAGLNGQFNCSLE----DNAFQLKQTYPE---EFHVVTEIK---LDR- 423
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + D GT + ++ I V+D+NDN P+F Y
Sbjct: 424 --ESRAEYSLVIKCTDRGTNPKTTQKSLTIAVDDVNDNPPVFSANMY 468
>gi|260837396|ref|XP_002613690.1| hypothetical protein BRAFLDRAFT_131618 [Branchiostoma floridae]
gi|229299078|gb|EEN69699.1| hypothetical protein BRAFLDRAFT_131618 [Branchiostoma floridae]
Length = 2244
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 1 MQVHATDVDPPSNGGTIQ-YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
M VHATD D I+ Y + + F I + +G++ + A+D +D I
Sbjct: 760 MFVHATDYDGSELNNRIESYTLSNTTNFASHFGIGQTSGLLSIIQAVDYED-------VI 812
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + EI++ V A+D+GTP LS + + + D+NDN P+F+ +Y
Sbjct: 813 FTNGK------------PEIHLEVTAKDSGTPALSAMANVTVFIMDMNDNTPVFEEDEY 859
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 30/120 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPG---ERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V A D DP S+GG I YRI G + F+I+++ G + T LDR
Sbjct: 1309 VSAVDTDP-SDGGRISYRITDNVGHINDSLMFTINEDNGDLTTARRLDR----------- 1356
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + ++ ED G+P S + I V D++D+EP F + +
Sbjct: 1357 --------------EVQEYYNLLLVVEDRGSPTSFSSYRFITIRVTDVDDSEPYFPEIWH 1402
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 26/105 (24%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
DP S I Y+++ F+ID TG+V +D + R
Sbjct: 1118 DPDSPWTIINYQLVWH--NEGYFAIDNVTGVVTVARPVDYEMGVRW-------------- 1161
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ TV A D+G P LS + + I + DINDN P+F
Sbjct: 1162 ----------VNFTVQATDDGNPPLSASTPVSIQIVDINDNSPVF 1196
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 68 LDRD---DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDRD D ++ +T + NG P + + + IT+ED+ND P FD Y
Sbjct: 475 LDRDAYLDKFGIWQLTVTATEDKNGLPGQATSTIVTITIEDVNDEAPTFDHRSY 528
>gi|327267535|ref|XP_003218556.1| PREDICTED: cadherin-23-like [Anolis carolinensis]
Length = 3346
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + + P R F I+ +G++ + LDR
Sbjct: 895 FQVVAIDLDEDVNGQVLYRMQVGMP--RMDFVINSSSGLINSTAVLDR------------ 940
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER E Y+ VIA D G P S T+ + V D+ND P F V Y
Sbjct: 941 -------------ERIAEYYLRVIASDAGVPSKSSTSTLTVRVLDVNDENPTFFPVVY 985
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPG---ERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+V+ATD D NG +QY ++K + F+ID +G+++T LDR
Sbjct: 2619 EVYATDKDEGLNGA-VQYTLLKTGAGNKDWEHFTIDPNSGLIQTAMRLDR---------- 2667
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E++ + ++A D G P +++ +EDI+DNEP+F R
Sbjct: 2668 ---------------EKQAVYSLIIVACDQGQPPYETMQPLQVALEDIDDNEPVFKR 2709
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D N + YRI G + KF I+ TG++
Sbjct: 2074 LRVTATDMDSGLNQ-QLNYRI--ESGAQDKFLINANTGVIS------------------- 2111
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +DR+ EK+ Y +TV+A D GTP LS T+ I ++DIND++P F
Sbjct: 2112 --VANTTIDRE----EKDNYRLTVVAVDRGTPPLSGTATVNILIDDINDSQPEF 2159
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + Y + + PG A F I K++G+ IT
Sbjct: 2514 ITMSATDHDEGDNG-VVTYNM-EGPGVEA-FKIHKDSGL-------------------IT 2551
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
T R+Q+ +R + +TV+A D G P L +++ V DINDN PMF R
Sbjct: 2552 TRRRLQSYERFN--------LTVVATDKGRPPLWGTTMLQVDVIDINDNRPMFIR 2598
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NGG + Y+I+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1216 VRATDRDT-GNGGLVNYKIVS--GSEGKFEIDESTGLITTVDYLDYE----TKTSYL--- 1265
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +Y++++ E + Q S+ + E+I
Sbjct: 1266 MNVSATDQAPPHNQGFCSVYVSLLNELDEAVQFSNVTYEAVITENI 1311
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D N + Y I E F +D+ TG + T R P
Sbjct: 1534 QVRATDRDNGLNS-VLSYYITHG-NEELTFRMDRVTGEIAT-----RPSPP--------- 1577
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER++ + V ED G P LS T+ +T+ D NDN P+F + QY
Sbjct: 1578 ----------DCERQQFYQLVVTVEDEGNPALSATTTVYVTIIDENDNAPVFRQQQY 1624
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 26/120 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKE--TGIVKTLYALDRDDPEREKEIY 58
++V A+D D P N I Y I+ A R F I+ G++ + LD +
Sbjct: 566 VRVRASDEDSPPNN-QITYSIVYASIFRNYFEINLSDGYGVISVVRPLDYE--------- 615
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q L+ IY+TV+A+D G P L+ + I V D NDN P F + Y
Sbjct: 616 -------QVLN-------GVIYLTVMAKDAGIPPLNSTVPITIEVFDENDNPPTFSKPSY 661
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D IQY + G KF I+ TG + L ALDR+ +K+ Y
Sbjct: 2407 LRVRATDADS-GRFAQIQYSLGDGEG---KFGINPNTGDIYILSALDRE----KKDHYTL 2458
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T A+ RD+P D + + ++ + ITV DIND P F + QY
Sbjct: 2459 T-----AVARDNPG------------DISSNRRENSVQVLITVLDINDCRPQFAKKQY 2499
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D S G + Y P +FS+DK+TG++ + LD + +R
Sbjct: 465 LRVLATDNDVGSYG-KVSYFFSDDPD---RFSLDKDTGVITLIGRLDFETTQRYT----- 515
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TVIA D G + + ++I V+D+NDN P F + Y
Sbjct: 516 --------------------LTVIARDGGGEETT--GRVRINVQDVNDNIPTFQKDSY 551
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 25/139 (17%)
Query: 1 MQVHATDVDPPSNGG--TIQYRIIKAPGERAKFS-IDKETGIVKTL-------------- 43
M V ATD PP N G ++ ++ E +FS + E I + +
Sbjct: 1266 MNVSATDQAPPHNQGFCSVYVSLLNELDEAVQFSNVTYEAVITENIPLGSEVLRVQARSI 1325
Query: 44 -------YALDRDDPEREKEIYITTDIRVQALDRDDPEREK-EIYITVIAEDNGTPQLSD 95
Y D + + ++ I + +REK Y + D+G P+L
Sbjct: 1326 DNLNQITYKFDPNTNAQALSLFRINGITGVITVKGQVDREKGNFYTLTVVADDGGPKLDS 1385
Query: 96 ACTMKITVEDINDNEPMFD 114
+ IT+ D NDN P FD
Sbjct: 1386 TVKVTITILDENDNSPQFD 1404
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIV-KTLYALDRDDPEREKEIYI 59
+QV ATD D NG + YRI+K F I+ +G+V + L LDR
Sbjct: 1107 VQVKATDADEGING-RVWYRIVKG-NHFNNFRINPSSGLVMRGLRVLDR----------- 1153
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A ++ + + + + VED+ND P+F + QY
Sbjct: 1154 --------------ERNSSHVLEVEAYNSEQGPMRSSVRVIVYVEDVNDEVPVFTQRQY 1198
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + TV A DNGTP+ + + + DINDN P+F + Y
Sbjct: 2346 DYEEVQWLNFTVRASDNGTPRKLAEMPVYLEIVDINDNNPIFSQPSY 2392
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKE---IY-ITVIAEDNGTPQLSDACTM 99
Y++ DP E ++ + + + R D E ++E Y +T+ A D G P LS +
Sbjct: 1766 YSIIAGDPLGE---FVISPVEGELRIRKDAELDRENIAFYNLTIAARDRGVPPLSSTVVV 1822
Query: 100 KITVEDINDNEPMF 113
+ V DINDN+P+
Sbjct: 1823 GVRVLDINDNDPVL 1836
>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
norvegicus]
gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
Length = 2919
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ PG F ID +G+++T +DR++ E K I
Sbjct: 309 LTVRATDGDAPPNA-NILYRLLEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIV 367
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+D Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 368 EASD---QGRDPGPRSSTAVVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVL 419
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 734 ISATDEDTGENARITYFMEDSIP----QFRIDADTGAVTTQAELDYED------------ 777
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 778 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 820
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y F ++ +GIV+TL LDR++ + YI
Sbjct: 835 LQISATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQ----YI- 888
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+D+ P + +TV TV D+NDN P+F++ ++
Sbjct: 889 --LRAYAVDKGMPPARTPMEVTV------------------TVLDVNDNPPVFEQDEF 926
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++Y + G F+I+ TG + LDR+ E + Y
Sbjct: 525 LHVQAIDADAGENA-RLEYSL-AGVGHDFPFTINNGTGWISVAAELDRE----EVDFY-- 576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +T+ D+NDN P F + +Y
Sbjct: 577 -------------------SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEY 615
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 419 LRVTASDRDKGSNA-LVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
T KE + + A+D G P LS+ + + V DINDN P+F
Sbjct: 467 T---------------KEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIF 505
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG V T LDR
Sbjct: 206 IDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDR---------------- 249
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A+D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 250 ---------ETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 294
>gi|66773334|ref|NP_001018872.1| protocadherin 1 gamma 2 precursor [Danio rerio]
gi|50881524|gb|AAT85342.1| protocadherin cluster 1 gamma 2 [Danio rerio]
Length = 938
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +ALDR E+E + IT+ A D G+P LS + T+ + V D+NDN P+F++ Y
Sbjct: 403 VTTKALDR---EKESDYNITITATDGGSPPLSTSMTIHLFVSDVNDNPPLFEQQVY 455
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
+S++K V T++ D E+ E+ + + LDR E++KE+ + + A D G
Sbjct: 169 YSLEKNEHFVLTVHTADE---EKYAELVLEKE-----LDR---EQQKEMDLILTATDGGL 217
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
PQ S + ITV D NDN P+FD+ Y
Sbjct: 218 PQRSGTTVIHITVLDANDNVPVFDQPVY 245
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+K+ + D NDN P
Sbjct: 512 IHAVRSFDYEQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSP 558
>gi|347543901|gb|AEP02523.1| CDH23, partial [Aselliscus stoliczkanus]
Length = 3138
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D NG + YR+ + P R F I+ +G+V T LDR
Sbjct: 901 QVVATDLDEGLNG-LVSYRMQVGMP--RLDFLINSSSGVVVTTTELDR------------ 945
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER E + V+A D GTP S T+ I V D+ND P F V Y
Sbjct: 946 -------------ERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPVVY 990
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG ++Y +K+ G R F+ID +G+++T LDR
Sbjct: 2624 EVYATDQDEGLNGA-VRYSFLKSTGNRDWEFFTIDPISGLIQTALRLDR----------- 2671
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDR 115
E + + ++A D G P + M + ++DI+DNEP+F R
Sbjct: 2672 --------------ETQAVYSLILVASDLGQPVPYETMQPMLVVLDDIDDNEPLFVR 2714
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 73 PEREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P+RE + + + V ED GTP LS + +T+ D NDN PMF + Y
Sbjct: 1582 PDREHQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPYY 1629
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I YRI G + +F I TGI++
Sbjct: 2079 LQVTATDEDSGLNGELI-YRI--EAGAQDRFHIHPVTGIIR------------------- 2116
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +DR++ E + +TV+A D GT LS + I ++D+ND P F
Sbjct: 2117 --VGNVTIDREEQESYR---LTVVATDRGTVPLSGTVIITILIDDVNDCRPEF 2164
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D GG + YRI+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1219 LVVRATDRDT-GPGGLVTYRILS--GAEGKFEIDESTGLITTVDYLDYE----TKTSYL- 1270
Query: 61 TDIRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +YIT++ E + Q S+A +E++
Sbjct: 1271 --MNVSATDQAPPFNQGFCTVYITLLNELDEPVQFSNASYEVAILENL 1316
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 32/116 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D SN + Y + + PG A F +DK++G+V T
Sbjct: 2519 ITMMATDQDEGSNA-ELAYSL-EGPGMEA-FHVDKDSGLVTT------------------ 2557
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
P R E + +TV+A D G P L + + V D+NDN P+F R
Sbjct: 2558 ----------QRPLRSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVR 2603
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D N I+Y + G KFSI+ TG + L LDR+ +K+ YI
Sbjct: 2412 LRVTATDADS-GNYAVIEYGLGNGEG---KFSINPTTGDIYVLSPLDRE----KKDHYIL 2463
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T A+ RD+P D + + ++ + I V D+ND P F + QY
Sbjct: 2464 T-----AIARDNP------------GDIASNRRENSVQVVIQVLDVNDCRPEFSKPQY 2504
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IY+TV+A+D G P L+ + I V D NDN P F++ Y
Sbjct: 627 IYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFNKPAY 666
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG T+ Y II A F IDK TGI+ LD + + +T
Sbjct: 1645 VTVQALDLDEGPNG-TVVYSII-AGNIIDTFHIDKHTGIISAAKELDYEICHGRYTLIVT 1702
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ L R +L+ T+ + V DINDN P F R
Sbjct: 1703 ATDQCPILSR---------------------RLTSTTTVLVNVNDINDNVPTFPR 1736
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV A DNG+P + + + + DINDN P+FD+ Y
Sbjct: 2351 DYEEVHWLNFTVRAADNGSPPRAAEIPVYLEIVDINDNNPIFDQPSY 2397
>gi|190336809|gb|AAI62581.1| Protocadherin 1 gamma 2 [Danio rerio]
Length = 938
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +ALDR E+E + IT+ A D G+P LS + T+ + V D+NDN P+F++ Y
Sbjct: 403 VTTKALDR---EKESDYNITITATDGGSPPLSTSMTIHLFVSDVNDNPPLFEQQVY 455
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
+S++K V T++ D E+ E+ + + LDR E++KE+ + + A D G
Sbjct: 169 YSLEKNEHFVLTVHTADE---EKYAELVLEKE-----LDR---EQQKEMDLILTATDGGL 217
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
PQ S + ITV D NDN P+FD+ Y
Sbjct: 218 PQRSGTAVIHITVLDANDNVPVFDQPVY 245
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+K+ + D NDN P
Sbjct: 512 IHAVRSFDYEQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSP 558
>gi|327277655|ref|XP_003223579.1| PREDICTED: desmoglein-1-like [Anolis carolinensis]
Length = 1277
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 25/120 (20%)
Query: 1 MQVHATDVDPPSN-GGTIQYRII-KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
M++ ATD D P+N I Y+I+ + PG +KF ++ G + LDR++ + +
Sbjct: 178 MKITATDADEPNNLNSKIAYKILSQTPGGPSKFILNAANGELHIANILDREEAGQYSLV- 236
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VQA DRD G +S C +++V+D+NDN P+ + Y
Sbjct: 237 ------VQATDRD----------------GGPDGISSECLCQVSVDDVNDNFPVLSQSSY 274
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 30/117 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD+D N RI E F+ID ETG EI+I
Sbjct: 583 QVTATDLDSGDNA-----RISYTMDESEMFAIDVETG-----------------EIFIK- 619
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E ++V A D+G P +D ++ITV DINDN+P F +Y
Sbjct: 620 ----EGLDR---ELTPSYTLSVTATDHGRPSKADTTDIEITVADINDNDPKFLEPKY 669
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D NG ++Y FSID G+++T +LDR E +
Sbjct: 684 LKISATDADSGLNG-RVRYTFEGGFSGDGHFSIDPTLGVIRTAESLDR-------EKVAS 735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++R A+DR PER + I+ IT+ DINDN P F
Sbjct: 736 YELRAFAVDRGSPERSVSVVIS------------------ITLNDINDNAPQF 770
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A+D D + G + Y ++ R++ F+ID +G + T +LDR+ I
Sbjct: 51 ITASDPDE-GDAGRLTYSLLATRDGRSQNMFTIDPSSGQLTTTQSLDRES--------IA 101
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T ++ +IA D G P S ++ I V+DIND+ P+F++ Y
Sbjct: 102 TH-----------------HLQIIASDYGHPSQSAYASLIIYVDDINDHAPLFEQKSY 142
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D NG I+Y I+ G F+ID G + T LDR E + +
Sbjct: 157 ITVRASDEDSGHNG-EIEYSILNPSGPNEVFNIDPRVGSITTNKKLDR-------EKHAS 208
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++VQA D+ ER+ E+ ++I V D NDN+P F + Y
Sbjct: 209 YTLQVQASDKAMVIERKTEV-----------------VQVQINVLDENDNKPQFSQSSY 250
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V A D D N + Y I A + ID +TG + T+ LDR+ ER
Sbjct: 372 MRVQAYDSDSGLNSALV-YSIHDAIDD-LPIEIDTQTGALTTVKELDREKHER------- 422
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
RV+A D+ DP R S ++I + D+NDN P+F
Sbjct: 423 FSFRVEARDQGDPVR------------------SANAGVEINIRDVNDNNPIF 457
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER + V A+D+G+P S++ T+ + V D+NDN P F
Sbjct: 311 DYERMNSYRLNVRAQDSGSPHRSNSTTVLVRVIDVNDNSPRF 352
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P ++Y I + G+ F I+ TG + L ALDR
Sbjct: 2282 ITVQAYDADTPPLNSLVRYFIKE--GKPDTFKINASTGEISLLRALDR------------ 2327
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +++ A D G+P L+ T+KI V+D+ND+ P F R Y
Sbjct: 2328 -------------EAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSY 2372
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
I ++ F ID + G +KTL+ DR+ E+ TT + +L+
Sbjct: 1125 IFSLSNSQSDFVIDPKNGFIKTLHVFDRE------ELVQTTGLNYLSLE----------- 1167
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG+P+L D + + V D+NDN P F R Y
Sbjct: 1168 --ATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPY 1203
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D NG I+Y+I ER +F++D +G V L LD D +
Sbjct: 3122 LTVNASDDDQGPNG-MIRYKI-SGGNERKEFAVDPYSGAVTILQPLDYDTIQ-------- 3171
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + AED G S + IT+ DINDN P F++ Y
Sbjct: 3172 -----------------EYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIY 3212
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T++A DNG P +S C + + V D N+N P FD+ +Y
Sbjct: 2960 ENMYSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEY 3002
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 31/116 (26%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D N I+Y ++ G++ +F ID++ GI+ T LDR+ E EIY
Sbjct: 2391 ATDKDIGLNA-KIRYSLL---GDKVDRFKIDQDAGIITTSAILDRE----ETEIY----- 2437
Query: 64 RVQALDRDDPEREKEIYITVIAED-NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y TV+A+D + T + A + ITV D NDN P F +Y
Sbjct: 2438 ----------------YFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKY 2477
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+D G P LS T+ V D+NDN P+FD + Y
Sbjct: 1895 RLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSY 1943
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ V A D G P LS +++ +ED+ND+ P+FD Y
Sbjct: 950 SLHVEVTASDGGEPPLSSKQLVRVVIEDVNDHTPVFDHTSY 990
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 420 VRVNGVLDREEISKYN---LTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEY 473
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D+D NG + Y++ F ID E+G + T LDR++
Sbjct: 2702 VKVSAEDLDSGENG-QVTYKLTD--DFDGTFEIDSESGEIYTNARLDREE---------- 2748
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
P E +TV A D G PQ++ T+ +TV D NDN P F R+
Sbjct: 2749 -----------TPAYE----LTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSRL 2789
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 28/108 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N Y II E+A F ID ++G ++T LDR
Sbjct: 3445 DVRPQNN--QFSYSIIGGNIEQA-FKIDPQSGQIETARFLDR------------------ 3483
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E E + V D G P + T+KI + DINDN P FD
Sbjct: 3484 -------ETTPEYSLVVGGIDTGLPPQTGTTTVKIHITDINDNGPTFD 3524
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D P N IQY I P ++ F+ID++TG V Y+ D + E ++Y
Sbjct: 3227 FQVKATDIDSPKNA-IIQYSISDGP-DKDMFAIDQKTGRVTAKYSFDYE----ENDLYT- 3279
Query: 61 TDIRVQALDRDDP 73
I + A + D P
Sbjct: 3280 --INIVASNPDSP 3290
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 32/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD NG ++Y I R FSI ++TG+V+ L+
Sbjct: 2170 LQVSATDVDDGLNG-RVRYSINSGDTNR-DFSIAEDTGVVRVAKNLNY------------ 2215
Query: 61 TDIRVQALDRDDPEREKEIYITVIAED-----NGTPQLSDACTMKITVEDINDNEPMF 113
ER+ +TV AED G +D + I+V DINDN P F
Sbjct: 2216 -------------ERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTF 2260
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A DNG P+LS I VED NDN P F
Sbjct: 1377 LNITASDNGNPRLSTTILFAIAVEDANDNPPSF 1409
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D P NG Y++I R IDK +G+V T +DR E+
Sbjct: 3542 MTLSAKDPDLPPNGAPFTYKLIGGK-HRDFVKIDKHSGVVVTTKMIDR-------EVIPQ 3593
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEPM 112
+I V+ D P+ + + IT+ + + N +P S A ++ + V N P+
Sbjct: 3594 LEILVEVEDSGSPKMKSQHVITIEVLDQNDSP--SSARSVHVLVYAFNGVFPV 3644
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + ++ + D E + ++ + A D G P + +T+ D+NDN P+FD Y
Sbjct: 190 TSYLHLETTGKLDRESQGFYFLNISARDGGAPPKFGYLQVNVTILDVNDNPPIFDHSDY 248
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VIA+D G P S T+ + V D+NDN P F + Y
Sbjct: 649 IHVIAKDQGLPPQSSTATVYLNVIDVNDNSPEFYPLNY 686
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 30/117 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V D P G ++Y +I+ G+ F +DK TG++ + +LDR+
Sbjct: 1752 SVATVKADDPDTIGVLEYSLIR--GDDGHFVLDKNTGVLTLVDSLDRE------------ 1797
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K++Y + +G T++IT D NDN P F Y
Sbjct: 1798 --------------TKDVYKLTVRASDGNQHTDTVLTVQIT--DTNDNPPAFLETAY 1838
>gi|405961425|gb|EKC27229.1| Neural-cadherin [Crassostrea gigas]
Length = 2318
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 29/123 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRI--IKAPG---ERAKFSIDKETGIVKTLYALDRDDPEREK 55
++V ATD + NG ++Y I IK G E+ F I+ TG + T LDR+
Sbjct: 91 VKVTATDRNRGQNG-KLEYSITSIKELGDNQEKNYFRINSTTGQIYTREKLDRE------ 143
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ K ++ITV +D G+ L D CT + ++DINDN+P F
Sbjct: 144 -----------------TQFSKNLFITVKVQDKGSNPLDDYCTFPVNIQDINDNDPSFGT 186
Query: 116 VQY 118
Y
Sbjct: 187 TDY 189
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P +I T + V + D E+ V+A D GTP LS T + ++DINDN
Sbjct: 786 EPSPAFKINNATGVVVTTVGDLDREKNPVYTFQVVAMDAGTPPLSATATATVNIKDINDN 845
Query: 110 EPMFDRVQY 118
P+F++ Y
Sbjct: 846 NPVFEKKIY 854
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQA-LDRDDPEREKEI 79
I + P ++S+ ++ ++ +L++++R+ T I + LDRD P+
Sbjct: 656 IHRNPTNEIEYSLSQDDAVINSLFSINRN----------TGAISINGKLDRDQPDGRDVY 705
Query: 80 YITVIAEDN--GTPQLSDACTMKITVEDINDNEPMFD 114
TV+A D L+ T+++ D+NDN+P +D
Sbjct: 706 QFTVLAVDEPAAASHLTGYATVQVFPLDVNDNQPKYD 742
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D D T+ Y + G +F ID +G++ + DR+ K+ YI
Sbjct: 430 SVSAIDADETEAFKTVTYALNPNGGTTTNEFQIDPNSGMISSRMQFDRE----TKDFYI- 484
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++V A+D R T A + G+ + +++++D+NDNEP F++ Y
Sbjct: 485 --LKVYAIDGAPSSRG-----TSGAHNTGSAGV------RVSIKDVNDNEPYFEQELY 529
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGPNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +FSID +G V + LD Y T
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFSIDSSSGQVALIGKLD----------YET 1277
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
T + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1278 T---------------PAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q+LDR E +++ +TV A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2319 IQSLDR---ESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASKMY 2369
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQLSY 1001
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D NG T+ + + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 605 LRATDRDLGDNG-TVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDRE----EQAFY---- 655
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -----------------SLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQY 694
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+K E FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVKG-NEENSFSINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +TV + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQI 2776
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + T+ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPML 3510
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P+ E DR+ R++ + TVIA D
Sbjct: 1124 AVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFDRESLMRQRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPRF 1210
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVGGNANQ-EFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 26/99 (26%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+I+ G ++F+I+ TG + T LDR E +
Sbjct: 2398 VIRIIGGNSQFTINPSTGQIITSALLDR-------------------------ETKDNYT 2432
Query: 81 ITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+ V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2433 LVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRFQHHPY 2471
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +T+ A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTLQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F ++Y
Sbjct: 2932 ILKYQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKY 2988
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGPNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +FSID +G V + LD Y T
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFSIDSSSGQVALIGKLD----------YET 1277
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
T + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1278 T---------------PAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPK 1317
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q+LDR E +++ +TV A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2319 IQSLDR---ESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASKMY 2369
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQLSY 1001
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D NG T+ + + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 605 LRATDRDLGDNG-TVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDRE----EQAFY---- 655
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -----------------SLLVVATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQY 694
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3612
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+K E FSI+ TG ++++ LDR
Sbjct: 2690 LTVSAMDKDSGPNG-QLDYEIVKG-NEENSFSINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +TV + D G+P S + + I + D NDN P F ++
Sbjct: 2736 -------------EKVSQYMLTVKSSDKGSPSQSTSIKVIINILDENDNAPRFSQI 2778
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3473
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + T+ +T+EDINDN PM
Sbjct: 3474 -------------TLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPML 3512
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 29/103 (28%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I YRII G ++F+I+ TG + T LDR E +
Sbjct: 2399 ISYRII---GGNSQFTINPSTGQIITSALLDR-------------------------ETK 2430
Query: 77 KEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+ V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2431 DNYTLVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRFQHHPY 2473
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P+ E DR+ R++ + TVIA D
Sbjct: 1124 AVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFDRESLMRQRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPRF 1210
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVGGNANQ-EFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +T+ A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTLQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2895 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2933
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F ++Y
Sbjct: 2934 ILKYQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTINIVDSNDNAPQFLTIKY 2990
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGPNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y +IK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDEGSNG-LIHYSVIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTVSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + + Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPSTILQVLARD-----DDQGSNSQISYVLFGGNEDNAFTLSASGELRVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ +TV A D+G+P L+ T+ I V+D+NDN P F +Y
Sbjct: 2321 SLDR---ETKEHFVLTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRY 2369
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSFILTVCVHDVNDNPPVFDQLSY 1001
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A + F +D +G + T+ +LDR+ E+ Y
Sbjct: 607 ATDRDLGDNG-TVRFSLQEAETVQKSFRLDPVSGRLSTISSLDRE----EQAFY------ 655
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 ---------------SLLVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQY 694
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D +N +I+ G ++F+I+ TG + T LDR+ KE Y
Sbjct: 2386 VNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDRE----AKENYT--- 2432
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
+ V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2433 ------------------LVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVYAADGDEGTNG-QVRYGIVGG-NVNQEFRIDSVTGTITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNQENS-FSINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSQYILTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2776
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + Y+ +R P+ E DR+ R + + TVIA D
Sbjct: 1124 AVDKDFGPNGEVRYSFERVQPDFELHAVSGKITNTHQFDRESLMRRRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y ++ G KFSI G V+ LDR+D
Sbjct: 2071 KAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDREDVSNYT------ 2121
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2122 -------------------LMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREATPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPIFGSSHY 255
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TG++ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIRYGI-SSGNEGGVFAINSSTGVLILAKALDYEQCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A D G + CT+ + V D+NDN P+F +Y
Sbjct: 3162 ------------------MTISATDGGWVARTGYCTVTVNVIDVNDNSPVFTPDEY 3199
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2406 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2451
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2452 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 2496
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE----IYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1199 FTIDTRNGFIKTLRPFDR-------EALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVS 1251
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1252 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1283
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TGI+ R + +
Sbjct: 1624 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGIITFTPGPQFKQEVRYQLTLKS 1680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-----TPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I +G PQ + +V +NEP+
Sbjct: 1681 TDEAVQS-----ERRSSEVYITIITPGSGESESSVPQFEQRSKLSGSVY---ENEPI 1729
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1984 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 2032
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEIYI 59
M + A+D D P NGG Y++I ++ S+D+ +G+V++ + DR+ P E I +
Sbjct: 3671 MTLMASDPDLPRNGGPFTYQLIGGK-HKSWLSVDRNSGVVRSTTSFDREMTPVLEAIIEV 3729
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
ED+G P+ + ITV D NDN
Sbjct: 3730 --------------------------EDSGKPKQKSQHLLTITVLDQNDN 3753
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 446 VRVNGVLDREEIGKYN---LTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1513 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1564
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1565 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1601
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2298 LQVSATDVDEGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2343
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2344 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2384
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I ER FS+D+ TG + LD D
Sbjct: 3249 LTVGATDDDTGPNG-MLRYSI-SGGNERQDFSVDERTGGIVIQQQLDYD----------- 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+F+ +Y
Sbjct: 3296 --------------LIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEY 3339
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLVTTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 3087 ENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEY 3129
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 2537 RFHIDSETGEISTATTLDRE----ETSVY---------------------HLTLMAQDSS 2571
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2572 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 2601
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y II + F ID +TG + T LDR+
Sbjct: 3567 VKAIDKDVRTQNNQFSYSIING-NLKQSFKIDVQTGEISTASRLDRE------------- 3612
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 3613 -------------ETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 3651
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + + + D NDN P+FD QY
Sbjct: 2226 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLVRILDENDNSPVFDPKQY 2283
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 33/114 (28%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG-ERA---KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
ATD D +NG ++ + + AP ER +F++D TG + T LDR
Sbjct: 623 ATDHDQGTNG-SVTFAL--APSVERLYPLQFALDALTGQLTTRRPLDR------------ 667
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMF 113
E+ + I VIA D G P A T+ + V D+NDN+P F
Sbjct: 668 -------------EKMSQYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
>gi|339258508|ref|XP_003369440.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966325|gb|EFV50919.1| putative cadherin domain protein [Trichinella spiralis]
Length = 584
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 30/122 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRII---KAPGERAK-FSIDKETGIVKTLYALDRDDPEREKE 56
+QV A D D NG + Y +I + +K F ID TG++ T
Sbjct: 464 LQVQAHDADSGDNG-RVHYSLIYDDTSDQHTSKWFKIDSHTGLITTS------------- 509
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
D D E +TV+AED G P+L++ + +T+ D+NDN P+FD+
Sbjct: 510 ------------DLVDCEVSYNPKLTVLAEDYGQPKLNNTAVVSVTILDVNDNPPLFDKQ 557
Query: 117 QY 118
Y
Sbjct: 558 LY 559
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +RE+ I + V A D G P LSD T+ +T+ D+NDN P FD+ +Y
Sbjct: 183 LDRE--QRERYI-LKVSASDGGQPPLSDVLTVNVTIVDVNDNAPQFDKPRY 230
>gi|405968293|gb|EKC33375.1| Neural-cadherin [Crassostrea gigas]
Length = 2658
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 24/117 (20%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG I Y ++ + F ++ E G V T DR E E +
Sbjct: 571 VTATDPDRGENG-KITYSVVTPNNQEQNFQVNAENGTVYTKKMFDR---ESEAGL----- 621
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +T+ AED+G + QL+ CT + ++D+NDN P+FD Y
Sbjct: 622 --------------RGYSVTIKAEDHGESQQLNTLCTFWVKIKDLNDNSPLFDTESY 664
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 63 IRVQA-LDRDDPEREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++QA LD +RE Y I V+A D G P + T++I V DINDN PMF
Sbjct: 1492 VKIQAGLDGQTLDRETNDYYSIQVLAIDKGIPAQTGTATLRIKVLDINDNPPMF 1545
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 38/130 (29%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D + Y ++ G KF ID + G++ T Y DR
Sbjct: 905 ITVKAVDPDLQEPNNVVSYSLVPDKYGAYQKFQIDPQRGLISTNYTFDR----------- 953
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDN-----------GTPQLSDACTMKITVEDIND 108
E K YITV+A+D GTP + M +T+ D ND
Sbjct: 954 --------------ETLKVYYITVMAQDGRASDTPYHEPPGTPNSATTQVM-VTIADKND 998
Query: 109 NEPMFDRVQY 118
N P F+++ Y
Sbjct: 999 NTPYFEKLLY 1008
>gi|195325658|gb|ACF95737.1| protocadherin-18 [Mustela putorius furo]
Length = 784
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +T+IAED GTP LS + + DINDN P F R +Y
