BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9968
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D DP I+Y I+++P ER KF I+ TG++ T + DRD+P E
Sbjct: 108 LTVEAVDPDPDQ---VIRYSIVQSPFERPKFFINPSTGVIFTTHTFDRDEPIHE------ 158
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
K +++TV A DNG P L D CT +T+EDINDN P F++ +Y
Sbjct: 159 ----------------KFVFVTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARY 200
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 21/118 (17%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQV A D+D S + + + R F+ID TG + L DR+ E++ Y
Sbjct: 431 MQVRAFDMDGTSANNIVSFELAD---NREYFTIDPNTGNITALTTFDRE----ERDFY-- 481
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++V A D + P DNG P +I++ D ND++P F + +Y
Sbjct: 482 -NVKVIASD-NSPSS---------LFDNGEPNRGHQ-VFRISIGDKNDHKPHFQQDKY 527
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 31 FSIDKE-TGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F ID E T +KT +++D D Y+ +++ D E +KE +I + D+G
Sbjct: 769 FGIDSEATPDIKTKFSMDGD--------YLHANVQF------DREAQKEYFIPIRISDSG 814
Query: 90 TPQLSDACTMKITVEDINDN 109
P+ S + + + D+NDN
Sbjct: 815 VPRQSAVSILHLVIGDVNDN 834
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 65 VQALDRDDPEREKEIYITVIA--EDNGTPQLSDACTMKITVEDINDNEPMF 113
V+ LDRD P K + + A ED +S + +T++DINDN P
Sbjct: 683 VKTLDRDPPNGHKNWQVLIKANDEDGVGTTVSTVKEVTVTLKDINDNAPFL 733
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 25/119 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V ATD D NG ++Y I++ P ++ KF++D+ETG V T DR+
Sbjct: 989 IKVVATDEDKGVNG-QVKYSIVQQPNQKGTKFTVDEETGEVSTNKVFDREG--------- 1038
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DD K + +TV A D G P L C+ + + D+NDN P+FDR +Y
Sbjct: 1039 -----------DD---GKFVSVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKY 1083
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 27 ERAKFSIDKETGIVKTLYALDRD-DPEREKEIYITTDIRVQ-ALDRDDPEREKEIYITVI 84
E+ K + + G K Y++DR D +R+ I + +Q +LDR+ R + + ++
Sbjct: 1881 EKFKATDPDQGGKSKVSYSIDRSSDRQRQFAINQNGSVTIQRSLDREVVPRHQ---VKIL 1937
Query: 85 AEDNGTPQLSDACTMKITVEDINDNEPMF 113
A D+G+P + T+ + V+DINDN P F
Sbjct: 1938 AIDDGSPPKTATATLTVIVQDINDNAPKF 1966
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 45 ALDRDDPEREK-EIYITTD--IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
+D D+P K +I TT ++ LDRD P + TV A+D G L +++
Sbjct: 1559 GIDPDNPANSKFDINRTTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQV 1618
Query: 102 TVEDINDNEPMFDRVQY 118
++DINDN P+F + Y
Sbjct: 1619 NLKDINDNAPIFPQGVY 1635
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 16 TIQYRIIKAPGERAKFSIDKETGIVKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPE 74
T+ YR++ PG A +T T Y R D+ + +I + + D E
Sbjct: 1217 TVFYRLM--PGSTA------QTNKFHTFYLQQRPDNGDTWADIKVNHPL--------DYE 1260
Query: 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
KE +T+ E+NG QL+ T+ I +ED+ND P+F
Sbjct: 1261 SIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLF 1299
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNE 110
+ +L D E++KE I ++ +D+G+P ++ T+ + + D+NDN+
Sbjct: 2035 ISSLRSFDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVNDNK 2080
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 32/124 (25%)
Query: 1 MQVHATDVDPPSNGG------TIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPERE 54
M + A D D P+ G +I+ +I+ F I+ +TG++KT
Sbjct: 1650 MTMTAVDYDDPNEGSNARLVYSIEKNVIEEETGSPIFEIEPDTGVIKTA----------- 1698
Query: 55 KEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
V LDR ER + I V+A D G L T I V+DIND P F
Sbjct: 1699 ----------VCCLDR---ERTPDYSIQVVAMDGGG--LKGTGTASIRVKDINDMPPQFT 1743
Query: 115 RVQY 118
+ ++
Sbjct: 1744 KDEW 1747
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 24/98 (24%)
Query: 22 IKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+KA G+ A F+I +GIVK LD +D R+ +Y
Sbjct: 687 LKAQGQGAGTFNIGPTSGIVKLAKELDFED-----------------------LRQPHVY 723
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ + S + + I V D+NDN P F+ Y
Sbjct: 724 SLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDY 761
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 20/119 (16%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV+A D D + Y I+ +P K F I+ ++G + T DR+ +K Y
Sbjct: 1319 QVNAIDKDGTFPNNQVYYYIVDSPRNEGKEFFEINLQSGEIFTKTVFDRE----KKGAYA 1374
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D R NG ++ ++I + D NDN P FD+ Y
Sbjct: 1375 ---LEVEARDGAPSARPNS---------NGPNSVTKF--IRIGIADKNDNPPYFDKSLY 1419
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 31/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A+D D N G I Y + P + F I E+G + LDR E Y
Sbjct: 1098 LRVSASDEDA-DNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLKKPLDR-------ETY 1149
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+++A+ A+D G P LS ++I V D +N P++D Y
Sbjct: 1150 -----KLEAM----------------AQDKGYPPLSRTVEVQIDVVDRANNPPVWDHTVY 1188
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ LD D+ E +T A+D G P S T+++ ++ ND EP F + Y
Sbjct: 813 KQLDADNNNAYYEFIVT--AKDKGEPPKSGVATVRVYTKNKNDEEPKFSQQVY 863
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A D +N I Y II E KFSID +TG V + LD
Sbjct: 3250 LQVYAASRDIEANA-EITYSIISG-NEHGKFSIDSKTGAVFIIENLDY------------ 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E Y+TV A D GTP LSD T+ + V DINDN P+F + Y
Sbjct: 3296 -------------ESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTY 3340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D PSN I Y II + + F+ID G VK LDR
Sbjct: 3355 ITVMADDADGPSNS-HIHYSIIDG-NQGSSFTIDPVRGEVKVTKLLDR------------ 3400
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A DNG+P + T+ I V D+NDN P+F R Y
Sbjct: 3401 -------------ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNY 3445
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 33/122 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+QV ATD D N G I Y++ G +K F +D TG++ L LD
Sbjct: 2303 VQVRATDSDSEPNRG-ISYQMF---GNHSKSHDHFHVDSSTGLISLLRTLDY-------- 2350
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ ++ I V A D G P LS + + V D+NDN P+F++
Sbjct: 2351 -----------------EQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQ 2393
Query: 117 QY 118
Y
Sbjct: 2394 IY 2395
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y I+ + FSID TG+V LDR E + E +
Sbjct: 842 IQVEATDKDLGPNG-HVTYSIVT---DTDTFSIDSVTGVVNIARPLDR---ELQHEHSLK 894
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ R QA RE+ PQL +K+++ED+NDN P F
Sbjct: 895 IEARDQA-------REE-------------PQLFSTVVVKVSLEDVNDNPPTF 927
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ ATD D SN I Y ++ + E KF ++ +TG +KT LDR+
Sbjct: 3043 MQISATDADIRSNA-EITYTLLGSGAE--KFKLNPDTGELKTSTPLDRE----------- 3088
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ +Y ++ +G + A ++ +T+ED+NDN P F
Sbjct: 3089 ---------------EQAVYHLLVRATDGGGRFCQA-SIVLTLEDVNDNAPEF 3125
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M V A D D +G I+Y I G F I +ETG+++T
Sbjct: 1054 MTVSAHDEDARRDG-EIRYSIRDGSG-VGVFKIGEETGVIETS----------------- 1094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
DR D E ++TV A D G LS + I VED+NDN P
Sbjct: 1095 --------DRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAP 1137
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D D SN + Y I++ P F+ID TG + T+ +LD + E I+
Sbjct: 1792 LVIRAADADKDSNA-LLVYHIVE-PSVHTYFAIDSSTGAIHTVLSLDYE----ETSIF-- 1843
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
+ TV D GTP+L +TV DIND P+F + Y
Sbjct: 1844 -------------------HFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+ A+D D +NG + Y + ++ F+I+ ETG + TL LD
Sbjct: 2829 IQIRASDADSGTNG-QVMYSLDQSQSVEVIESFAINMETGWITTLKELDH---------- 2877
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMF 113
E+ I V+A D+G QLS + +TV D+ND+ P F
Sbjct: 2878 ---------------EKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRF 2918
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D N + I A G+ FSI++ +GI++ LDR E+
Sbjct: 3146 RVQATDADAGLNRKILYSLIDSADGQ---FSINELSGIIQLEKPLDR-------ELQAVY 3195
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ ++A+D+ P R L+ T+ ++V DINDN P+F+ +Y
Sbjct: 3196 TLSLKAVDQGLPRR-----------------LTATGTVIVSVLDINDNPPVFEYREY 3235
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+++TD+D NG + + E + F ID ETG++K L LDR+ TTD
Sbjct: 739 MNSTDLDTGFNGKLV--YAVSGGNEDSCFMIDMETGMLKILSPLDRE----------TTD 786
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + D G PQ + + + V D NDN P F + Y
Sbjct: 787 ---------------KYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESY 827
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K +Y + +P+ I+ T + + D E++ E + V DNG+P S +
Sbjct: 1173 KLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVI 1232
Query: 101 ITVEDINDNEPMF 113
+ + D NDN+P F
Sbjct: 1233 VKILDENDNKPQF 1245
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + A D D NG + Y I A F+ID TG V T LD E +Y
Sbjct: 483 MSLSAVDPDEGENG-YVTYSI--ANLNHVPFAIDHFTGAVSTSENLDY---ELMPRVYT- 535
Query: 61 TDIRVQALDRDDP-EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
+R++A D P RE E+ T IT+ ++NDN P+F+++
Sbjct: 536 --LRIRASDWGLPYRREVEVLAT------------------ITLNNLNDNTPLFEKIN 573
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ LDR+ P EK I + ++A+D G CT+ + + D NDN P F +Y
Sbjct: 2551 LEKLDRETPA-EKVISVRLMAKDAGGKVA--FCTVNVILTDDNDNAPQFRATKY 2601
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
KE +TV+A+D G P S + ITV +N P+F++ Y
Sbjct: 2148 KEYLVTVVAKDGGNPAFSAEVIVPITV--MNKAMPVFEKPFY 2187
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIF 642
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D DP G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 336 LRVVAQDPDP-GEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 390
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 391 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQY 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+ P E
Sbjct: 972 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYE----- 1025
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T A D G P L ++++TV+D+NDN P+F
Sbjct: 1026 ---------------------LTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVF 1058
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + +P R F ID +G++ T +DR+ E +
Sbjct: 444 LQLRATDGDAPPNA-NLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESYEL 502
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 503 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 549
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 556 LRVTATDKDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVMAPLDF------------ 601
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 602 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIF 642
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 706 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 752
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 911 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 957
>sp|Q9BYE9|CDHR2_HUMAN Cadherin-related family member 2 OS=Homo sapiens GN=CDHR2 PE=1 SV=2
Length = 1310
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 22/118 (18%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q H D +P +N + + ++ P FS+D +TG+++ L LDR+
Sbjct: 605 IQAHDND-EPGTNNSRLLFNLLPGPYSH-NFSLDPDTGLLRNLGPLDREAI--------- 653
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DP E I +TV+ D G P L + ITVEDINDN P+F++ Y
Sbjct: 654 -----------DPALEGRIVLTVLVSDCGEPVLGTKVNVTITVEDINDNLPIFNQSSY 700
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 29/111 (26%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+HATD D + G I Y ++ PG A F +D +G V R E+
Sbjct: 503 IHATDPDTGA-WGQITYSLL--PGNGADLFQVDPVSGTVTV----------RNGEL---- 545
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
LDR E + Y+T+ A D G LS + T++I + DINDN P+
Sbjct: 546 ------LDR---ESQAVYYLTLQATDGG--NLSSSTTLQIHLLDINDNAPV 585
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 84 IAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+A D G S+ ++ IT+ED+NDN P F
Sbjct: 899 LATDPGFQAYSNNGSLLITIEDVNDNAPYF 928
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D G + Y + R+ FSID ++G+++T ALDR+ ER
Sbjct: 345 LRVVAQDPDA-GEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAAALDRESMERH---- 399
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D+G+P+LS + +TV D ND+ P+F++ QY
Sbjct: 400 ---------------------YLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQY 438
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D +NG +QY F+I+ +GIV+T+ LDR+
Sbjct: 981 LQISATDRDAHANG-RVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE----------- 1028
Query: 61 TDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+Y +T A D G P L ++++ V+D+NDN P+F
Sbjct: 1029 ---------------AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVF 1067
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + Y II R F+ID TG ++ + LD
Sbjct: 565 LRVTATDRDKDANG-LVHYNIISG-NSRGHFAIDSLTGEIQVVAPLDF------------ 610
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
E E+E + + A+D G P LS+ + I V DIND+ P+F
Sbjct: 611 -------------EAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIF 651
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKE 56
+Q+ ATD D P N ++YR + P RA F ID +G++ T +DR+ E +
Sbjct: 453 LQLRATDGDAPPNA-NLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYEL 511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ +D + R R ++ITV+ E++ PQ S+ + ED+
Sbjct: 512 VVEASDQGQEPGPRSATVR---VHITVLDENDNAPQFSEKRYVAQVREDV 558
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V A D+G+P LS + ++ +TV D+NDN P F +Y
Sbjct: 715 DRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEY 761
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + + A DNG PQ +D +++ V D+NDN P F Y
Sbjct: 920 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHY 966
>sp|Q9BZA8|PC11Y_HUMAN Protocadherin-11 Y-linked OS=Homo sapiens GN=PCDH11Y PE=1 SV=1
Length = 1340
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 518 MKVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------ 562
