Query psy9968
Match_columns 118
No_of_seqs 156 out of 1155
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:19:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yqg_A Desmoglein-2, HDGC; cad 99.9 6.6E-24 2.2E-28 139.4 4.6 88 2-116 33-123 (123)
2 2yst_A Protocadherin-7; BH-PCD 99.9 2.4E-23 8.3E-28 135.7 5.9 84 2-111 35-119 (119)
3 1ncg_A N-cadherin; cell adhesi 99.9 7.1E-23 2.4E-27 132.0 7.2 85 3-113 23-110 (110)
4 2qvi_A Cadherin-2; beta barrel 99.9 3.9E-21 1.3E-25 136.6 11.2 91 2-118 20-113 (215)
5 2x2u_A Proto-oncogene tyrosine 99.8 8.1E-22 2.8E-26 142.7 5.2 85 2-114 160-245 (246)
6 2a4e_A Cadherin-11; dimer, cal 99.8 2.1E-20 7.2E-25 133.0 10.2 87 4-118 25-112 (215)
7 3q2w_A Cadherin-2; cell adhesi 99.8 1.5E-19 5.1E-24 143.5 12.4 92 2-118 359-451 (559)
8 2a4e_A Cadherin-11; dimer, cal 99.8 1.1E-19 3.7E-24 129.3 9.6 82 2-112 128-215 (215)
9 3qrb_A Cadherin-1; cell adhesi 99.8 1.5E-19 5.3E-24 127.9 9.8 85 8-118 26-113 (213)
10 2a62_A Cadherin-8; extracellul 99.8 6.4E-20 2.2E-24 137.3 8.2 88 2-118 127-220 (322)
11 3lnd_A CDH6 protein, cadherin 99.8 5.5E-21 1.9E-25 134.9 1.9 87 4-118 24-111 (207)
12 3k5r_A Cadherin 13; mouse, str 99.8 1.3E-19 4.5E-24 128.7 8.3 86 3-118 25-113 (218)
13 3q2v_A Cadherin-1; cell adhesi 99.8 3.7E-19 1.3E-23 141.0 11.6 91 2-117 353-445 (550)
14 3ppe_A Vascular endothelial ca 99.8 2.2E-19 7.5E-24 126.5 9.1 83 6-118 26-109 (203)
15 1wyj_A Protocadherin beta 14; 99.8 1.8E-20 6.2E-25 123.4 0.6 88 2-118 29-120 (125)
16 3ubh_A Neural-cadherin; cell a 99.8 1.3E-18 4.6E-23 133.8 10.2 93 1-117 12-115 (419)
17 1l3w_A EP-cadherin, C-cadherin 99.8 3.7E-19 1.3E-23 140.9 7.1 92 2-118 135-232 (546)
18 2ee0_A Protocadherin-9; Ca dom 99.8 3.7E-19 1.3E-23 115.2 5.3 78 2-107 35-114 (114)
19 3mvs_A Cadherin-23, otocadheri 99.8 2.2E-18 7.4E-23 121.8 9.6 80 2-110 130-210 (210)
20 3q2v_A Cadherin-1; cell adhesi 99.8 5.5E-19 1.9E-23 140.1 6.7 92 2-118 129-226 (550)
21 3ubf_A Neural-cadherin; cell a 99.8 2.3E-18 8E-23 128.2 9.5 95 1-117 7-110 (316)
22 1zvn_A Mn-cadherin; strand dim 99.8 3.1E-18 1.1E-22 108.5 8.6 75 2-105 24-99 (99)
23 1zxk_A Cadherin-8; strand dime 99.8 3.8E-18 1.3E-22 107.9 8.2 75 2-105 23-98 (98)
24 1l3w_A EP-cadherin, C-cadherin 99.8 1.6E-18 5.4E-23 137.4 7.8 89 2-115 359-448 (546)
25 3q2w_A Cadherin-2; cell adhesi 99.7 5.4E-18 1.8E-22 134.6 10.4 91 2-118 20-113 (559)
26 2x2u_A Proto-oncogene tyrosine 99.7 9.7E-20 3.3E-24 131.8 0.3 91 1-118 23-144 (246)
27 1q55_A EP-cadherin, C-cadherin 99.7 1.4E-18 4.9E-23 144.1 7.2 93 1-118 283-381 (880)
28 3mvs_A Cadherin-23, otocadheri 99.7 3.9E-18 1.3E-22 120.5 7.6 84 2-118 31-114 (210)
29 2omz_B Epithelial-cadherin; le 99.7 8.7E-18 3E-22 107.4 8.0 76 2-106 27-105 (105)
30 3ubf_A Neural-cadherin; cell a 99.7 6.8E-18 2.3E-22 125.6 8.6 87 2-118 129-219 (316)
31 2a62_A Cadherin-8; extracellul 99.7 3.3E-18 1.1E-22 128.0 6.4 86 5-118 25-111 (322)
32 3ubh_A Neural-cadherin; cell a 99.7 3.1E-17 1E-21 126.2 10.8 90 2-118 240-329 (419)
33 1q55_A EP-cadherin, C-cadherin 99.7 7.6E-18 2.6E-22 139.7 7.8 89 2-115 508-597 (880)