Sbjct: 275 DREKRSEYSLTIIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 321
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 50 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 102
>gi|395855504|ref|XP_003800198.1| PREDICTED: protocadherin-18 [Otolemur garnettii]
Length = 1132
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 421 DREKRSEYGLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 467
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 196 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 248
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF-SIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D D N I Y+I++ +KF +ID TG + T +D
Sbjct: 858 IQLFANDRDSGRNR-LISYQILEERSNASKFFTIDSSTGEITTTQVIDY----------- 905
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +E YI V A D+G P LS + ITV D+NDN P F + QY
Sbjct: 906 --------------EANQEFYIKVRAMDHGVPPLSSETLVAITVLDVNDNPPKFSQPQY 950
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
GT+ Y II G+ KF+ID E G ++TL LDR++
Sbjct: 1080 GTVDYIIINKLGQE-KFAID-EMGRIETLQKLDREN-----------------------S 1114
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I I ++A+D G CT+KI + D NDN P F +Y
Sbjct: 1115 TERVIAIKIMAKDAGGK--VAFCTVKIILADENDNPPQFKASEY 1156
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D S+G + Y + P R F+ID E+G + TL LD + E K
Sbjct: 1385 IQVTANDQDTGSDG-QVTYSLRSEPDNIRKLFTIDSESGWITTLKELDCEVQETYK---- 1439
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
V+A D+G QLS +++T+ D NDN P F
Sbjct: 1440 ---------------------FFVVASDHGRKIQLSSQTLVEVTITDENDNAPQF 1473
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 26/102 (25%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPERE 76
I Y I+ A + F ID +TG ++ LDR++ + ++VQ
Sbjct: 1925 ITYSIV-AGNPLSHFIIDPQTGEIRIAKYLDREEIS-------SYSLKVQ---------- 1966
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A DNG LS T+ I V D+NDN P F ++ Y
Sbjct: 1967 --------ATDNGQEPLSSDTTVLIRVSDVNDNPPRFFQLNY 2000
>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
Length = 2676
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATDVD +NG + Y I E F+ID TG + T LDR
Sbjct: 2089 VKVTATDVDSGTNG-KVTYSIWTG-NEAGVFTIDSTTGEITTAKLLDR------------ 2134
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + + D+G P S C +K+ V D+NDN P+FD
Sbjct: 2135 -------------ETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFD 2175
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V+A D D SN + Y I R+ F+ID +G++ T LDR
Sbjct: 411 VNAVDQDFGSNSELV-YTIANTTESRSYLHWFAIDPSSGMITTATDLDR----------- 458
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++ +TV+ D G+P LSD C++ + + D NDN+P F++ Y
Sbjct: 459 --------------EQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSY 503
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D +NG + I++ ++ F+ID++TG+++T ALD
Sbjct: 2427 VNVSAADKDSGANGRV--WFAIQSGDDKGSFAIDRKTGVIRTQRALDH------------ 2472
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E K +++V A D G+P + ++ I V D+NDN P+F
Sbjct: 2473 -------------ETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVF 2512
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+D E E + VIA D+GTP+ S + +K+ V+D+NDN P F + Y
Sbjct: 974 LDREDIE---EYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASY 1021
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
G S DK T + +Y++ + + + I T + +Q+ D E+ +Y+TV A
Sbjct: 723 GHVHAISRDKGTN-AEVVYSISKGNTDNIVLINSTGTLYLQS--EVDHEKIPSLYLTVQA 779
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFD 114
+D GTP L + I V DINDN P F+
Sbjct: 780 KDKGTPPLFGYANVTIAVIDINDNSPQFN 808
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 22/95 (23%)
Query: 19 YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78
+ I + RA F I+ ETG+++T + +DR++ ++V+A D+ E+++
Sbjct: 1366 WYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYS-------LKVRATDQAFTEQDR- 1417
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
L + T+KI ++D+NDN P F
Sbjct: 1418 --------------LYNTATLKIIIQDLNDNAPKF 1438
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D +N IQY I +A F I TG+ I
Sbjct: 192 LQVSASDKDIGTNA-EIQYSIETHSDPQAIFGIHPTTGV-------------------IV 231
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPM 112
++R+ D E ++ I V AED G+ QLS + ++I V D+NDN P+
Sbjct: 232 NNVRL------DYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPV 278
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D D SNG + YR + A+F +DK+TG + T LDR
Sbjct: 1038 VSASDSDEGSNG-HVTYRF---DTQVAQFIVDKQTGKITTSQVLDR-------------- 1079
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +++A D G+ D + + V D+ND P F + +Y
Sbjct: 1080 -----------EAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKY 1124
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER + + A D G P + ITVED NDN+P F V Y
Sbjct: 131 DRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSY 177
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 26/113 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG ++Y+I+ + F I++ TG++ TL ALD + R Y+
Sbjct: 1246 VLAVDSDQGDNG-KVRYKIVNGNTD-GTFKINETTGVISTLRALDFEVTNR----YV--- 1296
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+RV A D +++K Y QL + I VED NDN P FD+
Sbjct: 1297 LRVSATDMGK-KQQKTSY-----------QL-----VTIYVEDANDNRPTFDK 1332
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 3 VHATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D S G + YR+ + + F ++ TG
Sbjct: 1876 VTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTG----------------------- 1912
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+R A + P+ +YI IAED+G+P L ++I + +I D+ P F
Sbjct: 1913 SVRTSAGFSNPPQGRHALYI--IAEDHGSPPLRGYGIVQIVIGNIQDDPPRF 1962
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 25/117 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+++ATD D +N + + +I G+ F IDK +G + T D ++ +Y
Sbjct: 2534 EINATDRDSGANA-RLSFTVIGGTGQ-GLFLIDKFSGWLTTNITFDYEN----TAVY--- 2584
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +T+ A D G P LS T+ + V D ++ +P F+R+ Y
Sbjct: 2585 ----------------QYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDY 2625
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D I Y I+ P FS+++ TG++ + LDR+ R
Sbjct: 1139 LTLIATDDDQQGPNSDITYMIVAGP---KAFSLNQVTGVLTLVSPLDREVTHRH------ 1189
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMF 113
+ V+A D G Q + T ++I V D+NDN P+F
Sbjct: 1190 -------------------ILHVVASDKGGNQSLETITYIEINVLDVNDNYPVF 1224
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E ++ + D G P + + +I V D+ND P FDR Y
Sbjct: 345 QSLDR---ETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTY 394
>gi|85725305|gb|ABC79270.1| protocadherin-15-CD2 isoform 3 [Mus musculus]
Length = 1162
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 294 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 349
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 350 VVTDVNDNAPVFD 362
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG TI+Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 698 VSATDPDLGLNG-TIKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 746
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 747 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 785
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 594 ATDGDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTISSLDRE----EQAFY------ 642
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 643 ---------------SLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQY 681
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y +IK ER +F+ID +G
Sbjct: 1217 LRVSASDVDE-GNNGLIHYSVIKGNEER-QFAIDSTSG---------------------- 1252
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+V + R D E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1253 ---QVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPK 1304
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3515 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3561
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3562 -------------EQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3597
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D+D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2373 VNASDIDASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2412
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V+A D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2413 -----------ETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2458
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 951 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 988
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2088 TIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMY 2146
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3413 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3458
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3459 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3497
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ +++ D + K Y L + + + + +++V Q
Sbjct: 2253 VNVPENLGTLPRTVLQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELQVTQ 2307
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G P L+ T+ + V+DINDN P F Y
Sbjct: 2308 SLDR---ETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMY 2356
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y II E + FSI+ TG ++++ LDR
Sbjct: 2675 LTVSAVDKDSGPNG-QLDYEIINGNKEHS-FSINHATGEIRSIRPLDR------------ 2720
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + + V + D G+P S + + I + D NDN P F ++
Sbjct: 2721 -------------EKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQI 2763
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2161 IQVFAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------ 2206
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2207 -------------EKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2251
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1111 AIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATD 1170
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1171 QGLPQPLKDQATVHVYMKDINDNAPKF 1197
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1046 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1092
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 24 APGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81
+PG + A F+ K+ G + L R ER K + + ++ D E K+ Y+
Sbjct: 3246 SPGTQVLAVFATSKDIGTNAEITYLIRSGNERGKFRINSRTGEISVIEELDYELCKDFYL 3305
Query: 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D GTP LS T+ + + D+NDN P F++ Y
Sbjct: 3306 VVEAADGGTPALSAVATVNVNLTDVNDNAPQFNQEVY 3342
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G +QY I G +F+ID+ETG++ T LDR
Sbjct: 1059 LQVTARDEDSGRDG-EVQYSIRDGSG-LGRFNIDEETGVIYTADVLDR------------ 1104
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1105 -------------ETTGSYWLTVYAADRGVVPLYSTIEVYIEVEDVNDNAPL 1143
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A+D D SN +QY+I++ F ID +G++ T LD + +R
Sbjct: 2303 LQVVASDADSESNR-LVQYQIVQDTFNSTDYFHIDSSSGLILTARLLDHESVQRST---- 2357
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D+G P LS + I V D NDN P+F+++ Y
Sbjct: 2358 ---------------------LKVRATDSGFPPLSSEVLVTIFVTDTNDNPPVFNQLIY 2395
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A+D D NG + I +F+ID ETG ++ L LDR+ + ++Y+
Sbjct: 742 LKIQASDADAGFNGKVV--FTISDGNTDGRFAIDLETGQLRVLMPLDRE----QTDLYL- 794
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + + VED NDN P+F + Y
Sbjct: 795 --------------------LNITIYDLGKPQRSSWRLLTVNVEDANDNRPVFLQESY 832
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + A G FSID+ +GI+ LDR E+ +
Sbjct: 3148 RVQATDPDVGVNRKVVYSLADSANG---YFSIDRSSGIIILEQPLDR-------EVQSSY 3197
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I V+A D+ +A LS T+ ITV DINDN P+F+R Y
Sbjct: 3198 NISVKASDQS----------VALA-------LSSFATVTITVLDINDNPPVFERRDY 3237
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQ--YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV A D D +NG Y PG F ID +G + TL LD
Sbjct: 2830 IQVKAEDPDWGANGQVTYALYSDTDLPGVTQAFGIDSNSGWISTLRDLDH---------- 2879
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E + V+A D G LS ++ +TV D+NDN P F
Sbjct: 2880 ---------------EADPMFTFAVVASDLGEAVSLSATASVAVTVTDVNDNAPAF 2920
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG TI+Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TIKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 605 LRATDRDLGDNG-TVRFSLQEAETDQRSFRLDPVSGKLSTIASLDRE----EQAFY---- 655
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F +QY
Sbjct: 656 -----------------SLLVLATDLGSPPQSSMVRINVSLLDVNDNSPVFYPIQY 694
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++VI D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 1001
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G+P L+ T+ + V+DINDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLMITATDSGSPALTGTGTINVIVDDINDNVPTFASKMY 2369
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y ++K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSVMKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2386 VNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2425
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -----------ETKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
T D V+ D E +TV+A D G P LS + + + V DINDN P+F
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVF 2154
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2174 IQVYAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P F+ Y
Sbjct: 2220 -------------EKTPTYSLTVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPY 2264
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNKEHS-FAINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKIPQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 66 QALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
+ DR+ R++ + TVIA D G PQ L D T+ + ++DINDN P F
Sbjct: 1159 RQFDRESLMRQRGTAVFSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|326914512|ref|XP_003203569.1| PREDICTED: protocadherin Fat 3-like, partial [Meleagris gallopavo]
Length = 1203
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID+ETG++ T LDR
Sbjct: 1064 LQVVARDEDSGRDG-EIQYSIRDGSG-LGRFSIDEETGVIYTADVLDR------------ 1109
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E K ++TV A D+G L + I VED+NDN P+
Sbjct: 1110 -------------ETTKSYWLTVYATDHGVVPLYATIEVYIEVEDVNDNAPL 1148
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + Y I + ++F+ID ETG++K L LDR+ + ++YI
Sbjct: 747 LRIKAYDADSGFNGRVV-YTISDGNAD-SRFNIDIETGVLKVLMPLDRE----KTDLYI- 799
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + +TV D NDN+P+F + Y
Sbjct: 800 --------------------LNITIYDLGNPQKSAWRLLTVTVGDANDNKPIFLQDSY 837
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D P ++Y I + G+ F I+ TG + L ALDR
Sbjct: 592 ITVQAYDADTPPLNSLVRYFIKE--GKPDTFKINASTGEISLLRALDR------------ 637
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +++ A D G+P L+ T+KI V+D+ND+ P F R Y
Sbjct: 638 -------------EAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSY 682
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D NG I+Y+I ER +F++D +G V L LD D +
Sbjct: 1432 LTVNASDDDQGPNG-MIRYKI-SGGNERKEFAVDPYSGAVTILQPLDYDTIQ-------- 1481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + AED G S + IT+ DINDN P F++ Y
Sbjct: 1482 -----------------EYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIY 1522
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T++A DNG P +S C + + V D N+N P FD+ +Y
Sbjct: 1270 ENMYSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEY 1312
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 31/116 (26%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D N I+Y ++ G++ +F ID++ GI+ T LDR+ E EIY
Sbjct: 701 ATDKDIGLNA-KIRYSLL---GDKVDRFKIDQDAGIITTSAILDRE----ETEIY----- 747
Query: 64 RVQALDRDDPEREKEIYITVIAED-NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y TV+A+D + T + A + ITV D NDN P F +Y
Sbjct: 748 ----------------YFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKY 787
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+D G P LS T+ V D+NDN P+FD + Y
Sbjct: 205 RLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSY 253
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D+D NG + Y++ F ID E+G + T LDR++
Sbjct: 1012 VKVSAEDLDSGENG-QVTYKLTDD--FDGTFEIDSESGEIYTNARLDREE---------- 1058
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
P E +TV A D G PQ++ T+ +TV D NDN P F R+
Sbjct: 1059 -----------TPAYE----LTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSRL 1099
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 28/108 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N Y II E+A F ID ++G ++T LDR
Sbjct: 1755 DVRPQNN--QFSYSIIGGNIEQA-FKIDPQSGQIETARFLDR------------------ 1793
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E E + V D G P + T+KI + DINDN P FD
Sbjct: 1794 -------ETTPEYSLVVGGIDTGLPPQTGTTTVKIHITDINDNGPTFD 1834
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D P N IQY I P ++ F+ID++TG V Y+ D + E ++Y
Sbjct: 1537 FQVKATDIDSPKNA-IIQYSISDGP-DKDMFAIDQKTGRVTAKYSFDYE----ENDLYT- 1589
Query: 61 TDIRVQALDRDDP 73
I + A + D P
Sbjct: 1590 --INIVASNPDSP 1600
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 32/118 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD NG ++Y I R FSI ++TG+V+ L+
Sbjct: 480 LQVSATDVDDGLNG-RVRYSINSGDTNR-DFSIAEDTGVVRVAKNLNY------------ 525
Query: 61 TDIRVQALDRDDPEREKEIYITVIAED-----NGTPQLSDACTMKITVEDINDNEPMF 113
ER+ +TV AED G +D + I+V DINDN P F
Sbjct: 526 -------------ERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTF 570
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D P NG Y++I R IDK +G+V T +DR E+
Sbjct: 1852 MTLSAKDPDLPPNGAPFTYKLIGGK-HRDFVKIDKHSGVVVTTKMIDR-------EVIPQ 1903
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEPM 112
+I V+ D P+ + + IT+ + + N +P S A ++ + V N P+
Sbjct: 1904 LEILVEVEDSGSPKMKSQHVITIEVLDQNDSP--SSARSVHVLVYAFNGVFPV 1954
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 30/117 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V D P G ++Y +I+ G+ F +DK TG++ + +LDR+
Sbjct: 62 SVATVKADDPDTIGVLEYSLIR--GDDGHFVLDKNTGVLTLVDSLDRE------------ 107
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K++Y + +G T++IT D NDN P F Y
Sbjct: 108 --------------TKDVYKLTVRASDGNQHTDTVLTVQIT--DTNDNPPAFLETAY 148
>gi|242024529|ref|XP_002432680.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518150|gb|EEB19942.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1860
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 27/104 (25%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
TI Y IK E F ID +G+V+ +KE+ D E
Sbjct: 932 STIAYYDIKP--ESPFFKIDNTSGVVRL-----------KKEV--------------DYE 964
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
REK++ T+ A D+G PQ S + + + V ++NDN+P+F + +Y
Sbjct: 965 REKKLNFTIWAHDSGVPQFSSSAEVIVNVINVNDNDPVFSQTEY 1008
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A D D SN ++Y+I+K G F I+++TG+V Y++
Sbjct: 693 SVIAHDSDSGSNA-EVKYQILK--GGFGDFHINEDTGVV-----------------YVS- 731
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q LD D R I +IA D G PQL+ T+ + V + ND +P F
Sbjct: 732 ----QKLDYD---RHSNYSIEIIAFDAGVPQLTGTTTLLVEVINSNDKQPYF 776
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
LD ++P + K + + V E + P+ S T+ + + D+NDN P F+ V
Sbjct: 403 LDYENPNQRKFLILVVAEEISDVPERSSTATVTVAITDVNDNAPYFENV 451
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI---TTDIR 64
V+ P N G Y ++K RA + + E G + + ++ D + E +I T D+R
Sbjct: 1225 VEVPENAGLADYLVMKV---RANDADEGENGRITYHFKVNETDVQETDEFFIHPDTGDLR 1281
Query: 65 VQA-LDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E + + + ++A+D+G+P + + + D NDN+P F+ +Y
Sbjct: 1282 TKIILDR---EVKSKYELLLVAKDHGSPTWFETLRLLTVLLVDTNDNDPEFESERY 1334
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY-ITVIAEDN 88
KFS++ +TG+V + P Q LD + K IY +T A D+
Sbjct: 501 KFSVNSKTGVVVVAKCENPGKP--------------QCLDYE----TKNIYDLTYKATDD 542
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
S+ +++I+++D NDN P+F+R QY
Sbjct: 543 EGKGQSNQVSLRISLKDDNDNPPVFERSQY 572
>gi|355563775|gb|EHH20337.1| hypothetical protein EGK_03169, partial [Macaca mulatta]
Length = 2846
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 633 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 692
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 693 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 726
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 127 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 176
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 177 ---------------VKDTNDHSPVFEQSEY 192
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 746 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 797
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 798 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 835
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 207 LTIRASDRDSPVNA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 251
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 252 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 298
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D SN + Y I+ G F ID ++GI+ T +LDR E+
Sbjct: 344 LTVRATDQDTGSNA-NVDYSILNPDGTNGAFGIDSKSGIITTRSSLDR-------ELTSF 395
Query: 61 TDIRVQALDR----DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN-DNEPMFDR 115
+ VQA D D + ITV+ E++ PQ S+ ED+N N P R
Sbjct: 396 YALVVQATDSGPVTDRKSASATVQITVLDENDNYPQFSERSYSVKVSEDVNWLNHPEVAR 455
Query: 116 VQ 117
++
Sbjct: 456 IR 457
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
Y L+ D PE + + + + LDR ER + V A+D G P LSD +++ +
Sbjct: 785 YTLEEDVPEFRMDPSSGSLVTARPLDR---ERVGGYTLVVAAQDGGNPPLSDTTNVELEI 841
Query: 104 EDINDNEPMFDRVQY 118
D+NDN P+F Y
Sbjct: 842 ADVNDNTPVFPTAGY 856
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D +N I Y + + ++D TG V T LDR
Sbjct: 559 VRVQAYDADDGANA-EISYTLSSSERPDLPLNVDDVTGWVSTTRQLDR------------ 605
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E V+A D+GTP S ++ + V+D+NDN+P+F+ Y
Sbjct: 606 -------------EESASFNFQVVARDHGTPSRSATASILLRVQDVNDNDPVFEPRTY 650
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D +N ++Y +I + F++D TG V L LD
Sbjct: 455 RIRATDSDQGANAA-LRYSLIGG-NTQGHFAMDSLTGSVTVLSPLDY------------- 499
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + V +D GTP S+ + + V DINDN+P F
Sbjct: 500 ------------ESARSYRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKF 539
>gi|62997558|gb|AAY24693.1| protocadherin 15 isoform C [Mus musculus]
Length = 1363
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 85 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 140
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 141 VVTDVNDNAPVFD 153
>gi|355709479|gb|AES03605.1| protocadherin 18 [Mustela putorius furo]
Length = 169
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +T+IAED GTP LS + + DINDN P F R +Y
Sbjct: 68 DREKRSEYSLTIIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 114
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2406 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2451
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2452 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 2496
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE----IYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1199 FTIDTRNGFIKTLRPFDR-------EALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVS 1251
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1252 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1283
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TGI+ R + +
Sbjct: 1624 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGIITFTPGPQFKQEVRYQLTLKS 1680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-----TPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I +G PQ + +V +NEP+
Sbjct: 1681 TDEAVQS-----ERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVY---ENEPI 1729
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1984 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 2032
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 446 VRVNGVLDREEIGKYN---LTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1513 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1564
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1565 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1601
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I ER FS+D+ TG + LD D
Sbjct: 3249 LTVGATDDDTGPNG-MLRYSI-SGGNERQDFSVDERTGGIVIQQQLDYD----------- 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+F+ +Y
Sbjct: 3296 --------------LIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEY 3339
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2298 LQVSATDVDEGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2343
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2344 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2384
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLVTTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEIYI 59
M + A+D D P NGG Y++I ++ S+D+ +G+V++ + DR+ P E I +
Sbjct: 3671 MTLIASDPDLPRNGGPFTYQLIGGK-HKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEV 3729
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
ED+G P+ + ITV D NDN
Sbjct: 3730 --------------------------EDSGKPKQKSQHLLTITVLDQNDN 3753
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 3092 LTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEY 3129
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 2537 RFHIDSETGEISTATTLDRE----ETSVY---------------------HLTLMAQDSS 2571
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2572 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 2601
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y II + F ID +TG + T LDR+
Sbjct: 3567 VKAIDKDVRTQNNQFSYSIING-NLKQSFKIDVQTGEISTASRLDRE------------- 3612
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 3613 -------------ETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 3651
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + I + D NDN P+FD QY
Sbjct: 2226 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQY 2283
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG-ERA---KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
ATD D +NG ++ + + AP ER +F++D TG + T LDR
Sbjct: 623 ATDHDQGTNG-SVTFAL--APSVERLYPLQFALDALTGQLTTRRPLDR------------ 667
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMF 113
E+ + I+VIA D G P A T+ + V D+NDN+P F
Sbjct: 668 -------------EKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG TI+Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 693 VSATDPDLGLNG-TIKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 741
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 742 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 780
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D+D +N I YRII G ++F+I+ TG + T LDR
Sbjct: 2367 VNASDIDASTNA-VISYRII---GGNSQFTINPSTGQIITSALLDR-------------- 2408
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V+A D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2409 -----------ETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2454
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y +IK ER +F+ID +G
Sbjct: 1212 LRVSASDVDEGSNG-LIHYSVIKGNEER-QFAIDSTSG---------------------- 1247
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+V + R D E + + A D+G L+ CT+ I + D NDN P F
Sbjct: 1248 ---QVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSF 1297
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 589 ATDGDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTISSLDRE----EQAFY------ 637
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 638 ---------------SLLVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQY 676
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3511 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3558 -------------EQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3593
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 946 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 983
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2072 NPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDN 2131
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2132 NPVFAQAMY 2140
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ +++ D + K Y L + + + + ++RV Q
Sbjct: 2247 VNVPENLGTLPRTVLQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQ 2301
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G P L+ T+ + V+DINDN P F Y
Sbjct: 2302 SLDR---ETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMY 2350
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y II E + FSI+ TG ++++ LDR
Sbjct: 2671 LTVSAVDKDSGPNG-QLDYEIINGNKEHS-FSINHATGEIRSIRPLDR------------ 2716
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + + V + D G+P S + + I + D NDN P F ++
Sbjct: 2717 -------------EKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQI 2759
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3409 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3454
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ + +EDINDN PM
Sbjct: 3455 -------------TLPIYNLTVLAVDSGTPSATGSASLLVILEDINDNGPML 3493
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2156 QVFAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------- 2200
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2201 ------------EKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2245
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1106 AIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATD 1165
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1166 QGLPQPLKDQATVHVYMKDINDNAPKF 1192
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1041 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1087
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I++R+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRFRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|195576483|ref|XP_002078105.1| GD22718 [Drosophila simulans]
gi|194190114|gb|EDX03690.1| GD22718 [Drosophila simulans]
Length = 3385
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 950 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 995
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 996 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 1040
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 528 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 576
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TG++ R + +
Sbjct: 168 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGVITFTPGPQFKQEVRYQLTLKS 224
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-----TPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I +G PQ + +V +NEP+
Sbjct: 225 TDEAVQS-----ERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVY---ENEPI 273
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 842 LQVSATDVDEGANG-RIRYSIVMG-DQNHDFSISEDTGVVRVAKNLNY------------ 887
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 888 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 928
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEIYI 59
M + A+D D P NGG Y+++ + S+D+ +G+V++ + DR+ P E I +
Sbjct: 2147 MTLMASDPDLPRNGGPFTYQLVGGK-HKTWLSVDRNSGVVRSTTSFDREMTPVLEALIEV 2205
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
ED+G P+ + ITV D NDN
Sbjct: 2206 --------------------------EDSGKPKQKSQHLLTITVLDQNDN 2229
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 57 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 108
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 109 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 145
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + + FSID TG V + A+ + Y+ +
Sbjct: 1554 QIIATDRDKQGPNSVISYSLQQP---SPMFSIDPATGEVFSKKAV-----RFKHSQYVRS 1605
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ AL TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 1606 PENMYAL-------------TVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQEEY 1649
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 1081 RFHIDSETGEISTATTLDRE----ETPVY---------------------HLTLMAQDSS 1115
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 1116 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 1145
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y II + F ID +TG + T LDR+
Sbjct: 2043 VKAIDKDVRAQNNQFSYSIING-NLKQSFKIDVQTGEISTASRLDRE------------- 2088
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 2089 -------------ETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 2127
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + I + D NDN P+FD QY
Sbjct: 770 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQY 827
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 17 IQYRI--IKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
I+Y + + A G R + F ID + GI+ T LDR+ +E E+ ++ AL
Sbjct: 289 IEYFVTNVTAAGSRGQVDRLFDIDAKLGILSTAAELDREAGPKEYEV----EVYAIALGG 344
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
P ++ +TV+ +++ PQ D + ED+
Sbjct: 345 QPPTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDL 380
>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
Length = 5024
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2284 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2329
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2330 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELHSY 2374
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE----IYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1077 FTIDTRNGFIKTLRPFDR-------EALVKVSRNAEAGGEDGSLRGSMAGNYMLLEATVS 1129
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1130 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1161
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TG+V A P+ ++E+
Sbjct: 1502 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGVVTFTPA-----PQLKQEVRYQ 1553
Query: 61 TDIRVQALDRDDPEREKEIYITVI-----AEDNGTPQLSDACTMKITVEDINDNEPM 112
++ R E+YIT+I A ++ PQ + +V +NEP+
Sbjct: 1554 LTLKATDEAVQSERRSSEVYITIITPGSGASESSVPQFEQRSKLSGSVY---ENEPI 1607
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1862 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 1910
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A+D D P NGG Y++I ++ S+D+ +G+V++ + DR EI
Sbjct: 3549 MTLMASDPDLPRNGGPFTYQLIGGK-HKSWLSVDRNSGVVRSTISFDR-------EITPV 3600
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++ D P+++ + +T+ + + N P S ++ I V N + P
Sbjct: 3601 LEALIEVEDSGKPKQKAQHLVTITVLDQNDNP--STTRSLHIAVSLFNGDLP 3650
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I ER FS+D+ TG + LD D
Sbjct: 3127 LTVGATDDDTGPNG-MLRYSI-SGGNERQDFSVDERTGGIVIQQQLDYD----------- 3173
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+FD+ +Y
Sbjct: 3174 --------------LIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFDQREY 3217