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 563 -------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 607
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 239 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 281
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 433 DHEIPFRLRPVF-SNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 491
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 492 NDNAPVF 498
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 648 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 682
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 683 VSRSSSAKVTINVVDVNDNKPVF 705
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KFSI+ +TG + L ALD + R
Sbjct: 3255 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFSINPKTGGISVLEALDYETCRR------- 3305
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3306 ------------------FYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N ++Y+I++ F ID +G++ T LD
Sbjct: 2306 LQLVSTDADS-GNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2353
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2354 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2398
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3364 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3405
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3406 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3450
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ +LDR
Sbjct: 1062 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADSLDR------------ 1107
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1108 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1146
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1795 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1841 -------------EAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1887
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 745 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 792
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 793 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSY 835
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2515 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F V+Y
Sbjct: 2557 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2604
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3190 QPLDR---EQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDY 3240
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A F+I++ TG++ T LD PE + I
Sbjct: 491 LTVSASDKDKGENG-YITYSI--ASLNLLPFAINQFTGVISTTEELDFESSPETYRFI-- 545
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I V ++NDN P+F++V
Sbjct: 546 -----VRASDWGSPYRHESEVNVT------------------IRVGNVNDNSPLFEKV 580
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 850 IQVEARDKDLGSNG-EVMYSVLT---DTHQFIINSSTGIVYIADQLDRE----SKANY-- 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 900 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 935
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D SNG I+Y + + +F +D E+G +KTL LDR
Sbjct: 3048 LKVSAKDADIGSNG-DIRYSLYGSGNN--EFFLDPESGELKTLAVLDR------------ 3092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + A D G S + + + ED+NDN P+F Y
Sbjct: 3093 -------------ERVPVYNLIARATDGGGRFCSSSVLLLL--EDVNDNPPVFSSNHY 3135
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D +NG + E+ F+ID TG + TL LD
Sbjct: 2834 QVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTGWISTLKDLDH----------- 2882
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + V+A D G LS + + V DINDN P+F Y
Sbjct: 2883 --------------ETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVY 2928
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 52 EREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ E ++Y+ + LDR+ E++IY I +G +++TV D+NDN P
Sbjct: 2978 QSEWKVYVK-----RPLDRE----EQDIYFLNITASDGL--FVTQAMVEVTVSDVNDNSP 3026
Query: 112 MFDRVQY 118
+ D+V Y
Sbjct: 3027 VCDQVAY 3033
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T++A+D G P LS + IT+ +N P+FD+ Y
Sbjct: 2155 VTILAKDGGNPSLSTFVELPITI--VNKAMPVFDKPFY 2190
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K Y + +P+ I I T + + D E++ E ++ V D G+ +
Sbjct: 1181 KLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVV 1240
Query: 101 ITVEDINDNEPMF 113
+ V D NDN P F
Sbjct: 1241 VQVLDENDNRPQF 1253
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 26/89 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+ID +TG++K + LD E+ + V+A D R +
Sbjct: 2229 QFNIDFDTGVLKVISPLDY-------EVTSVYKLTVRASDALTGARAE------------ 2269
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + V+DINDN P+FD+ Y
Sbjct: 2270 -------VTVDLLVDDINDNPPVFDQPTY 2291
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV A D D N + Y + + P A+ F ID +TG++ T +D
Sbjct: 471 LQVLAHDRDEGLNSA-LTYSLAETPETHAQWFQIDPQTGLITTRSHID------------ 517
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E +TV+A D G P LS T+ +T+ D+NDNEP+FD+ Y
Sbjct: 518 -------------CETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFY 563
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
HA D D S+G + Y ++K G + F+ID +G + I
Sbjct: 901 HAHDKDSGSSG-QVTYSLVKESG-KGLFAIDARSGHL----------------------I 936
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LD + +R I V A D G P LS T+ + V+D+NDN P+F++ +Y
Sbjct: 937 LSQHLDYESSQRHTLI---VTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY 988
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 28/113 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QVHA D D SN ++Y I+ + A +GIV+T LDR EI
Sbjct: 2290 QVHAFDSDAGSNA-RLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDR-------EI---- 2337
Query: 62 DIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++IY + +IA D G PQ++ T+++ + D+NDN+P F
Sbjct: 2338 ---------------RDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTF 2375
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 48 RDDPEREKEIYITTDIRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
R RE++ + D+++ LDR E + + A D GTP L T+ IT++D+
Sbjct: 170 RLSSHRERDGVLYLDLQISGFLDR---ETTPGYSLLIEALDGGTPPLRGFMTVNITIQDV 226
Query: 107 NDNEPMFDRVQY 118
NDN+P+F++ +Y
Sbjct: 227 NDNQPIFNQSRY 238
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV+A+D+D N I YRI+ A G+ ++ D + I+
Sbjct: 1003 IQVNASDLDT-GNNARITYRIVDA-------------GVDNVTNSISSSDVSQHFGIFPN 1048
Query: 61 TD-IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ I ++A LDR+ +R + +TV+A DNGTP + + V D NDN+P F + +Y
Sbjct: 1049 SGWIYLRAPLDRETRDRYQ---LTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKY 1105
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 30/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKA--PGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
++V A D D N +I Y I+K FSID +G+++T LD +
Sbjct: 1224 VRVRAVDRDHGQNA-SITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE--------- 1273
Query: 59 ITTDIRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ IY + V A D G P +++ V D+NDN P F
Sbjct: 1274 -----------------ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTF 1312
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ A D D N + Y + A + +F+ID ++G++ T+ LDR
Sbjct: 1919 VQISAVDADLGVNARLV-YSL--ANETQWQFAIDGQSGLITTVGKLDR------------ 1963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDRVQY 118
E + V+A D G ++ A ++I V DINDN P+F+R Y
Sbjct: 1964 -------------ELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPY 2009
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 25 PGERAKFSI--DKETGIVKTLYALDRDDPEREKEIYITT---------------DIRVQA 67
PG S+ + E G++ T+ A D D+ IY T ++ +
Sbjct: 1796 PGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP 1855
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMFDRVQY 118
LDR E+ + + A D G P+ C + I VED NDN P F +Y
Sbjct: 1856 LDR---EQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1904
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV+A+D D NG ++Y I + ++ + F ID TG IYI
Sbjct: 253 LQVYASDTDADENG-LVEYAINRRQSDKEQMFRIDPRTG-----------------AIYI 294
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ALD + E + + V+A+D+G L + I V D+NDN+P +
Sbjct: 295 N-----KALDFETKELHE---LVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTIN 341
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 53 REKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
R+ IY+ I LDR E ++V+A D GTP L + ++ + + D+NDN P
Sbjct: 396 RDNSIYLV--IVHLPLDR---EIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPE 450
Query: 113 FDRVQY 118
F++ Y
Sbjct: 451 FEQDLY 456
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK---FSIDKETGIVKTLYALDRDDPEREKEI 57
+ HA+D+D G + Y I AP + + F +D E+G+V + + D + +R
Sbjct: 2829 FRAHASDLDK-GPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQR---- 2883
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSD 95
D+ + A D + + + + + D TPQ ++
Sbjct: 2884 ---YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTE 2918
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F +D + GI+ T DR+ D Q+ R++ ++ NG
Sbjct: 1714 FHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNG- 1772
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
Q D T+ ITV D+NDN P F
Sbjct: 1773 -QHFDVATIYITVGDVNDNSPEF 1794
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 70 RDDPERE-KEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
R+ +RE +E+Y + V A D GTP S ++I V D+NDN P
Sbjct: 1158 REPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAP 1201
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EI + ++A P L+ + I +ED NDN P F + Q+
Sbjct: 2233 NEIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQF 2274
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D ER V+A D G LS +K+ + D+NDN P+F
Sbjct: 623 DFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVF 662
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
A F ID+ +G + LDR E+ + ++ALD A +N
Sbjct: 1371 AAFDIDRHSGNLVVARLLDR-------EVQSEFRLEIRALD-------------TTASNN 1410
Query: 89 GTPQLSDACTMKITVEDINDNEPMF 113
PQ S A T+KI V D+NDN P +
Sbjct: 1411 --PQ-SSAITVKIEVADVNDNAPEW 1432
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 31/117 (26%)
Query: 5 ATDVDPPSNGGTIQYRIIK------APGERAK--FSIDKETGIVKTLYALDRDDPEREKE 56
ATD D +NG +QYR+I+ E+A F +D TG + LD E +E
Sbjct: 1456 ATDADTGTNG-DLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDF---EAVQE 1511
Query: 57 IYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQALD+ N T +L + T+++ + D ND+ P F
Sbjct: 1512 YLLI----VQALDQ---------------SSNVTERLQTSVTVRLRILDANDHAPHF 1549
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + L ALD
Sbjct: 3255 LSVFATSKDIGTNA-EITY-LIRSGNEQGKFRINPKTGGISVLEALDY------------ 3300
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS A T+ I + D+NDN P F + Y
Sbjct: 3301 -------------EMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3345
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+Q+ +TD D N + Y+I++ F ID +G++ T LD
Sbjct: 2306 LQLVSTDADS-GNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH----------- 2353
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + V A DNG P LS ++I + D+NDN P+F+++ Y
Sbjct: 2354 --------------ELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIY 2398
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG Q R G+R +F++D G+VK LDR
Sbjct: 3364 AEDVDSKPNG---QIRFSIVGGDRDNEFAVDPILGLVKVKKKLDR--------------- 3405
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + + A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3406 ----------ERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANY 3450
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +F+ID E+G++ LDR
Sbjct: 1062 LQVTAHDEDSGRDG-EIQYSIRDGSG-LGRFNIDDESGVITAADILDR------------ 1107
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1108 -------------ETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1146
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1795 LVIRATDADSNQNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1840
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G PQL+ +++ +E D+NDN P+F + +
Sbjct: 1841 -------------EVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1887
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+
Sbjct: 745 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDREH---------- 792
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD+ V + + D G PQ S + + VED NDN P+F + Y
Sbjct: 793 TDLYV---------------LNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSY 835
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDN 88
++D + GI K +Y+L+ D I ++ + V Q LDR E++ I+V A D
Sbjct: 3154 AVDPDVGINRKVVYSLE-DSASGVFSIDSSSGVIVLEQPLDR---EQQSSYNISVRATDQ 3209
Query: 89 GTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LS ++ ITV DINDN P+F+R Y
Sbjct: 3210 SPGQSLSSLTSVTITVLDINDNPPVFERRDY 3240
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G + Y II + +F ID I+ T ER
Sbjct: 2515 IHVRATDGDPGTYG-QVSYSIINDFA-KDRFLIDSNGQIITT---------ER------- 2556
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E +I I + A D G + CT+++ V D NDN P F ++Y
Sbjct: 2557 -------LDRENP-LEGDISIYLRALDGG--GRTTFCTVRVIVVDENDNAPQFMTLEY 2604
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALD-RDDPEREKEIYI 59
+ V A+D D NG I Y I A F+I++ TG++ T LD PE + I
Sbjct: 491 LTVSASDKDKGENG-YITYSI--ASLNLLPFAINQFTGVISTTEELDFESSPETYRFI-- 545
Query: 60 TTDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I V ++NDN P+F++V
Sbjct: 546 -----VRASDWGSPYRHESEVNVT------------------IRVGNVNDNSPLFEKV 580
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D SNG I+Y + + + F +D E+G +KTL LDR
Sbjct: 3048 LKVSAKDADIGSNG-DIRYSLYGS--GNSDFFLDPESGELKTLALLDR------------ 3092
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + A D G S T+ + +ED+NDN P+F Y
Sbjct: 3093 -------------ERVPVYNLIARATDGGGRFCSS--TVLLLLEDVNDNPPVFSSNHY 3135
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F I+ TGIV LDR+ K Y
Sbjct: 850 IQVEARDKDLGSNG-EVTYSVLT---DTHQFVINSSTGIVYIADQLDRE----SKANY-- 899
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+KI ++D+ND P F
Sbjct: 900 -SLKIEA--RDKAESGQQLFSVV--------------TLKIFLDDVNDCSPAF 935