34 3k6i_A T-cadherin; cell adhesi 99.7 2.9E-17 9.8E-22 103.9 8.6 74 2-105 23-99 (99)
35 3k6f_A T-cadherin; cell adhesi 99.7 2.1E-17 7.2E-22 104.7 8.0 74 2-105 24-100 (100)
36 3k6d_A T-cadherin; cell adhesi 99.7 3.8E-17 1.3E-21 103.3 7.1 74 2-105 23-99 (99)
37 3qrb_A Cadherin-1; cell adhesi 99.6 2.1E-15 7.3E-20 106.5 8.2 80 1-105 128-213 (213)
38 3lnd_A CDH6 protein, cadherin 99.6 3.5E-15 1.2E-19 105.1 8.1 75 2-105 127-207 (207)
39 3ppe_A Vascular endothelial ca 99.6 9E-15 3.1E-19 102.8 10.0 74 2-105 125-203 (203)
40 3k5r_A Cadherin 13; mouse, str 99.6 2.6E-15 8.8E-20 106.4 6.7 78 2-105 129-218 (218)
41 2qvi_A Cadherin-2; beta barrel 99.6 1.8E-15 6.1E-20 107.3 5.6 78 2-105 129-215 (215)
42 4apx_B Protocadherin-15, otoca 99.5 3.8E-14 1.3E-18 102.3 7.0 78 3-106 154-238 (242)
43 4apx_B Protocadherin-15, otoca 99.5 1.6E-13 5.4E-18 99.1 9.8 89 7-118 44-132 (242)
44 1wuz_A Pcdha4 protein, CNR-EC1 99.3 1.3E-13 4.3E-18 87.6 0.2 79 5-109 23-103 (103)
45 2yrl_A KIAA1837 protein; PKD d 85.0 2.8 9.5E-05 25.5 5.6 30 77-108 69-98 (102)
46 2yhg_A SDE_182CT, cellulose-bi 84.9 11 0.00039 29.0 10.1 27 77-103 410-436 (437)
47 3ott_A Two-component system se 60.7 31 0.0011 27.4 7.2 34 77-115 720-753 (758)
48 2y72_A Collagenase, collagenas 60.0 22 0.00076 20.4 5.4 27 76-104 58-84 (85)
49 2kpn_A Bacillolysin; solution 56.5 31 0.0011 21.0 6.1 39 68-111 53-91 (103)
50 1u2c_A Dystroglycan; IG-like d 44.8 81 0.0028 22.4 8.8 65 17-108 33-104 (246)
51 3pe9_A Fibronectin(III)-like m 44.6 48 0.0016 19.9 4.7 27 77-104 61-87 (98)
52 3gin_A Sodium/calcium exchange 33.9 58 0.002 21.3 4.1 17 97-114 141-157 (160)
53 4a2l_A BT_4663, two-component 33.5 1.8E+02 0.0062 23.1 9.4 33 77-114 754-786 (795)
54 3rb5_A Na/Ca exchange protein; 31.9 64 0.0022 23.3 4.4 49 64-114 78-126 (298)
55 2e7m_A Protein KIAA0319; PKD d 31.3 76 0.0026 19.8 4.1 27 76-105 79-105 (113)
56 1row_A SSP-19, MSP-domain prot 30.9 60 0.0021 19.8 3.6 29 15-45 29-57 (109)
57 3ead_A Na/Ca exchange protein; 29.4 60 0.0021 20.3 3.5 51 64-117 73-126 (137)
58 3pdd_A Glycoside hydrolase, fa 28.6 87 0.003 20.7 4.4 33 77-112 61-93 (190)
59 1m1s_A WR4; structural genomic 27.4 76 0.0026 19.7 3.6 27 15-43 37-63 (116)
60 2lv4_A Putative outer membrane 24.1 32 0.0011 22.1 1.4 30 81-110 50-79 (146)
61 1msp_A MSP, major sperm protei 24.1 92 0.0032 19.3 3.6 26 15-42 39-64 (126)
62 3if8_A Hzwilch, protein zwilch 23.7 29 0.001 25.4 1.3 26 89-114 244-269 (339)
63 3b83_A Ten-D3; beta sheet, com 21.0 1.2E+02 0.0042 17.0 3.6 16 77-92 66-81 (100)
64 1z9l_A Vesicle-associated memb 20.2 94 0.0032 19.1 3.1 26 15-42 41-66 (128)
No 1
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=6.6e-24 Score=139.41 Aligned_cols=88 Identities=28% Similarity=0.417 Sum_probs=76.9
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCC---CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAP---GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~---~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|. +|+|.| .|+.|+|+|...+ +...+|.||+.||.|++.+. |||| .+..