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLVTTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D GTP + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGTPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 440 VRVNGVLDREEIGKYN---LTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 493
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1391 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1442
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1443 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1479
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2176 LQVSATDVDEGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2221
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2222 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2262
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 2415 RFHIDSETGEISTATTLDRE----ETAVY---------------------HLTLMAQDSS 2449
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2450 ITEPRASSVNLTISVSDVNDNIPKFDSTHY 2479
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + + FSID TG V + +K ++
Sbjct: 2912 QIIATDRDKQGPNSVISYSLQQP---SPMFSIDPATGEVFS-----------KKAVHFKH 2957
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V++ E +TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 2958 SQYVRS-------PENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQEEY 3007
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q HATD D P N I Y + + +R FS+++ G + + + D + E+ IY
Sbjct: 3232 FQAHATDKDSPKN-AIIHYAFLPSGPDRHFFSMNQSNGTISSAVSFDYE----ERRIYT- 3285
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQL 93
++++A + D E +Y+ V+ + PQ
Sbjct: 3286 --LQIKAKNPDSSMESYANLYVHVLGVNEFYPQF 3317
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + I + D NDN P+FD QY
Sbjct: 2104 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTETQLLIRILDENDNSPVFDPKQY 2161
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y II + F ID +TG + T LDR+
Sbjct: 3445 VKAIDKDVRAQNNQFSYSIING-NLKHSFKIDVQTGEISTASRLDRE------------- 3490
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 3491 -------------EISTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 3529
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG TI+Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TIKYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y +IK ER +F+ID +G
Sbjct: 1230 LRVSASDVDEGSNG-LIHYSVIKGNEER-QFAIDSTSG---------------------- 1265
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+V + R D E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1266 ---QVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPK 1317
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 607 ATDGDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTISSLDRE----EQAFY------ 655
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 ---------------SLLVLATDMGSPPQSSMVRINVSLLDINDNSPVFYPVQY 694
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D+D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2386 VNASDIDASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2425
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V+A D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -----------ETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSY 1001
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%)
Query: 50 DPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+P K T D V+ D E +TV+A D G P LS + + + V DINDN
Sbjct: 2091 NPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDKGHPSLSSSTEVVVMVLDINDN 2150
Query: 110 EPMFDRVQY 118
P+F + Y
Sbjct: 2151 NPVFAQAMY 2159
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ +++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTVLQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E ++ + + A D+G P L+ T+ + V+DINDN P F Y
Sbjct: 2321 SLDR---ETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMY 2369
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y II E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAVDKDSGPNG-QLDYEIINGNKEHS-FSINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + + V + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKISQYVLIVKSSDRGSPSQSTSVKVIINILDENDNAPRFSQI 2776
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ + +EDINDN PM
Sbjct: 3472 -------------TLPIYNLTVLAVDSGTPSATGSASLLVILEDINDNGPML 3510
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D +NG ++Y I+ + +F ID TG + LDR
Sbjct: 2175 QVFAADGDEGTNG-QVRYGIVDGNANQ-EFRIDSVTGAITVAKPLDR------------- 2219
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 ------------EKTPTYSLTVQATDRGSTPRTDTSTISIVLLDINDFVPIFELSPY 2264
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E DR+ R + + TVIA D
Sbjct: 1124 AIDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTHQFDRESLMRRRGTAVFSFTVIATD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|149043790|gb|EDL97241.1| rCG60633 [Rattus norvegicus]
Length = 1351
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 68 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 123
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 124 VVTDVNDNAPVFD 136
>gi|395508999|ref|XP_003758794.1| PREDICTED: cadherin-23-like, partial [Sarcophilus harrisii]
Length = 3356
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 29/118 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D+D NG + YR+ + P R F ID +G+V T LDR
Sbjct: 912 HVVAIDLDEGLNG-LVTYRMQVGMP--RMDFVIDSSSGVVTTTTELDR------------ 956
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER E ++ V+A D GTP S T+ I V D+ND P F Y
Sbjct: 957 -------------ERIAEYFLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFSAVY 1001
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N Y I E F +D+ TG + T R P
Sbjct: 1549 VQVVATDRDSGINSVLSYY--ITGGNEDMTFRMDRVTGEIAT-----RPSPP-------- 1593
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ ++ V ED GTP LS + +TV D NDN PMF + +Y
Sbjct: 1594 -----------DRERQSFYHLVVTVEDEGTPTLSATTHVYVTVVDENDNAPMFQQPRY 1640
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG ++Y +K G R F+ID +G+++T LDR
Sbjct: 2635 EVYATDKDEGLNGA-VRYSFLKTAGNRDWEYFTIDPISGLIQTAKRLDR----------- 2682
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDR 115
E++ + ++A D G P + +++ ++DI+DNEP+F R
Sbjct: 2683 --------------EQQAVYSLILVASDLGQPVPYETMQPLQVALDDIDDNEPIFMR 2725
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +GG + YRI+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1232 VRATDRDT-GDGGLVIYRILS--GSEGKFEIDESTGLIITIDYLDYE----TKTSYL--- 1281
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +YIT++ E + Q S+A +E++
Sbjct: 1282 MNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAIMENL 1327
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + Y I + PG A F IDK++G+V T L
Sbjct: 2530 ITMMATDQDEGENG-ELTYSI-EGPGVEA-FQIDKDSGLVATGRPL-------------- 2572
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
Q+ +R + +TV+A D G P L + + V D+NDN P+F R
Sbjct: 2573 -----QSYERFN--------LTVVATDGGQPPLWGTTMLYVEVIDVNDNRPVFVR 2614
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + YRI G + +F+I TG+
Sbjct: 2090 LQVTATDEDSGLNGELV-YRI--EAGAQDRFTIHPVTGL--------------------- 2125
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IRV L D E+E + V+A D GT LS + + ++D+ND+ P F
Sbjct: 2126 --IRVGNLTIDREEQES-YRLVVVAADRGTAPLSGTAIVTVLIDDVNDSCPEF 2175
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IY+TV+A+D G P L+ + I V D NDN P F + Y
Sbjct: 638 IYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSY 677
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 31/116 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRI--IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A +D N I YR +P RA F ID TG++ +DR+
Sbjct: 1334 VRVQAFSID---NINPIVYRFDPYTSPQARALFKIDSVTGVITVKGLVDRE--------- 1381
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ + Y + D+G P++ + ITV D NDN P FD
Sbjct: 1382 -----------------KGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPQFD 1420
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV A DNG+P + + + + DINDN P+FD+ Y
Sbjct: 2362 DYEEVHWVNFTVQAADNGSPPRAAEIPVYLEIVDINDNNPIFDQPSY 2408
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D GTP LS + I V DINDN+P+
Sbjct: 1820 LTICARDRGTPPLSSMMLVGIRVLDINDNDPVL 1852
>gi|148699993|gb|EDL31940.1| protocadherin 15 [Mus musculus]
Length = 1849
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 561 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 616
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 617 VVTDVNDNAPVFD 629
>gi|402872873|ref|XP_003900320.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-12 [Papio
anubis]
Length = 1811
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P+ K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPKNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ ++ ++ D G P+L+ + ++ITV D+NDN P FD+ Y
Sbjct: 1071 DREQTPKLNFLLMVIDGGKPELTGSVQIQITVLDVNDNGPAFDKPSY 1117
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD + E + Y
Sbjct: 262 IKLNATDRDEGVNGELTYSLMSIKPNGRPLFTLDQNNGEVRVNGILDYE----ENKFY-- 315
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+I VQA D+ GTP ++ CT+ + + D NDN P
Sbjct: 316 -NIEVQATDK------------------GTPPMAGHCTVWVEILDTNDNSP 347
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 1282 ALDR---ESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEY 1330
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 411 ALDR---ESVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
>gi|395542667|ref|XP_003773247.1| PREDICTED: protocadherin-18 isoform 2 [Sarcophilus harrisii]
Length = 1134
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + D+NDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDVNDNPPHFQRSRY 470
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P+F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPVFEKQSY 251
>gi|395542665|ref|XP_003773246.1| PREDICTED: protocadherin-18 isoform 1 [Sarcophilus harrisii]
Length = 1135
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + D+NDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDVNDNPPHFQRSRY 470
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P+F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPVFEKQSY 251
>gi|395501475|ref|XP_003755120.1| PREDICTED: protocadherin-15 [Sarcophilus harrisii]
Length = 1782
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 633 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 688
Query: 102 TVEDINDNEPMFD 114
V D+NDN P FD
Sbjct: 689 VVTDVNDNAPTFD 701
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATDVD G + YRI ++P + F++ TG + L +LD +
Sbjct: 822 LQIEATDVD---LGANVSYRI-RSPEVKHLFALHPFTGELSLLKSLDYES---------- 867
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
PE E I V A D G T+ + V+D+ND P+F + Y
Sbjct: 868 -----------FPENEAYITFLVEAFDIGGTMPPGIATVTVIVKDMNDYPPVFSKRLY 914
>gi|358333643|dbj|GAA37461.2| protocadherin-11 X-linked, partial [Clonorchis sinensis]
Length = 1861
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 24/108 (22%)
Query: 5 ATDVDPPSNGG-TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D NG T + + + KF +D TG+++ ALD EIY
Sbjct: 273 ATDADSGDNGRITYAFSPLTSAEATRKFVVDSVTGVIRVRTALDY-------EIY----- 320
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ + ++A+D G+PQ S + T+ +TV D+NDN P
Sbjct: 321 -----------SERHFVLPILAKDAGSPQRSSSMTVYVTVRDVNDNIP 357
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG---ERAKFSIDKE-TGIVKTLYALDRDDPEREKEIYIT 60
A D D NG ++YR+I++P + K S+D T V A P +I+I+
Sbjct: 136 AIDRDSRLNG-IVEYRLIQSPSLSDPQIKPSLDVSVTNTVSQQVAAPL--PLEIDDIHIS 192
Query: 61 TD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
T + V+ LD ++ ++EI+ ++A D G PQL+ + ++ + + DINDN P+F
Sbjct: 193 TPRLVHVRPLDYENLA-DREIHAVLLAIDGGNPQLTGSLSIIVHLLDINDNAPVF 246
>gi|85725319|gb|ABC79277.1| protocadherin-15-CD3 isoform 2 [Mus musculus]
Length = 1677
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|334331199|ref|XP_001378005.2| PREDICTED: protocadherin-18 [Monodelphis domestica]
Length = 1134
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + D+NDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDVNDNPPHFQRSRY 470
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P+F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPVFEKQSY 251
>gi|218505773|ref|NP_001136232.1| protocadherin-15 isoform CD3-2 precursor [Mus musculus]
Length = 1677
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 30/120 (25%)
Query: 3 VHATDVDPPSNGGTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
V ATD D N I Y + I G FSI+++TG + T LDR
Sbjct: 913 VSATDSDVGINA-QITYSLNEESINGLGTADPFSINQQTGAIVTNAPLDR---------- 961
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A+D G P LSD ++I+V D+NDN PMF Y
Sbjct: 962 ---------------ETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPMFKNPLY 1006
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG I+Y + E F ID +G ++T LDR+ IY
Sbjct: 1021 IQVSASDPDIGLNG-RIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRE----SVAIY-- 1073
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++T IA D G+P LS ++I +ED+ND+ P F
Sbjct: 1074 -------------------HLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTF 1107
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 52 EREKEIYITTDIR---VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
ER+ + D R VQ + + D E + V+A+D G P S + ++ ITV+D+ND
Sbjct: 724 ERDDNFPLAVDPRTGWVQTIKQLDREEQSRFTFQVVAKDGGVPPKSASSSVVITVQDVND 783
Query: 109 NEPMFDRVQY 118
N+P F+ Y
Sbjct: 784 NDPNFNPKYY 793
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++FSID +G V + LD
Sbjct: 599 HIRATDADQ-GNNAAIRYAIIGG-NTQSQFSIDSMSGDVSLVKPLDY------------- 643
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S+ + + V D NDN P F Q+
Sbjct: 644 ------------ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF 688
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F +D TG+V T +LDR+ D+ Y V+A D+
Sbjct: 401 FKVDSRTGVVTTSASLDRE----------LMDVH---------------YFRVVATDDSF 435
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P S T+++ V D ND+ P F+ Q+
Sbjct: 436 PPRSGTTTLQVNVLDCNDHSPTFEAEQF 463
>gi|85725317|gb|ABC79276.1| protocadherin-15-CD3 isoform 1 [Mus musculus]
Length = 1682
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|218505743|ref|NP_001136218.1| protocadherin-15 isoform CD3-1 precursor [Mus musculus]
Length = 1682
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|41152522|ref|NP_955780.1| protocadherin alpha-12 precursor [Rattus norvegicus]
gi|40645538|dbj|BAD06376.1| cadherin-related neuronal receptor 11 [Rattus norvegicus]
gi|50512320|gb|AAT77555.1| protocadherin alpha 11 [Rattus norvegicus]
Length = 947
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E+++ V A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 202 DRERDSELHLVVKATDGGKPELTGTLELHITVLDANDNAPAFDRAIY 248
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + + V A D G+P L D ++ + V D+NDN P F + +Y
Sbjct: 413 ALDR---ETTADFKVVVTARDRGSPSLWDTASVSVEVADVNDNAPAFAQPEY 461
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD+D NG I+Y + E F +D +G+++T LDR+ IY
Sbjct: 1030 VQIAATDIDMGLNG-RIKYTLSSKDIEDGSFVVDPTSGVIRTNKGLDRE----SIAIY-- 1082
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ IA D GTP LS ++I ++D+ND+ P F
Sbjct: 1083 -------------------HLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTF 1116
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 30/115 (26%)
Query: 3 VHATDVDPPSNGGTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
V ATD D N I Y + + G FSI+ +TG + T LDR
Sbjct: 922 VFATDSDVGVNA-QITYLLNDESVNGLGSNEPFSINPQTGAIITNAPLDR---------- 970
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV A+D G P LSD ++I+V D+NDN P F
Sbjct: 971 ---------------ETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQF 1010
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D +N I Y I + + ++D TG + T LDR++ R
Sbjct: 712 VRVQAYDSDEGANS-EISYNI-QDRDDNLPLAVDSRTGWIHTTKPLDREERSRYS----- 764
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VIA D G P S + ++ +T++D+NDN+P F Y
Sbjct: 765 --------------------FQVIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYY 802
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++FSID +G V + LD
Sbjct: 608 HIQATDADQ-GNNAAIRYAIIGG-NTQSQFSIDSMSGDVSLVKPLDY------------- 652
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S+ + + V D NDN P F Q+
Sbjct: 653 ------------ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQF 697
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ F +D TGIV T +LDR+ D+ Y VIA D
Sbjct: 408 QSMFKVDSRTGIVTTAASLDRE----------LMDVH---------------YFRVIATD 442
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ P S T+++ V D ND+ P F+ ++
Sbjct: 443 DSFPPRSGTTTLQVNVLDCNDHTPSFESEEF 473
>gi|241735363|ref|XP_002413931.1| Gb2-cadherin, putative [Ixodes scapularis]
gi|215507785|gb|EEC17239.1| Gb2-cadherin, putative [Ixodes scapularis]
Length = 1518
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKT-LYALDRD-DPE 52
M + ATD D P+ G +I+ + GE F+ID+ETG++ T + LDR+ +PE
Sbjct: 236 MTMTATDYDDPNEGNNARLTYSIEQNQVNENGELI-FTIDEETGVISTAVCCLDRETNPE 294
Query: 53 REKEIYITTDIRVQA----------LDRDDPEREKEIYITVIAEDNGT----PQLSDACT 98
++ ++ LD +D ++ IT+ DNG P +D
Sbjct: 295 YTIKVVAVDGGGLKGESCCHVLNLPLDYEDLQQRFGFNITIQVSDNGGESTDPYHADYAK 354
Query: 99 MKITVEDINDNEPMFDR 115
+K+ V+DINDN+P F+R
Sbjct: 355 VKVRVKDINDNKPEFER 371
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE---RAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+QV ATD D + + + E +KF+I+ TG EI
Sbjct: 123 LQVTATDGDKDRESLIVYFLTGQGVDEDLGNSKFAINTTTG-----------------EI 165
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
Y+ ++ LDRD P + TV AED G L + + ++D+NDN P F
Sbjct: 166 YV-----LKPLDRDLPHGRSQWRFTVFAEDEGGNGLVGFADVLVNLKDVNDNAPFFPSAI 220
Query: 118 Y 118
Y
Sbjct: 221 Y 221
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 36 ETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVIAEDNGTPQL 93
+ G + Y +DR D +R+ +I + +Q LDR+D R + + ++A D+G P
Sbjct: 398 QGGKSRVSYMIDRSSDKKRQFKINPNGVVEIQRTLDREDIPRHQ---VKILAIDDGVPSR 454
Query: 94 SDACTMKITVEDINDNEPMF 113
+ T+ + V DINDN P F
Sbjct: 455 TATATLTVVVSDINDNPPRF 474
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
V++ + D E +KE + ++ +DNG P L+ T+ + + DINDN
Sbjct: 543 VRSRETFDRETQKEYLVPILIKDNGNPSLTGTSTLTVIIGDINDN 587
>gi|156717266|ref|NP_001096175.1| protocadherin 1 [Xenopus (Silurana) tropicalis]
gi|134026144|gb|AAI35900.1| pcdh1 protein [Xenopus (Silurana) tropicalis]
Length = 1047
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D N + Y I+ P R FSI+ ++G ++ LDR+
Sbjct: 534 MEVSATDADSGPNS-QLHYSILPDPSARGIFSINPDSGQIRVNTVLDRE----------- 581
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++E Y V+A D G P L ++ ITV D NDN+P F
Sbjct: 582 ---------------QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKF 620
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E KE I ++A D+G P LS ++K+ V D+NDN P+F +
Sbjct: 473 DYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQ 516
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG + Y +I P + F + A D+D E++ ++ I
Sbjct: 200 ATDRDSGVNGVS-SYELIVGPEAQDLFGLQ---------VAEDQD--EKQPQL-----IV 242
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR E+ +T+ +D GTP + + ++I++ D NDN P F+++ Y
Sbjct: 243 MGMLDR---EQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAY 293
>gi|47210012|emb|CAF94493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
RDD K + + D + LDR E E+ +++ ++A D G PQ S ++ITV D N
Sbjct: 177 RDDTSGSKNVELVLD---KELDR---ETEQNVHLVMVAVDGGNPQRSGTAAIQITVLDAN 230
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 231 DNAPVFEQAVY 241
>gi|377833047|ref|XP_003689295.1| PREDICTED: protocadherin-15-like [Mus musculus]
Length = 1696
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 568 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 623
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 624 VVTDVNDNAPVFD 636
>gi|218505724|ref|NP_001136210.1| protocadherin-15 isoform CD1-8 precursor [Mus musculus]
Length = 1896
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 613 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 668
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 669 VVTDVNDNAPVFD 681
>gi|85725303|gb|ABC79269.1| protocadherin-15-CD2 isoform 2 [Mus musculus]
Length = 1518
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD+D NG I+Y + E F +D +G+++T LDR+ IY
Sbjct: 1030 VQIAATDIDMGLNG-RIKYTLSSKDIEDGSFVVDPTSGVIRTNKGLDRE----SIAIY-- 1082
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ IA D GTP LS ++I ++D+ND+ P F
Sbjct: 1083 -------------------HLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTF 1116
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 30/115 (26%)
Query: 3 VHATDVDPPSNGGTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
V ATD D N I Y + + G FSI+ +TG + T LDR
Sbjct: 922 VFATDSDVGVNA-QITYLLNDESVNGLGSNEPFSINPQTGAIITNAPLDR---------- 970
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV A+D G P LSD ++I+V D+NDN P F
Sbjct: 971 ---------------ETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQF 1010
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D +N I Y I + + ++D TG + T LDR++ R
Sbjct: 712 VRVQAYDSDEGANS-EISYNI-QDRDDNLPLAVDSRTGWIHTTKPLDREERSRYS----- 764
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
VIA D G P S + ++ +T++D+NDN+P F Y
Sbjct: 765 --------------------FQVIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYY 802
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++FSID +G V + LD
Sbjct: 608 HIQATDADQ-GNNAAIRYAIIGG-NTQSQFSIDSMSGDVSLVKPLDY------------- 652
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S+ + + V D NDN P F Q+
Sbjct: 653 ------------ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQF 697
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
++ F +D TGIV T +LDR+ D+ Y VIA D
Sbjct: 408 QSMFKVDSRTGIVTTAASLDRE----------LMDVH---------------YFRVIATD 442
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ P S T+++ V D ND+ P F+ ++
Sbjct: 443 DSFPPRSGTTTLQVNVLDCNDHTPSFESEEF 473
>gi|218505729|ref|NP_001136212.1| protocadherin-15 isoform CD1-7 precursor [Mus musculus]
Length = 1933
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|218505715|ref|NP_001136207.1| protocadherin-15 isoform CD1-2 precursor [Mus musculus]
Length = 1938
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|218505737|ref|NP_001136215.1| protocadherin-15 isoform CD2-2 precursor [Mus musculus]
Length = 1518
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|405778352|ref|NP_001258306.1| protocadherin-15 precursor [Rattus norvegicus]
Length = 1791
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|196004380|ref|XP_002112057.1| hypothetical protein TRIADDRAFT_84 [Trichoplax adhaerens]
gi|190585956|gb|EDV26024.1| hypothetical protein TRIADDRAFT_84, partial [Trichoplax adhaerens]
Length = 2004
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 25/104 (24%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G I Y I+ A F+I+ TGIV+T LD E
Sbjct: 40 GQITYSILSATPYFGYFTIESNTGIVRTTRILDY-------------------------E 74
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++T+ A D GTP S C + + D++DN P F++V Y
Sbjct: 75 FTTQYWLTIQARDGGTPSRSTICRTIVQIVDVDDNTPQFEQVVY 118
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 28/115 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRI--IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q++ATD D N G I Y I +P + F+ID +T +++T +LD
Sbjct: 339 IQMNATDPDH-GNNGQITYSIDSFGSPQSNSYFAIDPKTAVIRTRRSLDY---------- 387
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+++ IT+ A D GTP +++ V+D NDN+P F
Sbjct: 388 ---------------EQQRHHSITIRAVDGGTPSRQSLARVQVAVDDRNDNKPQF 427
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D S G I Y ++ + F+ID +TG + T DR ER+ IT
Sbjct: 1060 LTVTASDDDEGS-FGLISYSLVLDANQPKHFNIDAKTGAITTNREFDR---ERQSLYSIT 1115
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D + E+ +S CT + V DINDN P F+ QY
Sbjct: 1116 ----VRATDGGNNSSLSEV-------------MSGFCTFNVRVTDINDNSPSFEFKQY 1156
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 28/119 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D D S+ I + P R KF I+ TG ++T DR+ R
Sbjct: 1388 QIKAIDRDGNSSTLIIYSLVEDIPASRGKFLINARTGQIRTAVVFDRESSLR-------- 1439
Query: 62 DIRVQALDRDDPEREKEIYITVI--AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y TVI A DNG P S ++++ + D+ND+ P F Y
Sbjct: 1440 ------------------YYTVIVKATDNGKPPQSSTSSVRVQILDVNDSPPRFAEQYY 1480
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 23/107 (21%)
Query: 30 KFS----IDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP------------ 73
KFS I ++T I TL+ + DP++ +T +R Q + DP
Sbjct: 1578 KFSYTARIKEDTPIGTTLFNIYATDPDKTVGNLLTYSLRGQGITDVDPPLFIVEQTGVVK 1637
Query: 74 -----ERE-KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE K++Y + +A DNG PQLS ++ ++D+ND P F
Sbjct: 1638 TNARLDRETKDVYEFSCVATDNGEPQLSSFADCRVYLDDVNDERPYF 1684
>gi|85725297|gb|ABC79266.1| protocadherin-15-CD1 isoform 7 [Mus musculus]
Length = 1933
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|85725282|gb|ABC79259.1| protocadherin-15-CD1 isoform 2 [Mus musculus]
Length = 1938
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|218505747|ref|NP_001136220.1| protocadherin-15 isoform SI-2 precursor [Mus musculus]
gi|85725325|gb|ABC79280.1| protocadherin-15-secreted isoform 2 [Mus musculus]
Length = 1171
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|341941234|sp|Q99PJ1.2|PCD15_MOUSE RecName: Full=Protocadherin-15; Flags: Precursor
Length = 1943
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|218505717|ref|NP_001136208.1| protocadherin-15 isoform CD1-4 precursor [Mus musculus]
Length = 1936
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|111074522|ref|NP_075604.2| protocadherin-15 isoform CD1-1 precursor [Mus musculus]
gi|225000578|gb|AAI72646.1| Protocadherin 15 [synthetic construct]
Length = 1943
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|85725287|gb|ABC79261.1| protocadherin-15-CD1 isoform 4 [Mus musculus]
Length = 1936
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
>gi|85725293|gb|ABC79264.1| protocadherin-15-CD1 isoform 8 [Mus musculus]
Length = 1896
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 613 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 668
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 669 VVTDVNDNAPVFD 681
>gi|85725295|gb|ABC79265.1| protocadherin-15-CD1 isoform 9 [Mus musculus]
Length = 1916
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|218505745|ref|NP_001136219.1| protocadherin-15 isoform SI-1 precursor [Mus musculus]
gi|74226398|dbj|BAE23903.1| unnamed protein product [Mus musculus]
gi|85725323|gb|ABC79279.1| protocadherin-15-secreted isoform 1 [Mus musculus]
Length = 1176
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|12483917|gb|AAG53891.1|AF281899_1 protocadherin [Mus musculus]
Length = 1943
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
>gi|410056082|ref|XP_003953964.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Pan troglodytes]
Length = 2852
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 793 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 852
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 853 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 886
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 287 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 336
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 337 ---------------VKDTNDHSPVFEQSEY 352
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 906 LQVSATDRDSGPNG-RLLYTFQGGDSGDGDFYIEPTSGVIRTQRRLDREN-------VAM 957
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 958 YNLWALAVDRGSP----------------TP-LSTSVEIQVTILDINDNAPMFEK 995
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 367 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 411
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G LS T+ I VED NDN P F Y
Sbjct: 412 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 458
>gi|397482525|ref|XP_003812473.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Pan
paniscus]
Length = 2821
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 659 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 718
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 719 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 752
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 153 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 202
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 203 ---------------VKDTNDHSPVFEQSEY 218
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 772 LQVSATDRDSGPNG-RLLYTFQGGDSGDGDFYIEPTSGVIRTQRRLDREN-------VAV 823
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 824 YNLWALAVDRGSP----------------TP-LSTSVEIQVTILDINDNAPMFEK 861
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 233 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 277
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G LS T+ I VED NDN P F Y
Sbjct: 278 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 324
>gi|308481962|ref|XP_003103185.1| CRE-CDH-3 protein [Caenorhabditis remanei]
gi|308260290|gb|EFP04243.1| CRE-CDH-3 protein [Caenorhabditis remanei]
Length = 3351
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 31/117 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++HATD D NG I+ GE ++F +D TG ++ L LD E+ + I
Sbjct: 658 RLHATDQDSGVNG------IVTYSGESSEFFVDTATGEIRNLKELD---AEKRQNYSIPY 708
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R D GTP S CT+ I ++D+NDN P F Y
Sbjct: 709 EVR----------------------DLGTPSKSINCTVAILIDDVNDNAPEFSSKYY 743
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 30/115 (26%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D+D NG + Y ++ G + F+++ TG + +L LDR+
Sbjct: 1668 AEDLDEGQNG-VVTYSLLS--GNTSLFAVNSTTGDIISLAPLDRE--------------- 1709
Query: 65 VQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E+Y +I A+D G P LS + I VED+NDN P F Y
Sbjct: 1710 -----------ESELYELLIEAKDAGFPSLSATSKILIHVEDVNDNAPEFQLPSY 1753
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 65 VQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V LDR+ ++E+Y + + A DNG P+LS +C + I + D NDN P F
Sbjct: 182 VGKLDRE----QRELYSMRLTATDNGRPELSASCILNIIILDTNDNPPDF 227
>gi|218505731|ref|NP_001136213.1| protocadherin-15 isoform CD1-10 precursor [Mus musculus]
Length = 1913
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|198430891|ref|XP_002125453.1| PREDICTED: similar to protocadherin [Ciona intestinalis]
Length = 1178
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
V+ LDR E + E + VIA D G P CT+K+TV D+NDN P+F
Sbjct: 557 VRPLDR---EGQSEWEVRVIARDGGNPYRESFCTLKVTVSDVNDNRPLF 602
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + ++T+ A D+G P LS+ T++I V D ND+ P+F
Sbjct: 218 DYETKSVYHLTLHATDHGKPALSNQVTVRIMVTDSNDHSPVF 259
>gi|327270381|ref|XP_003219968.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 825
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E IT+ A D GTP LS T+ + + DINDN P+FD++ Y
Sbjct: 412 DRESTPEYNITITATDKGTPPLSAEKTISLKISDINDNSPVFDKLSY 458
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E+ ++T++A D G P + + ITV D+NDN P+F + Y
Sbjct: 202 DHETERSFHLTLMALDGGKPPKTGTAKIWITVIDVNDNSPVFSQELY 248
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +E + V A+D G+P LS T+KI + D ND P
Sbjct: 522 DYEQSREFQVEVRAQDGGSPPLSSTATVKIFILDQNDKSP 561
>gi|218505727|ref|NP_001136211.1| protocadherin-15 isoform CD1-9 precursor [Mus musculus]
Length = 1916
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|358332769|dbj|GAA37593.2| protocadherin-11 Y-linked [Clonorchis sinensis]
Length = 730
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++A+D D NG I Y + P E F+ID+++GI++T LDR
Sbjct: 464 LQLNASDKDVGENG-KICYSLPLEPEEDGLFTIDQDSGIIRTTGKLDR------------ 510
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E I + +A D+G P+ S + + +TV D ND P F+ Y
Sbjct: 511 -------------ELNSTITLIAMATDSGEPKRSASLKIHLTVLDYNDQTPQFEHSVY 555
>gi|85725301|gb|ABC79268.1| protocadherin-15-CD2 isoform 1 [Mus musculus]
Length = 1790
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|363738906|ref|XP_003642093.1| PREDICTED: protocadherin gamma-B1-like [Gallus gallus]
Length = 917
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR ER E +TVIA D G+P LS + + V D+NDN P+F+ Y
Sbjct: 541 ALDR---ERASEHRVTVIATDRGSPALSSRADLVLEVSDVNDNAPVFEEAAY 589
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D ER +E + V A D GTP S T+++ V D NDN P
Sbjct: 649 DYERCREFSVEVRARDGGTPARSATATVRVFVLDRNDNAP 688
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D SNG + Y P R+ FSID E+G V+T LD + ER K +
Sbjct: 394 LQVRAADADAGSNG-RVSYFFGNVPESVRSLFSIDAESGEVRTAGPLDFE--ERSKYSF- 449
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLS 94
++ D E+ I +I E++ P+++
Sbjct: 450 ----GLEGRDGGGLTGHCEVQIDIIDENDNAPEIT 480
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E++ + + A D G S + +++ V D NDN P+F++ Y
Sbjct: 330 RALDR---EKQSSFQMVLTATDGGDSAKSGSVHIRVNVSDANDNAPVFNKNAY 379
>gi|345328637|ref|XP_001507029.2| PREDICTED: protocadherin alpha-C1-like [Ornithorhynchus anatinus]
Length = 891
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
D ER E +I V+A D G+P LS + T+ I V D+NDN P F R Q
Sbjct: 422 DRERVSEYHIPVMASDGGSPPLSSSGTVTILVADVNDNAPSFSRPQ 467
>gi|301607896|ref|XP_002933536.1| PREDICTED: protocadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 3303
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + + +A D+G+P LS +CT+ ITVED NDN+P+F
Sbjct: 560 DHESAPVLNLVAVATDHGSPPLSSSCTITITVEDTNDNDPIF 601
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 38 GIVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDPEREKEIYITV 83
G++ ++ A DRD + Y I +LDR ER+ + V
Sbjct: 1144 GVIGSIQAFDRDSGNNGQLSYFLLSEGNNFLISSKTGEIINCASLDR---ERKAHHELNV 1200
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
+ DNGTP+ + T+ I V D+NDN+P F ++
Sbjct: 1201 LVTDNGTPRRNATTTVYIIVADLNDNKPYFPQL 1233
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 34 DKETGIVKTLYALDRDDPEREKEIYITTD----------------IRVQALDRDDPEREK 77
+++ GI+ T+ A D+D + + TD + LDR+D
Sbjct: 1776 NQDLGIIHTVLAADKDAGNNGRLHFQITDGNMGGYFAINNTSGQLWATRTLDRED---FS 1832
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ITV D GTP S ++ITV D NDN P F + QY
Sbjct: 1833 SFTITVECHDLGTPHRSTIAKLRITVLDENDNPPTFPKSQY 1873
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG I Y II E F +D GI+ T LDR EI +
Sbjct: 2197 IQVFAADGDSGING-QIDYSIISG-NENNAFVLDSRHGILSTNVILDR-------EIKSS 2247
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ VQA DR G+P S + + + DINDN P
Sbjct: 2248 YRLTVQATDR------------------GSPSCSSTSVVTVLILDINDNAP 2280
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ EI I ++A DNG+P L+ + +T+ D+N+ P F
Sbjct: 2448 KSTEIQILIVAMDNGSPPLTSTAMLSVTILDVNNYAPTF 2486
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 15 GTIQYRII-KAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
G++ +RI+ K P G K + G + ++ LD E ++T +
Sbjct: 1570 GSLVHRIVAKDPDEGRNGKIGFHIKEGNAQQVFLLD------ETTGWLTLHSEI------ 1617
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +T++A D+G P LS T+ I++ D+ND P F + Y