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 43/120 (35%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D D +NG + E+ F+ID TG + TL LD
Sbjct: 2834 QVRAIDTDWGANGQVTYSLHSDSHLEKVMEAFNIDSNTGWISTLKDLDH----------- 2882
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + V+A D G LS + + V DINDN P+F Y
Sbjct: 2883 --------------ETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVY 2928
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+T++A+D GTP LS + IT+ +N P+FD+ Y
Sbjct: 2155 VTILAKDGGTPSLSTFVELPITI--VNKAMPVFDKPFY 2190
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 52 EREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ E ++Y+ + LDR+ E++IY I +G +++TV D+NDN P
Sbjct: 2978 QSEWKVYVK-----RPLDRE----EQDIYFLNITASDGL--FVTQAMVEVTVSDVNDNSP 3026
Query: 112 MFDRVQY 118
+ D+V Y
Sbjct: 3027 VCDQVAY 3033
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K Y + +P+ I I T + + D E++ E ++ V D G+ +
Sbjct: 1181 KLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVV 1240
Query: 101 ITVEDINDNEPMF 113
+ V D NDN+P F
Sbjct: 1241 VQVLDENDNKPQF 1253
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 26/89 (29%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+ID +TG++K + LD E+ + V+A D R +
Sbjct: 2229 QFNIDFDTGVLKVISPLDY-------EVMSVYKLTVRASDALTGARAE------------ 2269
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T+ + V+D+NDN P+FD+ Y
Sbjct: 2270 -------VTVDLLVDDVNDNPPVFDQPTY 2291
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +NG T++Y I + G+R++F ++ ++G++ T ALDR+
Sbjct: 711 VSATDPDLGTNG-TVKYSI--SAGDRSRFQVNAQSGVISTRMALDRE------------- 754
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EK Y + ++A D G Q + + ITV D DN P+F +V Y
Sbjct: 755 -------------EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY 798
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG T+++ + +A +R F +D +G + T+ +LDR+ E+ Y
Sbjct: 603 LMLRATDGDLGDNG-TVRFSLQEAETDRRSFRLDPVSGRLSTISSLDRE----EQAFY-- 655
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G+P S + +++ DINDN P+F VQY
Sbjct: 656 -------------------SLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY 694
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 29/118 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
Q A D D NG + Y + + P + F+I+++ G + L LD + EI
Sbjct: 913 FQAKAVDPDEGVNG-MVLYSLKQNP--KNLFAINEKNGTISLLGPLDVHAGSYQIEI--- 966
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 -----------------------LASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSY 1001
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD N G I Y IIK ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDE-GNNGLIHYSIIKGNEER-QFAIDSTSGQVTLIGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+GT L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPK 1317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ + FS+ G++ T +DR
Sbjct: 3528 MTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSLST-AGVLSTTREIDR------------ 3574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ +D+G PQ+S T+ ITV D NDN
Sbjct: 3575 -------------EQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDN 3610
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR+
Sbjct: 3426 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTAELDRE------------- 3471
Query: 63 IRVQALDRDDPEREKEIY-ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
IY ++V+A D+GTP + + ++ +T+EDINDN PM
Sbjct: 3472 -------------TLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR+ ER + + A D+G+P L+ T+ + V+D+NDN P F Y
Sbjct: 2320 QSLDRETKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAY 2369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 32/119 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V+A+D D N +I+ G ++F+I+ TG + T LDR
Sbjct: 2384 LLVNASDADASKNA------VIRIIGGNSQFTINPSTGQIITSALLDR------------ 2425
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
E + + V+ D G+P+ LS + ++ +TV D+NDN P F Y
Sbjct: 2426 -------------ETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD D N I+Y ++ G KFSI G V+ LDR
Sbjct: 2070 FKAQATDPDSGPNS-YIEYTLLNPLGN--KFSIGTIDGEVRLTGELDR------------ 2114
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2115 -------------EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALY 2159
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + LDR
Sbjct: 2174 IQVFAADGDEGTNG-QVRYGIVNG-NTNQEFRIDSVTGAITVAKPLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ ++TV A D G+ +D T+ I + DIND P+F+ Y
Sbjct: 2220 -------------EKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y I+ E + FSI+ TG ++++ LDR
Sbjct: 2688 LTVSAMDKDSGPNG-QLDYEIVNGNMENS-FSINHATGEIRSVRPLDR------------ 2733
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +T+ + D G+P S + + I + D NDN P F ++
Sbjct: 2734 -------------EKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQI 2776
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 44 YALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAEDNGTPQ-LSDACTM 99
Y+ + P+ E DR+ R + + TVIA D G PQ L D T+
Sbjct: 1137 YSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATV 1196
Query: 100 KITVEDINDNEPMF 113
+ ++DINDN P F
Sbjct: 1197 HVYMKDINDNAPKF 1210
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I+Y I + E F+I+ TGI+ ALD + ++ +
Sbjct: 3111 VSARDRDAAMNG-LIKYSI-SSGNEEGIFAINSSTGILTLAKALDYELCQKHE------- 3161
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ + V D+NDN P+F
Sbjct: 3162 ------------------MTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 5 ATDVDPPSNG-GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
ATD D SNG YRII+ E +F +D TL +P E +
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRG-NEAGRFRLDI------TL------NPSGEGAFLHL--V 203
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 204 SKGGLDR---EVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 54 EKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ ++YI ++ LDR E + + V+A D LS + + +ED+NDN P+F
Sbjct: 1049 DGQLYIKSE-----LDR---ELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLF 1100
Query: 114 DRVQY 118
+ Y
Sbjct: 1101 NSTNY 1105
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRLQD---EGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPV 352
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 25/87 (28%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
KF +D +TG + +L D + +ITV A+D
Sbjct: 3030 GKFKLDNDTGWISVASSLISD-------------------------LNQNFFITVTAKDK 3064
Query: 89 GTPQLSDACTMKITVEDINDNEPMFDR 115
G P LS T+ ITV + N + P F +
Sbjct: 3065 GNPPLSSQATVHITVTEENYHTPEFSQ 3091
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2893 QVFATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2931
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V + D G P L T+ I + D NDN P F + +Y
Sbjct: 2932 ILKYQNVTGFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKY 2988
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E+ ++ + + A D G P S + ITV D+NDN P+F
Sbjct: 2628 DFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIF 2669
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 60 TTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T DI + + L+R+D +R + I V A D+G +D + I V DINDN P F R Y
Sbjct: 2824 TGDIVISRPLNREDTDRYR---IRVSAHDSGWTVSTD---VTIFVTDINDNAPRFSRTSY 2877
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 48/118 (40%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A D D +N + Y II G F ID E+G L A R D ER +
Sbjct: 1760 MQLTAMDADEGANA-LVTYTIIS--GADDSFRIDPESG---DLIATRRLDRERRSK---- 1809
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Y ++ D+G Q SD + ITV D+ND+ P F R Y
Sbjct: 1810 -------------------YSLLVRADDGL-QSSDM-RINITVSDVNDHTPKFSRPVY 1846
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N ++Y I+ G F I + +G+V T +
Sbjct: 497 ISATDGDSGLNA-NLRYSIVSGNG-LGWFHISEHSGLVTTGSS----------------- 537
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGT-PQLSDACTMKITVEDINDNEPMFDR 115
LDR E +I + + A D G P++S A + +T+ D+ND +P+F +
Sbjct: 538 ---GGLDR---ELASQIVLNISARDQGVHPKVSYA-QLVVTLLDVNDEKPVFSQ 584
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 23/83 (27%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+I + TGI++T LDR E+ +Y+ ++Y I +
Sbjct: 1681 FTIGRHTGIIQTAAILDR---EQGACLYLV-----------------DVY--AIEKSTAF 1718
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
P+ A ++IT++DINDN P+F
Sbjct: 1719 PRTQRA-EVEITLQDINDNPPVF 1740
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + + + A+D G P S ++ I V D NDN P F
Sbjct: 1379 DFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF 1420
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 32/112 (28%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+ +D SN I Y +I ++ F+I++ TG + T +DR+
Sbjct: 814 SVSASTMDLNSN---ISY-LITTGDQKGMFAINQVTGQLTTANVIDRE------------ 857
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E+ Y + GT ++ + ITV+D+NDN P F
Sbjct: 858 --------------EQSFYQLKVVASGGT--VTGDTMVNITVKDLNDNSPHF 893
>sp|Q6WYY1|PC11X_PANPA Protocadherin-11 X-linked OS=Pan paniscus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>sp|Q71M42|PC11X_PANTR Protocadherin-11 X-linked OS=Pan troglodytes GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>sp|Q6X862|PC11X_GORGO Protocadherin-11 X-linked OS=Gorilla gorilla gorilla GN=PCDH11X
PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D +G + + P +FS+D+ TG++ + LDR
Sbjct: 487 KVSATDAD---SGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR E++ + V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDR---EKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYI 59
++V A D D +NG + Y + APG FSID +GI+ T +LD
Sbjct: 493 VRVTARDPDQGTNG-QVTYSL--APGAHTHWFSIDPTSGIITTAASLDY----------- 538
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E E + + V+A D G P L+ + T+ + ++D+NDNEP F R Y
Sbjct: 539 --------------ELEPQPQLIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFY 583
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D +NG ++ FS+D +TG++ TL ALDR
Sbjct: 1669 LTLRATDPDVGANG-----QVTYGGVSSESFSLDPDTGVLTTLRALDR------------ 1711
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++EI +TV A+D G+P T+++ VED ND+ P F
Sbjct: 1712 -------------EEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTF 1751
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V ATD D NG + Y + + + F I +TG V TL LDR
Sbjct: 1126 RVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDR------------- 1171
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E++ + V +D G+P S T+ + V D+NDN P F
Sbjct: 1172 ------------EQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTF 1211
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+ LDR E+ E +TV+A D+G+P S + ++V D+ND P F + +Y
Sbjct: 1604 VRPLDR---EQRAEHVLTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEY 1654
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D+D S GG I Y + + R F +D TG + T LDR EI+
Sbjct: 2191 LQVEADDLDQGS-GGQISYSLAASQPARGLFHVDPTTGTITTTAILDR-------EIWAE 2242
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
T + + A DR G+P L + T+ + V D NDN P
Sbjct: 2243 TRLVLMATDR------------------GSPALVGSATLTVMVIDTNDNRP 2275
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + V A D+G+P L + V D+NDN P FDR Y
Sbjct: 429 RLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLY 477
Score = 36.2 bits (82), Expect = 0.068, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ A+D D +NG +QYRI+ A F +D +G T+ LDR
Sbjct: 1772 LRASDPDVGANG-QLQYRILDGDPSGA-FVLDLASGEFGTMRPLDR-------------- 1815
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E E + + A D G P LS + +TV D ND+ P F
Sbjct: 1816 -----------EVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAF 1855
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + A D G+P + +T+ DIND+ P F++ +Y
Sbjct: 214 DRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRY 260
>sp|Q96QU1|PCD15_HUMAN Protocadherin-15 OS=Homo sapiens GN=PCDH15 PE=1 SV=2
Length = 1955
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI +I +G P + T+ I
Sbjct: 650 YAIENGDPQRVFNLSETTGILTLGKALDRESTDR----YILIITASDGRPDGTSTATVNI 705
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 706 VVTDVNDNAPVFD 718
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ A DVD G + YRI ++P + F++ TG + L +LD + P++E I
Sbjct: 839 LQIEAKDVDL---GANVSYRI-RSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASI-- 892
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D IY T+ P ++ T+ + V+D+ND P+F + Y
Sbjct: 893 --TFLVEAFD---------IYGTM------PPGIA---TVTVIVKDMNDYPPVFSKRIY 931
>sp|A7MB46|PCD18_BOVIN Protocadherin-18 OS=Bos taurus GN=PCDH18 PE=2 SV=1
Length = 1134
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>sp|Q8VHR0|PCD18_MOUSE Protocadherin 18 OS=Mus musculus GN=Pcdh18 PE=1 SV=2
Length = 1134
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRY 470
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVKELDR---ELKASYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSY 251
>sp|Q9HCL0|PCD18_HUMAN Protocadherin-18 OS=Homo sapiens GN=PCDH18 PE=2 SV=3
Length = 1135
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ E +TVIAED GTP LS + + DINDN P F R +Y
Sbjct: 424 DREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRY 470
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I V+ LDR E + + + A D G PQ S + +KI++ D NDN P F++ Y
Sbjct: 199 IVVRELDR---ELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSY 251
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + TL A D D E + Y+ D Q +D D D E +
Sbjct: 799 SEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T++A+DNG PQ SD T++I + D NDN P F
Sbjct: 859 TLTIMAQDNGIPQKSDTTTLEILILDANDNAPQF 892
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 25/91 (27%)
Query: 28 RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAED 87
R F ID TG V T LDR+ E T +RV+A+D P R YITV+
Sbjct: 293 RGYFRIDSATGAVSTDSVLDRETKE-------THVLRVKAVDYSTPPRSATTYITVL--- 342
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+D ND+ P+F++ +Y
Sbjct: 343 ---------------VKDTNDHSPVFEQSEY 358
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 912 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 963