T Consensus 33 ~v~-~D~D~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~ 85 (123)
T 2yqg_A 33 KIH-SDLAEE-RGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSI----------------------LDRE---ETPF 85 (123)
T ss_dssp CCC-CHHHHH-HTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSC----------------------CBTT---TBSE
T ss_pred EEE-ECCCCC-CCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcc----------------------cCcc---cCce
Confidence 345 588988 6899999999753 22468999999999999999 7887 6679
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCC
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRV 116 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~ 116 (118)
|.|.|.|+|.|.|++++++.|.|+|.|+|||+|+|.++
T Consensus 86 y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 86 FLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred EEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 99999999999999999999999999999999999874
No 2
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=2.4e-23 Score=135.66 Aligned_cols=84 Identities=32% Similarity=0.534 Sum_probs=75.1
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCC-CccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGE-RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIY 80 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~-~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~ 80 (118)
+|.|+|+|.| .|++|+|+|...... ..+|.||+.||.|++.+. |||| ....|.
T Consensus 35 ~v~A~D~D~g-~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~----------------------LD~E---~~~~y~ 88 (119)
T 2yst_A 35 QLRAADLDVG-VNGQIEYVFGAATESVRRLLRLDETSGWLSVLHR----------------------IDRE---EVNQLR 88 (119)
T ss_dssp ECCCCCSSSS-CCSCCCCEECSCCTTHHHHEEECTTTCEEEECSC----------------------CCTT---TCSEEE
T ss_pred EEEEEeCCCC-CCCeEEEEEecCCCccccEEEEeCCceEEEECcc----------------------CCcc---cCCEEE
Confidence 6789999999 799999999854321 358999999999999998 7887 567999
Q ss_pred EEEEEEECCCCCCeeEEEEEEEEEeCCCCCC
Q psy9968 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEP 111 (118)
Q Consensus 81 l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P 111 (118)
|.|.|+|.|.|+++++++|.|+|.|+|||+|
T Consensus 89 l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 89 FTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999999999999999999998
No 3
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.88 E-value=7.1e-23 Score=132.05 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=65.9
Q ss_pred EEEEeCCCCCCCCcEEEEEEeCC---CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceE
Q psy9968 3 VHATDVDPPSNGGTIQYRIIKAP---GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEI 79 (118)
Q Consensus 3 v~A~D~D~~~~n~~i~y~i~~~~---~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~ 79 (118)
|.+.|.|.+ .|+.|+|+|...+ +...+|.||+.||.|++.++ |||| ....|
T Consensus 23 v~~vd~D~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y 76 (110)
T 1ncg_A 23 LVRIRSGRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP----------------------LDRE---LIARF 76 (110)
T ss_dssp EEECCCGGG-GGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCCEE
T ss_pred EEEEeCCCC-CCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCc----------------------CCcc---cCCeE
Confidence 445588888 6899999999632 23468999999999999999 7887 66799
Q ss_pred EEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCee
Q psy9968 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMF 113 (118)
Q Consensus 80 ~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F 113 (118)
.|.|.|+|.|.|++++++.|.|+|.|+|||+|+|
T Consensus 77 ~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 77 HLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999999999999999999999999998
No 4
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.86 E-value=3.9e-21 Score=136.62 Aligned_cols=91 Identities=21% Similarity=0.285 Sum_probs=80.1
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCC---CCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPG---ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|.|.|.|.+ .|+.|+|+|...+. ...+|.|++.||.|++.+. |||| ....