Sbjct: 1618 DREVQDHYILTILALDDGIPSLSVTQTLTISLIDVNDKTPTFTQGLY 1664
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +Q LDR++ + + + V A D G P+ + + I V D NDN P+FD++ Y
Sbjct: 219 VLIQWLDREELDNYQ---LEVEAFDGGNPRRTGRLIVDIVVMDANDNPPVFDQLDY 271
>gi|85725299|gb|ABC79267.1| protocadherin-15-CD1 isoform 10 [Mus musculus]
Length = 1913
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 628 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 683
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 684 VVTDVNDNAPVFD 696
>gi|15706330|dbj|BAB68353.1| protocadherin [Ciona savignyi]
Length = 1177
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 28/103 (27%)
Query: 11 PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
PS G + Y I + FSI+ ETG + + LDR
Sbjct: 527 PSMNGKVTYLI---DSDDNTFSINAETGEITLVRPLDR---------------------- 561
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + + +T+IA D G+P C +K+ V D+NDN P+F
Sbjct: 562 ---EGQSDWEVTIIARDGGSPYKESTCILKVVVSDVNDNRPLF 601
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ ++T+ A DNGTP LS+ ++I V D ND+ P+F + ++
Sbjct: 216 DYETKQVHHLTLYATDNGTPPLSNNVALRILVTDANDHSPVFAQSEF 262
>gi|443704241|gb|ELU01386.1| hypothetical protein CAPTEDRAFT_181060 [Capitella teleta]
Length = 2711
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDK-ETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D NG + Y I A F ID ETGIVKT LDR EI T
Sbjct: 1576 QVIATDLDTGENG-RVTYSITSGNTHNA-FVIDPPETGIVKTNIILDR-------EIVST 1626
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++A+D G LS CT+K+ + D+NDN P F
Sbjct: 1627 YRLEIEAID------------------GGRNPLSAICTLKVQIIDVNDNSPFF 1661
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E V+A DNG P S + ++ + V D NDN+P+F + Y
Sbjct: 463 DRERRHEYSFVVLAVDNGVPSRSSSASVTVRVLDANDNDPIFQNIPY 509
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 20/101 (19%)
Query: 35 KETGIVKTLYALDRDDPEREKEIY---ITTDIR--------------VQALDRDDPEREK 77
K + TL A D DD K IY ++ D+ V LDR ER
Sbjct: 1878 KAGSTLLTLTATDDDDLHVNKVIYYSIVSGDVESVFQVMGSTGEIVLVGVLDR---ERRS 1934
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + V+ D G P L+ + IT+ DINDN P+F+ Y
Sbjct: 1935 KYNLVVMGSDRGEPPLNSTAPVTITILDINDNTPVFNSSVY 1975
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D +GG + + I+ + + FS+D TG+++ LDR
Sbjct: 950 MHIVATDADS-QDGGRVSFDIVSG-NDHSHFSLDSSTGLLQIAKPLDR------------ 995
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A D+G P+ + + + V D+ND+ P+F Y
Sbjct: 996 -------------EAVAQYLLNISAYDHGLPRRTTYMKLTVGVIDVNDSPPVFQHSVY 1040
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ Q LDR+ E++++ +T+I D G P + + +KI V D+NDN P FD+
Sbjct: 558 LSSQQLDRE----ERDLHSLTIIVSDQGQPSRTSSVDVKIHVTDVNDNNPRFDK 607
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 29/113 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+ATD D N + Y +I G F ID TG++ T + + +
Sbjct: 1781 LTVNATDSDSDDNA-RLTYSMIAVDG----FKIDSITGVIYTNHTVMFN----------- 1824
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R++++++ V A D+G PQ S +++ V D+N++ P F
Sbjct: 1825 -------------PRQRDMHLVVTAVDHGKPQRSAVAAVRVQVMDVNNHAPKF 1864
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 25/84 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+I++ TG++++ DR E++ IT +D
Sbjct: 1082 QFTIEQSTGVIRSRIGFDR-------------------------EQQSSYVITAYVKDGA 1116
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
P L D T+ + V D NDN P+F
Sbjct: 1117 FPALYDTATVLVDVLDENDNAPIF 1140
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 72 DPEREKEIYITVIAED---NGTPQLSDACTMKITVEDINDNEPMF 113
D E K+I I V AED N + +L+ + I +ED+NDN P+F
Sbjct: 887 DFEETKQISIVVKAEDLAKNVSGRLATTVSALIIIEDVNDNSPLF 931
>gi|403295646|ref|XP_003938746.1| PREDICTED: protocadherin-11 X-linked [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG AP E F +D+ TG++ + LDR
Sbjct: 487 KVSATDADSGPNGEISFLLGSDAPPE---FELDRRTGMLSAVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L+ ++ + V D NDN P+F +Y
Sbjct: 531 ------------EKQEKYLFTVLAKDNGVPPLTSNVSVFVNVIDQNDNSPIFTHNEY 575
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ I ED G+PQ S ++++V D+NDN P+F
Sbjct: 207 LDRE----EKDTYVMKIKVEDGGSPQRSSTAILQVSVTDVNDNHPVF 249
>gi|262263245|tpg|DAA06622.1| TPA_inf: protocadherin gamma b20 isoform [Anolis carolinensis]
Length = 942
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E IT+IA D GTP LS T+ + + DINDN P F+ Y
Sbjct: 415 DRERKPEYNITIIATDKGTPPLSSNKTIYLQISDINDNSPAFEEKAY 461
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG ++Y + FSI+ TG++ LD
Sbjct: 603 QVAATDADDSSNGD-VRYAL---SDNTDVFSINTSTGLITLKTQLDY------------- 645
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + +TV A+D GTP S +K+ V+D+NDN P F + Y
Sbjct: 646 ------------EKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLY 690
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D +NG + + IIK + F+ID TGI+ + D ++ R
Sbjct: 394 QVSATDRDSSTNGALV-FGIIKG-NDDGVFTIDGSTGIISIAKSPDYENKTRY------- 444
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ VQA DR G P D + I +ED+ND+ P+F Y
Sbjct: 445 DLTVQARDR------------------GVPVKYDTAQVTIFIEDVNDHSPVFSPSNY 483
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y + + G+ +KF ++ TG+V T LDR+D
Sbjct: 1120 KVTATDRDEGENA-KVTYEL--SVGDTSKFEVNPATGLVTTKRPLDRED----------- 1165
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + V A D+G P S + +T+ D+NDN P F + +Y
Sbjct: 1166 --------------QASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKY 1208
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D+D N + Y ++ G+ + F++D + G+++T A DR
Sbjct: 189 QLTAVDLDVGINA-RLSYSLVS--GDTSYFTVDSQ-GVIRTKGAFDR------------- 231
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S T++I + D+NDN P+F QY
Sbjct: 232 ------------ETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQY 276
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D NG + Y II + F +D +GI+ LDR
Sbjct: 810 QLTATDRDIGPNGA-VTYAIISG-NQGNSFQLDPRSGILSVRSTLDR------------- 854
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D G+PQ S ++ ++V D+NDN P F++ +
Sbjct: 855 ------------ETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLF 899
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D + G++ Y I+ + KFSID+ +GI+ T LDR
Sbjct: 1534 VKVSASDRD---SFGSLSYSIVGGK-DSDKFSIDQRSGIISTADVLDR------------ 1577
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E I V D G P LS+ + I + D NDN P FD
Sbjct: 1578 -------------ELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFD 1618
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG I Y I+ E F++D+ TG + T LDR
Sbjct: 707 VTATDADSGANG-KISYSILSG-NENMAFAMDRFTGEITTRVPLDR-------------- 750
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +T+ A+D + A T+ I++ D NDN+P F
Sbjct: 751 -----------ETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTF 790
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D +NG + Y II A F ID TG + + +DR
Sbjct: 1223 LRVLASDPDAGANG-RVTYSIISGNHGNA-FRIDSTTGRITVVGVVDR------------ 1268
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +T+ A+D+G P + ITV D NDN P+F
Sbjct: 1269 -------------EALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIF 1308
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D SN + Y I++ G+ + F+I+ G++ +KEI
Sbjct: 1330 VTATDRDEGSNA-QVFYSIVR--GDTSAFAINAMNGVLTV-----------KKEI----- 1370
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ E +T+ A D G+P ++ + + V D+NDN P+F+ Y
Sbjct: 1371 ---------NRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSY 1417
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D +N RI F I +G++ LDR++ K Y
Sbjct: 1637 FKLAATDADEGTNA-----RITYNLSRNDAFMIGASSGVITLAQPLDREN----KSTY-- 1685
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D+ +QA D+GTP + + T+++TV DIND+ P+ +
Sbjct: 1686 -DLAIQA------------------RDHGTPPQASSITIRVTVIDINDHRPLIN 1720
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D N ++Y A F++D TG+V +LD
Sbjct: 291 VTVTASDKDN-GNNADLRYSFTSGNTNHA-FTLDAVTGVVTVSRSLDF------------ 336
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + + D G+P L+D + I V DINDN P+F Y
Sbjct: 337 -------------EQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAY 381
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +TV A D G+P S +KIT+ ++NDN P F
Sbjct: 956 DYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSF 997
>gi|66773234|ref|NP_001019360.1| protocadherin 2 gamma 17 [Danio rerio]
gi|51557431|gb|AAU06402.1| protocadherin cluster 2 gamma 17 [Danio rerio]
Length = 956
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + ITV A D+G+P LS + T+ + V DINDN P+FD+ Y
Sbjct: 419 DRETQSQFNITVTATDSGSPALSSSKTVSLKVSDINDNAPIFDQKSY 465
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 48 RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIN 107
+ +P+ + + + D +ALDR E + + +IA D G PQ S + + +TV D+N
Sbjct: 191 QSNPDGSRYVEMVLD---KALDR---EEHPHLSLKLIAVDGGNPQRSGSVNIDVTVLDVN 244
Query: 108 DNEPMFDRVQY 118
DN P+F++ Y
Sbjct: 245 DNAPVFNQTVY 255
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ K+ V A+D G+P LS ++KI ++D NDN P
Sbjct: 522 LHAVRSFDYEQVKQFSFIVKAQDGGSPPLSSNVSVKILIQDQNDNAP 568
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 3 VHATDVDPPSNGG-TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V+ATD D SNG T+ + +K R F+ID+ TG+V L +D + +R
Sbjct: 272 VNATDADSGSNGHITLSFSDLKEQ-SRGIFNIDENTGLVSVLGNIDFEKDKR-------F 323
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLS 94
+IRV+A D+ ++ I V+ ++ P ++
Sbjct: 324 EIRVKATDQGGLTSTSKLIIEVVDVNDNAPVIT 356
>gi|218505733|ref|NP_001136214.1| protocadherin-15 isoform CD2-1 precursor [Mus musculus]
Length = 1790
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 662 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 VVTDVNDNAPVFD 730
>gi|28571710|ref|NP_731930.2| cadherin 88C [Drosophila melanogaster]
gi|28381297|gb|AAF55082.2| cadherin 88C [Drosophila melanogaster]
Length = 2002
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDR----DDPEREK 55
+Q+ A D D + + Y I++ R+ F+ID ++G+++ +++ D D R
Sbjct: 641 LQLEARDADLNGTENSQVTYEIVEGL-YRSNFTIDPQSGLLRPVHSFDFEELVDGSSRRS 699
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ Y + +EI + V A D+G P LS + I V+D+NDN P+F +
Sbjct: 700 DPYTGGSFSI-----------REIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQ 748
Query: 116 VQY 118
Y
Sbjct: 749 SFY 751
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYA--LDRDDPEREKEIY 58
+QV A D D + + YRI G+ KF I+ ETG++ + LD D E ++ +Y
Sbjct: 766 LQVTAIDRDGSAPNNVVVYRIQTGAGD--KFIINSETGVISVAHGANLDPDLTESKRSLY 823
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNG--TPQLSDACTMKITVEDINDNEPMF 113
+ +R + + + + IA D G QL CT+ I+++D+N+ P+
Sbjct: 824 TLSVVRSKEIPFCRILKPFRNCLPQIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL 880
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+DVD TI Y + P R+ +D +TG EI +
Sbjct: 1021 VNVLASDVDKNR---TITYALEGNPTYRSLMHLDPQTG-----------------EIVVA 1060
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I D E+ + + +V A D+G P S + ITV D NDN P F
Sbjct: 1061 SKI--------DHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYF 1105
>gi|348516614|ref|XP_003445833.1| PREDICTED: protocadherin-20-like [Oreochromis niloticus]
Length = 886
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
I +ALDR E + E +IAED GTP L A T+KI + D+NDN P F Q
Sbjct: 210 IVTEALDR---ETQAEYITDIIAEDGGTPPLLGAATLKIVITDVNDNCPQFKESQ 261
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 30/113 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A+D D S G + APG F +D+ TGI+ +LDR+
Sbjct: 493 QLQASDQDSESRGEVLYLLGGDAPG---IFVVDRVTGILTVATSLDRE------------ 537
Query: 62 DIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
EKE Y ++ A D GTP+ T+ +TV+D NDN P F
Sbjct: 538 --------------EKETYRFIVRAVDQGTPRREAIATVVVTVQDRNDNSPRF 576
>gi|345308451|ref|XP_003428695.1| PREDICTED: protocadherin Fat 4-like, partial [Ornithorhynchus
anatinus]
Length = 563
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ + D E E+ +TV+A D G P LS + +++ V D+NDN+P+F R Y
Sbjct: 127 TVDGEVRLVGPLDREEAAELAVTVVATDKGGPALSASAEVRVVVLDVNDNDPVFSRGAY 185
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D SNG +QY F+I+ +GI++T+ LDR+ P E
Sbjct: 799 VQISATDRDSHSNG-RVQYTFQNGDDGDGDFTIEPTSGIIRTVRKLDRESVPFYE----- 852
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L +++ V+D+NDN P+F
Sbjct: 853 ---------------------LTAYAVDRGMPPLRSPVRIQVAVQDVNDNAPVF 885
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD+D SN + Y II R +FSID TG V+ + LD
Sbjct: 383 VRVTATDIDKDSNA-LVHYNIISG-NSRGQFSIDSVTGEVQIVTPLDF------------ 428
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
E E+E + V A+D G P LS+ T+ I V D+ND+ P+F
Sbjct: 429 -------------ETEREYTLRVRAQDAGRPPLSNNTGTISIQVVDVNDHAPIF 469
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + VIA+DNG PQ SD ++I V D+NDN P F QY
Sbjct: 738 DYEDQVTYTLAVIAKDNGIPQKSDTTYVEIMVNDVNDNAPQFANTQY 784
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD+D +N I+YR + + F ID +G++ T +DR+ E+ I
Sbjct: 275 LQLRATDMDSQANA-NIKYRFVNEQAAHSVFEIDARSGLITTSGQVDREKREKYSLIVEA 333
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+D Q D ++ IT++ E++ PQ S+ + EDI
Sbjct: 334 SD---QGKDPGPRSSTVKVDITILDENDNVPQFSEKRYIVQVREDI 376
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID TG++ T+ LDR+ + D+ Y V A D+GT
Sbjct: 198 FSIDSVTGLISTIEILDRE----------SMDLH---------------YFRVSAIDHGT 232
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P+LS + ITV D ND+ P+F++ +Y
Sbjct: 233 PRLSATTMVAITVSDRNDHSPLFEQSEY 260
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ V A D+G P LS + + IT+ D+NDN P F + +Y
Sbjct: 533 DREMVEQYVFGVEARDHGNPSLSASAGVTITIMDVNDNRPEFTQREY 579
>gi|345313200|ref|XP_003429354.1| PREDICTED: protocadherin-1 [Ornithorhynchus anatinus]
Length = 681
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SN + Y + P R FSI ++G ++ L +LDR+
Sbjct: 129 QVAATDADAGSNAEVV-YSLEPEPAARDLFSITPDSGQIRVLASLDRE------------ 175
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++E Y + V+A D G+P L T+ + V D NDN+P F
Sbjct: 176 --------------QREAYELKVLAADRGSPSLQGTATVAVKVLDRNDNDPKF 214
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +E + ++A D P LS ++K+ V D+NDN P+F
Sbjct: 67 DYETAQEYTVEIVARDLANPPLSSTNSLKVQVVDVNDNAPVF 108
>gi|410948485|ref|XP_003980969.1| PREDICTED: protocadherin beta-14-like [Felis catus]
Length = 619
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D DD + E+++ Q+LDR E+E E + V A D G+P S ++I V DI
Sbjct: 184 DSDDGRKYPELFLD-----QSLDR---EKESEFTLIVTALDGGSPSRSGTTLVRILVFDI 235
Query: 107 NDNEPMFDRVQY 118
NDN P F+R Y
Sbjct: 236 NDNAPEFERSVY 247
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + E IT+ D GTP+L + +TV D+NDN P F + Y
Sbjct: 411 DRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTY 457
>gi|410933320|ref|XP_003980039.1| PREDICTED: protocadherin gamma-A2-like, partial [Takifugu rubripes]
Length = 258
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 1 MQVHATDVD---PPSNGGTIQYRIIKAPGERAKF----SIDKETGIVKT-LYALDRDD-- 50
+ V TD++ P ++++I ++ AKF ++D + G+ Y L R D
Sbjct: 109 VAVEVTDINDNPPLFERSEMKFKISESAVSGAKFLLERAVDADVGLNGLQSYFLTRTDHF 168
Query: 51 -------PEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
PE EK + + I + LDR E+E+EI++ + A D G P LS + +TV
Sbjct: 169 VLKLKEQPEGEKVVEM---ILQKPLDR---EKEEEIFLVLTAMDGGQPVLSGTAQVHVTV 222
Query: 104 EDINDNEPMFDRVQY 118
D NDN P+F + Y
Sbjct: 223 LDANDNAPVFTKPVY 237
>gi|15054521|gb|AAK82656.1|AF217288_1 protocadherin-S [Homo sapiens]
Length = 1310
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|148664777|gb|EDK97193.1| mCG140843 [Mus musculus]
Length = 794
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E+++ V A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 202 DRERASELHLVVKATDGGKPELTGTLELHITVLDANDNAPAFDRAIY 248
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 413 ALDR---ETTADYKVVVTARDGGSPALWATASVSVEVADVNDNAPAFAQSEY 461
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 1 MQVHATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++++A+D+D SNG + + +P A F ID +G +K +D ++ K
Sbjct: 263 IRLNASDLDEGSNGQILYSFAADVSPKTEATFHIDSVSGEIKVNGKIDFEETNLWK---- 318
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I+ +A+D+ G+P + CT+ I V DINDN P
Sbjct: 319 ---IQAEAVDK------------------GSPPMFGHCTILIEVLDINDNAP 349
>gi|15054519|gb|AAK82655.1|AF206516_1 protocadherin-S [Homo sapiens]
Length = 1347
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|403301747|ref|XP_003941544.1| PREDICTED: protocadherin Fat 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 4559
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD P NG I + I+ G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSPPNG-QIHFSIVN--GDRDNEFTVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANY 3451
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 24 APGER--AKFSIDKETGIVKTLYALDRDDPEREK-EIYITTDIRVQALDRDDPEREKEIY 80
+PG + A F+ K+ G + L R E+ K +I+ T + D D E K Y
Sbjct: 3250 SPGSQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIHPKTG-GISVSDVLDYELCKRFY 3308
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A+D GTP LS T+ I + D+NDN P F + Y
Sbjct: 3309 LVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVY 3346
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID ETG++ LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFSIDDETGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D +N + Y+I++ F ID +G++ T LD
Sbjct: 2307 LQIVSTDADSENNK-IVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V + D+G P LS + I + D+NDN P+F+++ Y
Sbjct: 2355 --------------ELVQHCTLKVRSTDSGFPALSSEVLVHIYISDVNDNPPVFNQLIY 2399
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSY 836
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS T+ ITV DINDN P+F+R Y
Sbjct: 3191 QPLDR---EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDY 3241
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDPGTYG-QISYAIINDFA-KDRFLIDSNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E ++ I V A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRENP-LEGDVSIFVRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2605
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTQQFAINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+K+ ++D+ND P F
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPAF 936
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 28/115 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D +NG + E+ F+ID TG + TL LD
Sbjct: 2835 QVRAIDMDWGANGQVTYSLHSDSEPEKVMEAFNIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E + +V+A D G LS + + V DINDN P+F
Sbjct: 2884 --------------ETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVF 2924
>gi|270288729|ref|NP_001161834.1| protocadherin-11 X-linked isoform g precursor [Homo sapiens]
gi|61814235|gb|AAX56123.1| protocadherin 11X isoform 7 [Homo sapiens]
Length = 1310
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|262263239|tpg|DAA06616.1| TPA_inf: protocadherin gamma b14 isoform [Anolis carolinensis]
Length = 939
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E IT+ A D GTP LS T+ + + DINDN P+FD++ Y
Sbjct: 412 DRESTPEYNITITATDKGTPPLSAEKTISLKISDINDNSPVFDKLSY 458
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E+ ++T++A D G P + + ITV D+NDN P+F + Y
Sbjct: 202 DHETERSFHLTLMALDGGKPPKTGTAKIWITVIDVNDNSPVFSQELY 248
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +E + V A+D G+P LS T+KI + D ND P
Sbjct: 522 DYEQSREFQVEVRAQDGGSPPLSSTATVKIFILDQNDKSP 561
>gi|410974957|ref|XP_003993905.1| PREDICTED: protocadherin-15 isoform 9 [Felis catus]
Length = 1538
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 LVTDVNDNAPVFD 718
>gi|410974949|ref|XP_003993901.1| PREDICTED: protocadherin-15 isoform 5 [Felis catus]
Length = 1672
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 LVTDVNDNAPVFD 718
>gi|270006422|gb|EFA02870.1| fat protein [Tribolium castaneum]
Length = 1781
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
I ++ F ID + G +KTL+ DR+ E+ TT + +L+
Sbjct: 1125 IFSLSNSQSDFVIDPKNGFIKTLHVFDRE------ELVQTTGLNYLSLE----------- 1167
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG+P+L D + + V D+NDN P F R Y
Sbjct: 1168 --ATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPY 1203
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ V A D G P LS +++ +ED+ND+ P+FD Y
Sbjct: 950 SLHVEVTASDGGEPPLSSKQLVRVVIEDVNDHTPVFDHTSY 990
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 420 VRVNGVLDREEISKYN---LTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEY 473
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A DNG P+LS I VED NDN P F
Sbjct: 1377 LNITASDNGNPRLSTTILFAIAVEDANDNPPSF 1409
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + ++ + D E + ++ + A D G P + +T+ D+NDN P+FD Y
Sbjct: 190 TSYLHLETTGKLDRESQGFYFLNISARDGGAPPKFGYLQVNVTILDVNDNPPIFDHSDY 248
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VIA+D G P S T+ + V D+NDN P F + Y
Sbjct: 649 IHVIAKDQGLPPQSSTATVYLNVIDVNDNSPEFYPLNY 686
>gi|14589922|ref|NP_116751.1| protocadherin-11 X-linked isoform d precursor [Homo sapiens]
gi|13161066|gb|AAK13471.1|AF332219_1 protocadherin 11 [Homo sapiens]
gi|189442394|gb|AAI67817.1| Protocadherin 11 X-linked [synthetic construct]
Length = 1337
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|443683183|gb|ELT87522.1| hypothetical protein CAPTEDRAFT_92665, partial [Capitella teleta]
Length = 803
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D N Y I+ + F+ID+ TG + LDR
Sbjct: 416 LRINATDKDLGDNAKIFTYSILPSHTSTNTFTIDRHTGRITNTKILDR------------ 463
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E + Y+ V A D G P LS ++ I V D NDN P+F+
Sbjct: 464 -------------EAQSVYYLLVSASDRGIPPLSSTASVSIFVADRNDNPPVFE 504
>gi|345328642|ref|XP_001507394.2| PREDICTED: protocadherin beta-3-like [Ornithorhynchus anatinus]
Length = 798
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+ALDR E + EIY+T+ A D G+P S + I V DINDN P F + QY
Sbjct: 198 VLVKALDR---EEQSEIYLTITALDGGSPPRSGTAGVHILVVDINDNTPEFTQPQY 250
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + E IT+ D G+P L + + + D+NDN P+F++ Y
Sbjct: 413 DRESQSEYNITIAVLDLGSPSLRTEQNITVLISDVNDNPPVFNQTVY 459
>gi|270288731|ref|NP_001161835.1| protocadherin-11 X-linked isoform h precursor [Homo sapiens]
gi|61814237|gb|AAX56124.1| protocadherin 11X isoform 6 [Homo sapiens]
Length = 1329
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|410974951|ref|XP_003993902.1| PREDICTED: protocadherin-15 isoform 6 [Felis catus]
Length = 1681
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 657 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 712
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 713 LVTDVNDNAPVFD 725
>gi|410974941|ref|XP_003993897.1| PREDICTED: protocadherin-15 isoform 1 [Felis catus]
Length = 1679
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 655 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 LVTDVNDNAPVFD 723
>gi|355687669|gb|EHH26253.1| hypothetical protein EGK_16172 [Macaca mulatta]
Length = 1289
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD
Sbjct: 180 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY------------ 225
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + V A D G P+LS+ +K+ V DINDN P F
Sbjct: 226 -------------EHTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF 265
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 536 VLLHSLDRETSANHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 588
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID E+G + T+ LDR E ++ + + V+A+D G
Sbjct: 266 FTIDPESGAISTVRTLDR-------------------------EAQEALELRVVAQDLGE 300
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L C + +TV D+NDNEP+F R Y
Sbjct: 301 PPLFATCLVSVTVADVNDNEPIFWRQVY 328
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG ++Y I+ A F ID +G++ T LD
Sbjct: 1913 IQVTASDPDSGLNG-RVEYSIVSGNQGEA-FQIDALSGVLTTSALLDH------------ 1958
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E K + A D G P+LS T++I V DINDN P F
Sbjct: 1959 -------------ESTKSYSLITQATDKGKPRLSATATVRIQVTDINDNAPAF 1998
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHA D D NG + Y I ++ A F +D+ +G++ LD
Sbjct: 1291 RVHARDPDEGRNG-KVTYGI-RSGNANAAFMLDESSGLLTIACPLD-------------Y 1335
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ Q + +T++A D+G P S + TM +TV D+ND P+F + Y
Sbjct: 1336 EVKTQHI------------LTLVALDDGVPARSSSQTMTVTVLDVNDEAPVFKQHLY 1380
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D+D NG ++Y II +++ F I++ +G + T ALDR
Sbjct: 1501 VLASDMDAGRNGA-VKYHIINGNTDKS-FVINETSGELATTRALDR-------------- 1544
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + +TV D G P S +++ V D ND+ P F + Y
Sbjct: 1545 -----------EQVRNFTLTVQCSDQGDPPQSSTIQLQVRVLDDNDHSPAFPMLHY 1589
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D++DN P F +QY
Sbjct: 2269 VLLHSLDREASASHQ---LVILASDHGCPPLSSTVIVSIQVLDVDDNPPRFSSLQY 2321
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ALDR E + +TV+ D+G+P + + +TV DINDN P F
Sbjct: 902 ALDR---EHQMHHQMTVLVTDHGSPPRNATMEVYVTVTDINDNSPFF 945
>gi|270288725|ref|NP_001161832.1| protocadherin-11 X-linked isoform e precursor [Homo sapiens]
gi|61814231|gb|AAX56122.1| protocadherin 11X isoform 8 [Homo sapiens]
Length = 1339
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|410974947|ref|XP_003993900.1| PREDICTED: protocadherin-15 isoform 4 [Felis catus]
Length = 1674
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 LVTDVNDNAPVFD 718
>gi|190336593|gb|AAI62450.1| Protocadherin 1 gamma 3 [Danio rerio]
Length = 939
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +ALDR E+E + IT+ A D G+P LS + T+ + V D+NDN P+F++ Y
Sbjct: 404 VMTKALDR---EKESDYNITITATDGGSPPLSTSMTIHLFVSDVNDNPPVFEQQVY 456
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E++KE+ + + A D G+PQ S + ITV D NDN P+FD+ Y
Sbjct: 199 LDR---EQQKEMDLILTATDGGSPQRSGTAVIHITVLDANDNVPVFDQPVY 246
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 34/116 (29%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE------RAKFSIDKETGIVKTLYALDRDDPEREK 55
V A D D NG T+ Y ++ P E + SI+ +TG++ T+ + D
Sbjct: 472 SVSANDPDWRQNG-TVLYSLV--PSEVSGVPVSSFLSINGDTGVIHTVRSFDY------- 521
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ + + V+A DNG+P LS T+K+ + D NDN P
Sbjct: 522 ------------------EQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSP 559
>gi|410974959|ref|XP_003993906.1| PREDICTED: protocadherin-15 isoform 10 [Felis catus]
Length = 1528
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 LVTDVNDNAPVFD 718
>gi|403301749|ref|XP_003941545.1| PREDICTED: protocadherin Fat 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 4591
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD P NG I + I+ G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSPPNG-QIHFSIVN--GDRDNEFTVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANY 3451
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 24 APGER--AKFSIDKETGIVKTLYALDRDDPEREK-EIYITTDIRVQALDRDDPEREKEIY 80
+PG + A F+ K+ G + L R E+ K +I+ T + D D E K Y
Sbjct: 3250 SPGSQVLAVFATSKDIGTNAEITYLIRSGNEQGKFKIHPKTG-GISVSDVLDYELCKRFY 3308
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A+D GTP LS T+ I + D+NDN P F + Y
Sbjct: 3309 LVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVY 3346
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID ETG++ LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFSIDDETGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETTGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D +N + Y+I++ F ID +G++ T LD
Sbjct: 2307 LQIVSTDADSENNK-IVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2354
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V + D+G P LS + I + D+NDN P+F+++ Y
Sbjct: 2355 --------------ELVQHCTLKVRSTDSGFPALSSEVLVHIYISDVNDNPPVFNQLIY 2399
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSY 836
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS T+ ITV DINDN P+F+R Y
Sbjct: 3191 QPLDR---EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDY 3241
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDPGTYG-QISYAIINDFA-KDRFLIDSNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E ++ I V A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRENP-LEGDVSIFVRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2605
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTQQFAINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+K+ ++D+ND P F
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPAF 936
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 28/115 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D +NG + E+ F+ID TG + TL LD
Sbjct: 2835 QVRAIDMDWGANGQVTYSLHSDSEPEKVMEAFNIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E + +V+A D G LS + + V DINDN P+F
Sbjct: 2884 --------------ETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVF 2924
>gi|14589920|ref|NP_116750.1| protocadherin-11 X-linked isoform c precursor [Homo sapiens]
gi|74761344|sp|Q9BZA7.1|PC11X_HUMAN RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome;
Short=PCDH-X; AltName: Full=Protocadherin-S; Flags:
Precursor
gi|13161063|gb|AAK13470.1|AF332218_1 protocadherin 11 [Homo sapiens]
Length = 1347
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|66773340|ref|NP_001018871.1| protocadherin 1 gamma 3 precursor [Danio rerio]
gi|50881548|gb|AAT85354.1| protocadherin cluster 1 gamma 3 [Danio rerio]
Length = 939
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +ALDR E+E + IT+ A D G+P LS + T+ + V D+NDN P+F++ Y
Sbjct: 404 VMTKALDR---EKESDYNITITATDGGSPPLSTSMTIHLFVSDVNDNPPVFEQQVY 456
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E++KE+ + + A D G+PQ S + ITV D NDN P+FD+ Y
Sbjct: 199 LDR---EQQKEMDLILTATDGGSPQRSGTAVIHITVLDANDNVPVFDQPVY 246
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 34/116 (29%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGE------RAKFSIDKETGIVKTLYALDRDDPEREK 55
V A D D NG T+ Y ++ P E + SI+ +TG++ T+ + D
Sbjct: 472 SVSANDPDWRQNG-TVLYSLV--PSEVSGVPVSSFLSINGDTGVIHTVRSFDY------- 521
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E+ + + V+A DNG+P LS T+K+ + D NDN P
Sbjct: 522 ------------------EQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSP 559
>gi|348544967|ref|XP_003459952.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
Length = 1540
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 25/93 (26%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
G FSID +G+V ALDR E + E + V+A
Sbjct: 655 GGEGSFSIDPVSGMVSLAGALDR-------------------------ETKAEYSLLVVA 689
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ED G P S T+ + V DINDN P F +Y
Sbjct: 690 EDQGRPARSATATLTVQVSDINDNTPKFSVAEY 722
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + LDR++ +E Y +TV A D G P + ++++++ D+NDN+P+F Y
Sbjct: 983 TLLAIGPLDREN----RETYDLTVKALDKGNPPRENFTSIRVSLADLNDNKPVFSSSDY 1037
>gi|410913745|ref|XP_003970349.1| PREDICTED: protocadherin gamma-A10-like [Takifugu rubripes]
Length = 806
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 1 MQVHATDVD---PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+ +H DV+ P +I+ I ++ + +FSI++ A+ R ++
Sbjct: 104 VSLHVQDVNDNSPKFRENSIEMEISESAEKGTRFSIEEANDADIGQNAVQRYILQKNDNF 163
Query: 58 YITTDIRVQAL---DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ D + L +R D E++KEI + + A D G+PQ S + +TV D NDN P+F
Sbjct: 164 ILSVDNKKVELVLENRLDREKQKEINLLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFS 223
Query: 115 RVQY 118
+ Y
Sbjct: 224 QAVY 227
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 391 DRELVSDYNITIRATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 437
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 494 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 540
>gi|432099003|gb|ELK28485.1| Protocadherin Fat 1 [Myotis davidii]
Length = 1119
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + +FSID TG+VK + LD PE + Y+
Sbjct: 842 IQVEATDKDLGPNG-QVTYSILT---DTDQFSIDSVTGVVKVVQPLD---PEVQPVHYLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ R QA + P+L +K++VED+NDN P F Y
Sbjct: 895 IEARDQATEE--------------------PRLFSTVLLKVSVEDVNDNPPKFIPAHY 932
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPER------- 53
+ V+ATD+D NG + I E + F ID +TG++K L LDR+ +R
Sbjct: 737 LLVNATDLDTGFNGKLVY--AISGGNEDSCFLIDVDTGMLKVLSPLDRETTDRYTLNITA 794
Query: 54 ------EKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
+K ++ DIRV + + PE +E Y ++ED
Sbjct: 795 SDLGLPQKAVWRLLDIRVLDANDNPPEFLQESYFVEVSED 834
>gi|410974945|ref|XP_003993899.1| PREDICTED: protocadherin-15 isoform 3 [Felis catus]
Length = 1923
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 655 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 LVTDVNDNAPVFD 723
>gi|193787782|dbj|BAG52985.1| unnamed protein product [Homo sapiens]
Length = 1289
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 180 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY-------ELTSS 230
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 231 YSLIVQATDK------------------GMPRLSNTTVIKVQVTDINDNAPAF 265
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 536 VLLHSLDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 588
>gi|41223221|emb|CAD92412.1| protocadherin [Homo sapiens]
Length = 831
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 307 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 221 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 279
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 280 NDNAPVF 286
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|351705785|gb|EHB08704.1| Protocadherin-20 [Heterocephalus glaber]
Length = 952
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 41 KTLYALDRDDPER-EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM 99
+ ++ LD ++ E E+ Y+ I + ALDR+ ++ I +IAED G+P LS + T+
Sbjct: 254 QGMFTLDVEENENGERTPYL---IVMGALDRETQDQYVSI---IIAEDGGSPPLSGSATL 307
Query: 100 KITVEDINDNEPMF 113
I++ DINDN P+F
Sbjct: 308 TISISDINDNCPLF 321
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 28/112 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+++ATD D G Q P + FS+D TGI+ LDR+
Sbjct: 557 KLYATDADSGERG---QVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE------------ 601
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+EK Y TV A D G P T+ +TV D NDN P F
Sbjct: 602 ------------EKEKYRY-TVRAVDCGKPPRESVATVALTVLDKNDNSPRF 640
>gi|327270369|ref|XP_003219962.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 825
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E IT+IA D GTP LS T+ + + DINDN P F+ Y
Sbjct: 415 DRERKPEYNITIIATDKGTPPLSSNKTIYLQISDINDNSPAFEEKAY 461
>gi|198414204|ref|XP_002125436.1| PREDICTED: similar to type II cadherin, partial [Ciona
intestinalis]
Length = 594
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 25/107 (23%)
Query: 9 DPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYA-LDRDDPEREKEIYITTDIRVQ 66
DP G I+Y ++ +PG+ A KF I E G V T+ + LDR++ + T ++ +Q
Sbjct: 277 DPTQPYGQIRYSVLPSPGDAATKFIIHHERGTVSTITSNLDREESD-------TYELVIQ 329
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
A RDDP N S + T+ I+V D+NDN P+F
Sbjct: 330 A--RDDP--------------NARLSFSSSTTLTISVIDVNDNPPVF 360