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P TP LS + +++T+ DINDN PMF++
Sbjct: 964 YNLWALAVDRGSP----------------TP-LSASVEIQVTILDINDNAPMFEK 1001
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A+D D P N ++YR++ G F +++ +G+V T LDR
Sbjct: 373 LTIRASDRDSPINA-NLRYRVLG--GAWDVFQLNESSGVVSTRAVLDR------------ 417
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS T+ I VED NDN P F Y
Sbjct: 418 -------------EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNY 464
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D N I Y I+ +F + +GI+ + LD +D ++
Sbjct: 479 LRVQATDRDQGQNAA-IHYSILSG-NVAGQFYLHSLSGILDVINPLDFEDVQKYS----- 531
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC-TMKITVEDINDNEPMF 113
+++ A+D G P L ++ + + V D+NDNEP+F
Sbjct: 532 --------------------LSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIF 565
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++ E V A D+G+P +S + ++ ITV D+NDN+P+F + Y
Sbjct: 645 LDREEVEHYS---FGVEAVDHGSPPMSSSTSVSITVLDVNDNDPVFTQPTY 692
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 30/120 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D PSN ++YR+++ G F ID +G+V+T +DR
Sbjct: 388 LTIRATDGDAPSNA-NMRYRLLEGAG--GVFEIDARSGVVRTRAVVDR------------ 432
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-TP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E E + V A D G P LS + T+ I VED NDN P F +Y
Sbjct: 433 -------------EEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRY 479
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 32 SIDKETGI-VKTLYALDRDDPEREKEIYITTDIRVQ-ALDRD----------DPEREKEI 79
S D+ G + T+ A D D E + Y+ D Q +D D D E +
Sbjct: 814 SEDRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Query: 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + A+DNG PQ SD +++I + D NDN P F R Y
Sbjct: 874 TLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFY 912
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+++ A D D + G + Y++ ER+ F ID TG V T +LDR+
Sbjct: 280 IELRAHDPDE-GDAGRLSYQMEALFDERSNGYFLIDAATGAVTTARSLDRE--------- 329
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V + V A D+G+P+ S A + +TV D ND+ P+F++ +Y
Sbjct: 330 -TKDTHV---------------LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEY 373
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++ E V A D+G+P +S + ++ ITV D+NDN+PMF + Y
Sbjct: 660 LDREEVEHYS---FGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVY 707
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + Y F I+ +G+++T LDR++
Sbjct: 927 LQVSATDRDSGPNG-RLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN-------VAV 978
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ A+DR P LS + ++++V DINDN P+F++
Sbjct: 979 YNLWALAVDRGSPN-----------------PLSASVGIQVSVLDINDNPPVFEK 1016
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 29/119 (24%)
Query: 1 MQVHATDVD-PPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+ V+A D D PP N Q R G+ F I+ +G + L LDR
Sbjct: 2406 LTVNAYDADTPPLNS---QVRYFLKEGDSDLFRINASSGDIALLKPLDR----------- 2451
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ E +T++A D G+P L+ +++ V+DINDN+P+F+ Y
Sbjct: 2452 --------------EQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY 2496
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE----IYITVIAE 86
F+ID G +KTL DR E + +A D R + +
Sbjct: 1199 FTIDTRNGFIKTLRPFDR-------EALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVS 1251
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
DNG P+L D +K+ V D+NDN P F R Y
Sbjct: 1252 DNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPY 1283
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQVHA D D SN G + Y I+ P E F + + TGI+ R + +
Sbjct: 1624 MQVHAKDADSSSN-GLVTYEIVSGPQEL--FKLQRNTGIITFTPGPQFKQEVRYQLTLKS 1680
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNG-----TPQLSDACTMKITVEDINDNEPM 112
TD VQ+ R E+YIT+I +G PQ + +V +NEP+
Sbjct: 1681 TDEAVQS-----ERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVY---ENEPI 1729
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 70 RDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R D E + + V A+DNG P LS T+ V D+NDN P+FD + Y
Sbjct: 1984 RLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSY 2032
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 63 IRVQA-LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+RV LDR++ + +TV+A D GTP + + I V D+ND+EP+F++ +Y
Sbjct: 446 VRVNGVLDREEIGKYN---LTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY 499
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 8 VDPPSNG--GTIQYRIIK----APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
D P +G G + Y I K P R F I+ ETG++ TL +DR+ + T
Sbjct: 1513 ADDPDSGLNGKVSYAISKQEPQLPQGR-HFGINTETGVIHTLREIDRESID-------TF 1564
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V A DR P QLS + + VEDINDN P+F
Sbjct: 1565 RLTVVATDRAQPSER---------------QLSTEKLVTVIVEDINDNAPVF 1601
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG ++Y I ER FS+D+ TG + LD D
Sbjct: 3249 LTVGATDDDTGPNG-MLRYSI-SGGNERQDFSVDERTGGIVIQQQLDYD----------- 3295
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+E ++ + +D G LS + I + D+NDN P+F+ +Y
Sbjct: 3296 --------------LIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEY 3339
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATDVD +NG I+Y I+ + FSI ++TG+V+ L+
Sbjct: 2298 LQVSATDVDEGANG-RIRYSIVLG-DQNHDFSISEDTGVVRVAKNLNY------------ 2343
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMF 113
ER +TV AED D + I + DINDN P F
Sbjct: 2344 -------------ERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTF 2384
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T QY I+ ++D + +V T +P + T+ +
Sbjct: 180 ATDADVGENGVTDQYEIVAG-------NVDNKFRLVTTA------NPSGD-----TSYLH 221
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D E + + A D G+P + +T+ D+NDN P+FD Y
Sbjct: 222 LETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDY 275
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRD-DPEREKEIYI 59
M + A+D D P NGG Y++I ++ S+D+ +G+V++ + DR+ P E I +
Sbjct: 3671 MTLIASDPDLPRNGGPFTYQLIGGK-HKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEV 3729
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
ED+G P+ + ITV D NDN
Sbjct: 3730 --------------------------EDSGKPKQKSQHLLTITVLDQNDN 3753
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A DNG P L C + I + D ++N P F++ +Y
Sbjct: 3092 LTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEY 3129
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 26/90 (28%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F ID ETG + T LDR+ E +Y ++T++A+D+
Sbjct: 2537 RFHIDSETGEISTATTLDRE----ETSVY---------------------HLTLMAQDSS 2571
Query: 90 -TPQLSDACTMKITVEDINDNEPMFDRVQY 118
T + + + I+V D+NDN P FD Y
Sbjct: 2572 ITEPRASSVNLTISVSDVNDNIPKFDSTTY 2601
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 43/112 (38%), Gaps = 28/112 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y II + F ID +TG + T LDR+
Sbjct: 3567 VKAIDKDVRTQNNQFSYSIING-NLKQSFKIDVQTGEISTASRLDRE------------- 3612
Query: 63 IRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
E Y VI A D G P + + T+ I +ED+NDN P F
Sbjct: 3613 -------------ETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTF 3651
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
TD +++ +D D E + + A D G P S + I + D NDN P+FD QY
Sbjct: 2226 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQY 2283
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPG-ERA---KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
ATD D +NG ++ + + AP ER +F++D TG + T LDR
Sbjct: 623 ATDHDQGTNG-SVTFAL--APSVERLYPLQFALDALTGQLTTRRPLDR------------ 667
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDA-CTMKITVEDINDNEPMF 113
E+ + I+VIA D G P A T+ + V D+NDN+P F
Sbjct: 668 -------------EKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF 708
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M+ A+D D N + I A R F ID TG + LD +D IT
Sbjct: 1404 MRFRASDADQGVNSQVV--FSISAGNRRDTFHIDSITGSLYLHKPLDYED--------IT 1453
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + + A D GTP LS + V D NDN P+F
Sbjct: 1454 S-----------------YTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIF 1489
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query: 39 IVKTLYALDRDDPEREKEIY-----------ITTDIRVQALDRDDPEREKEIYITVIAED 87
++ + A DRD + IY IT + R D E + V A D
Sbjct: 2828 LIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAVD 2887
Query: 88 NGTPQLSDACTMKITVEDINDNEPMFDRV 116
G P ++ ++ + + D NDN P F R+
Sbjct: 2888 QGVPHMTGTASVLLHLLDKNDNPPKFTRL 2916
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 17 IQYRI--IKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDR 70
I+Y + + A G R + F ID + GI+ T LDR+ E E+ ++ AL
Sbjct: 1745 IEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEV----EVYAIALGG 1800
Query: 71 DDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
++ +TV+ +++ PQ D + ED+
Sbjct: 1801 QPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDL 1836
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+F+++ ETG++ T ++ P++ T+++ A +K TV A D+G
Sbjct: 315 QFTVNPETGVISTTERVNC--PQQ-------TNVKSSA-------SQKSCVFTVFARDHG 358
Query: 90 TPQLSDACTMKITVEDINDNEPM 112
+P+ + + + D ND++P+
Sbjct: 359 SPRQDGRTYVTVNLLDTNDHDPI 381
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 40/113 (35%), Gaps = 28/113 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ATD+D NG I Y II+ ER G+ Y R +RE+ Y
Sbjct: 1069 FALAATDIDLGDNG-RISYEIIEGNTERM-------FGVFPDGYLFVRAPLDREERDYYA 1120
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+TV D G P S + I V D NDN P F
Sbjct: 1121 --------------------LTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQF 1153
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
EI+I A D TP L + + V D NDN P+ +++ Y
Sbjct: 2777 EIWIE--AADGDTPSLRSVTLITLNVTDANDNAPVMEQLIY 2815
>sp|Q99PJ1|PCD15_MOUSE Protocadherin-15 OS=Mus musculus GN=Pcdh15 PE=1 SV=2
Length = 1943
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 44 YALDRDDPEREKEIYITTDIRV--QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKI 101
YA++ DP+R + TT I +ALDR+ +R YI ++ +G P + T+ I
Sbjct: 655 YAIENGDPQRVFNLSETTGILSLGKALDRESTDR----YILIVTASDGRPDGTSTATVNI 710
Query: 102 TVEDINDNEPMFD 114
V D+NDN P+FD
Sbjct: 711 VVTDVNDNAPVFD 723
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDD-PEREKEIYI 59
+Q+ A DVD G + YRI ++P + F++ TG + L +LD + P++E I
Sbjct: 844 LQIEAKDVD---LGANVSYRI-RSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASI-- 897
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A D IY T+ P ++ T+ + V+D+ND P+F + Y
Sbjct: 898 --TFLVEAFD---------IYGTM------PPGIA---TVTVIVKDMNDYPPVFSKRIY 936
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+Q +DR+ E++ Y +I +G Q S+ + I V D NDN P F + Y
Sbjct: 471 LQPVDRE----EQQTYTFLITAFDGV-QESEPVVVNIRVMDANDNTPTFPEISY 519
>sp|Q9BZA7|PC11X_HUMAN Protocadherin-11 X-linked OS=Homo sapiens GN=PCDH11X PE=2 SV=1
Length = 1347
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V A D D +G + + P +FS+D TG++ + LDR
Sbjct: 487 KVSAMDAD---SGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDR------------- 530
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+E + T++A+DNG P L+ T+ +++ D NDN P+F +Y
Sbjct: 531 ------------EKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY 575
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 68 LDRDDPEREKEIYIT-VIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
LDR+ EK+ Y+ V ED G PQ S ++++V D NDN P+F
Sbjct: 207 LDRE----EKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVF 249
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E KE I ++A D G P L+ + + I V+D
Sbjct: 401 DHEIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDSQTGVIRPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + + I V D+NDN+P+F
Sbjct: 651 VSRSSSAKVTINVVDVNDNKPVF 673
>sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa GN=PCDH11X PE=2 SV=1
Length = 1117
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++ A D D N I Y + AP E F++D TGI+ + LDR
Sbjct: 487 KISAMDADSGRNA-EINYLLGFDAPSE---FNLDHRTGILTAVKKLDR------------ 530
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++++ TV+A+DNG P L T+ +TV D NDN P+F +Y
Sbjct: 531 -------------EKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEY 575
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 19/94 (20%)
Query: 32 SIDKETGI----------VKTLYALDR-DDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
+ID +TGI ++++ LD + PE EK + I + LDR+ EK+ Y
Sbjct: 163 TIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQL---IVQKELDRE----EKDTY 215
Query: 81 ITVI-AEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ I ED G PQ S ++++V D NDN P+F
Sbjct: 216 VMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVF 249
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 47 DRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDI 106
D + P R + ++ + ++ D E +E I ++A D G P L+ + + I V+D
Sbjct: 401 DHEVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDE 459
Query: 107 NDNEPMF 113
NDN P+F
Sbjct: 460 NDNAPVF 466
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 25/83 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F+ID +TG+++ + DR E+++ V AED G
Sbjct: 616 FTIDPQTGVIQPNISFDR-------------------------EKQESYTFYVKAEDGGR 650
Query: 91 PQLSDACTMKITVEDINDNEPMF 113
S + I V D+NDN+P+F
Sbjct: 651 ISRSSTAKVTINVVDVNDNKPVF 673
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 32/116 (27%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYI 59
Q+HATD D N I + AK F ++ TG++ LDR++ K
Sbjct: 270 QLHATDADIGENA-KIHFYFSNLISNMAKKLFHLNSTTGLITIKEPLDREESPNHK---- 324
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMFD 114
+ V+A D G L+ A M + V DINDN P D
Sbjct: 325 ---------------------LLVLASDGG---LTPARAMVLVNVTDINDNIPSID 356
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 28/116 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D NG T++Y I + G+R++F I ++G++ T ALDR+ EK Y
Sbjct: 711 VSATDPDMGPNG-TVKYSI--SAGDRSRFQIHAKSGVISTKMALDRE----EKTAY---- 759
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V+A D G Q + + +TV D DN P+F + Y