>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
Length = 3365
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D NG + YR+ + P R F I+ +G++ + LDR
Sbjct: 916 FQVLAIDLDEGPNGW-VTYRMQVGMP--RMDFLINSTSGLIISTTVLDR----------- 961
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER E Y+ V+A D GTP S T+ + V D+ND P F
Sbjct: 962 --------------ERITEYYLRVVASDAGTPSKSSTSTLTVKVLDVNDESPTF 1001
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG + + G + FSID +G+++T LDR
Sbjct: 2640 EVYATDKDEGLNGAVLYSLLKTGAGNKDWEYFSIDAVSGLIQTAMRLDR----------- 2688
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E++ E + ++A D G P +++ ++DI+DNEP+F R
Sbjct: 2689 --------------EKQAEYNLIIVASDQGQPAYETMQPLQVALDDIDDNEPIFLR 2730
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N + YRI G + +F ID TG+
Sbjct: 2095 LQVTATDADSGLNK-QLDYRI--EGGGQDRFLIDATTGV--------------------- 2130
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IRV L D ER+ +TV+A D GTP LS T+ I ++D+ND P F
Sbjct: 2131 --IRVANLSIDREERDA-YQLTVVAVDQGTPALSGTATVSIFIDDVNDCRPEF 2180
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 30/111 (27%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD+D NG + Y I + PG A F I+K++G+ IT+ R
Sbjct: 2539 ATDLDEGDNG-VVTYSI-EGPGAEA-FKINKDSGL-------------------ITSRRR 2576
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+Q+ +R + +TV+A D G P L + I V DINDN P+F R
Sbjct: 2577 LQSYERFN--------LTVVATDKGRPPLWGTTMLHIEVIDINDNRPVFVR 2619
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NGG + Y+I+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1237 VRATDRDT-GNGGLVSYQILS--GAEGKFEIDESTGLITTIDYLDYE----TKTSYL--- 1286
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +Y++++ E + Q S++ + +E+I
Sbjct: 1287 MNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEAVIMENI 1332
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHATD D S G + Y P +FS+DK+TG++ + LD + +R
Sbjct: 486 LQVHATDNDVGSYG-KVSYFFSDDPD---RFSLDKDTGVILLMARLDFETMQRYT----- 536
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TVIA D G + A ++I V D+NDN P F + Y
Sbjct: 537 --------------------LTVIARDGGGEE--TAGRIRINVLDVNDNVPTFQKEAY 572
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF--SIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A+D D P N I Y I+ A R F ++ + G++ + LD +
Sbjct: 587 VRLRASDEDSPPNN-QITYSIVHASAFREYFDITVSEGYGVISVNHPLDYE--------- 636
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q ++ IY+TV+A+D G P L+ + I V D NDN P F + Y
Sbjct: 637 -------QVVN-------GVIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSY 682
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N + Y I E F +D+ TG + T R P
Sbjct: 1554 VQVRATDRDAGLNS-VLSYYITHG-NEDLTFRMDRVTGEIAT-----RPSPP-------- 1598
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ + V ED GTP LS + +T+ D NDN P+F + Y
Sbjct: 1599 -----------DRERQSSYCLLVTVEDEGTPSLSATTKVFVTILDENDNAPVFQQQLY 1645
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D IQY + G KF I+ +TG + L ALDR+ +K+ Y
Sbjct: 2428 LRVKATDADS-GRFAVIQYSLGDGEG---KFGINPDTGDIYILSALDRE----KKDHYTL 2479
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T A+ RD+P D + + ++ + ITV DIND P F + Q+
Sbjct: 2480 T-----AVARDNPG------------DISSNRRENSVQVLITVLDINDFRPQFSKSQF 2520
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + TV A DNG+P+ S + + + DINDN P+F + Y
Sbjct: 2367 DYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPIFSQPSY 2413
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 25/139 (17%)
Query: 1 MQVHATDVDPPSNGG--TIQYRIIKAPGERAKFSIDKETGIV------------------ 40
M V ATD PP+N G ++ ++ E +FS ++
Sbjct: 1287 MNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEAVIMENIPLGSEVLRVQARSI 1346
Query: 41 ----KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREK-EIYITVIAEDNGTPQLSD 95
+ Y D + + ++ I + +REK + Y + D+G P++
Sbjct: 1347 DNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDREKGDFYTLTVVADDGGPKVDS 1406
Query: 96 ACTMKITVEDINDNEPMFD 114
+ ITV D NDN P FD
Sbjct: 1407 TVKVTITVLDENDNSPQFD 1425
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 23/120 (19%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D SN I Y I A + F + +E G ++ L LDR EKE Y + ++
Sbjct: 2759 AVDADEGSNA--IVYYFIAAGNRESNFQLSRE-GKLQVLRDLDR-----EKEPYYSIIVK 2810
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACT------MKITVEDINDNEPMFDRVQY 118
+ P R + G Q D T ++I ++DIND P F + +Y
Sbjct: 2811 ASSQRNWSPPR---------GQRAGRAQHWDLSTDLTLQEVRIFLDDINDQSPQFTKSEY 2861
>gi|402592929|gb|EJW86856.1| hypothetical protein WUBG_02233 [Wuchereria bancrofti]
Length = 2355
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D NG I Y +I K F ID+ +G EI+
Sbjct: 960 VKVAARDSDSGMNG-KISYSLIAGDAVAQKYFKIDEVSG-----------------EIFT 1001
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
T + D E+ E ++ VIA+D+G PQLS+ +KI V D NDN P F +
Sbjct: 1002 TCGL--------DAEQLNEYHLHVIAKDHGNPQLSEMVVVKIEVLDKNDNSPRFSNL 1050
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHA D+D NG +QYRI+ F I+ G + Y + D E +K ++
Sbjct: 332 VHAVDLDMGYNG-QLQYRILPWSNSEGLFMINPVLGYLLVHYQI---DAEEQKNYHLL-- 385
Query: 63 IRVQALDRDDPEREK---EIYITVIAEDNGTPQLSDACTMKI 101
++A D P R I +TV+A + +P+L + ++I
Sbjct: 386 --IEAKDYGTPRRLSTVVSITVTVLASNKESPRLRNFYHIEI 425
>gi|334311077|ref|XP_003339577.1| PREDICTED: protocadherin beta-3-like [Monodelphis domestica]
Length = 795
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E + E+ +T+IA D G+P S A +++ V D+NDN P+F + QY
Sbjct: 197 KALDR---EMQPEVTLTLIALDGGSPPRSGAAQIRVLVVDVNDNAPVFSQAQY 246
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ D GTP+L+ + + + D+NDN P F + Y
Sbjct: 409 DRESRSQYNITITVTDLGTPRLTTERNITVLISDVNDNPPAFTQTAY 455
>gi|334311075|ref|XP_001377503.2| PREDICTED: protocadherin beta-3-like [Monodelphis domestica]
Length = 840
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E + E+ +T+IA D G+P S A +++ V D+NDN P+F + QY
Sbjct: 242 KALDR---EMQPEVTLTLIALDGGSPPRSGAAQIRVLVVDVNDNAPVFSQAQY 291
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + IT+ D GTP+L+ + + + D+NDN P F + Y
Sbjct: 454 DRESRSQYNITITVTDLGTPRLTTERNITVLISDVNDNPPAFTQTAY 500
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 36 ETGIVKTLYALDRDDPEREKEIYITTDIRVQ-ALDRDDPEREKEIY-ITVIAEDNGTPQL 93
+ G+V Y++ + + E + I+ ++ V+ ALDR++ +IY ITV+A DNG PQ
Sbjct: 1008 QNGLVT--YSVTQGNTENKFGIFPDGNLYVKNALDREN----TDIYTITVVASDNGVPQR 1061
Query: 94 SDACTMKITVEDINDNEPMFDRVQY 118
S + + I V D NDN P+F+ Y
Sbjct: 1062 SSSAVVTIHVLDANDNRPLFNLQDY 1086
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+HATD D N G I Y +++ P + KF ID+ TG +I
Sbjct: 895 QIHATDRDDGPN-GQIVYELLRNPDQ--KFRIDETTG-------------------WIYL 932
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ V + R Y+ V+ D G PQLS + + V DIND+ P+F + +Y
Sbjct: 933 NLPVDSSVR-------TYYLQVLVTDFGVPQLSSILNVTVEVRDINDHSPVFVQTRY 982
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D SNG + Y I++ G+ +FS+D +GI + LD+ E + Y+
Sbjct: 1847 EVIAIDPDEGSNG-NVTYSILEDWGQD-RFSLDSYSGI----FTLDKKLDFEEVQYYL-- 1898
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V A D GTP LS + + + D+NDN P+FD Y
Sbjct: 1899 -------------------IVVEASDGGTPSLSSSVSCYFSTTDVNDNVPIFDPSSY 1936
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD+D S G + Y II+ + +FSID+ +G++ +LDR
Sbjct: 690 QVSATDLDFGSYG-RVAYTIIQGNSD-GRFSIDRNSGVIIATTSLDR------------- 734
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + A+D+G T+ ITV DI DN P FD++ Y
Sbjct: 735 ------------EQKNSYQLIINAQDDGGRSAIPYATVHITVVDILDNPPQFDKLGY 779
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 27/114 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD D N I+Y I FSID TG++ + LDR
Sbjct: 2159 FQVVATDADV-GNNAIIEYHITNG-NYNNDFSIDTHTGVLASENILDR------------ 2204
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E E ++V A+D G L T+ IT+ DINDN P F+
Sbjct: 2205 -------------EGRYEYTLSVTAQDKGMVPLVSTATVTITLNDINDNIPQFE 2245
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D SNG + Y + A + F+ID +TG + T LDR E + T
Sbjct: 2684 VTVSAIDHDSGSNG-QVLYLLQSATDD---FAIDSQTGELTTTKVLDR-----ETNAFYT 2734
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+T+ A D GTP L+ T+++ V D+NDN P F R
Sbjct: 2735 --------------------LTIHAVDQGTPSLTGTTTVEVKVLDVNDNGPAFTR 2769
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D Y I+ A F+ID++TG++ T LDR+
Sbjct: 3425 LTVSAEDYDLNEPDNLFSYEIVGGNINNA-FAIDQQTGVISTSAVLDRE----------- 3472
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++Y +TV A D G P + ++I+++D+NDN PMF
Sbjct: 3473 ---------------EIQLYNLTVAAVDGGNPPQTGYAEVEISIDDVNDNGPMF 3511
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D P NG Y ++ + + +FS+ + TG++ T +L+R+D
Sbjct: 3531 MILSAYDPDTPVNGAPFSYYLLPSD-DSEQFSVHQSTGLITTKASLNRED---------- 3579
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
+ + Y+ + + D+G PQ++ + I + D NDN
Sbjct: 3580 ---------------QSDYYLPIESRDSGVPQMTSTTRIHIMILDTNDN 3613
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A+D D SNG + + + G+ F+ID +Y+
Sbjct: 2268 ASDPDEDSNGEMVFEILQVSAGQEGLFTIDTS------------------GNVYVN---- 2305
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ LDR E E ++ + DNG P L+ + ++I V D+NDN P+F
Sbjct: 2306 -EVLDR---ETIAEYHLNIQVSDNGNPSLTSSALLEIQVGDVNDNPPIF 2350
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 28/113 (24%)
Query: 3 VHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
VHA DP + I Y I E +F I+ TG + + LDR
Sbjct: 1210 VHAAATDPDAGENARITYYITDG-NEGNQFHINPSTGQITLIGVLDR------------- 1255
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMF 113
E + +TV A D+GTPQL T + ITV D NDN P+F
Sbjct: 1256 ------------EAVPQYILTVSAVDHGTPQLLSTTTQVVITVLDENDNAPVF 1296
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 52 EREKEIYITTDIRVQALDRD--DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E E ++T+D + D D E + + +TV A D G P+ + + + ++D+NDN
Sbjct: 2076 ESMSEFFLTSDDVIVVSDDGVLDRETDAQYVLTVYAWDKGVPRRTSTMQITVIIQDVNDN 2135
Query: 110 EPMFDRVQY 118
P F Y
Sbjct: 2136 APAFSSESY 2144
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 34/121 (28%)
Query: 3 VHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
V ATD+D NG + Y + + PG F+I + TG + TL DR
Sbjct: 581 VSATDMDSGVNG-EVSYTLADHVEMDYPG---VFTIIENTGKIMTLVTFDR--------- 627
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E E ++VIA D G S + + V D+NDN P+F V
Sbjct: 628 ----------------ETIPEYTLSVIATDGGVLPRSSTTQVNLKVGDLNDNSPIFYPVN 671
Query: 118 Y 118
Y
Sbjct: 672 Y 672
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
KF+I+ TG ++T L+R+ E IY+ I ++ + P+
Sbjct: 2393 KFTINPLTGEIRTNAVLNRE----ENAIYVLEVIATDKVNVNSPDI-------------- 2434
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
LS T+ +TV DINDN+P F+ + Y
Sbjct: 2435 ---LSSTATVYVTVVDINDNDPAFEDLPY 2460
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 17 IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD--------PEREKEIYITTDIRVQAL 68
I YRI+ G KF I+++TG ++T+ LDR+ + ++ T + + L
Sbjct: 1760 IAYRIVS--GNDGKFYINEQTGQIRTMDELDRETTPSYTLAISASDGDLSSITTLDIYLL 1817
Query: 69 DRDD--PEREKEIYITVIAE 86
D +D PE K +Y V++E
Sbjct: 1818 DANDNPPEFSKSVYAFVVSE 1837
>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
Length = 4674
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+AT D N + Y I E+ KFSID +TG + +LD
Sbjct: 3290 VYATSKDIGVNADILYY--IMGGNEQRKFSIDSKTGALTLNESLDY-------------- 3333
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E K Y+T+ A D GTP LS+ + I+V D+NDN P F
Sbjct: 3334 -----------EMSKYYYLTIQAIDRGTPPLSNIAHVNISVLDVNDNSPKF 3373
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDP---EREKEIYITVIAEDNG 89
D +TG K Y ++ + E + EI+ DI L P E +K +I V +D+G
Sbjct: 2360 DADTGANAKLSYFIESINSENDSEIFYI-DINEGHLYLKKPLDYELKKFHHIVVHVKDHG 2418
Query: 90 TPQLSDACTMKITVEDINDNEPMF 113
+P LS C + ITV+D+NDN P F
Sbjct: 2419 SPPLSSRCNIFITVKDLNDNAPRF 2442
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 47/111 (42%), Gaps = 29/111 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QVHA D+D NG I Y I G + KF ID +G I+IT
Sbjct: 1314 FQVHAIDIDDGENG-RITYSIKSGKG-KNKFRIDNASG-----------------HIFIT 1354
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ +P+ E EI I AEDNGTP+ S + I V I N P
Sbjct: 1355 KSL--------EPDFEFEINIR--AEDNGTPKRSQTTRVNIVVIPIKSNSP 1395
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-----------------QALDRD 71
A F + + I +Y L D + YIT ++ V + LDR
Sbjct: 877 ATFRLTESARIGTVIYCLYATDADSGVNGYITYELSVDCDDFVVNKTTGCIVLSKPLDR- 935
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + A+D GTP LS + I V+D+NDN P+F +Y
Sbjct: 936 --EKQDRYALHITAKDGGTPTLSSEALVYILVDDVNDNAPVFGVQEY 980
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+VHATD D N ++Y ++ + F I K +GI++ LDR
Sbjct: 3185 KVHATDKDFGVNR-KVRYSLMGQNYDH--FEISKSSGIIRLEKNLDR------------- 3228
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV AED+G P+L + I + DINDN P F QY
Sbjct: 3229 ------------ETIPMFNLTVKAEDHGVPRLYSTANLLINILDINDNPPEFSLRQY 3273
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 25/103 (24%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER 75
+I Y II F I+ TG++KT + LDR E
Sbjct: 1222 SITYNIISG-NLVGYFEINSVTGVLKT---------------------TARKLDR---EN 1256
Query: 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ E + V DNG+P L+ + + V DINDN P FD+ Y
Sbjct: 1257 QAEHILEVAISDNGSPVLASTTRIVVNVLDINDNSPEFDQRAY 1299
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 40 VKTLYALDRDDPEREKEIYITTDIRVQALDRDDP-------------EREKEIYITVIAE 86
V + A DRD K +++ +D ++ R DP ER+ E + +
Sbjct: 786 VAWIEARDRDLGYNGKLVFVISDGDYDSVFRVDPDLGELKIIGYLDRERQNEYVLNITVY 845
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDR 115
D G P S + + IT+ D+NDN P+ +
Sbjct: 846 DLGYPMKSQSKMLPITIIDVNDNAPVLQK 874
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD DP G I Y + G + KFSID +IY T
Sbjct: 2520 IQVKATDADP-GEFGLITYSFVNDVG-KDKFSIDAN------------------GQIYTT 2559
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LDR+DP K+I +TV A+D G CT+++T+ D NDN P F +Y
Sbjct: 2560 -----EKLDREDPAN-KDIVLTVAAQDLGGRVC--YCTVQVTLLDDNDNAPCFRATEY 2609
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V+A D +N I Y I ++ E KF I TG + LD
Sbjct: 3269 LRVYAASKDIGTNA-EITYSI-RSGNEHGKFHIHPLTGAILVAQPLDY------------ 3314
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E ++ ++TV A D GTP LS T+ I + D+NDN PMF Y
Sbjct: 3315 -------------ETCRDYFLTVEARDGGTPSLSAITTVNIDLTDVNDNPPMFSHSVY 3359
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 29/113 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D G +QY I G +F+ID+ETG++ T LDR
Sbjct: 1064 LQVTAND-DDAGRDGEVQYSIRDGSG-LGRFAIDEETGVIYTTDMLDR------------ 1109
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPM 112
E + ++TV A D+G PQ + + + I VED+NDN P+
Sbjct: 1110 -------------ESKDSYWLTVYATDHGVVPQFT-SIDVFIQVEDVNDNAPL 1148
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D N ++Y+I + F ID +G++ T LD +
Sbjct: 2311 LQVVATDKDSEKNS-VVRYQIFSNSRNNTEYFHIDSSSGLILTARMLDHE---------- 2359
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q D V A DNG P LS ++ + + DINDN P+F+++ Y
Sbjct: 2360 ----LLQKYD-----------FIVRATDNGFPPLSSEVSVTVMLNDINDNPPVFNQLLY 2403
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A DVD NG + Y I+ G+R +F ID +G++K LDR E
Sbjct: 3374 IQLKADDVDSQLNGAVL-YSIVS--GDRHNQFLIDPLSGVIKVNKQLDR-------ETVP 3423
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + ++ALD +GTP +S + I + DINDN P F
Sbjct: 3424 SYSLAIRALD------------------SGTPPMSSTVMVNIDISDINDNPPTF 3459
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 28/103 (27%)
Query: 14 GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
G + Y + + G FSIDK +GIV + Q LDR
Sbjct: 3176 GRMVIYSLADSAG--GFFSIDKYSGIV----------------------VLEQVLDR--- 3208
Query: 74 EREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDR 115
E + ITV A D G+P L + ITV DINDN P+F+R
Sbjct: 3209 EIQPFYQITVCASDQGSPLPLYSLVNVTITVLDINDNPPVFER 3251
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG I Y ++ + +F I+ +GI+ LDR E T
Sbjct: 852 IQVEAIDKDLGPNG-EIVYSLLTS---TTQFGINSTSGILYVAGQLDR-------EFVST 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+++++A RD E+ G+ + S T+KI +ED+ND P+F
Sbjct: 901 FNLKIEA--RDKAEK-------------GSQKFS-VTTLKIILEDVNDCPPLF 937
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+II+ + F++D TG ++T+ LD Y T
Sbjct: 1800 LVIKATDADRNQNA-LLVYQIIEDTA-KMFFTVDSGTGSIRTIANLD----------YET 1847
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
I + V DNGTPQL+ ++T++ D ND+ P F + Y
Sbjct: 1848 CTI---------------FHFHVHVRDNGTPQLTAESPTEVTIQVIDTNDSPPRFTQSSY 1892
>gi|410974955|ref|XP_003993904.1| PREDICTED: protocadherin-15 isoform 8 [Felis catus]
Length = 1788
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 657 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 712
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 713 LVTDVNDNAPVFD 725
>gi|410974953|ref|XP_003993903.1| PREDICTED: protocadherin-15 isoform 7 [Felis catus]
Length = 1786
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 657 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 712
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 713 LVTDVNDNAPVFD 725
>gi|355691678|gb|EHH26863.1| hypothetical protein EGK_16935 [Macaca mulatta]
Length = 772
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E+++ + A D G P+L+ + ITV D+NDN P+FDR Y
Sbjct: 201 DREKTPELHLLLTATDGGKPELTGTVQLLITVLDVNDNAPVFDRTLY 247
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 414 DRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFTQSEY 460
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 4 HATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+A+D+D NG I + +P ++KF +D +G + + +D ++ K
Sbjct: 265 NASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPVSGAITVIGHMDFEESRAHK------- 317
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I V A D G P L+ CT+ + V D+NDN P
Sbjct: 318 ------------------IPVEAVDKGFPPLAGHCTVLVEVVDVNDNAP 348
>gi|75071591|sp|Q6KEQ9.1|PC11X_PIG RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the X chromosome;
Short=PCDH-X; Flags: Precursor
gi|48146998|emb|CAD92443.1| protocadherin [Sus scrofa]
Length = 1117
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A D D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISAMDADSGRNA-EINYLLGFDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI ++++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 TIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 ITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|41223227|emb|CAD92415.1| protocadherin [Homo sapiens]
Length = 787
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 307 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 221 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 279
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 280 NDNAPVF 286
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M A D DP +G +QY + + G A FSID ETG ++T+ LDR
Sbjct: 1047 MTAAAQDPDPGRDG-ELQYFLREGTG-LATFSIDHETGTIRTVGPLDR------------ 1092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ER ++TV+A D G+ LS + I V D+NDN P R
Sbjct: 1093 -------------ERTPHYWLTVLAVDLGSVPLSAVTEVFIEVTDVNDNPPQMSR 1134
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D S+ G + + II + F+ID TG++ T LDR
Sbjct: 1152 LQLDAWDQDS-SSKGKLTFHIISG-NQHGNFAIDPITGLLSTSRQLDR------------ 1197
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + E + V DNG P L + I V D+NDN P F
Sbjct: 1198 -------------ENKAEHILEVAVMDNGEPGLQSTSRVVIQVLDVNDNHPAF 1237
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 26/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D S+G + +S+ E+ V L+A+DR+ +IT
Sbjct: 2813 IQVTANDQDTGSDG-------------QVTYSLAAESDWVGELFAIDRESG------WIT 2853
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + D E + V+A D+G T QLS +++TV D NDN P F Y
Sbjct: 2854 TRKEL------DCEARETYQFHVVASDHGRTIQLSSQALVEVTVSDENDNAPRFTSEVY 2906
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 29/110 (26%)
Query: 11 PSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
P +G GT+ Y II KF++D + G + TL LDR++
Sbjct: 2503 PDDGPYGTVDYIIINKLASE-KFAVDAK-GRITTLQELDREN------------------ 2542
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ I I ++A D G CT+KI + D+NDN P F +Y
Sbjct: 2543 -----STERVIAIKIMARDGGGK--VAFCTVKIILTDVNDNPPQFKASEY 2585
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++TV A DNG P L + I V D+NDN P F ++ Y
Sbjct: 3380 DWEETPSYHLTVRATDNGQPALWRDGAVSIHVADVNDNPPRFFQLNY 3426
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E Y+++ G LSD T+ I V D+ND+EP F + Y
Sbjct: 3275 DFEVSHEHYLSIECSRKGASSLSDVMTVVINVTDVNDHEPKFTQELY 3321
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+++ + V DN +P T+++ VED NDN P F+ + Y
Sbjct: 2024 DREQQETHEVAVEVRDNRSPPRVARATVRVRVEDANDNRPTFENLPY 2070
>gi|270288727|ref|NP_001161833.1| protocadherin-11 X-linked isoform f precursor [Homo sapiens]
gi|61814239|gb|AAX56125.1| protocadherin 11X isoform 5 [Homo sapiens]
Length = 1065
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|41223223|emb|CAD92413.1| protocadherin [Homo sapiens]
Length = 841
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 307 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 221 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 279
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 280 NDNAPVF 286
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|410974943|ref|XP_003993898.1| PREDICTED: protocadherin-15 isoform 2 [Felis catus]
Length = 1793
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ +
Sbjct: 662 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIVTASDGRPDGTSTATVNV 717
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 718 LVTDVNDNAPVFD 730
>gi|391333242|ref|XP_003741028.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Metaseiulus occidentalis]
Length = 2673
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 28/119 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D N ++Y + FSID +G+V+T LDR
Sbjct: 802 VQVSALDEDQGLNA-QVRYTFTGGDDGQGAFSIDPTSGLVRTAKQLDR------------ 848
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF--DRVQ 117
E ++ +A D G+PQ+S + + VEDIND+ P F DR+Q
Sbjct: 849 -------------EAVATYHLKAVAVDRGSPQMSTTVPITVFVEDINDSPPRFDSDRIQ 894
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 39 IVKTLYALDRDDPEREKEIYITTD---IRVQALDRDDPEREKEIYITVIAEDNGTPQLSD 95
I +L +D D + +YI D IR++ L D E + VIA DNG PQ S
Sbjct: 502 ITYSLLTVDGSDSD-TLPVYIEPDTGYIRIRTLL--DHENRTDYKFFVIARDNGKPQRSA 558
Query: 96 ACTMKITVEDINDNEPMFDRVQY 118
T+ + V+D+NDN+P F++ Y
Sbjct: 559 TATVVLQVQDVNDNDPTFEQKSY 581
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + A+D+G P LSD+ +++I V D+NDN P F Y
Sbjct: 741 DRESVSGYTLVITAQDDGRPPLSDSTSVEIEVIDVNDNAPKFAMASY 787
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID TG ++ + LD + T
Sbjct: 383 RIEATDADENENAA-LRYSIIGG-NTQGHFSIDPLTGSIRAVSPLDYE---------TLT 431
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ R+ A +D G+P S+ + + V DINDN+P F ++
Sbjct: 432 NYRLVAR----------------VQDGGSPSRSNTTNVLVNVLDINDNDPRFYATEF 472
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDMGPNG-TVKYSI--SAGDRSRFQIHAKSGVISTKMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + +TV D DN P+F + Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T +LDR+ E+ Y
Sbjct: 607 ATDRDLGDNG-TVRFSLQEAENDQRLFRLDPVSGRLSTASSLDRE----EQAFYC----- 656
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D G+P S + +++ DINDN P+F VQY
Sbjct: 657 ----------------LSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 694
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q A D D NG + Y + + P + F+I+++ G + L ALD + EI
Sbjct: 914 QAKAVDPDEGVNG-RVLYSLKQNP--KNLFTINEQNGNISLLGALDVHAGSYQVEI---- 966
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 ----------------------VASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISY 1001
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN 3612
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + +LDR
Sbjct: 2174 IQVSAADNDEGTNG-QVRYGIVGG-NTHQEFRIDSVTGAITVAKSLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+ +D+CT+ IT+ D+ND P+F+ Y
Sbjct: 2220 -------------ETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPY 2264
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y I+K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDEGSNG-LIHYSILKGNEER-QFAIDSFSGQVTLVGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPK 1317
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMY 2159
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ + + F+I+ TG ++++ LDR
Sbjct: 2690 LTVSATDKDSGPNG-QLDYEIVNG-NQESSFTINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I++ D NDN P F ++
Sbjct: 2736 -------------EKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQI 2778
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRV- 65
V+ P N GT+ I++ D + G L Y L + + + + ++RV
Sbjct: 2266 VNVPENLGTLPRAILQVVAR------DDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVT 2319
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E + V A D G+P L+ T+ I V+DINDN P F Y
Sbjct: 2320 QSLDR---EARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMY 2369
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTSGLDR-------------- 3472
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 3473 -----------ESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL 3512
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I Y II E F+I+ TG+V ALD + + +
Sbjct: 3113 VSARDRDTAMNG-LISYNIISG-NEEGIFAINSSTGVVTLAKALDYEMSSKHE------- 3163
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ ++V D+NDN P+F
Sbjct: 3164 ------------------MTISATDGGWVARTGYCSLTVSVIDVNDNSPVF 3196
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY 1105
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P E DR+ R + + TV A D
Sbjct: 1124 AVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 RGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F ++ ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDLGLNG-TVRYSI--SAGDRSRFQVNAQSGVISTRMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A D G Q + + ITV D DN P+F + Y
Sbjct: 760 -----------------QLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAY 798
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS++ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATNYFSLNT-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++VI D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T+ +LDR+ E+ Y
Sbjct: 607 ATDRDLGDNG-TVRFSLQEAETDQRSFRLDPVSGRLSTVASLDRE----EQAFY------ 655
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ D+NDN P+F VQY
Sbjct: 656 ---------------SLLVLATDLGSPPQSSMARINVSLLDVNDNSPVFYPVQY 694
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 964 IEILASDMGVPQLSSSFVLTVYVHDVNDNPPVFDQLSY 1001
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y +IK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSVIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGAVPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D D +NG ++Y II + +F ID TG + LDR
Sbjct: 2174 IQVYAADGDEGTNG-QVRYGIIDGNANQ-EFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ +TV A D G+ +D T+ I + DIND PMF+ Y
Sbjct: 2220 -------------EKTPTYSLTVQATDRGSTPRTDTTTVNIVLLDINDFVPMFELSPY 2264
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV-Q 66
V+ P N GT+ I++ D + K Y L + + + + ++RV Q
Sbjct: 2266 VNVPENLGTLPRTILQVVARD-----DDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQ 2320
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E + + V A D+G+P L+ T+ + ++D+NDN P F Y
Sbjct: 2321 SLDR---ETKAHFVLMVTATDSGSPALTGTGTINVIIDDVNDNVPTFASKMY 2369
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 32/117 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V+A+D D +N +I+ G ++F+I+ TG + T LDR
Sbjct: 2386 VNASDADASTNA------VIRIIGGNSQFTINPSTGQIITSALLDR-------------- 2425
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E ++ + V++ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -----------ETKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSVPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY +TV+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V+ D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVRLTGELDREEVSNYTLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFMQALY 2159
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + F+I+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNKEHS-FTINHATGEIRSIRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ + +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSQYVLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFSQI 2776
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
+IDK+ G + Y+ + P+ E + DR+ R++ + TVIA D
Sbjct: 1124 AIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQRGTAVFSFTVIAVD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 QGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQALDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|262263232|tpg|DAA06609.1| TPA_inf: protocadherin gamma b7 isoform [Anolis carolinensis]
Length = 940
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E IT+IA D G+P LS T+ + + D+NDN P FD+ +
Sbjct: 413 DRERTSEYNITIIATDKGSPPLSTLKTISLKISDVNDNAPAFDKSSF 459
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 42 TLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
TL +R D + E+ + + LDR E+E+ I++ + A D G P+ S ++I
Sbjct: 181 TLEVRERKDGNKYAELVLQ-----KPLDR---EKEQTIHLILTALDGGEPRKSGTAQIQI 232
Query: 102 TVEDINDNEPMF 113
V D NDN P+F
Sbjct: 233 NVTDANDNPPIF 244
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E +E + + A+D G+P LS T+++ + D NDN P
Sbjct: 523 DYEEFREFQLQIKAQDGGSPPLSSNATIRVFILDQNDNSP 562
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDMGPNG-TVKYSI--SAGDRSRFQIHAKSGVISTKMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + +TV D DN P+F + Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T +LDR+ E+ Y
Sbjct: 607 ATDRDLGDNG-TVRFSLQEAENDQRLFRLDPVSGRLSTASSLDRE----EQAFYC----- 656
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D G+P S + +++ DINDN P+F VQY
Sbjct: 657 ----------------LSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 694
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q A D D NG + Y + + P + F+I+++ G + L ALD + EI
Sbjct: 914 QAKAVDPDEGVNG-RVLYSLKQNP--KNLFTINEQNGNISLLGALDVHAGSYQVEI---- 966
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 ----------------------VASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISY 1001
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN 3612
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + +LDR
Sbjct: 2174 IQVSAADNDEGTNG-QVRYGIVGG-NTHQEFRIDSVTGAITVAKSLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+ +D+CT+ IT+ D+ND P+F+ Y
Sbjct: 2220 -------------ETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPY 2264
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y I+K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDEGSNG-LIHYSILKGNEER-QFAIDSFSGQVTLVGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPK 1317
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMY 2159
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ + + F+I+ TG ++++ LDR
Sbjct: 2690 LTVSATDKDSGPNG-QLDYEIVNG-NQESSFTINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I++ D NDN P F ++
Sbjct: 2736 -------------EKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQI 2778
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRV- 65
V+ P N GT+ I++ D + G L Y L + + + + ++RV
Sbjct: 2266 VNVPENLGTLPRAILQVVAR------DDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVT 2319
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E + V A D G+P L+ T+ I V+DINDN P F Y
Sbjct: 2320 QSLDR---EARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMY 2369
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTSGLDR-------------- 3472
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 3473 -----------ESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL 3512
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I Y II E F+I+ TG+V ALD + + +
Sbjct: 3113 VSARDRDTAMNG-LISYNIISG-NEEGIFAINSSTGVVTLAKALDYEMSSKHE------- 3163
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ ++V D+NDN P+F
Sbjct: 3164 ------------------MTISATDGGWVARTGYCSLTVSVIDVNDNSPVF 3196
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY 1105
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P E DR+ R + + TV A D
Sbjct: 1124 AVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 RGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
>gi|119623185|gb|EAX02780.1| hCG1797565, isoform CRA_d [Homo sapiens]
Length = 1115
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|332234692|ref|XP_003266540.1| PREDICTED: protocadherin alpha-11 [Nomascus leucogenys]
Length = 809
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD
Sbjct: 262 IKLNATDRDEGVNGEVTYSLMSIKPTGRPLFTLDQNNGEVRVNGTLDY------------ 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I V A D GTP ++ CT+ + + D NDN P
Sbjct: 310 -------------EENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSP 347
>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
Length = 4539
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D +N +I+ F++D E+G + TL +LDR+
Sbjct: 2811 LRVEAHDADTGANSDLSYSYLIEDAQISNIFALDAESGQISTLVSLDREA---------- 2860
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
RD E +V A D G+P LS +KI+V D NDN P F++ +Y
Sbjct: 2861 ---------RDTYE------FSVTASDRGSPPLSSVTLVKISVTDFNDNPPQFEQDEY 2903
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV AT +D N + Y I + A FS+D E+GI++ LD
Sbjct: 3226 LQVTATSLDTGINA-QMTYTISEDNALLNLETFSMDPESGILRHQKPLDY---------- 3274
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +E +TV+A D G P L+ + T+ I V D ND P+FD+ Y
Sbjct: 3275 ---------------ETVREYSLTVLATDGGEPPLTASATLNINVTDCNDQAPIFDQSVY 3319
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E ++ VIA D+G P LS +++ + D+NDN P FD Y
Sbjct: 2332 RLDHEHYDQLSFLVIATDHGIPPLSSEVRVRVVITDMNDNPPRFDHPAY 2380
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 49/120 (40%), Gaps = 33/120 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
M+V A+D+D YR + E F +D+E+GIV LDR
Sbjct: 3123 MRVSASDLDLG------LYRKVNYALEDNGGLFKMDQESGIVSLNGELDR---------- 3166
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + I+V A D GT +LS A + + V D NDN P F+R Y
Sbjct: 3167 ---------------EAVAQYNISVYAYDQGTVRLSSAAHLIVNVLDENDNPPEFERSVY 3211
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D NG + Y + F+ID TG +KT LD E + +Y
Sbjct: 452 QVHAMDADLADNG-QVSYSLSNV--NSVPFTIDHFTGEIKTKQVLDF---ETMRRVY--- 502
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ V+A D P R + I +K+ ++D NDN+P F++
Sbjct: 503 SLVVRASDWGSPFRRESESI-----------------LKVRLQDQNDNKPQFEK 539
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 44 YALDRDDPER-----EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT 98
Y++ DP+ EK ITT R R D E++ E + V DNG P LS
Sbjct: 1154 YSIVSGDPQGFFSIDEKSGLITTTSR-----RLDREQQAEHILEVRISDNGVPSLSSTTR 1208
Query: 99 MKITVEDINDNEPMFDRVQY 118
+ + V D+ND P F Y
Sbjct: 1209 VVVKVTDVNDLAPQFTESVY 1228
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D+D SN ++Y I++ P F ID TG +KT LD E+
Sbjct: 1766 LVIKASDMDTNSNA-LLRYSIVE-PEAAQLFDIDASTGSLKTKVTLDH-------EVAAV 1816