Sbjct: 760 -----------------QLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 26/114 (22%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D NG T+++ + +A ++ F +D +G + T +LDR+ E+ Y
Sbjct: 607 ATDRDLGDNG-TVRFSLQEAENDQRLFRLDPVSGRLSTASSLDRE----EQAFYC----- 656
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++++A D G+P S + +++ DINDN P+F VQY
Sbjct: 657 ----------------LSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY 694
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
Q A D D NG + Y + + P + F+I+++ G + L ALD + EI
Sbjct: 914 QAKAVDPDEGVNG-RVLYSLKQNP--KNLFTINEQNGNISLLGALDVHAGSYQVEI---- 966
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+A D G PQLS + + + V D+NDN P+FD++ Y
Sbjct: 967 ----------------------VASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISY 1001
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 26/109 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
M + +TD D P N G Y ++ FS+ G++ T +DR
Sbjct: 3530 MTLQSTDPDLPPNQGPFNYYLLSTGPATNYFSLST-AGVLSTTREIDR------------ 3576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDN 109
E+ + Y++V+ D+G PQ+S T+ ITV D NDN
Sbjct: 3577 -------------EQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDN 3612
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +NG ++Y I+ +F ID TG + +LDR
Sbjct: 2174 IQVSAADNDEGTNG-QVRYGIVGG-NTHQEFRIDSVTGAITVAKSLDR------------ 2219
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV A D G+ +D+CT+ IT+ D+ND P+F+ Y
Sbjct: 2220 -------------ETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPY 2264
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+DVD SNG I Y I+K ER +F+ID +G V + LD
Sbjct: 1230 LRVSASDVDEGSNG-LIHYSILKGNEER-QFAIDSFSGQVTLVGKLDY------------ 1275
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
E + + A D+G L+ CT+ I + D NDN P F +
Sbjct: 1276 -------------EATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPK 1317
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T D V D E +TV+A D G P LS + + + V DINDN P+F + Y
Sbjct: 2101 TIDGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMY 2159
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I+ + + F+I+ TG ++++ LDR
Sbjct: 2690 LTVSATDKDSGPNG-QLDYEIVNG-NQESSFTINHATGEIRSIRPLDR------------ 2735
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
E+ +TV + D G+P S + + I++ D NDN P F ++
Sbjct: 2736 -------------EKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQI 2778
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 8 VDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRV- 65
V+ P N GT+ I++ D + G L Y L + + + + ++RV
Sbjct: 2266 VNVPENLGTLPRAILQVVAR------DDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVT 2319
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q+LDR E + V A D G+P L+ T+ I V+DINDN P F Y
Sbjct: 2320 QSLDR---EARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFANNMY 2369
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D + Y I + E FSI+ +TG + LDR
Sbjct: 3428 VSAFDSDSIPSWSRFSY-FIGSGNENGAFSINPQTGQITVTSGLDR-------------- 3472
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E +TV+A D+GTP + + ++ +T+EDINDN P+
Sbjct: 3473 -----------ESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL 3512
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A D D NG I Y II E F+I+ TG+V ALD + + +
Sbjct: 3113 VSARDRDTAMNG-LISYNIISG-NEEGIFAINSSTGVVTLAKALDYEMSSKHE------- 3163
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T+ A D G + C++ ++V D+NDN P+F
Sbjct: 3164 ------------------MTISATDGGWVARTGYCSLTVSVIDVNDNSPVF 3196
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 29/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +N I+YR+ E F +D ETG++ LD
Sbjct: 270 LQVAAADADEGTNA-DIRYRL---QDEGTPFQMDPETGLITVREPLDF------------ 313
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++ +TV A D G P L+ I + D+NDN+P+
Sbjct: 314 -------------EARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPV 352
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V+A D LS + + +ED+NDN P+F+ Y
Sbjct: 1059 DRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY 1105
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 32 SIDKETGIV-KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI---TVIAED 87
++DK+ G + YA + P E DR+ R + + TV A D
Sbjct: 1124 AVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFDRESLMRRRGTAVFSFTVTAMD 1183
Query: 88 NGTPQ-LSDACTMKITVEDINDNEPMF 113
G PQ L D T+ + ++DINDN P F
Sbjct: 1184 RGLPQPLKDQATVHVYMKDINDNAPKF 1210
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + + V ED G P+ + +TV+DINDN P+F Y
Sbjct: 209 DREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHY 255
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E+ ++ + + A D G P S + ITV DINDN P F+
Sbjct: 2630 DFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFE 2672
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 21/117 (17%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
QV ATD D SNG + IK+ E F I+ TG EI+
Sbjct: 2895 QVSATDPDEGSNGQVFYF--IKSQSEY--FRINATTG-----------------EIFNKQ 2933
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ Q + V A D G P L T+ I D NDN P F + +Y
Sbjct: 2934 VLKYQNVSGFSNVNINRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKY 2990
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 60 TTDIRV-QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T DI + + L+R+D +R + I V A D+G +D + I V DINDN P F R Y
Sbjct: 2826 TGDIVISRPLNREDTDRYR---IRVSAHDSGWTVSTD---VTIFVTDINDNTPRFSRPSY 2879
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 27/111 (24%)
Query: 4 HATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ TD D N + Y I A G+ +F++DK G++KTL ALDR+ + Y +
Sbjct: 1967 NVTDADDGVNS-QLSYSI--ASGDSLGQFAVDKH-GVLKTLKALDRE----SQSFY---N 2015
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ +Q D P T + + + I + D+NDN PMF
Sbjct: 2016 LVIQVHDLPQPP---------------TSRFTSTAQVSIILLDVNDNPPMF 2051
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
D E + + + A+D G P S ++ I V D NDN P F
Sbjct: 1379 DFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSF 1420
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 10 PPSNGGTIQYRIIKAPGERAK----FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRV 65
P + ++Y I+ E F+I ++TG+++T LDR E+ +Y+
Sbjct: 1656 PRGSEAPVEYYIVSVRCEEKTVGRLFTIGRQTGVIQTAAILDR---EQGACLYL------ 1706
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ + I + + P+ A ++IT++DINDN P+F
Sbjct: 1707 -------------VDVYAIEKSSAFPRTQRA-EVEITLQDINDNPPVF 1740
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
MQ+ A D D +N + Y +I G F ID E+G + LDR+
Sbjct: 1760 MQLTAMDADEGANA-LVTYALIS--GADDSFRIDPESGDLIATKRLDRE----------- 1805
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ Y ++ D+G Q SD + IT+ D+ND+ P F R Y
Sbjct: 1806 ---------------HRSKYSLLVRADDGL-QSSDM-RINITISDVNDHTPRFSRPVY 1846
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 29/116 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D NG + Y II+ FSID+ G + T +DR
Sbjct: 1440 ISVTAHDPDADING-QLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDR------------ 1486
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK---ITVEDINDNEPMF 113
E +TV A D P + +K I V D+NDN PMF
Sbjct: 1487 -------------EFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMF 1529
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 37/124 (29%)
Query: 6 TDVDPPSNGGTIQYRIIKAPGERAKFSIDKET----GIVKTLYALDRDDPEREKEIYITT 61
TD D P+ G I +I+ E+ F + + ++K ALDR
Sbjct: 383 TDADSPAANGNISVQILGG-NEQRHFEVQRSKVPNLSLIKVASALDR------------- 428
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDN-GTPQL------SDACTMKITVEDINDNEPMFD 114
ER +TV DN G P S ++ I V DIND+ P+F+
Sbjct: 429 ------------ERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFE 476
Query: 115 RVQY 118
+ Y
Sbjct: 477 QQVY 480
>sp|Q5DRF3|PCDAB_PANTR Protocadherin alpha-11 OS=Pan troglodytes GN=PCDHA11 PE=3 SV=1
Length = 949
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + V A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNGKQIKRLSLILKKSLDR---EKTPELNLMVTATDGGKPELTGTVRLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPDFDKSEY 247
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD
Sbjct: 262 LKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDY------------ 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I V A D GTP ++ CT+ + + D NDN P
Sbjct: 310 -------------EENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSP 347
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V A D G+P L + + V D+NDN P F + +Y
Sbjct: 422 LVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+V AL D E + + V A D G P L T+++ V D NDN P
Sbjct: 515 KVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAP 562
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 26/111 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N G I++ + + + SID +TGIVK L +LDR+D
Sbjct: 740 FKVTANDFDG-GNNGKIKFSLGNNQEKSSVISIDAKTGIVKLLKSLDRED---------- 788
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D+ A +IA D G P + I+VED+NDN P
Sbjct: 789 QDVHTFA---------------IIASDEGFPMRVSVTNLTISVEDVNDNPP 824
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 43 LYALDRDDPEREKEI-----YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDAC 97
++ ++R DP+ I YITT ++ LDR+ + E E+++++ D G PQL
Sbjct: 1085 MFKIERGDPQSFFRIDLTSGYITTS-GIRRLDREK-QSEHELWVSIC--DGGEPQLCSNV 1140
Query: 98 TMKITVEDINDNEPMF 113
+ + V D NDN P F
Sbjct: 1141 IVIVNVLDENDNSPTF 1156
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 15/73 (20%)
Query: 52 EREKEIYITTDI------RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
E+ EI + +D+ +++ LD + + V A D GTP S TMK+ ++D
Sbjct: 662 EQSGEITVASDLSKLMKEKLEVLD---------VQLKVSAIDAGTPVKSSVKTMKLRIKD 712
Query: 106 INDNEPMFDRVQY 118
+N++ P FD V Y
Sbjct: 713 VNNHSPQFDEVSY 725
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + +TV+A+D+G P L ++I+V D NDN P F++ +Y
Sbjct: 3139 DFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKY 3185
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
D E+ K+ + VIA+D G P L ++I VED ND+ P FD
Sbjct: 3249 DYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFD 3291
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+TV+A D + D T+ +TV D NDN P F++ Y
Sbjct: 3048 LTVVASDG---EFEDKATILVTVIDQNDNAPTFEKSTY 3082
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD+D NG I+Y I+ E A F ID +G++ T LD E+ +
Sbjct: 1807 IQVFATDLDSGLNG-LIEYSILSGNQEEA-FQIDALSGVITTKAILDY-------ELTSS 1857
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA D+ G P+LS+ +K+ V DINDN P F
Sbjct: 1858 YSLIVQATDK------------------GMPRLSNTTVIKVQVTDINDNAPAF 1892
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 27/116 (23%)
Query: 4 HATDVDP-PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
H T DP G + Y I+ E F +D+ +G++ T LD
Sbjct: 1185 HITAHDPDEGRNGKVTYSILSG-NENMTFMLDESSGLLTTTCPLDY-------------- 1229
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + + +TV+A D+GTP LS + T+ +TV D+ND P+F + Y
Sbjct: 1230 -----------EMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLY 1274
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + +LDR+ + + ++A D+G P LS + I V D+NDN P F + Y
Sbjct: 2163 VLLHSLDREASASHE---LVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY 2215
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 29/113 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+V A D D N +Q+ I+ PG + F I+ +TG V T LDR
Sbjct: 1290 RVEALDRDSGVNS-KLQFEIM--PGASFELFEINSDTGEVVTTTILDR------------ 1334
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E ++ + V+ D G P LS T+ TVED ND+ P F
Sbjct: 1335 -------------EIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEF 1374
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ALDR E +TV+ D G+P + + ++V DINDN P F
Sbjct: 796 ALDR---EHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFF 839
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 27/116 (23%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V A+D+D N ++Y II + F+I++ +G + T ALDR
Sbjct: 1395 VLASDMDA-GNNRAVEYHIIDGNTDEC-FTINEMSGELSTTRALDR-------------- 1438
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E+ + ++ D G P S +++ V D ND+ P F + Y
Sbjct: 1439 -----------EQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYY 1483
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 27/111 (24%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
A D D NG T + +A G F+ID +G +KT LDR+ + + D
Sbjct: 1502 AVDKDEGLNGQTEYFLTDEASG---AFTIDPMSGTLKTSNTLDREARSQHTFSAVARDCS 1558
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+Q S +K+ V D+NDN+P+ ++
Sbjct: 1559 IQG------------------------SRSTTVIIKVYVTDVNDNDPVLEQ 1585
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F ID G + +DR ER+ Y D+ V+A D D E +T +A G
Sbjct: 109 FRIDPHDGQICVSQDIDR---ERDPATY---DLLVEAKDGD------EQRMTHLALVKGG 156
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
LS +++ +ED+NDN P+F+ Y
Sbjct: 157 --LSAQAFVRVDLEDVNDNHPVFNPSTY 182
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
D E + + +TV A+ P S + + ITV D+NDN P F R
Sbjct: 440 DHETQPVVVLTVQAQLGSAPACS-STEVNITVMDVNDNHPAFLR 482
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD++ N I YRI+ + E FSID + G + T+ P + T
Sbjct: 2012 LTLSATDLESNEN---ISYRILSSSKE---FSIDPKNGTIFTI------SPVLLLDTIST 2059
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T V+A D G P L ++I +ED+N+ P F Y
Sbjct: 2060 TQFLVEA------------------SDGGNPDLRALTLVEIGIEDMNNYAPEFTVKSY 2099
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 28/112 (25%)
Query: 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQ 66
D+DP TI Y I+ F ID +TG++KT ER+
Sbjct: 1218 DIDPTQ---TITYNIVSG-NLVGYFEIDSKTGVIKT--------TERK------------ 1253
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR E + E + V DNG+P LS + ++V DINDN P FD+ Y
Sbjct: 1254 -LDR---ENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVY 1301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 30/118 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA-KFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+VHA D D N I+Y ++ GE F I K TGI++ +LDR
Sbjct: 3206 KVHAMDKDFGVNR-QIKYSLM---GENHDYFKISKSTGIIRLHKSLDR------------ 3249
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +TV AED G P+L T+ + + DINDN P F QY
Sbjct: 3250 -------------ETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQY 3294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 27/117 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
+V+AT +D N I Y I+ E+ KF +D TG
Sbjct: 3310 KVYATSIDIGVNAD-IHYFIMSG-NEQGKFKMDSTTG----------------------- 3344
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D+ + A D E K ++T+ A D GTP LS+ + I++ DINDN P F + Y
Sbjct: 3345 DLVLNA--TLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLY 3399
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSI KE+GI+K ALDR+ + K + A +D + +E + +I
Sbjct: 3128 FSIGKESGILKVASALDRETTPKYKLV---------AHVQDGKDFTQECFSEII------ 3172
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
ITV DINDN P+F QY
Sbjct: 3173 ----------ITVNDINDNMPIFSMAQY 3190
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+HATD D N + Y + E + F+++ TG ++ LDR
Sbjct: 896 LHATDADSGINA-QVTYAL---SVECSDFTVNATTGCLRLNKPLDR-------------- 937
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E++ + + A+D G+P LS + + V+D+NDN P+F +Y
Sbjct: 938 -----------EKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEY 982
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D NG Y + F ID +G + L +LDR
Sbjct: 2896 VKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDR------------ 2943
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
E + E VIA DNG P+ + I + D NDN P+F
Sbjct: 2944 -------------EVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVF 2983
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP-EREKEIYITVIAEDNG 89
F ID +GIVKT LD + +R E+ I +A D P R+ EI ++++
Sbjct: 551 FEIDHFSGIVKTTSLLDFETMKRNYELII------RASDWGLPYRRQTEIKLSIV----- 599
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQ 117
V+DINDN P F+RV
Sbjct: 600 -------------VKDINDNRPQFERVN 614
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D NG + Y I + +FSID + G + LDR+
Sbjct: 3414 LDVKATDEDSDVNG-LVTYNIERGD-NIGQFSIDPKNGTISVSRPLDRETISHYT----- 3466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +QA D+ DP+R ++ + I + D NDN P+F Y
Sbjct: 3467 --LEIQACDQGDPQR------------------CNSVPININILDTNDNAPIFSSSNY 3504
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 40 VKTLYALDRDDPEREKEIYITTDIRVQALDRDDP-------------EREKEIYITVIAE 86
V + A DRD K ++ +D ++ R DP ER+ E + +
Sbjct: 788 VAWIEAKDRDLGYNGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRERQNEYVLNITVY 847
Query: 87 DNGTPQLSDACTMKITVEDINDNEPMFDR 115
D G P S + + IT+ D+NDN P+ +
Sbjct: 848 DLGNPTKSTSKMLPITILDVNDNRPVIQK 876
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 23/109 (21%)
Query: 9 DPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQAL 68
DP + Y I E +F I+ ++G+ LY + D E++ +T V A+
Sbjct: 423 DPDLGKNALVYLEIVGGNEGDEFRINPDSGM---LYTAKQLDAEKKSSYTLT----VSAI 475
Query: 69 DRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
D+ + K+ + +KI+V+D+NDN+P+F+ V
Sbjct: 476 DQANVGSRKQ----------------SSAKVKISVQDMNDNDPIFENVN 508
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY-- 58
MQV A D+D NG ++Y + K GE F +D+++G + ++ + E +
Sbjct: 2157 MQVKAIDLDSAENG-EVRYELKKGNGEL--FKLDRKSGELSIKQHVEGHNRNYELTVAAY 2213
Query: 59 ---IT-----TDIRVQALDRDDPEREKEIYITVIAED 87
IT ++V+ +DR P EK+ Y + ED
Sbjct: 2214 DGAITPCSSEAPLQVKVIDRSMPVFEKQFYTVSVKED 2250
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ +L + D E + ++T+ A+D LS+ + I VE+ NDN P+ D+ Y
Sbjct: 1142 ITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVY 1195
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 29/94 (30%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QVHA D D NG I Y I G + KF ID + G + LD D+
Sbjct: 1316 FQVHAIDSDSGENG-RITYSIKSGKG-KNKFRIDSQRGHIHIAKPLDSDN---------- 1363
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLS 94
E EI+I AEDNG P+ S
Sbjct: 1364 ---------------EFEIHIK--AEDNGIPKKS 1380
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR+ E I V+AE + P + I V D NDN P FD Y
Sbjct: 2832 QTLDREQQESHNLI---VVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFY 2881
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 35 KETGIVKTLYALDRD-DPEREKEIYITTDIRVQALDRDDP-------------EREKEIY 80
+E ++ L+A DRD D + ++ T D AL R D E+ +
Sbjct: 1517 EEESVIMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHI 1576
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ V +D G P + + + V D ND+ P F
Sbjct: 1577 LIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEF 1609
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 735 ISATDEDTGENARITYFMEDSIP----QFRIDGDTGAVTTQAELDYED------------ 778
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 779 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 821
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ G+ F ID +G+++T +DR++ E K
Sbjct: 309 LTVRATDGDAPPNA-NILYRLLEGAGDSPSDAFEIDPRSGVIRTRGPVDREEVESYK--- 364
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T + Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 365 LTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVL 419
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG+V T LDR
Sbjct: 206 IDPDEGEAGRLEYTMDALFDSRSNHFFSLDPITGVVTTAEELDR---------------- 249
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A+D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 250 ---------ETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 294
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++Y + G F+I+ TG + LDR+ E + Y
Sbjct: 526 LHVQAIDADAGDNA-RLEYSL-AGVGHDFPFTINNGTGWISVAAELDRE----EVDFY-- 577
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +T+ D+NDN P F + +Y
Sbjct: 578 -------------------SFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEY 616
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y F ++ +GIV+TL LDR++ + Y+
Sbjct: 836 LQILATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQ----YV- 889
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+D+ P + +TV TV D NDN P+F++ ++
Sbjct: 890 --LRAYAVDKGMPPARTPMEVTV------------------TVLDGNDNPPVFEQDEF 927
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 419 LRVTASDRDKGSNA-LVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEP 111
T KE + + A+D G P LS+ + + V DIND P
Sbjct: 467 T---------------KEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRP 503
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
+ ATD D N + P +F ID +TG V T LD +D
Sbjct: 734 ISATDEDTGENARITYFMEDSIP----QFRIDADTGAVTTQAELDYED------------ 777
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + + A DNG PQ SD ++I V D+NDN P F R Y
Sbjct: 778 -------------QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSY 820
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D D N ++YR+ G F+I+ TG + LDR+ E + Y
Sbjct: 525 LHVQAIDADAGDNA-RLEYRL-AGVGHDFPFTINNGTGWISVAAELDRE----EVDFY-- 576
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V A D+GTP L+ + ++ +TV D+NDN P F + +Y
Sbjct: 577 -------------------SFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEY 615
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIY 58
+ V ATD D P N I YR+++ G F ID +G+++T +DR++ E +
Sbjct: 309 LTVRATDGDAPPNA-NILYRLLEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQ--- 364
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+T + Q D ++++V +++ PQ S+ + ED+ P+
Sbjct: 365 LTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVL 419
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 28/114 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A+D D SN + Y I+ R +F +D +TG + + LD Y T
Sbjct: 419 LRVTASDRDKGSNA-VVHYSIMSG-NARGQFYLDAQTGALDVVSPLD----------YET 466
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTM-KITVEDINDNEPMF 113
T KE + V A+D G P LS+ + + V DINDN P+F
Sbjct: 467 T---------------KEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIF 505
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + Y F ++ +GIV+TL LDR++ + Y+
Sbjct: 835 LQISATDRDSGLNG-RVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQ----YV- 888
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+R A+D+ P + +TV TV D+NDN P+F++ ++
Sbjct: 889 --LRAYAVDKGMPPARTPMEVTV------------------TVLDVNDNPPVFEQDEF 926
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 8 VDP-PSNGGTIQYRIIKAPGERAK--FSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
+DP G ++Y + R+ FS+D TG V T LDR
Sbjct: 206 IDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDR---------------- 249
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E + V A+D+G P+ S T+ I V D ND++P+F++ +Y
Sbjct: 250 ---------ETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEY 294
>sp|Q5DRA6|PCDGI_PANTR Protocadherin gamma-B6 OS=Pan troglodytes GN=PCDHGB6 PE=3 SV=1
Length = 930
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E+ E +T++A D G P LS + ++ + V DINDN P+FD+ Y
Sbjct: 409 ALDR---EQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSY 457
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N Y A + FS+D++TG++K + D +D ER
Sbjct: 262 LQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER------- 314
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL 93
+ V+A D + ++ I ++ E++ +P++
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEI 347
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + + A D G P S ++I+V+D NDN P+F R +Y
Sbjct: 201 DREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEY 247
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E+ + +T+ A D+G+P LS ++++ V D NDN P RV Y
Sbjct: 521 DHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAP---RVLY 564
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V AT D +N I Y +I++ E+ KF I+ +TG + LD
Sbjct: 3256 LAVFATSKDIGTNA-EITY-LIRSGNEQGKFKINPKTGGISVSEVLDY------------ 3301
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E K Y+ V A+D GTP LS T+ I + D+NDN P F + Y
Sbjct: 3302 -------------ELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVY 3346
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 29/115 (25%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGER-AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
A DVD NG I + I+ G+R +F++D G+VK LDR
Sbjct: 3365 AEDVDSQPNG-QIHFSIVN--GDRDNEFTVDPVLGLVKVKKKLDR--------------- 3406
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ER + V A D+G P +S T+ I + D+NDN P+F Y
Sbjct: 3407 ----------ERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANY 3451
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 27/112 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D +G IQY I G +FSID E+G++ LDR
Sbjct: 1063 LQVTARDEDSGRDG-EIQYSIRDGSG-LGRFSIDDESGVITAADILDR------------ 1108
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112
E ++TV A D G L + I VED+NDN P+
Sbjct: 1109 -------------ETMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPL 1147
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D N + Y+I+++ ++ F++D TG ++T+ LD
Sbjct: 1796 LVIRATDADSNRNA-LLVYQIVESTAKKF-FTVDSSTGAIRTIANLDH------------ 1841
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVE--DINDNEPMFDRVQY 118
E + V D+G+PQL+ +++ +E D+NDN P+F + +
Sbjct: 1842 -------------ETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVF 1888
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 27/118 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+++ A D D NG + I + F+ID ETG +K L +DR+ ++Y+
Sbjct: 746 LKIKAYDADSGFNGKVL--FTISDGNTDSCFNIDMETGQLKVLMPMDRE----HTDLYL- 798
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + D G PQ S + I VED NDN P+F + Y
Sbjct: 799 --------------------LNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSY 836
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 27/119 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK-APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+QV + D D +N + Y+I++ F ID +G++ T LD E+
Sbjct: 2307 LQVVSIDADSENNK-MVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDH-------ELVQ 2358
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++V+++D +G P LS + I + D+NDN P+F+++ Y
Sbjct: 2359 HCTLKVRSID------------------SGFPSLSSEVLVHIYISDVNDNPPVFNQLIY 2399
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQ-LSDACTMKITVEDINDNEPMFDRVQY 118
Q LDR E++ I+V A D Q LS T+ ITV DINDN P+F+R Y
Sbjct: 3191 QPLDR---EQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDY 3241
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD DP + G I Y II + +F ID ++ T ER
Sbjct: 2516 IHVRATDGDPGTYG-QISYAIINDFA-KDRFLIDSNGQVITT---------ER------- 2557
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
LDR++P E ++ I V A D G + CT+++ V D NDN P F V+Y
Sbjct: 2558 -------LDRENP-LEGDVSIFVRALDGG--GRTTFCTVRVIVVDENDNAPQFMTVEY 2605
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV A D D SNG + Y ++ + +F+I+ TGIV LDR+ K Y
Sbjct: 851 IQVEARDKDLGSNG-EVTYSVLT---DTQQFAINSSTGIVYVADQLDRE----SKANY-- 900
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
++++A RD E ++++ V T+K+ ++D+ND P F
Sbjct: 901 -SLKIEA--RDKAESGQQLFSVV--------------TLKVFLDDVNDCSPAF 936
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERA--KFSIDKETGIVKTLYALDRDDPEREKEIYI 59
QV A D+D +NG + E+ F+ID TG + TL LD
Sbjct: 2835 QVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDH----------- 2883
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118
E + +V+A D G LS + + V DINDN P+F + Y
Sbjct: 2884 --------------ETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEVY 2929
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 28/117 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A+D D NG I Y I A F I++ TG++ T LD E EIY
Sbjct: 492 LTVSASDKDKGENG-YITYSI--ASLNLLPFVINQFTGVISTTEELDF---ESSPEIY-- 543
Query: 61 TDIRVQALDRDDPER-EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116
V+A D P R E E+ +T I + ++NDN P+F++V
Sbjct: 544 -RFIVRASDWGSPYRHESEVNVT------------------IRIGNVNDNSPLFEKV 581
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V A D D SNG I+Y + + ++F +D E+G +KTL LDR+
Sbjct: 3049 LKVSAKDADIGSNG-YIRYSLYGS--GNSEFFLDPESGELKTLALLDRE----------- 3094
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
R+ +Y + +G + + + + +ED+NDN P+F Y
Sbjct: 3095 ---RI------------PVYSLMAKATDGGGRFCQS-NIHLILEDVNDNPPVFSSDHY 3136