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ VQ +D+G P S ++TV DIND+ P F +Y
Sbjct: 1817 YEFSVQ------------------VQDSGVPSQSAMTAAQVTVHVMDINDSPPQFSEPEY 1858
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 32/116 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D ++G ++Y +I+ G KF ID+ TG ++ + LD +
Sbjct: 920 LTLTANDLDLGADG-MVRYALIE--GMDDKFEIDRLTGTIRIVNPLDFE----------- 965
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDN--EPMF 113
K++Y I A D TP LS C++ I + D+N+N P+F
Sbjct: 966 ---------------SKQLYNIIARARDRSTPALSTKCSISIEIVDVNENLYPPVF 1006
>gi|410913649|ref|XP_003970301.1| PREDICTED: protocadherin-11 X-linked-like [Takifugu rubripes]
Length = 1231
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D N I Y + P F++D+ +GI+ LDR+ ER Y+
Sbjct: 486 IKLSATDADSGRNAEII-YTL--GPDAPDGFNVDRRSGILSVGKRLDREKQER----YV- 537
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TVIA+DNG+ L T+++ V+D+NDN P F +Y
Sbjct: 538 --------------------FTVIAKDNGSTSLQSNVTIRLIVQDLNDNSPAFTHPEY 575
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 66 QALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q LDR+ +K+ Y+ I ED G P S +++T+ D+NDN P+F
Sbjct: 205 QNLDRE----QKDTYVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIF 249
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R K ++ ++ D E +E I ++A D GTP L+ + + I ++D
Sbjct: 401 DHDVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNVPIF 466
>gi|350595840|ref|XP_003484190.1| PREDICTED: protocadherin-11 X-linked-like [Sus scrofa]
Length = 1026
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A D D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISAMDADSGRNA-EINYLLGFDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI ++++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 AIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 ITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
>gi|297676192|ref|XP_002816026.1| PREDICTED: protocadherin alpha-11 [Pongo abelii]
Length = 810
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD
Sbjct: 262 IKLNATDRDEGVNGEVTFSLMSIKPNGRPLFTLDQNNGEVRVNGTLDY------------ 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I V A D GTP ++ CT+ + + D NDN P
Sbjct: 310 -------------EENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSP 347
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 410 RALDR---ESVSAYELVVTARDGGSPSLLATARVSVEVADVNDNAPAFAQPEY 459
>gi|297295275|ref|XP_002804599.1| PREDICTED: protocadherin alpha-12 isoform 2 [Macaca mulatta]
Length = 1266
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD + E + Y
Sbjct: 262 IKLNATDRDEGVNGELTYSLMSIKPNGRPLFTLDQNNGEVRVNGILDYE----ENKFY-- 315
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+I VQA D+ GTP ++ CT+ + + D NDN P
Sbjct: 316 -NIEVQATDK------------------GTPPMAGHCTVWVEILDTNDNSP 347
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P+F + +Y
Sbjct: 737 ALDR---ESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPVFAQPEY 785
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 411 ALDR---ESVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
>gi|403272515|ref|XP_003928104.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Saimiri
boliviensis boliviensis]
Length = 2899
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 1791 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTNVILDY-------ELTSS 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +KI V DINDN P F
Sbjct: 1842 YSLIVQATDK------------------GMPRLSNTTVIKIQVTDINDNAPAF 1876
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNG--GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VH P G G I Y I+ E F +D+ +G++ T LD
Sbjct: 1167 VHRVTAHDPDEGRNGKITYSILSG-NENMVFMLDESSGLLTTTCPLDY------------ 1213
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ ITV D+ND P+F + Y
Sbjct: 1214 -------------EMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQQLY 1258
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + I ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2147 VLLHSLDREASASHE---IAILASDSGCPPLSATAVISIQVLDVNDNPPNFSSLSY 2199
>gi|432910748|ref|XP_004078505.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3255
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV ATD+D +G I Y I+K G+ FSID +G++ T + DR+ +K Y+
Sbjct: 1419 QVSATDLDSGLHG-MIHYTILKDESGDSQFFSIDSASGVIVTRASFDRE----QKASYL- 1472
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I VQ+ D + R + G P +D ++I + D+NDN P F + Y
Sbjct: 1473 --IEVQSQDSSESARPGQ---------QGQPN-TDTAYVRIFITDVNDNAPAFAQPVY 1518
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D NG ++Y I+ G + F I+ ++G++ T + DR
Sbjct: 1100 LRVQARDADMGLNG-EVKYGIMHRDGVSSGFDINPDSGVITTAVSFDR------------ 1146
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER++E ++V A D L C + + + D NDN+P F+ +Y
Sbjct: 1147 -------------ERQREFTLSVTATDQAEEPLIGICQITVLILDQNDNDPKFENSRY 1191
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A+D+D NG Y I K +F +D ++G V +LDR+ + K
Sbjct: 1969 QVTASDLDSGQNG-HFSYSISKDSDPYNQFLVD-QSGWVVVANSLDREKISQHK------ 2020
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
I V+A D G P L+ + +TV D+NDN P F+
Sbjct: 2021 -------------------IMVLATDAGHPPLTGTAIVMVTVLDVNDNGPEFE 2054
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D ++ ++Y + G +F+ID+ TG
Sbjct: 1636 LEVSATDPDQEADQTALRYSL-HGQGAGGEFTIDEHTG---------------------- 1672
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R+ A R D E V+A D G L+ + + V DINDN P F
Sbjct: 1673 ---RIYAQRRLDREERPAWRFLVLATDEGGAGLTGFADVLLEVRDINDNAPFF 1722
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 32/112 (28%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+H TD D +NG R++ + F++ TD
Sbjct: 2080 LHITDRDTSTNGSPFSVRLLMLTSDATNFNL---------------------------TD 2112
Query: 63 IR-----VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
R + AL D ER+KE + V+ D+G+P +S T+ + + D ND+
Sbjct: 2113 FRNGSAAITALRTFDRERQKEYRLPVLMIDSGSPPMSSTSTLTVVIGDRNDH 2164
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
IT+ V R D ER IY V+A D GTP + +++I V + ND P+F +
Sbjct: 915 ITSGGVVSPAHRLDYERPNHIYEFVVVAVDAGTPPRTGTASIRIRVANSNDEAPVFSQSV 974
Query: 118 Y 118
Y
Sbjct: 975 Y 975
>gi|327270367|ref|XP_003219961.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 818
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E IT+I D GTP LS T+ + + DINDN P F+ Y
Sbjct: 411 DRERKPEYNITIIVTDKGTPPLSSNKTISLQISDINDNSPTFEEKAY 457
>gi|119623183|gb|EAX02778.1| hCG1797565, isoform CRA_b [Homo sapiens]
Length = 1125
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
MQV A D D PP N Q R G+ F I+ TG + L LDR
Sbjct: 2284 MQVKAYDADTPPYND---QVRYFLKEGDTDLFRINASTGDIFLLRPLDR----------- 2329
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +T++A D G+P L+ + +++ V D+ND+ P F+R +Y
Sbjct: 2330 --------------ELVSEYVLTLVAMDTGSPPLTGSGIVRVVVLDVNDHSPEFNRQEY 2374
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D P NG YR+I + S++K +GI+KT +LDR EI
Sbjct: 3514 MTLSATDPDLPPNGAPFFYRLIGGK-QMDLVSLEKHSGILKTTRSLDR-------EIAPQ 3565
Query: 61 TDIRVQALDRDDPEREKEIYITV-IAEDNGTPQLSDACTMKITVEDINDNEPM 112
D+ V+ D P + E ITV + + N +P S ++ + V N P+
Sbjct: 3566 LDLLVEVEDSGSPRQSSEHAITVYVLDQNDSP--SSPRSVHVMVNSFNGQTPL 3616
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ E E + VIA D GTP S T+ +T+ED+NDN P+F Y
Sbjct: 611 LDRESVE---EYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNY 658
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 28/115 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D SNG + Y ++ E F ID+E+G + T LDR++ + I
Sbjct: 2704 KISAKDADSGSNG-EVTYHLMNDFDE--TFVIDEESGEISTNAKLDREEISSYELI---- 2756
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V A D GTPQL+ T+ +TV D NDN P F R+
Sbjct: 2757 ---------------------VEARDRGTPQLTGTATVLVTVLDKNDNPPRFTRL 2790
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 26/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV A D D P I Y +I FS++ TG+ +LD
Sbjct: 1857 QVVANDADAPGPNSQISYALISDWANDV-FSLNPSTGVFTLTASLDY------------- 1902
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E+ + + V A D G P LS T+ V D+NDN P+F+
Sbjct: 1903 ------------EQVQHYILVVQATDGGLPALSSTVTVYCNVVDLNDNTPIFE 1943
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 19/94 (20%)
Query: 25 PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84
P + F +D G +K+++ DR+ ++ ++T +L+ +VI
Sbjct: 1113 PSSQQDFVVDPRNGFIKSMHPFDRE------QLVLSTGSNFISLE-----------ASVI 1155
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG +L D + + + D+NDN P F R+ Y
Sbjct: 1156 --DNGVNRLKDRVKVSVYISDVNDNTPQFKRLPY 1187
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D P NG T Y I+ + AKF + TG +P E T+ +
Sbjct: 122 ATDKDTPENGVTDDYFIVNGNTD-AKFRLSV-TG-----------NPIGE-----TSYLH 163
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + D E+ + ++ V A D G P + +TV D+NDN P+F + Y
Sbjct: 164 LETTGKLDREQVEYYHLNVCARDKGRPPKLGCLMVNVTVLDVNDNPPIFQQSDY 217
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 63 IRVQA-LDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR+ E +Y +T++A D G+P S + I V D+ND+EP+F + +Y
Sbjct: 392 VRVNGKLDRE----EIPMYNLTIVATDKGSPPRSATAYLVIHVNDVNDHEPVFQQSEY 445
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 29/109 (26%)
Query: 11 PSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALD 69
P + GT++Y I+ P + F +D TG ++ ALDR+ KE Y+ +RV+A
Sbjct: 1761 PDSIGTLKYSIVTPPKNSPSPFKLDSSTGQLRLAEALDRE----AKESYV---LRVRA-- 1811
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD + ++ T+ I V D NDN P F Y
Sbjct: 1812 -DDGLQHTDV------------------TLSILVTDTNDNAPSFQATAY 1841
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D NG ++Y + G FS+ G+++ LDR
Sbjct: 2068 MAVKAVDKDEGRNG-YVEYALEFGHGS-LPFSLGAVDGVLRVAGPLDR------------ 2113
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + +IA+D G P S T+++ V D NDN P+FD QY
Sbjct: 2114 -------------EQRANYTLRLIAKDRGEPARSTLQTVQLLVLDENDNSPIFDPRQY 2158
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 31 FSIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+ DK+ G+ + Y+L D ER T +I L+R D E+ ++T++A+D+
Sbjct: 2392 LASDKDEGLNARIRYSLLGDKAERFHVNSSTGEI--VTLERLDREQTAVYHLTLVAQDSS 2449
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + A + ITV D+NDN P F +Y
Sbjct: 2450 PTEPKAAAVNLTITVTDLNDNAPRFASPRY 2479
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ ATD D +N + + I A R F +D TG + LD +D E+Y
Sbjct: 1308 LRFRATDSDLGANS-ELTF-AISAGNRRDAFHVDPATGALYLRKPLDYED----IEVY-- 1359
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ V D G P+LS T+++ V D NDN P+F
Sbjct: 1360 -------------------HLNVTCSDAGHPRLSSVITLRVDVIDTNDNPPVF 1393
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 3 VHATDVDPPSN-GGTIQYRIIKAPGE--RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V T VDP S G + Y I E + +F I+ TG++ TL +DR++ + K + +
Sbjct: 1413 VTVTAVDPDSGDNGVLSYSIASQDPEDQKRRFGINPTTGVIHTLLPIDREEIDTFKLVVV 1472
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+D+ A R + +LS + + V D+NDN P+F
Sbjct: 1473 ASDM---AQPR-------------------SARLSAEKVVIVIVTDVNDNAPIF 1504
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 30/109 (27%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYITTDIRV 65
DV P +N Y II +A F +D ++G ++T LDR+ P E
Sbjct: 3416 DVRPQNN--QFSYSIIGGNVGQA-FKVDPQSGDIETAKFLDRESVPSYE----------- 3461
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ + A D G+P + + T+KI + D+NDN P+FD
Sbjct: 3462 ---------------LIIGAIDTGSPPQTGSATVKIELLDVNDNGPVFD 3495
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D I Y +++ P + F++D +G +I+
Sbjct: 2908 QVVATDRDKQGPNSVISYSLLQ-PSDL--FTVDPASG-----------------DIFSKR 2947
Query: 62 DIRVQALDR-DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R + R PE +Y V+A DNG P LS + +++ D N++ P F++ Y
Sbjct: 2948 TLRYKHTKRPTSPENVYSLY--VVATDNGRPPLSSKTLVYVSIVDSNNHAPRFEQRAY 3003
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEI--- 57
+ ATD D N Y ++ E+ F+ID++TG+V T+ LDR+ E ++
Sbjct: 461 SISATDADSGLNARI--YYDFESGNEQNWFAIDQDTGLVTTVATLDREIQGSVELKVLAR 518
Query: 58 -------YITTDIRVQALDRDD--PEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
Y++T +RV LD +D P+ + I ++E+ TP S T+ D
Sbjct: 519 DGGPNPKYVSTHLRVTILDENDEAPKFSQNIVEVTLSEN--TPANSLVATLSAVDNDQGT 576
Query: 109 N 109
N
Sbjct: 577 N 577
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I R F+I ++ G+++ L+ + R +
Sbjct: 2173 LQVSALDRDEGANG-RVRYSIAAGDDNR-DFTISEDAGVIRVAKNLNFERKARYR----- 2225
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++VQA D A + G L DA + I + DINDN P+F
Sbjct: 2226 --LQVQAED--------------CAPELGGEALVDAAEVVINLLDINDNAPVF 2262
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG ++Y + FSI+ TG++ LD
Sbjct: 1211 QVAATDADDSSNG-DVRYAL---SDNTDVFSINTSTGLITLKTQLDY------------- 1253
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + +TV A+D GTP S +K+ V+D+NDN P F + Y
Sbjct: 1254 ------------EKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLY 1298
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 29/108 (26%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
VDP GG + YRI+ + +F+ID TG++ LDR++ T D+ +Q
Sbjct: 2352 VDPDLGTGGVVSYRILT---RQTEFTIDNTTGVITLAQPLDRENKS-------TYDLAIQ 2401
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
A D+GTP + + T+++TV DIND+ P+ +
Sbjct: 2402 A------------------RDHGTPPQASSITIRVTVIDINDHRPLIN 2431
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D +NG + + IIK + F+ID TGI+ + D ++ R
Sbjct: 1001 IQVSATDRDSSTNGALV-FGIIKG-NDDGVFTIDGSTGIISIAKSPDYENKTRY------ 1052
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ VQA DR G P D + I +ED+ND+ P+F Y
Sbjct: 1053 -DLTVQARDR------------------GVPVKYDTAQVTIFIEDVNDHSPVFSPSNY 1091
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + Y + + G+ +KF ++ TG+V T LDR+D
Sbjct: 1728 KVTATDRDEGENA-KVTYEL--SVGDTSKFEVNPATGLVTTKRPLDRED----------- 1773
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + V A D+G P S + +T+ D+NDN P F + +Y
Sbjct: 1774 --------------QASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKY 1816
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ A D+D N + Y ++ G+ + F++D + G+++T A DR
Sbjct: 794 QLTAVDLDVGINA-RLSYSLVS--GDTSYFTVDSQ-GVIRTKGAFDR------------- 836
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S T++I + D+NDN P+F QY
Sbjct: 837 ------------ETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQY 881
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D NG + Y II + F +D +GI+ LDR
Sbjct: 1418 QLTATDRDIGPNGA-VTYAIISG-NQGNSFQLDPRSGILSVRSTLDR------------- 1462
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A D G+PQ S ++ ++V D+NDN P F++ +
Sbjct: 1463 ------------ETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLF 1507
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D + G++ Y I+ + KFSID+ +GI+ T LDR
Sbjct: 2142 VKVSASDRD---SFGSLSYSIVGGK-DSDKFSIDQRSGIISTADVLDR------------ 2185
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
E I V D G P LS+ + I + D NDN P FD
Sbjct: 2186 -------------ELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFD 2226
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG I Y I+ E F++D+ TG + T LDR
Sbjct: 1315 VTATDADSGANG-KISYSILSG-NENMAFAMDRFTGEITTRVPLDR-------------- 1358
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +T+ A+D + A T+ I++ D NDN+P F
Sbjct: 1359 -----------ETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTF 1398
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D +NG + Y II A F ID TG + + +DR
Sbjct: 1831 LRVLASDPDAGANG-RVTYSIISGNHGNA-FRIDSTTGRITVVGVVDR------------ 1876
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +T+ A+D+G P + ITV D NDN P+F
Sbjct: 1877 -------------EALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIF 1916
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D SN + Y I++ G+ + F+I+ G++ +KEI
Sbjct: 1938 VTATDRDEGSNA-QVFYSIVR--GDTSAFAINAMNGVLTV-----------KKEI----- 1978
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ E +T+ A D G+P ++ + + V D+NDN P+F+ Y
Sbjct: 1979 ---------NRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSY 2025
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ + + D G+P L+D + I V DINDN P+F Y
Sbjct: 940 DFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAY 986
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E +TV A D G+P S +KIT+ ++NDN P F
Sbjct: 1564 DYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSF 1605
>gi|14589918|ref|NP_116749.1| protocadherin-11 X-linked isoform b precursor [Homo sapiens]
gi|10803413|emb|CAC13123.1| protocadherin [Homo sapiens]
Length = 1025
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|7657443|ref|NP_055337.1| protocadherin-11 X-linked isoform a precursor [Homo sapiens]
gi|6978935|dbj|BAA90765.1| protocadherin-Xa [Homo sapiens]
Length = 1021
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 612 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 646
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 647 DGGRVSRSSSAKVTINVVDVNDNKPVF 673
>gi|426229345|ref|XP_004008751.1| PREDICTED: cadherin-related family member 2 isoform 2 [Ovis aries]
Length = 1279
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ + FS+D + GI++ L LDR+
Sbjct: 607 IQAHDND-QPDTNNSLLHFSLLPSLYSH-NFSVDPDKGILRNLGPLDREAI--------- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+P I ++V D+G P L ++ ITVEDINDN P+F++ +Y
Sbjct: 656 -----------NPTLGGRIVLSVNVSDSGEPALWTTVSVTITVEDINDNLPIFNQSRY 702
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 33/113 (29%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA+D D GG + Y ++ PG A F++D ++G
Sbjct: 505 IHASDPDT-GEGGHVTYSLL--PGNGADIFAVDPDSG----------------------- 538
Query: 62 DIRVQALDRDDPEREKEI--YITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
RV DR+ +REK+ Y+T+ A D G LS + T++I V D+NDN P+
Sbjct: 539 --RVTVRDRELLDREKQAVYYLTLQATDGG--NLSSSTTLQIHVLDVNDNSPV 587
>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
Length = 5168
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G F I+ TG + L LDR
Sbjct: 2413 LTVTAFDADTPPLNN---QVRYFLKEGNADLFRINASTGDIVLLGTLDR----------- 2458
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +T++A D G+P LS+ +++ V+DINDN P+F+ +QY
Sbjct: 2459 --------------ELQNEYILTLVAMDTGSPPLSNTGIVRVEVQDINDNGPVFE-LQY 2502
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 15/94 (15%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPER------EKEIYITVI 84
F ID G +KTL DR+ R + D ER I + I
Sbjct: 1206 FKIDTHNGFIKTLRPFDREALVRSTG---------NSASVGDEERNISSGGSNYILLEAI 1256
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P L D +K+ + D+NDN P F R Y
Sbjct: 1257 VTDNGIPPLHDKVKVKVIITDVNDNAPEFLRTPY 1290
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ +IA D GTP LS ++ + + D+ND+ P+FD Y
Sbjct: 1022 FYVEIIATDGGTPSLSSRLSLPVNIADVNDHTPVFDHTSY 1061
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 80 YITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
YI ++ A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 2018 YILLVQAQDNGQPSLSTTITVYCNVLDLNDNTPLFDPMSY 2057
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D I Y + ++P FS+D TG EI+ T
Sbjct: 3041 QIIATDRDKQGPNSVISYSL-QSPS--PIFSVDPATG-----------------EIFSKT 3080
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ + + E +T++A DNG P L C + I + D N+N P F+ +Y
Sbjct: 3081 QIQYKH-SQYISSPENMFALTILATDNGKPPLYTECLVNINIVDANNNPPKFEHTEY 3136
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P NG Y+I+ +A F+IDK TG+V++ + DR+
Sbjct: 3679 ITLAASDPDLPHNGAPFSYKIVGGK-HKAWFTIDKYTGLVRSTASYDRE----------- 3726
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
P E I + ED+G+P+ + I V D NDN
Sbjct: 3727 ----------ATPLLEAIIEV----EDSGSPKQQSQHKLVIKVLDQNDN 3761
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP+ + I V D+ND+EP+F++ +Y
Sbjct: 460 VRVNGVLDREEISKYN---LTVVAIDKGTPERKAIAYLIIDVNDVNDHEPVFEKSEY 513
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + + I ER F++++ TG +
Sbjct: 3257 ITVSATDKDTGPNG--MLHYAISGGNERNYFNVNERTGAI-------------------- 3294
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I +Q LD D +E ++ + +D G L+ + I + D+NDN P+F++ +Y
Sbjct: 3295 --IIMQPLDYD---LMQEYHLNISVKDLGYKALTALAMLTIILTDVNDNPPVFNQSEY 3347
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 33/114 (28%)
Query: 8 VDPPSNG--GTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
D P +G G + Y I + E A F I+ +TG++ TL +DR
Sbjct: 1520 ADDPDSGVNGKVTYVISRQEPETAGGRHFGINTQTGVIYTLREIDR-------------- 1565
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMF 113
+A+D +TV+A D P QL+ + + VED+NDN P+F
Sbjct: 1566 ---EAID--------NFRLTVVATDQAQPSDRQLATEKLVTVIVEDVNDNAPIF 1608
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T Y I+ ++D + +V T +P + T+ +
Sbjct: 188 ATDADIGDNGVTDHYEIVAG-------NLDNKFRLVTT------TNPSGD-----TSYLH 229
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 230 LETTGNLDRESRGSYQLNISASDGGSPPRLGFLQVNVTILDVNDNPPIFDHSDY 283
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
DV P +N T Y II + F ID ETG + T LDR+D
Sbjct: 3581 DVRPQNNQFT--YSIING-NIKQSFKIDAETGEISTAVLLDREDIAYYN----------- 3626
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + A D G P + T++I ++DINDN P F
Sbjct: 3627 --------------LVIGAIDTGLPPQTGTATVRIDLDDINDNGPTF 3659
>gi|195354340|ref|XP_002043656.1| GM19748 [Drosophila sechellia]
gi|194127824|gb|EDW49867.1| GM19748 [Drosophila sechellia]
Length = 1591
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 28/112 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D+DP TI Y I+ F ID +TG++KT ER+
Sbjct: 423 DIDPTQ---TITYNIVSG-NLVGYFEIDSKTGVIKT--------TERK------------ 458
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + E + V DNG+P LS + ++V DINDN P FD+ Y
Sbjct: 459 -LDR---ENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVY 506
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D N + Y + E + F+++ TG ++ LDR
Sbjct: 101 LHATDADSGINA-QVTYAL---SVECSDFTVNATTGCIRLNKPLDR-------------- 142
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + A+D G P LS + + V+D+NDN P+F +Y
Sbjct: 143 -----------EKQDNYALHITAKDGGNPMLSSEALVYVLVDDVNDNAPVFGVQEY 187
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITV 103
+++ R DP+R + +Q + D ER+ E + + D G P S + + IT+
Sbjct: 19 FSVFRIDPDRGE---------LQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITI 69
Query: 104 EDINDNEPMFDR 115
D+NDN P+ +
Sbjct: 70 LDVNDNRPVIQK 81
>gi|62510905|sp|Q5DRF3.1|PCDAB_PANTR RecName: Full=Protocadherin alpha-11; Short=PCDH-alpha-11; Flags:
Precursor
Length = 949
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + V A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNGKQIKRLSLILKKSLDR---EKTPELNLMVTATDGGKPELTGTVRLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPDFDKSEY 247
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD
Sbjct: 262 LKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDY------------ 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I V A D GTP ++ CT+ + + D NDN P
Sbjct: 310 -------------EENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSP 347
>gi|260795106|ref|XP_002592547.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
gi|229277768|gb|EEN48558.1| hypothetical protein BRAFLDRAFT_133692 [Branchiostoma floridae]
Length = 1894
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D N I Y I A + F ID +G+V+T ALDR++ +
Sbjct: 1595 VQVVASDDDADENA-EITYSITSA-SQPGHFEIDGASGVVRTAQALDRENID-------- 1644
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV A DNG P ++ T+ IT++D NDN P FD Y
Sbjct: 1645 -----------------SYTLTVQATDNGVPSFNNDTTVTITIDDENDNTPAFDSNLY 1685
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG + Y I+ G A F I+ TG++ T +DR+
Sbjct: 1386 VEATDPDLNGNG-EVTYSIVSGDG-MAYFDINSTTGLISTSADVDRE------------- 1430
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
AL+ + V A D+GTP S C +K+ + D+NDN P F ++Y
Sbjct: 1431 --TLALNN----------LVVQATDSGTPAKSSLCRVKVYLNDLNDNTPSFVPLEY 1474
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 24/113 (21%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D + G + + I+ + F ID TG++ T LDR EI +
Sbjct: 107 QVSATDGDV-NEVGDVTFSIVSG-NDGDVFGIDFLTGVISTATVLDR-------EIANSY 157
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ VQA D D R + T T+ ITVED+NDN PMFD
Sbjct: 158 ALEVQARDGGDSLRTYQTSTT---------------TVDITVEDVNDNNPMFD 195
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E E I +D+GTP L T++ITV D+NDN P+F+
Sbjct: 1745 DRETIAEYSIICRVQDSGTPSLFSDVTVQITVSDVNDNAPIFN 1787
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D +N + + I++ + +F+ID TG ++T LDR+ E
Sbjct: 1491 VQALDPDESTNA-LLTFAILEG-DDNNEFAIDSSTGTIRTASTLDRESIE---------- 1538
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
+T+ A D GTP L+ + T+ +T+ D+NDN P+ + Y
Sbjct: 1539 ---------------SYTLTITATDGGTPTNLTGSGTVLVTILDVNDNTPVLTQASY 1580
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 25/112 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q++ TD D +NG I + +I A + KF++D+ +G ++T+ DR++ + +
Sbjct: 637 LQLNCTDADADANG-EISF-VISAGNDEGKFAVDRTSGTLRTVGNFDRENNPDYTLVLLA 694
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
TD +P R L+ + T+ ITV D+NDN P+
Sbjct: 695 TDW------GQNPGR-----------------LTGSSTVYITVTDVNDNAPV 723
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D +G T+ Y I + E+ KF I++ TG + LDR+ + +
Sbjct: 1063 ISVTAVDSDSGPDG-TVVYSIEEGNSEQ-KFVIEENTGELSVALPLDREYTD-------S 1113
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V+A+D + N + LS+ T+ IT+ED+NDN P+F
Sbjct: 1114 YTLTVKAMD---------------SPSNSSQALSNFTTVNITLEDVNDNHPIF 1151
>gi|41223225|emb|CAD92414.1| protocadherin [Homo sapiens]
Length = 762
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 307 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 350
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 351 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 395
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 27 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 69
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 221 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 279
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 280 NDNAPVF 286
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 25/87 (28%)
Query: 27 ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86
E F+ID +TG+++ + DR E+++ V AE
Sbjct: 432 ENDDFTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAE 466
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMF 113
D G S + + I V D+NDN+P+F
Sbjct: 467 DGGRVSRSSSAKVTINVVDVNDNKPVF 493
>gi|358341759|dbj|GAA49354.1| protocadherin-11 X-linked [Clonorchis sinensis]
Length = 1510
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D +N Y++I+ F ID +TG + T + DR
Sbjct: 648 AVDSDTGANADVF-YQLIENGMNATTFKIDPKTGTITTTVSFDR---------------- 690
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A+D + +A D+G P L+ T+KITV D+NDN P F V+Y
Sbjct: 691 -EAVD--------HYTLYALAIDHGIPPLTSTSTVKITVLDVNDNAPQFGSVEY 735
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD+D G I Y + + F IDK TG+++ ALDR+ R Y+ T
Sbjct: 751 QVTATDLDSDIYG-PIHY-FVGDESDATNFRIDKMTGVIRCRQALDREKQAR----YVFT 804
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
L +D + GT CT+ + ++D NDN P+F
Sbjct: 805 -----VLAKDTNVHSSNSKSLSSLQLTGT------CTVTVLIDDENDNWPVF 845
>gi|344272257|ref|XP_003407951.1| PREDICTED: cadherin-6 [Loxodonta africana]
Length = 790
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ ++ + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYHVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAVNRKTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEP+F + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPIFTKEVY 164
>gi|119623182|gb|EAX02777.1| hCG1797565, isoform CRA_a [Homo sapiens]
Length = 1021
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>gi|47225228|emb|CAG09728.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1210
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ ATD D N I Y + P F++D+ +G++ LDR
Sbjct: 456 IKLSATDADSEHNAEII-YTL--GPDAPEGFNVDRRSGVLSVGKRLDR------------ 500
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ TVIA+DNG+ L T+K+ V+D+NDN P F +Y
Sbjct: 501 -------------EKQDRYAFTVIAKDNGSTSLQSNVTVKLIVQDLNDNSPAFTHPEY 545
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 66 QALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
Q LDR+ +K+ Y+ I ED G P S +++T+ D+NDN P+F
Sbjct: 175 QNLDRE----QKDTYVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIF 219
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D D P R K ++ ++ D E +E I ++A D GTP L+ + + I ++D
Sbjct: 371 DHDVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDE 429
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 430 NDNVPIF 436
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 30/115 (26%)
Query: 2 QVHATDVDPPSNGGTIQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q+HATD D SN I + + G + FSID TG++ +LDR+ K I +
Sbjct: 240 QLHATDADLGSNA-QIHFTFSNQISAGTKRHFSIDGSTGLITVKQSLDRELTPVHKLIVL 298
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+D P R T+ + V D+NDN P D
Sbjct: 299 ASD------GSSTPSR---------------------ATVIVNVTDVNDNVPTID 326
>gi|405970495|gb|EKC35393.1| Protocadherin-like wing polarity protein stan [Crassostrea gigas]
Length = 1109
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D + G +QY+I+K E + + ID TGI+ LD + E
Sbjct: 24 KVSAEDPDMEGSNGEVQYKIVKG-NENSHYKIDASTGIITLALPLDYESQRTEL------ 76
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++V+A D G+P+LS+ CT+ + + D ND P F
Sbjct: 77 -LQVEAFDL------------------GSPRLSNVCTVTVQILDKNDETPTF 109
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 30/139 (21%)
Query: 1 MQVHATDVDPP--SNGGTIQYRIIKAPGERAKF-------SIDKETGIVKTL---YALDR 48
+QV A D+ P SN T+ +I+ E F S+ ++T + +T+ YA D+
Sbjct: 77 LQVEAFDLGSPRLSNVCTVTVQILDKNDETPTFLSLKLKESVSEDTLVGQTITQVYAYDK 136
Query: 49 DDP--EREKEIYITTD------------IRVQA-LDRDDPEREKEIYITVIAEDNGTPQL 93
D +Y +T +RV LDR+ ER E+ IT I DNG+PQL
Sbjct: 137 DSSVDNNNMVVYKSTSNVPFIVDSFSGAVRVSNILDREKAER-YEMIITAI--DNGSPQL 193
Query: 94 SDACTMKITVEDINDNEPM 112
+ T++I + D+NDN+P+
Sbjct: 194 TGTLTLEIDITDVNDNDPI 212
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ +T+IA DNG P LS + I +ED+NDN P+F + Y
Sbjct: 493 DREVDQRFTLTIIAMDNGVPSLSSEVKVNIQIEDVNDNPPVFSPLFY 539
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D GTP LS T+ I + DINDN P+F R Y
Sbjct: 397 KDGGTPFLSSDVTVNIKLTDINDNAPVFRRPFY 429
>gi|348507537|ref|XP_003441312.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Oreochromis niloticus]
Length = 3017
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 812 ISATDEDTGENARITYFMDDSIP----QFDIDPDTGAVTTQMELDYED------------ 855
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 856 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHY 898
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ A DVD G ++Y I R+ F++D +G V T+ LDR+ T
Sbjct: 283 LKAVDVDE-GEAGRLEYFIEALFDSRSNHLFAVDPSSGAVSTVEVLDRE----------T 331
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D V V A D+GTP+ + T+ ITV D ND+ P+F++ Y
Sbjct: 332 KDTHV---------------FRVTAVDHGTPRRTAMATLTITVSDTNDHSPVFEQQDY 374
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +GIV+TL LDR++ + I
Sbjct: 913 VQVSATDRDSGLNG-RVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDREN------VPIY 965
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + A D G P L +++T+ D+NDN P+F++ ++
Sbjct: 966 T-------------------LQAFAVDKGIPALKTPVNIQVTILDVNDNPPVFEKDEF 1004
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN + + I+ R +F ID +TG + + LD
Sbjct: 497 LQVTATDQDRGSNA-VVHFSIMSG-NTRGQFYIDAQTGKMDLVSHLDY------------ 542
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E KE + + A+D G P LS+ + + V D+NDN P+F
Sbjct: 543 -------------EANKEYTLRIRAQDGGRPPLSNISGLVTVQVLDVNDNAPIF 583
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 24/118 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D P NG I Y I+ G F ID +G+++T +DR+ E E Y+
Sbjct: 389 LTVRATDGDAPING-NILYNILNNNGSNDVFEIDSRSGVIRTKGLVDRE----EVEAYM- 442
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D+ D G P+ S T+ I VED NDN P F +Y
Sbjct: 443 --LLVEANDQ--------------GRDPG-PR-SATATVHIVVEDDNDNAPQFSEKRY 482
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D N ++YR+ + FSI+ TG + LDR+ +
Sbjct: 603 IHIQAVDADSGENS-RLEYRLTETT-PNFPFSINNSTGWIVVADELDRESVDFYN----- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+G P +S + ++ +T+ D+NDN P F + Y
Sbjct: 656 --------------------FGVEARDHGYPVMSSSASISMTILDVNDNNPEFTQKAY 693
>gi|74149744|dbj|BAE43865.1| Protocadherin alpha [Macaca fuscata]
Length = 949
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD + E + Y
Sbjct: 262 IKLNATDRDEGVNGELTYSLMSIKPNGRPLFTLDQNNGEVRVNGILDYE----ENKFY-- 315
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+I VQA D+ GTP ++ CT+ + + D NDN P
Sbjct: 316 -NIEVQATDK------------------GTPPMAGHCTVWVEILDTNDNSP 347
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 411 ALDR---ESVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
>gi|312089274|ref|XP_003146183.1| hypothetical protein LOAG_10612 [Loa loa]
gi|307758652|gb|EFO17886.1| hypothetical protein LOAG_10612 [Loa loa]
Length = 542
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E++ + ++ + AED G P+ +D CT++ITV D NDN P+F
Sbjct: 21 DYEQQSQYFLVITAEDQGIPKRADTCTLRITVTDENDNVPVF 62
>gi|297295277|ref|XP_001088965.2| PREDICTED: protocadherin alpha-12 isoform 1 [Macaca mulatta]
Length = 949
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNSKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVQLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD + E + Y
Sbjct: 262 IKLNATDRDEGVNGELTYSLMSIKPNGRPLFTLDQNNGEVRVNGILDYE----ENKFY-- 315
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+I VQA D+ GTP ++ CT+ + + D NDN P
Sbjct: 316 -NIEVQATDK------------------GTPPMAGHCTVWVEILDTNDNSP 347
Score = 34.7 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 411 ALDR---ESVSAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
>gi|262263247|tpg|DAA06624.1| TPA_inf: protocadherin gamma b22 isoform [Anolis carolinensis]
Length = 938
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ E IT+I D GTP LS T+ + + DINDN P F+ Y
Sbjct: 411 DRERKPEYNITIIVTDKGTPPLSSNKTISLQISDINDNSPTFEEKAY 457
>gi|119623184|gb|EAX02779.1| hCG1797565, isoform CRA_c [Homo sapiens]
Length = 1045
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 516 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|291225882|ref|XP_002732927.1| PREDICTED: fat-like, partial [Saccoglossus kowalevskii]
Length = 4229
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 67 ALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++D D KE+Y + +IAED G+P S T+K+ V DINDN P+F+ +Y
Sbjct: 2874 SVDGDIDRENKEMYDLLLIAEDGGSPSRSTNSTLKVNVLDINDNSPVFNETRY 2926
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D +NG + Y I+ G F ID+ +G + +LD ++
Sbjct: 669 MVTATDKDEGTNGEVVSYAIMDGDG---TFGIDETSGEISVNRSLDFEN----------- 714
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+KE TV+A D G PQ + + ++ I++ + ND EP F Y
Sbjct: 715 -------------GDKEFRFTVVAHDGGLPQQNGSVSIVISINNTNDEEPAFSVSTY 758
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
VHATD+D SNG + Y II FS++ +TG + L
Sbjct: 1218 SVHATDIDDGSNGEILSYDIING---DDTFSMNNQTGNLMLTSVL--------------- 1259
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP + +TV A D G+ + + + +T+ D+N+N P+F Y
Sbjct: 1260 ----------DPSLNSKFTLTVSAMDGGSIPKTGSTVIIVTITDVNNNIPVFLSSNY 1306
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D D +NG + Y + P + FSID TG++ L +LDR+ P
Sbjct: 2510 FSVIADDDDEGANGDVV-YGLSSFP---SLFSIDNVTGMIFGLASLDREAP--------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++ E E+ +T AED G L+ + + V+DINDN P+F
Sbjct: 2557 -----GLVINNNGEAVYELLVT--AEDQGNDPLTSDIVVTVYVQDINDNPPVF 2602
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + +DRD P +TV D + +D ++IT+ D+NDN P+F++V+Y
Sbjct: 1147 IVIGDIDRDPPYNYTFFNLTVTVSDGDSNTNNDTTNVQITISDVNDNSPVFEKVEY 1202
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
I + +DRD P +T+ D L+D+ +KIT++D+NDN P+FD+
Sbjct: 1771 IVIGDIDRDPPNNNVFYNLTISVSDMDGNTLNDSAIVKITIDDVNDNAPLFDQ 1823
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 30/131 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A+DVD GT+ Y + + F +D +GIVKT+ LDR+ +++Y
Sbjct: 983 IQIQASDVDTV---GTLVYSVEGSD----SFKVDNTSGIVKTVDLLDRE----MQDMY-- 1029
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDN--GTP---------QLSDACTMKIT--VEDIN 107
VQ L +D + +T+ EDN +P +S+ T + V DIN
Sbjct: 1030 ---EVQ-LSVNDGIHSTSVNVTIYVEDNNDNSPVFEFNSYNFNISEGFTGLVVGMVNDIN 1085
Query: 108 DNEPMFDRVQY 118
+N P+F+ Y
Sbjct: 1086 NNGPLFENATY 1096
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q+ ATD+D S Y I E KFSI G + + +D D P +T
Sbjct: 29 FQITATDLDFVSRPSDFVYWI-SGGDEEGKFSIHPTQGDIIVIGDIDSDSPNNNTFYNLT 87
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V DRD +D T+ ITV DINDN+P F Y
Sbjct: 88 ----VSVTDRDSTTN------------------NDTATVLITVIDINDNDPQFSEGSY 123
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
VHATD D N + Y I + F ID TG + + A+D E E+ ++I
Sbjct: 1627 VHATDADLSPNDDVMYY--ISSGNHGNHFDIDNSTGGLSVISAIDV---ETEQSLFI--- 1678
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + + E Y+ G +++ + + ++DIN+N P+F Y
Sbjct: 1679 IEITVYN-------TEPYV-------GNQVMNNTVNVTVNIQDINNNGPLFKNTTY 1720
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD+D N I+Y I + +F+I ETG + T LDR+ E +Y
Sbjct: 3532 VMATDIDSGDNA-YIEYSI-TGGNDGNEFTIIPETGELFTNVELDRE----ENGMYT--- 3582
Query: 63 IRVQALDRDDPEREKEIYITVIAEDN-GTPQLSDACTMKITVEDINDNEPMF 113
+TV A ++ P DA TM I+V+D+NDN P F
Sbjct: 3583 ------------------LTVTATNSKAAPHFMDAITMTISVDDVNDNAPEF 3616
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D N + Y I + F ID TG + + A+D + + + I IT
Sbjct: 453 IQIQATDADLSPNDDVMYY--ISSGNHGNHFDIDNSTGGLSVISAIDVETEQSQFIIEIT 510
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E Y+ QL++ + + ++DIN+N P+F+ Y
Sbjct: 511 V-------------YNTEPYVG--------NQLNNTVNVTVNIQDINNNGPLFENTTY 547
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 27/114 (23%)
Query: 3 VHATDVDPPSNGGT---IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
V+A D D NG IQY + A F ID TG + T+ D D
Sbjct: 3422 VYAIDADSDINGEVFYDIQYVGSLSGNAMAAFDIDPLTGNITTISEFDFD---------- 3471
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ K I V AED G P + IT+ D+ND PMF
Sbjct: 3472 --------------KGSKYYQIMVYAEDKGYPSRKGYGVVGITITDVNDEPPMF 3511
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V ATD D +NG ++Y II G F I++ TG + +LD ++ + E
Sbjct: 139 MVTATDKDEGTNGDVVRYTIIDGDG---TFQINETTGKISVNQSLDYENGDEE------- 188
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+I +I+ ++ P+ + T+ I+V++IND P+F +Y
Sbjct: 189 ------------------FIYLISAEDALPR-TGTTTVTISVQNINDAPPVFVTPEY 226
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I + +DRD P +TV D + +D ++ I + D+NDN P+F + Y
Sbjct: 598 IVIGDIDRDPPNNNVFFNLTVTVSDGDSNTDNDTTSVIIAISDVNDNSPVFSQETY 653
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V A D D PP N Q R G F I+ TG + L LDR
Sbjct: 2395 LTVKAYDADTPPLNS---QVRYFLKEGNSDLFRINASTGEISLLKPLDR----------- 2440
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + E +T++A D G P L+ + +++ V+DINDN P+F+ Y
Sbjct: 2441 --------------ESQSEYILTLVAMDTGLPPLTGSGIVRVEVQDINDNGPVFELNSY 2485
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%), Gaps = 26/117 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + ATD D P NGG Y + P ++ SIDK TG+VK+ + DR
Sbjct: 3652 MTLAATDPDLPHNGGPFTYYLKGGP-HKSWLSIDKVTGLVKSTTSFDR------------ 3698
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E + + + ED+G P L T+ I V D NDN VQ
Sbjct: 3699 -------------EATPTLEVIIEVEDSGKPPLRATHTLIINVLDQNDNPSSSRNVQ 3742
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D NG + Y ++ FS++ +TG++ TL A
Sbjct: 1924 QVVATDNDLGQNG-LVSYTVVSDWANDV-FSLNPQTGML-TLTA---------------- 1964
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS+ T+ V D+NDN P+FD + Y
Sbjct: 1965 --------RLDYEEVQHYILLVQAQDNGQPSLSNTITVYCNVLDLNDNAPIFDPMSY 2013
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG I I ER FS++++TG + +ALD D
Sbjct: 3230 ITVVATDPDLGPNG--ILRFGISGGNERQDFSVNEQTGAIIIQHALDYD----------- 3276
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + D G L+D + I + D+NDN P+F++ +Y
Sbjct: 3277 --------------LIQEYHLNITVRDLGFKSLTDTAILTIILTDVNDNPPVFNQTEY 3320
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2287 LQVSATDVDEGANG-RIRYSILTG-DQNHDFSIGEDTGVVRVAKNLNY------------ 2332
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
ER+ +TV AED SD + I++ DINDN P F
Sbjct: 2333 -------------ERKARYTLTVRAEDCAIENSASDVAELTISILDINDNRPTF 2373
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 74 EREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ IY +T++A DNG P L C ++IT+ + N++ P F++ +Y
Sbjct: 3062 SHEENIYALTILATDNGKPPLYSECMVQITIVNSNNSPPKFEQAEY 3107
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 34/108 (31%)
Query: 15 GTIQYRIIKA------PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
G + Y I K G F I+ ETG++ TL +DR
Sbjct: 1507 GKVTYAISKQEPTEERTGGGRHFGINTETGVIYTLREIDR-------------------- 1546
Query: 69 DRDDPEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMF 113
E +TV+A D P QLS A + + VEDINDN P+F
Sbjct: 1547 -----ESIDTFRLTVVATDRALPPQHQLSTAKLVTVIVEDINDNAPIF 1589
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID G +KTL + DR+ + D R D + + + I DNG
Sbjct: 1187 FTIDTRNGFIKTLRSFDREALVSKMN---DEDRRTGGGDGN----VNYLILDAIVRDNGQ 1239
Query: 91 PQ-LSDACTMKITVEDINDNEPMFDRVQY 118
PQ D +K+ + D+NDN P F R Y
Sbjct: 1240 PQRFQDKVKVKVIITDVNDNAPEFLRGPY 1268
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D G P S + I V D+ND+EP+F++ +Y
Sbjct: 456 VRVNGVLDREEISKYN---LTVVALDGGIPARSATAHLIIDVNDVNDHEPVFEKSEY 509
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD----------- 49
Q HATD D P N IQY + + +R FS++ TGI+ + D +
Sbjct: 3335 FQAHATDKDSPKNA-IIQYAFLPSGTDRHFFSVNSTTGIISSAAIFDYEERRTYTLQLKA 3393
Query: 50 -DPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+P+ E Y T I + ++ P + ++
Sbjct: 3394 KNPDSTMESYATLYIHILGVNEFYPHFLQPVF 3425
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 190 ATDADTGENGVTDQYEIVDG-------NVDHKFRLVTT------TNPSGD-----TSYLH 231
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 232 LETTGNLDRESRGYYNLNISARDGGSPPRMGYLQVNVTILDVNDNPPIFDHSDY 285
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 33/114 (28%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG-ERA---KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
ATD D +NG ++ Y++ AP ER +F+ID TG + T + LDR
Sbjct: 634 ATDHDQGTNG-SVSYQL--APNMERLYPQQFAIDSITGQLTTRHTLDR------------ 678
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E I VIA D G P S T+ ++V DINDN P F
Sbjct: 679 -------------ETMANYEILVIARDQGAPIPQSATATVYLSVADINDNSPEF 719
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 34 DKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ 92
D++TG + Y L + E + +T + +Q R +P + + ++A D G+P
Sbjct: 959 DRDTGNNNRITYNLTHNPNELFRISSVTGVLYLQRPIRSEPN--SILSVELMATDGGSPP 1016
Query: 93 LSDACTMKITVEDINDNEPMFDRVQY 118
L ++ I + D+ND+ P+FD Y
Sbjct: 1017 LFGKLSLSIAIVDVNDHTPVFDHTSY 1042
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V ALDR E + + A+D G P S + I + D NDN P+FD QY
Sbjct: 2222 VNALDR---ELCSSYVLNITAQDRGEPPQSTTTRLLIRILDENDNSPVFDPKQY 2272
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D NG + Y + + +F++D ETG++ T L+ P + T
Sbjct: 300 LTVMASDSDMGDNG-KLTYYLAET---EHQFTVDPETGVISTTEHLNC--PRTSQ----T 349
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +++Q K TV A D+G+P+ + + + D ND++P+ + QY
Sbjct: 350 SGLKIQ----------KSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPII-QFQY 396
>gi|229442301|gb|AAI72919.1| cadherin EGF LAG seven-pass G-type receptor 1 [synthetic construct]
Length = 1713
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 799 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 859 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 892
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 293 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 342
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 343 ---------------VKDTNDHSPVFEQSEY 358
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 912 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 964 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1001
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 373 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 417
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G LS T+ I VED NDN P F Y
Sbjct: 418 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
Length = 3396
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 25/89 (28%)
Query: 26 GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85
G FS+ +TG + T ALDR E +TV A
Sbjct: 918 GSNEPFSVHVQTGAIVTTAALDR-------------------------ETTSTFLLTVTA 952
Query: 86 EDNGTPQLSDACTMKITVEDINDNEPMFD 114
+D+G P L+D ++I++ DINDN P FD
Sbjct: 953 KDSGNPSLADTTDVEISITDINDNSPQFD 981
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D N I YRI + E + +ID TG + T LDR+ EK Y+
Sbjct: 682 VRVQAYDSDEGVNS-EISYRI-QDRDENSPLAIDSRTGWIHTTSPLDRE----EKSRYV- 734
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D G P S + ++ +T++DINDN+P+F+ Y
Sbjct: 735 --------------------FQVVAIDGGIPPKSASTSVVVTIQDINDNDPIFNPKYY 772
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG +++ + E F ID +G+++T LDR+ +Y
Sbjct: 1000 LQISATDDDMGLNG-RVKFMLSSKDVEDGSFVIDPSSGVIRTNKGLDRE----SIAVY-- 1052
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ IA D GTP LS + ++I + DIND+ P F
Sbjct: 1053 -------------------HLIAIAADRGTPTLSSSVEVQIRLNDINDSPPTF 1086
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D N ++Y II +++FS+D +G V + LD
Sbjct: 578 QIRATDADK-GNNAAVRYAIIGG-NTQSQFSMDSISGDVLLVKPLDY------------- 622
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S+ + + V+D NDN P F Q+
Sbjct: 623 ------------ESIRSYRLVIRAQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQF 667
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 31/126 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--------FSIDKETGIVKTLYALDRDDPE 52
+ + ATD D NG I+Y I G+ F I+ TG + T ALDR+
Sbjct: 458 ITIRATDQDIGKNG-EIEYSIASVSGDNVTVGENADNLFRIEARTGTITTRGALDREI-- 514
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E+Y+ I+V A D P+ E++ S T+ + V D NDN P
Sbjct: 515 --SEMYV---IQVMATDMAIPQSERK---------------STTATVFVNVLDDNDNYPQ 554
Query: 113 FDRVQY 118
F Y
Sbjct: 555 FSERTY 560
>gi|21426849|ref|NP_034091.1| protocadherin alpha-12 precursor [Mus musculus]
gi|13876252|gb|AAK26046.1| protocadherin alpha 10 [Mus musculus]
gi|189442773|gb|AAI67180.1| Protocadherin alpha 10 [synthetic construct]
Length = 946
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E+++ V A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 202 DRERASELHLVVKATDGGKPELTGTLELHITVLDANDNAPAFDRAIY 248
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 413 ALDR---ETTADYKVVVTARDGGSPALWATASVSVEVADVNDNAPAFAQSEY 461
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 1 MQVHATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++++A+D+D SNG + + +P A F ID +G +K +D ++ K
Sbjct: 263 IRLNASDLDEGSNGQILYSFAADVSPKTEATFHIDSVSGEIKVNGKIDFEETNLWK---- 318
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I+ +A+D+ G+P + CT+ I V DINDN P
Sbjct: 319 ---IQAEAVDK------------------GSPPMFGHCTILIEVLDINDNAP 349
>gi|402872780|ref|XP_003919505.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-9 [Papio
anubis]
Length = 841
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E+++ + A D G P+L+ + ITV D+NDN P+FDR Y
Sbjct: 201 DREKTPELHLLLTATDGGKPELTGTVQLLITVLDVNDNAPVFDRTLY 247
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 412 ALDR---ESMSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQSEY 460
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 4 HATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+A+D+D NG I + +P ++KF +D +G + + +D ++ K
Sbjct: 265 NASDLDEGLNGDIIYSFSSDVSPDIKSKFHVDPLSGAITVIGHMDFEESRAHK------- 317
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I V A D G P L+ CT+ + V D+NDN P
Sbjct: 318 ------------------IPVEAVDKGFPPLAGHCTVLVEVVDVNDNAP 348
>gi|334349291|ref|XP_001365044.2| PREDICTED: cadherin-23, partial [Monodelphis domestica]
Length = 3103
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 29/113 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V A D+D NG + YR+ + P R F I+ +G+V T LDR
Sbjct: 658 HVVAIDLDEGLNG-LVTYRMQVGMP--RMDFVINSSSGVVTTTTELDR------------ 702
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER E Y+ V+A D GTP S T+ I V D+ND P F
Sbjct: 703 -------------ERIAEYYLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTF 742
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ ++ V ED GTP LS + +T+ D NDN P+F + QY
Sbjct: 1340 DRERQSFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPQY 1386
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +GG + YRI+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 978 VRATDRDT-GDGGLVIYRILS--GSEGKFEIDESTGLIITIDYLDYE----TKTSYL--- 1027
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +YIT++ E + Q S+A +E++
Sbjct: 1028 MNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAIMENL 1073
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + Y I + PG A F +DK++G+V T L
Sbjct: 2276 ITMMATDQDEGENG-ELAYSI-EGPGVEA-FQVDKDSGLVTTRRPL-------------- 2318
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
Q+ +R + +TV+A D G P L + + V D+NDN P+F R
Sbjct: 2319 -----QSYERFN--------LTVVATDGGQPPLWGTTMLYVEVIDVNDNRPVFVR 2360
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 23/115 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D NG TI Y II A F ID TG++ TL LD + + +T
Sbjct: 1402 ITIQALDLDEGPNG-TIAYAII-AGNIINTFQIDSVTGVISTLKELDYEISHGRYTLIVT 1459
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ L R +L+ T+ + V DINDN P+F R
Sbjct: 1460 ATDQCPILSR---------------------RLTSTTTVLVNVNDINDNVPIFPR 1493
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG ++Y +K G R F+ID +G+++T LDR
Sbjct: 2381 EVYATDQDEGLNGA-VRYSFLKTTGNRDWEYFTIDPISGLIQTAKRLDR----------- 2428
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDR 115
E++ + ++A D G P + + + ++DI+DNEP+F R
Sbjct: 2429 --------------EQQPMYSLILVASDLGQPVPYETMQPLLVALDDIDDNEPIFVR 2471
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + YRI G + +F I TG+++
Sbjct: 1836 LQVTATDEDSGLNGQLV-YRI--QAGAQDRFMIHPLTGVIR------------------- 1873
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +DR++ E + + V+A D GT LS + I ++DIND+ P F
Sbjct: 1874 --VGNITIDREEQESYR---LVVVAADRGTVPLSGTAIITILIDDINDSRPEF 1921
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 31/116 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRI--IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A +D N I YR +P RA F ID TG++ +DR+
Sbjct: 1080 VRVQAFSID---NINPIVYRFDPYTSPQARALFKIDSVTGVITVKGLVDRE--------- 1127
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ + Y + D+G P++ + ITV D NDN P FD
Sbjct: 1128 -----------------KGDFYTLTVVADDGGPKIDSTVKVYITVLDENDNSPQFD 1166
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV A DNG+P + + + + DINDN P+FD++ Y
Sbjct: 2108 DYEEVHWVNFTVQAADNGSPPRAAEIPVYLEIVDINDNNPIFDQLSY 2154
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IY++V+A+D G P L+ + I V D NDN P F + Y
Sbjct: 384 IYLSVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPSY 423
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D + I+Y ++ G KF I+ TG + L +LDR+ K YI
Sbjct: 2169 LTVTATDADSGA-FALIEYSLVDGEG---KFGINPTTGDIYVLSSLDRE----TKAHYIL 2220
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T AL +D+P D + + ++ + I V D+ND P F + QY
Sbjct: 2221 T-----ALAKDNPG------------DIPSNRRENSVQVVIQVLDVNDCRPQFSKPQY 2261
>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
Length = 4472
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D SN I Y++ + E F+ID +TG VKTL LDR E+
Sbjct: 3034 LQVSATDADIQSNA-EITYQLSGSGAE--SFTIDSKTGAVKTLATLDR-------EVTDV 3083
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++ V+A+D+D+ + ++ ITVED NDN P F
Sbjct: 3084 YNLTVRAVDKDNHFCQ--------------------ASLLITVEDANDNAPKF 3116
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D NG ++Y + E KF+I +ETGIV + LDR+ +++
Sbjct: 841 IQLEAKDKDLGVNG-MVRYSFLT---ETDKFNIHEETGIVSVMRLLDRE----ANPVFV- 891
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RV A D E P+L ++I +ED+NDN PMF
Sbjct: 892 --LRVAAFDAAIDE----------------PKLVSTVLLRINLEDVNDNPPMF 926
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D P N I+Y I + + F +D +G ++ LDR
Sbjct: 3346 LTVLANDLDGPLNN-QIRYSI-EESNQSCPFIMDAVSGELQLARQLDR------------ 3391
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D+G+P SD+ + I V D+NDN P+F + Y
Sbjct: 3392 -------------EMVASYMLTVMASDSGSPLKSDSAAINIAVSDVNDNPPVFSQANY 3436
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 32 SIDKETGIVKTLYALDRDDPEREKEIYITTDIRV---QALDRDDPEREKEIYITVIAEDN 88
+ID++ G L +D R+K I D ++ ++ DR++PE EK I I+++A+D
Sbjct: 2509 AIDEDPGKYGQLTFFIMNDIARDK-FNINEDGQIYTEESFDRENPE-EKIIRISLMAKDG 2566
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDRVQY 118
G L C + + + D+NDN P F +Y
Sbjct: 2567 G--GLLGFCNVIVILSDVNDNSPKFKHSEY 2594
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + Y+TV A G LSD T+ I ++DINDN P+F + Y
Sbjct: 3285 DYEESSQHYLTVKATVGGKQSLSDMATVSIHLQDINDNSPVFSQKIY 3331
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 26/98 (26%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE 74
G ++Y I G F+I++E+GI+ T LDR E
Sbjct: 1066 GEVRYSIRGGSG-LGVFTINEESGIITTQEILDR-------------------------E 1099
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
++TV A D G LS + I V+D+NDN P+
Sbjct: 1100 TNNHYWLTVYATDQGIVPLSSFVEVYIEVQDVNDNAPL 1137
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D SN + Y++ + G + F ID ETG++ T LD + +
Sbjct: 2296 LQVVAMDPDAQSNA-ILFYKLHERDGSTSDHFRIDAETGVIWTAGLLDHETQSQH----- 2349
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ V+A+D G QLS + + + D+NDN P+F + Y
Sbjct: 2350 --DLIVKAVD------------------GGAIQLSSEVQVTVYITDLNDNPPIFAQQLY 2388
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ A D D NG I+Y + G FSI++ +GI+ +L+R ++ K +++
Sbjct: 3137 RLEAFDADIGMNG-KIRYSFEDSAG--GLFSIEESSGII----SLERSLDKQMKAMHV-- 3187
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV+A D+ P R LS ++ +TV D ND+ P+F+R +Y
Sbjct: 3188 -LRVRATDQGFPHR-----------------LSSLGSVVVTVLDANDHPPVFERREY 3226
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D SN + Y+I++ P FSID TG ++TL LD + ++ I+
Sbjct: 1786 LVVRATDADQHSNARLV-YQIME-PFACNYFSIDSRTGAIQTLSNLDYE----QRRIF-- 1837
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
+ RVQ D G P+L D + I + +IND P F + Y
Sbjct: 1838 -NFRVQ------------------VHDTGNPRLFAQDTANVTIHIININDCAPKFTQDSY 1878
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++++ATD D + Y ++ + KF +D TG + T LD + R
Sbjct: 1470 LEINATDKD---ENNKLSYTLLSSTDLFSLKKFRLDPGTGFLYTTEKLDHETMHRH---- 1522
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+ D G P S+ + I VED NDN P F QY
Sbjct: 1523 ---------------------ILTVMVRDQGVPVKSNVVRVIINVEDSNDNPPWFTSSQY 1561
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D+D S+ + Y+I + + F+ID +TG+V T
Sbjct: 1158 IQIQAFDLDSESSE-NLSYKI-SSGNPQGFFAIDFQTGLVTT------------------ 1197
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ LDR E++ E + + D+G+P S + + V D NDN P F
Sbjct: 1198 ---TSRKLDR---EKQAEHLLEITVSDDGSPSKSTVVHVIVNVLDENDNSPQF 1244
>gi|119514214|gb|ABL75877.1| protocadherin 2G2 [Takifugu rubripes]
Length = 941
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 1 MQVHATDVD---PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
+ +H DV+ P +I+ I ++ + +FSI++ A+ R ++
Sbjct: 119 VSLHVQDVNDNSPKFRENSIEMEISESAEKGTRFSIEEANDADIGQNAVQRYILQKNDNF 178
Query: 58 YITTDIRVQAL---DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
++ D + L +R D E++KEI + + A D G+PQ S + +TV D NDN P+F
Sbjct: 179 ILSVDNKKVELVLENRLDREKQKEINLLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFS 238
Query: 115 RVQY 118
+ Y
Sbjct: 239 QAVY 242
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IT+ A D G+P LS + T+ ++V DINDN P+F+ Y
Sbjct: 415 ITIRATDEGSPPLSSSKTLHLSVADINDNPPVFEEESY 452
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ A+ D E+ + + V+A DNG+P LS T+ + + D+NDN P
Sbjct: 509 IHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSP 555
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER +E Y+TV A D G P LS+ + ITV D NDN P+F + Y
Sbjct: 4499 DYERAREFYLTVQALDGGVPPLSNHAAVNITVLDSNDNPPIFTQASY 4545
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T I V++LDR E + ++ V+A D G P LS + I VED+NDN P F++ Y
Sbjct: 3519 TLILVRSLDR---ETQSLHHLLVMASDQGNPSLSSTAHIWIRVEDVNDNPPQFEQRSY 3573
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 72 DPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER Y +T+ A D GTP + T+ +TV D ND+ P+FDR Y
Sbjct: 1185 DRERAPMGYNLTLRAVDGGTPPRNSTATLHVTVSDWNDHAPVFDREHY 1232
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 26/96 (27%)
Query: 24 APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITV 83
AP F +D TG + TL LDR+ +R Y+ + +
Sbjct: 4043 APELANIFRLDSVTGWITTLGLLDREQCDR----YV---------------------LPI 4077
Query: 84 IAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
IA DNGTP +L+ + I V D NDN P F + Y
Sbjct: 4078 IASDNGTPAKLTSTTAVVIEVRDYNDNPPQFSQSHY 4113
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA---KFSIDKETGIVKTLYALDRDDPEREKEIY 58
++HATD D N I+Y ++ + A F+ID E+GIV LDR
Sbjct: 4347 KIHATDSDLALNR-KIRYSMVTSTTSLAGQNSFAIDAESGIVTVAKGLDR---------- 4395
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D GTP L + I V D NDN P F R Y
Sbjct: 4396 ---------------ETVPSYNLTVSAIDLGTPSLLSTVVVTIVVTDCNDNPPQFSRKLY 4440
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++++A D+D NG I Y ++ G+R A+F ID TG++ LDR+ I
Sbjct: 4560 LRLNAVDLDGGDNG-RITYTLLN--GDRHAQFRIDSSTGLLTVSGQLDRE--------LI 4608
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + + V A DNG P L+ + + V D NDN P F +V Y
Sbjct: 4609 TSYM-----------------LEVEARDNGLPSSLASNVLVAVEVTDANDNPPAFSQVNY 4651
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + +I + + F ID E+G+++ LDR
Sbjct: 1617 IRLRARDRDHGYNG--LLVYVISGGDDDSAFQIDTESGLLRVAGQLDR------------ 1662
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E+ + V D G PQ S + + V D+NDN P FDR
Sbjct: 1663 -------------EKRAGYSLNVTVFDLGQPQKSAWRILPVIVTDVNDNPPRFDR 1704
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 30/110 (27%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D GG ++Y + + +FSIDK TG V+ LD +D
Sbjct: 1830 VEATDPDL-GLGGVVRYSLASSYASEIVEQFSIDKVTGTVRLARRLDFED---------- 1878
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDN 109
+ +Y +TV A+D G+P LS + + V D+N+N
Sbjct: 1879 ----------------RSVYNLTVRAKDRGSPSLSSEAYLAVEVVDVNEN 1912
>gi|328722859|ref|XP_001948150.2| PREDICTED: cadherin-23-like isoform 1 [Acyrthosiphon pisum]
Length = 1878
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 1 MQVHATDVDPPSNGGT-IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI-Y 58
+ V A D+D + I YRI+ + FSID TG++K + +D + + K
Sbjct: 610 VTVEARDLDLNGTKNSEISYRILHSDYPVECFSIDSVTGVLKPIRPVDFEKLQNRKSTNS 669
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++R I + + A+D+G P LSD + + VED+ND P F+ + Y
Sbjct: 670 INGNLR-------------PINLVIQAQDHGLPSLSDETHVVVYVEDVNDFGPTFESISY 716
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 23/119 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V+A D D + + YR+ + G KF ID +G++K + D + + + Y
Sbjct: 731 LEVNAWDEDGSAPNNIVVYRL--SSGAEDKFVIDAYSGVIKVAHGASLDPDKTQPKTY-- 786
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT--PQLSDACTMKITVEDINDNEPMFDRVQ 117
Y+ V+A D G QLS + I ++D+N+ P F ++
Sbjct: 787 -----------------AYYLEVVAIDGGIGDQQLSSFVNVTIKIQDVNNKPPFFKEME 828
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 31/117 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D P+ T+ RI+ FSI E G + L+ L D +Y T
Sbjct: 1183 LLIKATDADDPT---TVNGRIM--------FSI--EDGNERELFGLHNVD-YWSGRLYTT 1228
Query: 61 TDIRVQALDRDDPEREKEIY----ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + K +Y + + A+D G PQ S T+ + V D+NDN P F
Sbjct: 1229 SSL-------------KNLYGNYSLLIRAQDGGDPQKSSLATVNVCVTDVNDNAPRF 1272
>gi|395817821|ref|XP_003782346.1| PREDICTED: protocadherin alpha-7 [Otolemur garnettii]
Length = 809
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P +++++ I + LDR E E+++ ++A D G P+L+ + ITV D ND
Sbjct: 181 DVPTKDEQVKPLGLILRKPLDR---EEASELHLLLMATDGGKPELTGTVWLLITVLDAND 237
Query: 109 NEPMFDRVQY 118
N P+FDR Y
Sbjct: 238 NTPVFDRTLY 247
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR ER + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 412 ALDR---ERVSAYELVVTARDEGSPSLWATASVSVEVADVNDNAPAFPQPEY 460
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 4 HATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+A+D+D NG I + +P ++KF ID TG EI +T
Sbjct: 265 NASDLDEGLNGDIIYSFSSDVSPDVKSKFRIDPVTG-----------------EITVTGL 307
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I D E K I V A D G P L+ CT+ + + D NDN P
Sbjct: 308 I--------DFEESKAYKIRVEAIDKGFPPLAGHCTVLVEIVDANDNAP 348
>gi|194389438|dbj|BAG61685.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D N I Y + P +FS+D TG++ + LDR
Sbjct: 516 KVSAMDADSGPNA-KINYLL--GPDAPPEFSLDCRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|195591703|ref|XP_002085578.1| GD14850 [Drosophila simulans]
gi|194197587|gb|EDX11163.1| GD14850 [Drosophila simulans]
Length = 1459
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 28/112 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D+DP TI Y I+ F ID +TG++KT ER+
Sbjct: 899 DIDPTQ---TITYNIVSG-NLVGYFEIDSKTGVIKT--------TERK------------ 934
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + E + V DNG+P LS + ++V DINDN P FD+ Y
Sbjct: 935 -LDR---ENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVY 982
>gi|397504069|ref|XP_003822631.1| PREDICTED: protocadherin-23-like [Pan paniscus]
Length = 2770
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 1661 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY-------ELTSS 1711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 1712 YSLIVQATDK------------------GMPRLSNTTVIKVQVTDINDNAPAF 1746
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T LD
Sbjct: 1039 HITAHDPDEGRNGKVTYSILSG-NENMTFMLDESSGLLTTTCPLDY-------------- 1083
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ +TV D+ND P+F + Y
Sbjct: 1084 -----------EMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLY 1128
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2017 VLLHSLDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2069
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
V ATD D N + Y + G++ ++F I+ +TG + T LDR
Sbjct: 826 VSATDSDVGKNA-QVTYSLDTDNGDQTASEFIINPQTGAITTTKPLDR------------ 872
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G P LSD ++I+V D+NDN P+F+ QY
Sbjct: 873 -------------EIVPAYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQY 917
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG ++Y ++ G+ A F++D TGI++T LDR+ + YI
Sbjct: 932 LRVSATDADTDLNG-RVRY-ALEDDGDGA-FAVDSTTGIIRTAKPLDRESVAK----YI- 983
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ +A D G+P LS + I +ED+ND+ P F+
Sbjct: 984 --------------------LKAVAMDRGSPSLSTVVPVTIKIEDVNDSPPAFE 1017
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 31/123 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREK 55
+++ A D D +N I+Y I A E +++ ETG + T LDR+ R +
Sbjct: 610 LRIQAYDADEGANA-QIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQCSRYQ 668
Query: 56 EIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
TVIA D+G S + T+ +TV D+NDN+P FD
Sbjct: 669 -------------------------FTVIAADSGEISKSASATVILTVTDVNDNDPYFDP 703
Query: 116 VQY 118
Y
Sbjct: 704 KNY 706
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 27/112 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
++ ATD D N ++Y II + FSID G V + LD
Sbjct: 506 RIRATDADS-GNNAAVRYAIIGGNTQNT-FSIDSMVGDVALVKPLDY------------- 550
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + I + A+D G+P S+ + + V D+NDN P F
Sbjct: 551 ------------ESTRSYKIVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRF 590
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 26/105 (24%)
Query: 15 GTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73
G I YR+ P FSID +G + LD + +R I
Sbjct: 591 GVITYRLSNNGPATGNLFSIDSRSGHLSLARPLDYETVQRHTLI---------------- 634
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+G P LS T+ + V+D+NDN P+F+R +Y
Sbjct: 635 ---------VTASDSGIPSLSTNLTILVEVQDVNDNAPVFERSEY 670
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 23/124 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPE------RE 54
MQV A D D N + YRI+ G+ + K + A + + PE
Sbjct: 685 MQVTAVDADT-GNNARLTYRIL---GDDQRTRTGKSSS-----KASEANTPEIFGIFPNS 735
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
IY+ T LDR+D ER ITVI DNG P L+ + ++V D NDN P+F
Sbjct: 736 GWIYLRTK-----LDREDQERYN---ITVIVSDNGVPTLTATTHVIVSVLDANDNNPIFA 787
Query: 115 RVQY 118
+ Y
Sbjct: 788 KQLY 791
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 22 IKAPGERAKFSIDKETGIVKTLYALD--RDDPEREKEIY---------------ITTDIR 64
+K K ++ + T I +T+ L+ R D R+K IY +T +++
Sbjct: 1774 LKFQNNSYKVNLVENTPIGQTVLHLNAVRSDGRRQKIIYSFGSGNEDGTFSIDAVTGEVK 1833
Query: 65 VQALDRDDPER-----EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D ER + I + +A +G+P L C++K+ ++D NDN P F + QY
Sbjct: 1834 IRNSHNLDYERFSRLNTEGIDLVAVARTDGSPLLYGYCSIKVVLQDENDNAPRFTQQQY 1892
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 5 ATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D +N I+Y I K A ++ FSID TG + L LD E KE +
Sbjct: 1139 ATDNDSGTNA-EIKYNISKPATAQKEFFSIDSLTGSLTLLAPLDY---EETKEFLLI--- 1191
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
VQA D+ N T +++ + T +I V D+NDN P F
Sbjct: 1192 -VQATDQ---------------SSNVTERMTTSATARIMVTDVNDNSPKF 1225
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K F+ID TG+++T +LD +
Sbjct: 910 VRVRAIDRDYGVNA-SITYSILKGRDSDGHGMFTIDPITGLIRTKASLDHE--------- 959
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
EK IY + V A DNG P ++I V D+NDN P F
Sbjct: 960 -----------------EKTIYRLAVAATDNGKPPRQTVRLLRIEVLDLNDNRPTF 998
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 70 RDDPERE-KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
RD +RE K IY + V A D GTP S ++KI + D+NDN P
Sbjct: 844 RDRLDRETKSIYDLVVEARDQGTPYRSSRVSIKIKILDVNDNSP 887
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D D NG I Y I KFSID TG + T LDR EI+
Sbjct: 1481 VVASDADEGLNG-EITYSI-SGGNIGNKFSIDMNTGAL-TARPLDR-------EIHARYV 1530
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++ A DR P + C + + VED NDN+P F+ +Y
Sbjct: 1531 LQITAQDRGSPTSHQ-----------------GHCNITVRVEDENDNDPKFELQKY 1569
>gi|327270385|ref|XP_003219970.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
Length = 822
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E +T+IA D GTP LS + + + DINDN P F++ Y
Sbjct: 415 DRERTPEYNVTIIATDKGTPTLSTEKIISLKISDINDNSPTFEKSSY 461
Score = 37.7 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +EI + V A+D G+P LS T+K+ + D ND P
Sbjct: 525 DYEQSREIQVKVRAQDGGSPPLSSTATVKVFILDQNDKSP 564
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D SNG + Y P R KFS+D + G + ALD ++ ER Y+
Sbjct: 266 VQVKATDKDAGSNG-QVTYNFRNIPERARQKFSLDSKDGKITIKEALDFEESER----YL 320
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQL 93
+ V+A D ++ I V+ E++ P++
Sbjct: 321 ---VAVEARDGGGLATHSKVEIKVLDENDNAPEV 351
>gi|221045914|dbj|BAH14634.1| unnamed protein product [Homo sapiens]
Length = 897
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D N I Y + P +FS+D TG++ + LDR
Sbjct: 516 KVSAMDADSGPNA-KINYLL--GPDAPPEFSLDCRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|395504708|ref|XP_003756689.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 784
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR E++ E+ +T+ A D G+P S ++ITV DINDN P+F + QY
Sbjct: 198 KALDR---EKQPELTLTITAMDGGSPVKSGTAQVQITVVDINDNTPVFAKPQY 247
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ IYI I + LDR E + + IT+ +D G+P+L + + + DINDN P+F+
Sbjct: 398 ENIYIL--ITEETLDR---ENKAQYNITITVKDFGSPRLKTEHNITVIISDINDNPPVFN 452
Query: 115 RVQY 118
+ Y
Sbjct: 453 QTSY 456
>gi|312089901|ref|XP_003146416.1| cadherin domain-containing protein [Loa loa]
Length = 653
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D P NG + R F I+ ETG
Sbjct: 489 LKVMATDEDSPPNGEIVYSLYYSQSESRKPFIINSETG---------------------- 526
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R R D E+ + +TV A D G L C + V D+NDN P FDR Y
Sbjct: 527 -ELRPSPFVRFDREQRAQEEVTVKATDKGERPLIGFCQFTVQVLDVNDNPPQFDRTFY 583
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 33 IDKETGIVKTLYALDRDDP--EREKEIYITTDIR------VQALDRDDPEREKEIYITVI 84
IDK K LY L D E E Y T D ++ALD DD + K + VI
Sbjct: 156 IDKRRSKGKLLYQLYLDTTLVEHESSPYFTIDAEHGLVQLIKALDYDDNTQPKHHQLAVI 215
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
A ++ + + ++D+NDN P+F + Y
Sbjct: 216 AREDSK---ESKVPLDVYIKDVNDNAPIFTQPIY 246
>gi|126290456|ref|XP_001368788.1| PREDICTED: protocadherin alpha-8-like [Monodelphis domestica]
Length = 802
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E ++ + A D G P+LS M ITV D+NDN P FDR +Y
Sbjct: 201 DREEVPEYHLILTATDGGKPELSGTMQMLITVLDVNDNAPTFDRSEY 247
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + V A D GTP L ++ + + D+NDN P F++ Y
Sbjct: 414 DRESVPAYELVVTARDGGTPALWATASVSVVIGDVNDNAPAFEQSLY 460
>gi|3253079|dbj|BAA29048.1| Cadherin-related neural recepter 3 [Mus musculus]
Length = 909
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E+++ V A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 165 DRERASELHLVVKATDGGKPELTGTLELHITVLDANDNAPAFDRAIY 211
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 1 MQVHATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++++A+D+D SNG + + +P A F ID +G +K +D ++ K
Sbjct: 226 IRLNASDLDEGSNGQILYSFAADVSPKTEATFHIDSVSGEIKVNGKIDFEETNLWK---- 281
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I+ +A+D+ G+P + CT+ I V DINDN P
Sbjct: 282 ---IQAEAVDK------------------GSPPMFGHCTILIEVLDINDNAP 312
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + + V A D G+P L ++ + V D+NDN P + +Y
Sbjct: 376 ALDR---ETTADYKVVVTARDGGSPALWATASLSVEVADVNDNAPHSQQSEY 424
>gi|326671162|ref|XP_001345450.3| PREDICTED: protocadherin alpha-C2-like [Danio rerio]
Length = 807