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 29 AKFSIDKETG-IVKTLYALDRDDPEREKEIYITTD--------------IRVQALDRDDP 73
A +D E G ++ + A+D+D + Y+ D I +A + D
Sbjct: 2091 AAVQVDAEPGTLIYQVTAIDKDKGPNGEVTYVLQDDYGHFEINPNSGNVILKEAFNSD-- 2148
Query: 74 EREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
E +T++A+D G P LS + + IT+ +N P+FD+ Y
Sbjct: 2149 LSNIEYGVTILAKDGGKPSLSTSVELPITI--VNKAMPVFDKPFY 2191
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 52 EREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+ E ++Y+ + LDR+ E++IY I +G ++++V D+NDN P
Sbjct: 2979 QSEWKVYVK-----RPLDRE----EQDIYFLNITATDGL--FVTQAMVEVSVSDVNDNSP 3027
Query: 112 MFDRVQY 118
+ D+V Y
Sbjct: 3028 VCDQVAY 3034
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 41 KTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMK 100
K Y + +P+ I I T + + D E++ E ++ V D G +
Sbjct: 1182 KLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVV 1241
Query: 101 ITVEDINDNEPMF 113
+ V D NDN+P F
Sbjct: 1242 VQVLDENDNKPQF 1254
>sp|Q9Y5I1|PCDAB_HUMAN Protocadherin alpha-11 OS=Homo sapiens GN=PCDHA11 PE=2 SV=1
Length = 949
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 49 DDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDIND 108
D P K+I + I ++LDR E+ E+ + + A D G P+L+ + + V D+ND
Sbjct: 181 DSPTNGKQIKRLSLILKKSLDR---EKTPELNLLLTATDGGKPELTGTVRLLVQVLDVND 237
Query: 109 NEPMFDRVQY 118
N+P FD+ +Y
Sbjct: 238 NDPEFDKSEY 247
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++++ATD D NG + P R F++D+ G V+ LD
Sbjct: 262 LKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDY------------ 309
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
E K I V A D GTP ++ CT+ + + D NDN P
Sbjct: 310 -------------EENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSP 347
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR++ + + V A D G+P L + + V D+NDN P F + +Y
Sbjct: 411 ALDRENVWAYE---LVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEY 459
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+V AL D E + + V A D G P LS T+++ V D NDN P
Sbjct: 515 KVYALQPLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAP 562
>sp|Q9Y5F9|PCDGI_HUMAN Protocadherin gamma-B6 OS=Homo sapiens GN=PCDHGB6 PE=2 SV=1
Length = 930
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E+ E +T++A D G P LS + ++ + V DINDN P+FD+ Y
Sbjct: 409 ALDR---EQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSY 457
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D N Y A + FS+D++TG++K + D +D ER
Sbjct: 262 LQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER------- 314
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQL 93
+ V+A D + ++ I ++ E++ +P++
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEI 347
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E ++ + + A D G P S ++I+V+D NDN P+F R +Y
Sbjct: 201 DREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEY 247
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
D E+ + +T+ A D+G+P LS ++++ V D NDN P
Sbjct: 521 DHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAP 560
>sp|Q967F4|HMR1_CAEEL Cadherin-related hmr-1 OS=Caenorhabditis elegans GN=hmr-1 PE=1 SV=1
Length = 2920
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 1 MQVHATDVD-PPSNGGTIQYRII--KAPGERAKFSIDKETGIVKTLYALDRDDPEREKEI 57
M V A D D P + I+Y I+ K + F ID+ TG + + +LDR EI
Sbjct: 1569 MDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDR-------EI 1621
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117
E+E I V A D G P + I V D+NDN P F++ +
Sbjct: 1622 ----------------SSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTR 1665
Query: 118 Y 118
Y
Sbjct: 1666 Y 1666
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
VHATD D I YR+ + G F I K +G ++ + ALDRD P +
Sbjct: 1457 FNVHATDADQDEKSSRIVYRL-EGQGADEVFRIGKYSGTIELVKALDRDPPAGVP----S 1511
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+ VQA+D D NG +D +++ V DINDN P+F
Sbjct: 1512 WNFVVQAIDDDG---------------NGLVGYAD---VQVNVRDINDNSPIF 1546
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D +NG + R F ID++TG+ +T
Sbjct: 890 VKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGV-------------------LT 930
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V DR+ RE +TV A D G L C + V DINDN P F+R Y
Sbjct: 931 PSPHV-VFDRETRPRED---VTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSY 984
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 22/115 (19%)
Query: 6 TDVDPPSNGGTIQYRII-KAPGERAK-FSIDKETGIVKTLYALDRDDPEREKEIYITTDI 63
TD D P N + YRI+ +A GE K F ID+ TG + DR+ + ++YI T
Sbjct: 1246 TDSDGPQN--EVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDRE----KIDMYILT-- 1297
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
V+A DR ++ + NG + D ++I + D+NDN P F+ +Y
Sbjct: 1298 -VEASDRS---------VSALPGANGPNK--DNVKVQIVINDVNDNAPSFEEQKY 1340
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 31/118 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D SN ++Y +I A G R F + ++G + LD + ++ + I
Sbjct: 1355 ITIKAHDLDKHSN---LRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIA 1411
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+D R A + I +ED+NDN P F++ +Y
Sbjct: 1412 SDGRHNA----------------------------TTNVYIHIEDVNDNAPQFEQQKY 1441
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 27/89 (30%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
FSID+ TG+VK + + D E E I +TVI +D+G+
Sbjct: 798 FSIDEHTGLVKLRHGVSAADL---------------------AEAENPINLTVIVQDDGS 836
Query: 91 PQL------SDACTMKITVEDINDNEPMF 113
+ + T+ I +ED+N+N+P F
Sbjct: 837 CCVYPSKTHTSYATLLIGIEDVNNNKPEF 865
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 44 YALDRDDPEREKEIYI---TTDI--RVQALDRDDPEREKEIYITVIA-EDNGTPQLSDAC 97
Y+L+ D PE E + + +T I + LD DDP K + V A EDN +
Sbjct: 571 YSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVD--- 627
Query: 98 TMKITVEDINDNEPMFDRVQY 118
+ I ++D+NDN P F R Y
Sbjct: 628 -LTIRIDDVNDNVPTFTRPLY 647
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ + + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAINRKTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEP+F + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPIFTKEVY 164
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE ++ ITVIA + P+ S + I V D+NDN P F
Sbjct: 447 DRETLLWHNITVIATEINNPKQSSRVPLYIKVLDVNDNPPEF 488
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ + + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAINRRTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEP+F + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPIFTKEVY 164
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE ++ ITVIA + P+ S + I V D+NDN P F
Sbjct: 447 DRETLLWHNITVIATEINNPKQSSRVPLYIKVLDVNDNAPEF 488
>sp|P55280|CADH6_RAT Cadherin-6 OS=Rattus norvegicus GN=Cdh6 PE=2 SV=1
Length = 789
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ + + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAINRRTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEP+F + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPIFTKDVY 164
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE ++ ITVIA + P+ S + I V D+NDN P F
Sbjct: 447 DRETLLWHNITVIATEINNPKQSSRVPLYIKVLDVNDNAPEF 488
>sp|P97326|CADH6_MOUSE Cadherin-6 OS=Mus musculus GN=Cdh6 PE=1 SV=2
Length = 790
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ + + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAVNRRTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEP+F + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPIFTKDVY 164
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE ++ ITVIA + P+ S + I V D+NDN P F
Sbjct: 447 DRETLLWHNITVIATEINNPKQSSRVPLYIKVLDVNDNAPEF 488
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 41 KTLYALD-RDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI-AEDNGTPQLSDACT 98
++++ LD + PE EK + I Q LDR+ +K+ Y+ I ED GTPQ S
Sbjct: 185 QSVFGLDIVETPEGEKWPQL---IVQQNLDRE----QKDTYVMKIKVEDGGTPQKSSTAI 237
Query: 99 MKITVEDINDNEPMFDRVQ 117
+++TV D+NDN P+F Q
Sbjct: 238 LQVTVSDVNDNRPVFKEGQ 256
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 25/88 (28%)
Query: 31 FSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGT 90
F +D++TG++ DR++ ER TV A DNGT
Sbjct: 515 FDLDRKTGVLTASRVFDREEQER-------------------------FIFTVTARDNGT 549
Query: 91 PQLSDACTMKITVEDINDNEPMFDRVQY 118
P L + +TV D NDN P F +
Sbjct: 550 PPLQSQAAVIVTVLDENDNSPKFTHNHF 577
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 34 DKETGI-VKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ 92
DK+T + K + ++R+ P K +Y ++ D E KE ++A D+G P
Sbjct: 390 DKDTDVNGKVICFIEREVPFHLKAVY-DNQYLLETSSLLDYEGTKEFSFKIVASDSGKPS 448
Query: 93 LSDACTMKITVEDINDNEPMFDR 115
L+ +++ +ED NDN P+F++
Sbjct: 449 LNQTALVRVKLEDENDNPPIFNQ 471
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 32/117 (27%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+Q+HATD D SN I+Y AP + F+++ TG++ +LDR++ K
Sbjct: 272 IQLHATDADIGSNA-EIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHK--- 327
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAED-NGTPQLSDACTMKITVEDINDNEPMFD 114
+TV+A D + TP + T+ I V D+NDN P D
Sbjct: 328 ----------------------VTVLASDGSSTPARA---TVTINVTDVNDNPPNID 359
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 25/83 (30%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
F +D +G++K+ + DR E++ T D++ A D G
Sbjct: 617 NFVLDPYSGVIKSNVSFDR-----EQQSSYTFDVK--------------------ATDGG 651
Query: 90 TPQLSDACTMKITVEDINDNEPM 112
P S + I V D+NDN P+
Sbjct: 652 QPPRSSTAKVTINVMDVNDNSPV 674
>sp|Q90762|CADH6_CHICK Cadherin-6 OS=Gallus gallus GN=CDH6 PE=2 SV=1
Length = 790
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 31/122 (25%)
Query: 1 MQVHATDVDPPSNGGT--IQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIY 58
+QV ATD D P+ G + + Y I++ + FS++ ETGI+KT
Sbjct: 179 VQVTATDADDPTYGNSAKVVYSILQG---QPYFSVESETGIIKT---------------- 219
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRV 116
AL D E ++ + + A+D G LS T+ IT+ D+NDN P F +
Sbjct: 220 --------ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQS 271
Query: 117 QY 118
Y
Sbjct: 272 TY 273
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 35/109 (32%)
Query: 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRD--- 71
G+++Y I+ G F I++ TG ++ LDR+ EK +YI +R QA++R
Sbjct: 86 GSLKY-ILSGDGAGDLFIINENTGDIQATKRLDRE----EKPVYI---LRAQAINRRTGR 137
Query: 72 --DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+PE E I + DINDNEPMF + Y
Sbjct: 138 PVEPESE----------------------FIIKIHDINDNEPMFTKDVY 164
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 EREKEIY--ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+RE ++ ITVIA + P+ S + I V D+NDN P F
Sbjct: 447 DRETLLWHNITVIAAEINNPKQSSRVPVFIKVLDVNDNAPEF 488
>sp|P58365|CAD23_RAT Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1
Length = 3317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 29/113 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + YR+ + P R F I+ +G+V T LDR
Sbjct: 909 QVVAIDLDEGLNG-LVSYRMQVGMP--RMDFVINSTSGVVTTTAELDR------------ 953
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER E + V+A D GTP S T+ I V D+ND P F
Sbjct: 954 -------------ERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTF 993
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG ++Y +K+ G R F+ID +G+++T LDR
Sbjct: 2632 EVYATDKDEGLNGA-VRYSFLKSTGNRDWEYFTIDPISGLIQTAQRLDR----------- 2679
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDR 115
E++ + ++A D G P + +++ +EDI+DNEP+F R
Sbjct: 2680 --------------EKQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVR 2722
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+Q+ ATD D NG + YRI G + +F I TG+++ A
Sbjct: 2087 LQITATDEDSGLNGELV-YRI--EAGAQDRFLIHPVTGVIRVGNA--------------- 2128
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+DR++ E + +TV+A D GT LS T+ I ++DIND+ P F
Sbjct: 2129 ------TIDREEQESYR---LTVVATDRGTVPLSGTATVTILIDDINDSRPEF 2172
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +GG + YRI+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1229 VRATDRDT-GDGGLVNYRILS--GAEGKFEIDESTGLIVTVDYLDYE----TKTSYL--- 1278
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D P + +Y+T++ E + Q S+A + +E++
Sbjct: 1279 MNVSATDGAPPFNQGFCSVYVTLLNELDEAVQFSNASYEAVIMENL 1324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 30/111 (27%)
Query: 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIR 64
ATD D SNG + Y + + PG A FS+D ++G+V TT
Sbjct: 2531 ATDQDEGSNG-QLTYSL-EGPGMEA-FSVDMDSGLV-------------------TTQRP 2568
Query: 65 VQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+Q+ +R + +TV+A D G P L + + V D+NDN P+F R
Sbjct: 2569 LQSYERFN--------LTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVR 2611
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
++V ATD D N I+Y ++ G KF+I+ TG + L +LDR+ +K+ YI
Sbjct: 2420 LRVTATDADS-GNFALIEYSLVDGEG---KFAINPNTGDIYVLSSLDRE----KKDHYIL 2471
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T AL +D+P D + + ++ + I V D+ND P F + Q+
Sbjct: 2472 T-----ALAKDNP------------GDVASNRRENSVQVVIRVLDVNDCRPQFSKPQF 2512
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D ER+ ++ V ED GTP LS + +T+ D NDN P+F + Y
Sbjct: 1591 DRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHY 1637
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV A DNG+P + + + + DINDN P+FD++ Y
Sbjct: 2359 DYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQLSY 2405
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 26/120 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF--SIDKETGIVKTLYALDRDDPEREKEIY 58
+++ ATD D P N I Y I+ A + F S+ + G++ LD +
Sbjct: 579 VRLRATDEDSPPNN-LITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYEQIP------ 631
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
IY+TV+A+D G P L + I V D NDN P F + Y
Sbjct: 632 -----------------NGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAY 674
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 33/143 (23%)
Query: 1 MQVHATDVDPPSNGG--TIQYRIIKAPGERAKFS-IDKETGIVKTL-------------- 43
M V ATD PP N G ++ ++ E +FS E I++ L