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++ALDR E+ + IT+ A D GTP L+D T+ +T++DINDN P F R Y
Sbjct: 406 ILIEALDR---EQINKYDITLHATDKGTPPLTDNETISVTIQDINDNAPTFPRSIY 458
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 25 PGERAKF--SIDKETG--IVKTLYALDRDDPEREKEIYITTD-------IRVQALDRDDP 73
PGER ++D + G ++T Y + D E EI +D + +LDR
Sbjct: 144 PGERFSLTNAVDADVGENSIETYYLSESD--EFTIEIQSGSDGTKYVDLVLKASLDR--- 198
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ +T+ A D GTP S ++ I V D+NDN P FDR Y
Sbjct: 199 EKQALHTLTLTAVDGGTPARSGTASIIIQVLDVNDNAPQFDRQVY 243
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
AL D EREKE + A D+G P LS T+ I + D NDN P+
Sbjct: 517 ALRTFDYEREKEFLFHIEARDSGLPPLSSNVTVHIILIDQNDNTPL 562
>gi|332025272|gb|EGI65444.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 1179
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ A D D NG + + + G+R + F ID +TG + T+ LDR
Sbjct: 825 VQIRARDRDLDYNGKLV---FVISSGDRDSVFGIDPDTGDLNTIGYLDR----------- 870
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
ERE E Y+ + D G PQ S + + IT+ D+NDN P F++
Sbjct: 871 --------------ERENEYYLNISVFDLGKPQKSASKMLPITILDVNDNAPKFEK 912
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ +ATD D N + Y ++ E F +D TG++ LDR+ +EIY
Sbjct: 930 WRANATDADLGDNA-RVTYSLVT---ETNDFRVDPVTGVLSVFGKLDRE----RQEIY-- 979
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++R++A D N TP L +++TV+D+NDN P F Y
Sbjct: 980 -ELRIRARD----------------NSNDTPPLHSDALVRVTVDDVNDNAPTFALSNY 1020
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 28/114 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D + GG ++Y + A F +DK +G V+T +LD + E++++
Sbjct: 1037 VDATDPDEGA-GGDVEYFLSDAMESEGFFKVDKVSGTVRTTQSLDFE----ERQVHT--- 1088
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN--EPMFD 114
+T++A D G P LS + I V D+N+N P+FD
Sbjct: 1089 ------------------LTIVARDRGEPSLSSETMLVIEVIDVNENLYTPVFD 1124
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ TD D N + Y I E +F ++ ETG++ T LD EK+ + T
Sbjct: 455 IRLKVTDADEGKNA--LVYLEIVGGNEGGEFYVNAETGMLYTAVNLDA-----EKKAFYT 507
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ V A+D+ + K+ + +KI V D NDN+P FD+
Sbjct: 508 --LTVSAIDQGNAGTRKQ----------------SSAKVKINVVDTNDNDPTFDQ 544
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D N I Y I ++ F ID +GIVKT LD + +RE +++
Sbjct: 562 VRVTAKDRDSGENA-YISYSIDNL--KKVPFEIDHFSGIVKTKQVLDYETMKREYLLHVR 618
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRV 116
A D G P A +++ + D+NDN P F+R+
Sbjct: 619 ------------------------ASDWGLPYRRQAEMQLRVKLRDVNDNRPQFERI 651
>gi|328722861|ref|XP_003247692.1| PREDICTED: cadherin-23-like isoform 2 [Acyrthosiphon pisum]
Length = 1850
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 1 MQVHATDVDPPSNGGT-IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI-Y 58
+ V A D+D + I YRI+ + FSID TG++K + +D + + K
Sbjct: 610 VTVEARDLDLNGTKNSEISYRILHSDYPVECFSIDSVTGVLKPIRPVDFEKLQNRKSTNS 669
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I ++R I + + A+D+G P LSD + + VED+ND P F+ + Y
Sbjct: 670 INGNLR-------------PINLVIQAQDHGLPSLSDETHVVVYVEDVNDFGPTFESISY 716
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 23/119 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V+A D D + + YR+ + G KF ID +G++K + D + + + Y
Sbjct: 731 LEVNAWDEDGSAPNNIVVYRL--SSGAEDKFVIDAYSGVIKVAHGASLDPDKTQPKTY-- 786
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT--PQLSDACTMKITVEDINDNEPMFDRVQ 117
Y+ V+A D G QLS + I ++D+N+ P F ++
Sbjct: 787 -----------------AYYLEVVAIDGGIGDQQLSSFVNVTIKIQDVNNKPPFFKEME 828
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 31/117 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D P+ T+ RI+ FSI E G + L+ L D +Y T
Sbjct: 1183 LLIKATDADDPT---TVNGRIM--------FSI--EDGNERELFGLHNVD-YWSGRLYTT 1228
Query: 61 TDIRVQALDRDDPEREKEIY----ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + K +Y + + A+D G PQ S T+ + V D+NDN P F
Sbjct: 1229 SSL-------------KNLYGNYSLLIRAQDGGDPQKSSLATVNVCVTDVNDNAPRF 1272
>gi|198465879|ref|XP_001353802.2| GA19599 [Drosophila pseudoobscura pseudoobscura]
gi|198150354|gb|EAL29536.2| GA19599 [Drosophila pseudoobscura pseudoobscura]
Length = 1828
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D D S GTI YRI+ + F+ID +TG++ T +LDR+
Sbjct: 1314 FQVIANDPDDESTPSGTITYRILPDTADAETFAIDTQTGLITTRQSLDRE---------- 1363
Query: 60 TTDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
K +Y ++ DNG P+ S ++I V D++D+EP F R
Sbjct: 1364 ----------------TKNMYKIILEVSDNGQPKQSVTRILQIAVLDVDDHEPRFAR 1404
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQA- 67
DP ++YRI+ G F ID+E+G++ + QA
Sbjct: 741 DPDGLDSLLRYRIV---GANDNFEIDEESGVIT---------------------VSTQAH 776
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
+DRD EI + + D+GTP A T+ + V+DIND P F++ Y
Sbjct: 777 IDRDSNMNSFEIIVNAV--DSGTPIPETATSTVYVNVKDINDERPKFEQASY 826
>gi|195171399|ref|XP_002026493.1| GL15491 [Drosophila persimilis]
gi|194111399|gb|EDW33442.1| GL15491 [Drosophila persimilis]
Length = 1761
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSN-GGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D D S GTI YRI+ + F+ID +TG++ T +LDR+
Sbjct: 1247 FQVIANDPDDESTPSGTITYRILPDTADAETFAIDTQTGLITTRQSLDRE---------- 1296
Query: 60 TTDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
K +Y ++ DNG P+ S ++I V D++D+EP F R
Sbjct: 1297 ----------------TKNMYKIILEVSDNGQPKQSVTRILQIAVLDVDDHEPRFAR 1337
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 28/112 (25%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQA- 67
DP ++YRI+ G F ID+E+G++ + QA
Sbjct: 674 DPDGLDSLLRYRIV---GANDNFEIDEESGVIT---------------------VSTQAH 709
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
+DRD EI + + D+GTP A T+ + V+DIND P F++ Y
Sbjct: 710 IDRDSNMNSFEIIVNAV--DSGTPIPETATSTVYVNVKDINDERPKFEQASY 759
>gi|395504730|ref|XP_003756700.1| PREDICTED: uncharacterized protein LOC100917728 [Sarcophilus
harrisii]
Length = 1664
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR+D EI + + A D G P+L+ +KI+V D+NDN+P FD+ +Y
Sbjct: 198 KSLDRED---TAEIDLLLTATDGGKPELTGTVQLKISVLDVNDNDPEFDQSEY 247
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 32 SIDKETGIVKTL-YALDRDDPEREKEIYI----TTDIRVQA-LDRDDPEREKEIY-ITVI 84
+ D + GI + YA+ R P EK ++I T DIR+ LD +D +Y I V
Sbjct: 1079 ATDPDEGINGEISYAIKRISPASEKSMFIMNSVTGDIRIHGELDFED----NNVYEIQVT 1134
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEP 111
A D G P + CT+ + V DINDN P
Sbjct: 1135 ATDRGAPPMVGYCTILLEVVDINDNAP 1161
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E EI + + A D G P+L+ + ITV D+NDN P FD+ +Y
Sbjct: 1014 DREETPEISLLLTATDGGKPELTGTVELLITVLDVNDNPPKFDKSEY 1060
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D GTP L + + + D+NDN P F++ Y
Sbjct: 422 LVVTARDGGTPALRATARISVGIGDVNDNAPAFEQPLY 459
>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Loxodonta africana]
Length = 2928
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 735 ISATDEDTGENARITYFMEDSIP----QFRIDADTGAVTTQAELDYED------------ 778
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 779 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 821
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ PG F ID +G+++T +DR++ E +
Sbjct: 310 LTVRATDGDAPPNA-NILYRLLEGPGGNPSEVFEIDPRSGVIRTRGPVDREEVESYQ--- 365
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T + Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 366 LTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAPVL 420
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++YR+ G FSI+ TG + LDR+ E + Y
Sbjct: 526 LHVQAIDADAGDNA-RLEYRL-AGVGHDFPFSINNGTGWISVAAELDRE----EVDFY-- 577
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +T+ D+NDN P F + +Y
Sbjct: 578 -------------------SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEY 616
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 420 LRVTASDRDKGSNA-LVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 467
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
T KE + V A+D G P LS+ + + + DINDN P+F
Sbjct: 468 T---------------KEYTLRVRAQDGGRPPLSNVSGLVTVQILDINDNAPIF 506
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y F ++ +GIV+TL LDR
Sbjct: 836 LQISATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDR------------ 882
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + A D G P + +TV D+NDN P+F++ ++
Sbjct: 883 -------------ENVAQYTLRAYAVDKGMPPARTPMEVMVTVLDVNDNPPVFEQDEF 927
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG V T LDR
Sbjct: 207 IDPDEGEAGRLEYTMDALFDSRSNHFFSLDPVTGAVTTAEELDR---------------- 250
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V +D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 251 ---------ETKSTHVFRVTVQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 295
>gi|426229343|ref|XP_004008750.1| PREDICTED: cadherin-related family member 2 isoform 1 [Ovis aries]
Length = 1308
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D P +N + + ++ + FS+D + GI++ L LDR+
Sbjct: 606 IQAHDND-QPDTNNSLLHFSLLPSLYSH-NFSVDPDKGILRNLGPLDREAI--------- 654
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+P I ++V D+G P L ++ ITVEDINDN P+F++ +Y
Sbjct: 655 -----------NPTLGGRIVLSVNVSDSGEPALWTTVSVTITVEDINDNLPIFNQSRY 701
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 33/113 (29%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HA+D D GG + Y ++ PG A F++D ++G
Sbjct: 504 IHASDPDT-GEGGHVTYSLL--PGNGADIFAVDPDSG----------------------- 537
Query: 62 DIRVQALDRDDPEREKEI--YITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
RV DR+ +REK+ Y+T+ A D G LS + T++I V D+NDN P+
Sbjct: 538 --RVTVRDRELLDREKQAVYYLTLQATDGG--NLSSSTTLQIHVLDVNDNSPV 586
>gi|395736311|ref|XP_003780452.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-9 [Pongo
abelii]
Length = 913
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E+++ + A D G P+L+ + ITV DINDN P+FDR Y
Sbjct: 201 DREETPELHLLLTATDGGKPELTGTVQLIITVLDINDNAPVFDRTLY 247
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D N ++Y ++ + F+ID++TG++ T +D
Sbjct: 463 IRVSAEDADEGPNA-RVRYSLLNS----TWFAIDEDTGLISTAAHVD------------- 504
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + +TV+A D+G P LS + T+++TV D+NDNEP+F++ Y
Sbjct: 505 ------------CEADPAPLLTVLATDSGKPPLSASATVRVTVHDVNDNEPIFEKPLY 550
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A+D D NG I+Y I + +R + F ID ETG+V ALD + ER +
Sbjct: 245 LKVDASDADAGENG-RIEYSINRRQSDREEMFRIDPETGMVYVNKALDFESKERHE---- 299
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ ++A D G L + + + V D+NDN+P
Sbjct: 300 ---------------------LVIVARDRGAQPLEASAFLSVHVSDVNDNQP 330
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ E+ + +T+IA D G PQL+ + + V DINDN+P F
Sbjct: 2270 LDREIREKYR---LTIIATDQGNPQLTGTAALSVRVIDINDNQPTF 2312
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 28/114 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG I Y II +KF +D TG++
Sbjct: 1742 ATDADEGKNG-EISYSIISG-NIGSKFKLDAVTGVLSA---------------------- 1777
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+LDR E + +TV A+D G P L C + + V D+NDN P F QY
Sbjct: 1778 -GSLDR---EAVPKYVLTVSAKDKGRPSLEARCNLTVVVLDVNDNAPSFLHNQY 1827
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ +R +TV+A DNG+P + + ++ +TV D NDNEP F++ Y
Sbjct: 1047 LDRETLDRYS---LTVLATDNGSPAATASASILVTVLDDNDNEPRFEKDLY 1094
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L + +TV+D+NDN P+F + +Y
Sbjct: 182 ALDR---EARAGYQLLVEALDGGSPPLRSRLHVNVTVQDVNDNPPIFKQSRY 230
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV ATD D NG I Y I A F +D TG++ T +LDR+
Sbjct: 1869 MQVRATDSDQGVNG-KITYSI--AEESSWLFRVDNLTGVITTAGSLDREQ---------- 1915
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD-ACTMKITVEDINDNEPMFDRVQY 118
Q+L R V+A D+G + + ++I + D+NDN P+F+ +
Sbjct: 1916 -----QSLYR----------FLVVATDSGKYEARQTSVPVEIYIGDVNDNRPIFEEYPF 1959
>gi|340373144|ref|XP_003385102.1| PREDICTED: cadherin-23-like [Amphimedon queenslandica]
Length = 1794
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 27/113 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q+ ATD D SN + Y I G KFSID TG++ LD + P + EI IT
Sbjct: 1101 QLVATDADTGSNA-QVSYAIKSQNGN--KFSIDPVTGLITLTDGLDYETPPNQYEIIITV 1157
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D+G P LS ++++ V DINDN P D
Sbjct: 1158 ------------------------TDHGVPPLSATASVRVNVTDINDNPPTID 1186
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD 50
+ ATD D SN + Y +I P + F+I+ TG++ TL LDR+D
Sbjct: 672 ISATDPDEGSNS-VVSYTLITDPNDNGLFAINSNTGVLSTLSPLDRED 718
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER + +TV D G P S + I+V D+NDN P+F
Sbjct: 391 ERRSDFIVTVRVNDGGNPSYSTHVSFHISVSDVNDNTPVF 430
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+TV+AED P +D + IT+ D NDN P+ D
Sbjct: 1048 LTVVAEDIHNPAFNDTALVTITITDANDNPPVLD 1081
>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Equus caballus]
Length = 3016
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 828 ISATDEDTGENARITYFMEDSIP----QFRIDADTGAVTTQAELDYED------------ 871
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 872 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 914
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ PG F ID +G+++T +DR++ E +
Sbjct: 403 LTVRATDGDAPPNA-NILYRLLEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQ--- 458
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T + Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 459 LTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVL 513
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++YR+ G F+I+ TG + LDR+ E + Y
Sbjct: 619 LHVQAIDADAGDNA-RLEYRL-AGVGHDFPFTINNGTGWISVAAELDRE----EVDFY-- 670
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +T+ D+NDN P F + +Y
Sbjct: 671 -------------------SFGVEARDHGTPALTASASVTVTILDVNDNNPTFTQPEY 709
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y F ++ +GIV+TL LDR++ + YI
Sbjct: 929 LQISATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQ----YI- 982
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+D+ P + +TV TV D+NDN P+F++ ++
Sbjct: 983 --LRAYAVDKGMPPARTPMEVTV------------------TVLDVNDNPPVFEQDEF 1020
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 513 LRVTASDRDKGSNA-LVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 560
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
T KE + + A+D G P LS+ + + V DINDN P+F
Sbjct: 561 T---------------KEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIF 599
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG V T LDR
Sbjct: 300 IDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDR---------------- 343
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A+D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 344 ---------ETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 388
>gi|327273598|ref|XP_003221567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Anolis carolinensis]
Length = 2829
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 30/121 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D P N + YRI++ F ID +G+V+T +DR
Sbjct: 183 LTIRATDKDAPDNANLL-YRILEPGAGEGVFEIDPHSGVVRTCAPVDR------------ 229
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGT---PQLSDACTMKITVEDINDNEPMFDRVQ 117
E E ++ V A D G P+ S T+ I+VED NDN P F +
Sbjct: 230 -------------EEVSEYHLVVEANDQGKDPGPR-SATVTVHISVEDENDNSPQFSEKR 275
Query: 118 Y 118
Y
Sbjct: 276 Y 276
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 25/89 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID +TG + TL LD +D + + + A+DNG
Sbjct: 640 QFRIDPDTGTITTLMELDYED-------------------------QASYTLAITAQDNG 674
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
PQ SD ++I + D NDN P F R +Y
Sbjct: 675 IPQKSDTTYVEILILDANDNVPRFLRDRY 703
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D NG + Y F I+ +G+++TL LDR++
Sbjct: 718 LQVSAVDRDSGPNG-RLLYTFQGGDDGDGDFYIEATSGVIRTLRKLDREN-------VAV 769
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+DR G+P L + +++TV DINDN P+F++ ++
Sbjct: 770 YSLRAFAVDR------------------GSPPLKASVDIQVTVLDINDNPPVFEQDEF 809
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 26/89 (29%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSI+ TG+V T +LDR+ T D V + V A D G
Sbjct: 105 FSINAGTGVVTTTRSLDRE----------TKDTHV---------------LQVTATDQGA 139
Query: 91 PQLSDACT-MKITVEDINDNEPMFDRVQY 118
P+ A T + +TV D ND+ P+F++ +Y
Sbjct: 140 PRHRSATTFLTVTVSDTNDHGPVFEQPEY 168
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G P ++ + ++ ITV D+NDN P F Y
Sbjct: 452 DRETVENYHFGVEARDHGIPVMTSSASVSITVLDVNDNSPTFTEKVY 498
>gi|119625349|gb|EAX04944.1| dachsous 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 2776
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 1667 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY-------ELTSS 1717
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 1718 YSLIVQATDK------------------GMPRLSNTTVIKVQVTDINDNAPAF 1752
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T LD
Sbjct: 1045 HITAHDPDEGRNGKVTYSILSG-NENMTFMLDESSGLLTTTCPLDY-------------- 1089
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ +TV D+ND P+F + Y
Sbjct: 1090 -----------EMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLY 1134
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2023 VLLHSLDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2075
>gi|431892571|gb|ELK03004.1| Protocadherin alpha-2 [Pteropus alecto]
Length = 824
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+++++TD D SN + P + KF ID TG ++T LD
Sbjct: 262 IRLNSTDADEGSNSEIVYSFSSDVPSTIKTKFKIDPSTGDIRTKGHLDY----------- 310
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I VIA DNGTP +S C + + + DINDN P
Sbjct: 311 --------------EETKSYEIQVIAYDNGTPSMSGHCKISVKLVDINDNTP 348
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR E + ++A D G P+L+ + I V D+NDNEP FD+ Y
Sbjct: 198 KSLDR---EEISGFNLLLVATDGGKPELTGTVQLLIKVLDVNDNEPTFDQSVY 247
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + V A D G+P LS ++ + V D+NDN P F + +Y
Sbjct: 414 DRESVANYELVVTARDGGSPSLSATASVTVEVADVNDNAPEFAQPEY 460
>gi|198415281|ref|XP_002124308.1| PREDICTED: similar to FAT tumor suppressor homolog 4, partial
[Ciona intestinalis]
Length = 2620
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 27/114 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D+D G ++Y + + + KF ID G ++ L + DR+ EK+ Y
Sbjct: 729 VLASDLDT-GRGCMVRYSL-RRDEDSDKFQIDPNVGTIRNLVSFDRE----EKQSY---- 778
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
++TV+A+D G+P LS + I +EDIND P F ++
Sbjct: 779 -----------------FLTVVAKDEGSPVLSTTTGVHIIIEDINDESPFFTKL 815
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ ++ V A+D G P +S + I V D NDN P+F + Y
Sbjct: 666 DFEKTSSFHLIVEAQDTGLPPVSSLANLTINVVDRNDNPPIFTKHLY 712
>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
Length = 3246
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 29/114 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D NG + YR+ + P R F I+ +G+V + LDR
Sbjct: 860 FQVVAIDLDEGPNG-QVTYRMQVGMP--RMDFLINSTSGLVTSTAVLDR----------- 905
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER E Y+ V+A D G P S T+ + V D+ND P F
Sbjct: 906 --------------ERIAEYYLRVVASDAGVPSKSSTSTLTVKVLDVNDESPTF 945
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N + YRI G + +F ID TG+
Sbjct: 2023 LQVMATDADSGLNQ-QLDYRI--EGGSQDRFLIDTTTGV--------------------- 2058
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IRV + D ER+ +TV+A D GTP LS T+ + ++D+ND P F
Sbjct: 2059 --IRVANISIDREERDA-YRLTVVAVDQGTPALSGTTTVSLFIDDVNDCRPEF 2108
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 30/111 (27%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD+D NG + Y I + PG A F I+K++G+ IT+ R
Sbjct: 2455 ATDLDEGDNG-MVTYSI-EGPGAEA-FKINKDSGL-------------------ITSRRR 2492
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+Q+ +R +TV+A D G P L + + V DINDN P+F R
Sbjct: 2493 LQSYER--------FNLTVVATDKGHPPLWGTTMLHVEVIDINDNRPVFVR 2535
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG + + G + FSID +G+++T LDR
Sbjct: 2556 EVYATDKDEGLNGAVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDR----------- 2604
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E++ + ++A D G P +++ ++DI+DNEP+F R
Sbjct: 2605 --------------EKQAVYNLIIVACDQGQPAYETMQPLQVALDDIDDNEPIFLR 2646
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D N + Y I + E F +D+ TG + T R P
Sbjct: 1483 QVRATDRDVGLNS-VLSYYITRG-NEDLTFRMDRVTGEIAT-----RPSP---------- 1525
Query: 62 DIRVQALDRDDPEREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P+RE++ + + V ED G P LS T+ +T+ D NDN P F + Y
Sbjct: 1526 -----------PDRERQSFYSLVVTVEDEGNPSLSATTTVYVTILDENDNTPAFQQQLY 1573
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IY+TV+A+D G P L+ + I V D NDN P F + Y
Sbjct: 587 IYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKASY 626
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D IQY + G KF I+ TG + L ALDR+ +K+ Y
Sbjct: 2344 LRVKATDADS-GRFALIQYSLGDGEG---KFGINPNTGDIYILSALDRE----KKDHYTL 2395
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T A+ RD+P D + + ++ + ITV DIND P F + Q+
Sbjct: 2396 T-----AVARDNPG------------DISSNRRENSVQVLITVLDINDFRPQFSKSQF 2436
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QVHATD D + G + Y P +FS+DK+TG++ LD + +R I
Sbjct: 430 LQVHATDNDVGTYG-KVSYFFSDDPD---RFSLDKDTGVILLTARLDFETTQRYTLTIIA 485
Query: 61 TD---------IRVQALDRDD--PEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
D +R+ LD +D P +KE Y+ + E+ P ++ ++ + ED + N
Sbjct: 486 RDGGGEETTGRVRINILDVNDNVPTFQKEAYLGALRENE--PSVTQVVRLRASDEDSSPN 543
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 66/178 (37%), Gaps = 70/178 (39%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIV----------KTLY-----ALD 47
V ATD D NGG + Y+I+ G KF ID+ TG++ KT Y A D
Sbjct: 1180 VRATDRDT-GNGGLVSYKILS--GAEGKFEIDESTGLITTIEYLDYETKTSYLMNVSATD 1236
Query: 48 RDDPEREKEIYITTD----------------IRVQALDRD---------DP--------- 73
+ P + + +RVQA D DP
Sbjct: 1237 QAPPNNQGFCSFSNSSYEAVIMENIPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSL 1296
Query: 74 ----------------EREK-EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+REK + Y + D+G P++ D+ + ITV D NDN P FD
Sbjct: 1297 FKINGITGVITVKGQVDREKGDFYTLTVVADDGGPKI-DSTVVTITVLDENDNSPQFD 1353
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 42 TLYALDRDDPEREKEIYIT-----TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA 96
TL ++ DP++ IT + +V A D E + + TV A DNG+P+ S
Sbjct: 2248 TLISISAVDPDKGANGQITCLEDQSAGKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAE 2307
Query: 97 CTMKITVEDINDNEPMFDRVQY 118
+ + + DINDN P+F + Y
Sbjct: 2308 IPVYLQIVDINDNNPVFSQPSY 2329
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKE---IY-ITVIAEDNGTPQLSDACTM 99
Y++ DP E ++ + + + R D E ++E Y +T+ A D G P LS +
Sbjct: 1715 YSIVAGDPLGE---FVISPVEGELRVRKDAELDRENIPFYNLTIAARDRGVPPLSSTMMV 1771
Query: 100 KITVEDINDNEPMF 113
I V DINDN+P+
Sbjct: 1772 GIRVLDINDNDPVL 1785
>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
chinensis]
Length = 2958
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 702 ISATDEDTGENARITYFMEDSIP----QFRIDADTGAVTTQAELDYED------------ 745
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 746 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 788
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ PG F ID +G+++T +DR++ E +
Sbjct: 277 LTVRATDGDAPPNA-NILYRLLEGPGAGPSEVFEIDPRSGVIRTRGPVDREEVESYQ--- 332
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T + Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 333 LTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVL 387
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++YR+ G FSI+ TG + LDR+ E + Y
Sbjct: 493 LHVQAIDADAGDNA-RLEYRL-AGVGHDFPFSINNGTGWISVAAELDRE----EVDFY-- 544
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +T+ D+NDN P F + +Y
Sbjct: 545 -------------------SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEY 583
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F ++ +GIV+TL LDR++ + Y+
Sbjct: 803 LQVSATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQ----YV- 856
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+D+ P + +TV TV D+NDN P+F++ ++
Sbjct: 857 --LRAYAVDKGMPPARTPMEVTV------------------TVLDVNDNPPVFEQDEF 894
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 387 LRVTASDRDKGSNA-LVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 434
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
T KE + V A+D G P LS+ + + V DINDN P+F
Sbjct: 435 T---------------KEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIF 473
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG V T LDR
Sbjct: 174 IDPDEGEAGRLEYTMDALFDSRSNHFFSLDPVTGAVTTAEELDR---------------- 217
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A+D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 218 ---------ETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 262
>gi|345323234|ref|XP_003430691.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Ornithorhynchus anatinus]
Length = 859
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D P+N ++YR+++ G F ID TG+V+T A+DR++ +
Sbjct: 164 LTVRASDGDAPANA-DLRYRLLEGAG--GAFEIDPRTGVVRTRAAVDREEAAEHR----- 215
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A DR D G LS T++I VED NDN P F +Y
Sbjct: 216 --LLVEADDR--------------GRDPGP--LSATATVRIAVEDENDNYPQFSEGRY 255
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR+ ER V A D+G P LS + ++ +TV D+NDN+P F + Y
Sbjct: 421 LDREARERYS---FGVEAVDHGAPALSASASVSVTVLDVNDNDPAFTQPAY 468
>gi|194389090|dbj|BAG61562.1| unnamed protein product [Homo sapiens]
Length = 915
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D N I Y + P +FS+D TG++ + LDR
Sbjct: 516 KVSAMDADSGPNA-KINYLL--GPDAPPEFSLDCRTGMLTVVKKLDR------------- 559
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 560 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 604
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 236 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 278
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 430 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 488
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 489 NDNAPVF 495
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 645 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 679
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 680 VSRSSSAKVTINVVDVNDNKPVF 702
>gi|359324191|ref|XP_851109.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked [Canis
lupus familiaris]
Length = 1308
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A D D N I Y + + AP E F++D TGI+ + LDR
Sbjct: 487 EISAMDADSGHNA-EINYLLGVDAPSE---FNLDHHTGILTVVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+D G P L T+ +T+ D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDKGMPSLITNATVSVTILDQNDNSPIFTHNEY 575
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++I+V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQISVADTNDNCPVF 249
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + + V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADVGKPPLNQSSVLLVKVKDE 459
Query: 107 NDNEPMFDR 115
NDN P+F +
Sbjct: 460 NDNAPVFTQ 468
>gi|347966213|ref|XP_321513.3| AGAP001591-PA [Anopheles gambiae str. PEST]
gi|333470161|gb|EAA00893.4| AGAP001591-PA [Anopheles gambiae str. PEST]
Length = 1896
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 26/114 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QVHA D D N ++YR+ + G KFS+DKETG + +LDR+ ++ +Y
Sbjct: 1315 FQVHAYDEDVGENA-IVRYRLKMDTMGNFRKFSLDKETGELSLAASLDRE----QQMMY- 1368
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D+R++A D+ P TP LS + + V D+NDN P F
Sbjct: 1369 --DLRIEAYDQGIP----------------TP-LSSTVDLIVYVRDVNDNLPQF 1403
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 12 SNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD 71
S ++YR+I A F +D+ TG + A+D ER + + D R AL
Sbjct: 649 SPNSAVEYRLIGAH-HSDYFHVDRRTGRLSVREAVDF---ERLESSGGSGDTRTIAL--- 701
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ A D G P L+ + + V+D+ND P+F QY
Sbjct: 702 ----------TIEAADGGEPPLTAQVEVTVYVQDVNDYAPVFLESQY 738
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYITT 61
+ A D+D + G I Y I+ + KFSID E GI++ ALDR++ E +
Sbjct: 1097 ILAKDLDS-GDFGRITY-ILDRVSSKEKFSIDPEKGILRVAGALDREETAEYMLAVEAWD 1154
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDIND 108
+ L+ + K I I V+ +++ P Q C+M +IND
Sbjct: 1155 NYPYGYLNGESRNAFKHILIHVLDDNDNVPVIQKPSGCSMITEYHNIND 1203
>gi|297676184|ref|XP_002816024.1| PREDICTED: protocadherin alpha-7 [Pongo abelii]
Length = 789
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E E+++ + A D G P+L+ + ITV DINDN P+FDR Y
Sbjct: 201 DREETPELHLLLTATDGGKPELTGTVQLIITVLDINDNAPVFDRTLY 247
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 4 HATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+A+D+D NG I + +P ++KF +D +G + + +D ++ K
Sbjct: 265 NASDLDEGLNGDIIYSFSSDVSPDIKSKFHMDPISGAITVIGHMDFEESRAHK------- 317
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
I V A D G P L+ CT+ + V D+NDN P
Sbjct: 318 ------------------IPVEAVDKGFPSLAGHCTVLVEVADVNDNAP 348
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 412 ALDR---ESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 460
>gi|291232409|ref|XP_002736151.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 2630
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 26/112 (23%)
Query: 3 VHATDVDPPS-NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V+ATD D S N Y I ++ + +F + E GIV LDR+ E
Sbjct: 1435 VYATDADHSSTNNSRFYYTIAESTNPKNQFHVGPEDGIVTISNELDRETVEYH------- 1487
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
Y+T+ A D G P L+ T ++TV DINDN P F
Sbjct: 1488 ------------------YLTIQAVDYGPPSLTGNATFQVTVLDINDNPPTF 1521
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D +NG ++Y I++ F ID GI+ T DR+
Sbjct: 567 QVLATDADVGTNG-QVEYSIVRRETADLNFRIDPNLGIITTARRFDRE------------ 613
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K IY I+V A D L C M I + D+NDN P F++ Y
Sbjct: 614 --------------VKRIYGISVAATDLAPDPLIGICQMNIEITDVNDNTPHFEQRSY 657
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
QV A D D SN I Y II+ P + F I+ TG + T DR+ K Y
Sbjct: 887 FQVTAEDADTGSNA-EITYSIIEDPETDDWNSFRINSRTGQIYTTQRFDRE----TKGSY 941
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I V++ D +R + DN SD ++I V DINDN P FD ++
Sbjct: 942 L---IEVRSQDGAPSDRTFD-------PDNPDAPNSDTAAVRIVVSDINDNAPAFDSTEF 991
>gi|262263237|tpg|DAA06614.1| TPA_inf: protocadherin gamma b12 isoform [Anolis carolinensis]
Length = 939
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER E +T+IA D GTP LS + + + DINDN P F++ Y
Sbjct: 412 DRERTPEYNVTIIATDKGTPTLSTEKIISLKISDINDNSPTFEKSSY 458
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ +EI + V A+D G+P LS T+K+ + D ND P
Sbjct: 522 DYEQSREIQVKVRAQDGGSPPLSSTATVKVFILDQNDKSP 561
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV ATD D SNG + Y P R KFS+D + G + ALD ++ ER Y+
Sbjct: 263 VQVKATDKDAGSNG-QVTYNFRNIPERARQKFSLDSKDGKITIKEALDFEESER----YL 317
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQL 93
+ V+A D ++ I V+ E++ P++
Sbjct: 318 ---VAVEARDGGGLATHSKVEIKVLDENDNAPEV 348
>gi|260832852|ref|XP_002611371.1| hypothetical protein BRAFLDRAFT_73233 [Branchiostoma floridae]
gi|229296742|gb|EEN67381.1| hypothetical protein BRAFLDRAFT_73233 [Branchiostoma floridae]
Length = 1323
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 26/94 (27%)
Query: 18 QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77
+YRII+ E KFSI+ E G++ Y D+ D E+ ++ + ++R
Sbjct: 604 RYRIIQG-NEEGKFSINPENGVI---YTADQLDYEQVRQYELIVEVR------------- 646
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D+G PQ+SD C +++ V+D NDN P
Sbjct: 647 ---------DSGVPQMSDTCLVRVFVQDENDNRP 671
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 22/115 (19%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD+D S ++Q ++ + A F I+ G+ D + E+ +
Sbjct: 154 ATDLD--SERFSVQTYTLQTSADHAPFDINIFDGV----------DGSKNVELVV----- 196
Query: 65 VQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
QALDR+ + Y + + A D G P+ D+ + + + D NDN P+F+ Y
Sbjct: 197 AQALDRE----ARSFYRLVLTAFDGGNPRRYDSQVLNVNILDTNDNSPVFEEESY 247
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG I+Y + E F ID +G ++T LDR+ IY
Sbjct: 1029 IQVSATDPDIGLNG-RIKYLLSDRDQEDGSFVIDPTSGTIRTNKGLDRE----SVAIY-- 1081
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++T IA D G+P LS ++I +ED+ND+ P F
Sbjct: 1082 -------------------HLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTF 1115
Score = 44.3 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 52 EREKEIYITTDIR---VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
ER+ + D R VQ + D E + V+A+D G P S + ++ ITV+D+ND
Sbjct: 732 ERDDNFPLAVDPRTGWVQTIKPLDREEQNRFAFQVVAKDGGVPPKSASSSVVITVQDVND 791
Query: 109 NEPMFDRVQY 118
N+P F+ Y
Sbjct: 792 NDPTFNPKYY 801
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+I+++TG + T LDR E +TV A+D G
Sbjct: 952 FTINQQTGAIITSAPLDR-------------------------ETTSGYLLTVTAKDGGN 986
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P LSD ++I+V D+NDN P F Y
Sbjct: 987 PSLSDTTDVEISVTDVNDNAPAFKNPLY 1014
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+ ATD D N I+Y II +++FSID +G V + LD
Sbjct: 607 HIRATDADQ-GNNAAIRYAIIGG-NTQSQFSIDSMSGDVSLVKPLDY------------- 651
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + + A+D G+P S+ + + V D NDN P F Q+
Sbjct: 652 ------------ESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF 696
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F +D TG+V T +LDR+ D+ Y V+A D+
Sbjct: 411 FKVDSRTGVVTTSASLDRE----------LMDVH---------------YFRVVATDDSF 445
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P S T+++ V D ND+ P F+ Q+
Sbjct: 446 PPRSGTTTLQVNVLDCNDHSPTFEAEQF 473
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 30/122 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRI----IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKE 56
+ V ATD D N I Y + I G FSI+ +TG + T LDR
Sbjct: 103 LVVSATDSDVGINA-QITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDR-------- 153
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E +TV A+D G+P LSD ++I+V D+NDN P+F
Sbjct: 154 -----------------ETASGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNP 196
Query: 117 QY 118
Y
Sbjct: 197 LY 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 26/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A+D D NG I+Y + E F+ID +G V+T LDR
Sbjct: 213 IQVSASDPDIGLNG-RIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDR------------ 259
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++T IA D G+P LS + ++I +ED+ND+ P F
Sbjct: 260 -------------ESVAVYHLTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTF 299
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,990,706,210
Number of Sequences: 23463169
Number of extensions: 79922592
Number of successful extensions: 190536
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5188
Number of HSP's successfully gapped in prelim test: 1590
Number of HSP's that attempted gapping in prelim test: 137989
Number of HSP's gapped (non-prelim): 49082
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)