Sbjct: 1279 MNVSATDGAPPFNQGFCSVYVTLLNELDEAVQFSNASYEAVIMENLALGTEIVRVQAYSI 1338
Query: 44 -------YALDRDDPEREKEIY----ITTDIRVQALDRDDPEREK-EIYITVIAEDNGTP 91
Y D + K ++ IT I V+ L +REK + Y + D+G P
Sbjct: 1339 DNLNQITYRFDAYTSAQAKALFKIDAITGVITVKGL----VDREKGDFYTLTVVADDGGP 1394
Query: 92 QLSDACTMKITVEDINDNEPMFD 114
++ + +TV D NDN P FD
Sbjct: 1395 KVDSTVKVYVTVLDENDNSPRFD 1417
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 70 RDDPEREKEIY----ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R D E ++E +T+ A D G P LS + I V DINDN+P+
Sbjct: 1802 RKDVELDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVL 1849
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 24/117 (20%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D N + + I ERA F I+ TGIV LDR ER E +T
Sbjct: 1870 HVLASDADSGCNA-LLTFNITAGNRERA-FFINATTGIVTVNRPLDR---ERIPEYRLTV 1924
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D+PE + IA D + +++ D NDN P+F Y
Sbjct: 1925 SVK------DNPENPR------IAR-------KDFDLLLVSLADENDNHPLFTEGTY 1962
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 27/89 (30%)
Query: 30 KFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDNG 89
+FS+DK+TG++ + LD + +R +TVIA D G
Sbjct: 503 RFSLDKDTGLIMLIARLDYELIQR-------------------------FTLTVIARDGG 537
Query: 90 TPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ + ++I V D+NDN P F + Y
Sbjct: 538 GEETT--GRVRINVLDVNDNVPTFQKDAY 564
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 37 TGIVKTLYALDRDDPEREKEIYITTDIRVQAL-DRDDPEREKEIYITV----IAEDNGTP 91
+G +++ALD YI+ + + L DR++P +TV + +D
Sbjct: 277 SGNTNSIFALD----------YISGALTLNGLLDRENPLYSHGFILTVKGTELNDDRSPS 326
Query: 92 QLSDACTMKITVEDINDNEPMFDRVQY 118
+ T I V DINDN P F+ +Y
Sbjct: 327 DATVTTTFNILVIDINDNAPEFNSSEY 353
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 23/115 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V A D+D NG T+ Y I+ A F I++ TG++ LD + + +T
Sbjct: 1653 ITVQALDLDEGPNG-TVTYAIV-AGNIINTFRINRRTGVITAAKELDYEISHGRYTLIVT 1710
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ L +L+ T+ + V DINDN P F R
Sbjct: 1711 ATDQCPILSH---------------------RLTSTTTVLVNVNDINDNVPTFPR 1744
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 26/119 (21%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYA-LDRDDPEREKEIYITT 61
V A D D NG T+ Y I + P + +S++ TG ++T + LDR++P
Sbjct: 798 VVAVDPDLGKNG-TLVYSI-QPPNKF--YSLNSTTGKIRTTHVMLDRENP---------- 843
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
D E E I V D G P L + + T+ + + D+NDN+P F + +
Sbjct: 844 ---------DPVEAELMRKIIVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPF 893
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D G Q II + ++F I+ +G + T LDR
Sbjct: 689 LFLNATDLDRSREYG--QESIIYSLEGSSQFRINARSGEITTTSLLDR------------ 734
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRVQY 118
E + E + V A D G Q + T+ +T+ DINDN P + Y
Sbjct: 735 -------------ETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPY 781
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 23/98 (23%)
Query: 21 IIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80
I A KFS+ +V+T+ LDR E + ++A+D
Sbjct: 1031 FITAGNVDGKFSVGYRDAVVRTVVGLDR-------ETTAAYTLVLEAIDN---------- 1073
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ V GT T+ +TV D+NDN P+F + Y
Sbjct: 1074 VPVGKRRTGT------ATVFVTVLDVNDNRPIFLQSSY 1105
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114
+ ++A D GTP +++T+ D+NDN P+ +
Sbjct: 1493 LKIVASDRGTPPRKKDHILQVTILDVNDNPPVIE 1526
>sp|Q9UN74|PCDA4_HUMAN Protocadherin alpha-4 OS=Homo sapiens GN=PCDHA4 PE=2 SV=1
Length = 947
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR E EI++ + A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 198 KSLDR---EEAPEIFLVLTATDGGKPELTGTVQLLITVLDANDNAPAFDRTIY 247
Score = 35.8 bits (81), Expect = 0.091, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 412 ALDR---ESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 460
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+V AL D E + + V A D G P L T+++ V D NDN P
Sbjct: 516 KVYALQPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAP 563
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETG--IVKTLYALDRDDPEREKEI 57
++++A+D+D NG + + +P ++KF ID TG IVK
Sbjct: 262 IKLNASDLDEGLNGDIVYSFSNDISPNVKSKFHIDPITGQIIVKG--------------- 306
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
YI D E K I V D G LS C + + VED NDN P
Sbjct: 307 YI------------DFEESKSYEIIVEGIDKGQLPLSGHCRVIVEVEDNNDNVP 348
>sp|Q5DRE8|PCDA4_PANTR Protocadherin alpha-4 OS=Pan troglodytes GN=PCDHA4 PE=3 SV=1
Length = 947
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++LDR E EI++ + A D G P+L+ + ITV D NDN P FDR Y
Sbjct: 198 KSLDR---EEAPEIFLVLTATDGGKPELTGTVQLLITVLDANDNAPAFDRTIY 247
Score = 35.4 bits (80), Expect = 0.092, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
ALDR E + V A D G+P L ++ + V D+NDN P F + +Y
Sbjct: 412 ALDR---ESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEY 460
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
+V AL D E + + V A D G P L T+++ V D NDN P
Sbjct: 516 KVYALQPLDHEELELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAP 563
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 30/114 (26%)
Query: 1 MQVHATDVDPPSNGGTI-QYRIIKAPGERAKFSIDKETG--IVKTLYALDRDDPEREKEI 57
++++A+D+D NG I + +P ++KF ID TG IVK
Sbjct: 262 IKLNASDLDEGLNGDIIYSFSNDISPNVKSKFHIDPITGQIIVKG--------------- 306
Query: 58 YITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
YI D E K I V D G LS C + + VED NDN P
Sbjct: 307 YI------------DFEESKSYEIIVEGIDKGQLPLSGHCRVIVEVEDNNDNVP 348
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 29/113 (25%)
Query: 2 QVHATDVDPPSNGGTIQYRI-IKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
QV A D+D NG + YR+ + P R F I+ +G+V T LDR
Sbjct: 911 QVVAIDLDEGLNG-LVSYRMPVGMP--RMDFLINSSSGVVVTTTELDR------------ 955
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
ER E + V+A D GTP S T+ I V D+ND P F
Sbjct: 956 -------------ERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTF 995
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTD 62
V ATD D +GG + YRI+ G KF ID+ TG++ T+ LD + K Y+
Sbjct: 1231 VQATDRDS-GDGGLVNYRILS--GAEGKFEIDESTGLIITVNYLDYE----TKTSYM--- 1280
Query: 63 IRVQALDRDDPEREK--EIYITVIAEDNGTPQLSDACTMKITVEDI 106
+ V A D+ P + +YIT++ E + Q S+A +E++
Sbjct: 1281 MNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAILENL 1326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 73 PEREKEIYITVIA--EDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
P+RE++ + ++A ED GTP LS + +T+ D NDN PMF + Y
Sbjct: 1592 PDRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHY 1639
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+QV ATD D NG + YRI G + +F I TG+++ A
Sbjct: 2089 LQVTATDEDSGLNGELV-YRI--EAGAQDRFLIHLVTGVIRVGNA--------------- 2130
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
+DR++ E + +TV+A D GT LS + I ++DIND+ P F
Sbjct: 2131 ------TIDREEQESYR---LTVVATDRGTVPLSGTAIVTILIDDINDSRPEF 2174
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 29/117 (24%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGER--AKFSIDKETGIVKTLYALDRDDPEREKEIYI 59
+V+ATD D NG ++Y +K G R F ID +G+++T LDR
Sbjct: 2634 EVYATDKDEGLNGA-VRYSFLKTAGNRDWEFFIIDPISGLIQTAQRLDR----------- 2681
Query: 60 TTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACT-MKITVEDINDNEPMFDR 115
E + + ++A D G P + +++ +EDI+DNEP+F R
Sbjct: 2682 --------------ESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVR 2724
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 26/120 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKF--SIDKETGIVKTLYALDRDDPEREKEIY 58
+++ ATD D P N I Y I+ A + F S+ + G++ LD +
Sbjct: 581 VRLRATDEDSPPNN-QITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQ-------- 631
Query: 59 ITTDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
I+ + IY+TV+A D G P L+ + I V D NDN P F + Y
Sbjct: 632 ISNGL---------------IYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAY 676
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 33/143 (23%)
Query: 1 MQVHATDVDPPSNGG--TIQYRIIKAPGERAKFS-IDKETGIVKTL-------------- 43
M V ATD PP N G ++ ++ E +FS E I++ L
Sbjct: 1281 MNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSI 1340
Query: 44 -------YALDRDDPEREKEIY----ITTDIRVQALDRDDPEREK-EIYITVIAEDNGTP 91
Y + + K ++ IT I VQ L +REK + Y + D+G P
Sbjct: 1341 DNLNQITYRFNAYTSTQAKALFKIDAITGVITVQGL----VDREKGDFYTLTVVADDGGP 1396
Query: 92 QLSDACTMKITVEDINDNEPMFD 114
++ + ITV D NDN P FD
Sbjct: 1397 KVDSTVKVYITVLDENDNSPRFD 1419
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + ATD D NG + Y + + PG A F +D ++G+V T +R + Y
Sbjct: 2529 ITMMATDQDEGPNG-ELTYSL-EGPGVEA-FHVDMDSGLVTT---------QRPLQSY-- 2574
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
++ +TV+A D G P L + + V D+NDN P+F R
Sbjct: 2575 ----------------EKFSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVR 2613
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D N I+Y + GE +KF+I+ TG + L +LDR+ +K+ YI
Sbjct: 2422 LTVTATDADS-GNFALIEYSL--GDGE-SKFAINPTTGDIYVLSSLDRE----KKDHYIL 2473
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
T AL +D+P D + + ++ + I V D+ND P F + Q+
Sbjct: 2474 T-----ALAKDNP------------GDVASNRRENSVQVVIQVLDVNDCRPQFSKPQF 2514
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 72 DPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
D E + TV A DNG+P + + + + DINDN P+FD+ Y
Sbjct: 2361 DYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSY 2407
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 26/119 (21%)
Query: 3 VHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYA-LDRDDPEREKEIYITT 61
V A D D NG T+ Y I + P + +S++ TG ++T +A LDR++P
Sbjct: 800 VVAVDPDLGENG-TLVYSI-QPPNKF--YSLNSTTGKIRTTHAMLDRENP---------- 845
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQL--SDACTMKITVEDINDNEPMFDRVQY 118
D + E ++I ++V D G P L + + T+ + + D+NDN+P F + +
Sbjct: 846 -------DPHEAELMRKIVVSV--TDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPF 895
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 70 RDDPEREKEIY----ITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113
R D E ++E +T+ A D G P LS + I V DINDN+P+
Sbjct: 1804 RKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVL 1851
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 49/117 (41%), Gaps = 24/117 (20%)
Query: 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITT 61
V A+D D N + + I ERA F I+ TGIV LDR ER E +T
Sbjct: 1872 HVLASDADSGCNA-RLTFNITAGNRERA-FFINATTGIVTVNRPLDR---ERIPEYKLTI 1926
Query: 62 DIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
++ D+PE + IA D + I + D NDN P+F + Y
Sbjct: 1927 SVK------DNPENPR------IAR-------RDYDLLLIFLSDENDNHPLFTKSTY 1964
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 19/89 (21%)
Query: 37 TGIVKTLYALDRDDPEREKEIYITTDIRVQAL-DRDDPEREKEIYITVIA---EDNGTPQ 92
+G +++ALD YI+ + + L DR++P +TV D+ TP
Sbjct: 277 SGNTNSIFALD----------YISGVLTLNGLLDRENPLYSHGFILTVKGTELNDDRTP- 325
Query: 93 LSDAC---TMKITVEDINDNEPMFDRVQY 118
SDA T I V DINDN P F+ +Y
Sbjct: 326 -SDATVTTTFNILVIDINDNAPEFNSSEY 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ V ATD D G + Y P +FS+DK+TG++ + LD + +R I
Sbjct: 480 LTVLATDNDA-GTFGEVSYFFSDDPD---RFSLDKDTGLIMLIARLDYELIQRFTLTIIA 535
Query: 61 TD---------IRVQALDRDD--PEREKEIYITVIAEDNGTPQLSDACTMKITVED 105
D +R+ LD +D P +K+ Y+ + E+ P ++ ++ T ED
Sbjct: 536 RDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENE--PSVTQLVRLRATDED 589
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 23/115 (20%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ + A D+D NG T+ Y I+ A F ID+ G++ LD + + +T
Sbjct: 1655 ITIQALDLDEGPNG-TVTYAIV-AGNIVNTFRIDRHMGVITAAKELDYEISHGRYTLIVT 1712
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115
+ L +L+ T+ + V DINDN P F R
Sbjct: 1713 ATDQCPILSH---------------------RLTSTTTVLVNVNDINDNVPTFPR 1746
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 41 KTLYALDRDDPEREKEIYITTD-----IRVQALDRDDPEREKEIYIT-VIAEDNGTPQLS 94
+ +++L + EI T D + LDR+ E + YI V+A D GTP
Sbjct: 1453 QVVFSLASGNIAGAFEIVTTNDSIGEVFVARPLDRE----ELDHYILQVVASDRGTPPRK 1508
Query: 95 DACTMKITVEDINDNEPMFD 114
+++T+ DINDN P+ +
Sbjct: 1509 KDHILQVTILDINDNPPVIE 1528
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYIT 60
+ ++ATD+D G Q II + +F I+ +G + T LDR
Sbjct: 691 LFLNATDLDRSREYG--QESIIYSLEGSTQFRINARSGEITTTSLLDR------------ 736
Query: 61 TDIRVQALDRDDPEREKEIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPMFDRVQY 118
E + E + V A D G Q + T+ IT+ DINDN P + Y
Sbjct: 737 -------------ETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPY 783
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 27/92 (29%)
Query: 29 AKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN 88
KFS+ +V+T+ LDR+ TT + L+ A DN
Sbjct: 1041 GKFSVGYRDAVVRTVVGLDRE----------TTAAYMLILE---------------AIDN 1075
Query: 89 G--TPQLSDACTMKITVEDINDNEPMFDRVQY 118
G + + T+ +TV D+NDN P+F + Y
Sbjct: 1076 GPVGKRHTGTATVFVTVLDVNDNRPIFLQSSY 1107
>sp|Q9Y5G4|PCDG9_HUMAN Protocadherin gamma-A9 OS=Homo sapiens GN=PCDHGA9 PE=2 SV=1
Length = 932
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 63 IRVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ Q LDR E+ E ITV A D GTP LS + + V DINDN P F + Y
Sbjct: 405 LTAQILDR---EKASEYNITVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASY 457
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 66 QALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118
+ALDR++ ++ + A D G P+ S + +TV D NDN P+F + Y
Sbjct: 198 RALDREEATAH---HLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIY 247
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 67 ALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111
AL D E+ +++ + V A D+G+P LS ++++ V D NDN P
Sbjct: 516 ALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVLDQNDNAP 560
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,695,689
Number of Sequences: 539616
Number of extensions: 1936970
Number of successful extensions: 5439
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 3444
Number of HSP's gapped (non-prelim): 1822
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)