T Consensus 20 ~v~~~~~D~~-~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~ 73 (215)
T 2qvi_A 20 ELVRIRSDRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP----------------------LDRE---LIAR 73 (215)
T ss_dssp EEEECCCGGG-GTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSC----------------------CCTT---TCSE
T ss_pred EEEEEeCCCC-CCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcc----------------------cCcc---cCCe
Confidence 5778899988 68999999996432 2368999999999999998 7887 5679
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
|.|.|.|+|.|.|++++++.|.|+|.|+|||+|+|.+..|
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 113 (215)
T 2qvi_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVW 113 (215)
T ss_dssp EEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEE
T ss_pred EEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCcee
Confidence 9999999999999999999999999999999999998765
No 5
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.84 E-value=8.1e-22 Score=142.71 Aligned_cols=85 Identities=19% Similarity=0.227 Sum_probs=74.1
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|.|+|+|.| .|++|+|+|.... ..+|.|++.||.|++.+. |||| .+..|.|
T Consensus 160 ~v~A~D~D~g-~n~~i~Y~i~~~~--~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l 211 (246)
T 2x2u_A 160 FRLLPVQFLC-PQISVAYRLLEGE--GLPFRSAPDSLEVSTRWA----------------------LDRE---QREKYEL 211 (246)
T ss_dssp CSCHHHHHHC-TTSCEEEEEESCT--TSSEECCTTCCEEEESSC----------------------BCTT---TCSEEEE
T ss_pred EEEEEcCCCC-CCcEEEEEEccCC--CCCEEEECCcCEEEeCCc----------------------cCcc---ccceEEE
Confidence 4679999999 7999999999543 358999999999999999 6887 6679999
Q ss_pred EEEEEE-CCCCCCeeEEEEEEEEEeCCCCCCeeC
Q psy9968 82 TVIAED-NGTPQLSDACTMKITVEDINDNEPMFD 114 (118)
Q Consensus 82 ~v~a~D-~g~p~~s~~~~v~I~v~DvNDn~P~F~ 114 (118)
.|.|+| .|+|+++++++|.|+|.|+|||+|+|.
T Consensus 212 ~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 212 VAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 999998 567999999999999999999999996
No 6
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.83 E-value=2.1e-20 Score=132.96 Aligned_cols=87 Identities=29% Similarity=0.446 Sum_probs=75.7
Q ss_pred EEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEE
Q psy9968 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITV 83 (118)
Q Consensus 4 ~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v 83 (118)
.|+|+|.| |+.|+|+|...+. ..+|.||+.+|.|++.+. |||| ....|.|.|
T Consensus 25 va~D~D~g--n~~i~Y~l~~~~~-~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l~v 76 (215)
T 2a4e_A 25 LHSDIDSG--DGNIKYILSGEGA-GTIFVIDDKSGNIHATKT----------------------LDRE---ERAQYTLMA 76 (215)
T ss_dssp CCCTTCCS--SSCEEEEEEETTB-TTTEEECTTTCEEEECSC----------------------CCTT---TCSEEEEEE
T ss_pred EEECCCCC--CCeEEEEEECCCC-CCeEEEECCceEEEECCc----------------------cCCc---cCCEEEEEE
Confidence 37899988 5889999986432 358999999999999998 7887 667999999
Q ss_pred EEEECCC-CCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 84 IAEDNGT-PQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 84 ~a~D~g~-p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|+|.|. +++++++.|.|+|.|+|||+|+|.+..|
T Consensus 77 ~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 112 (215)
T 2a4e_A 77 QAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIY 112 (215)
T ss_dssp EEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSE
T ss_pred EEEECCCCCcccccEEEEEEEeeCCCCCCCccCCce
Confidence 9999985 6789999999999999999999998765
No 7
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.81 E-value=1.5e-19 Score=143.51 Aligned_cols=92 Identities=32% Similarity=0.454 Sum_probs=79.4
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCC-CCcceEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP-EREKEIY 80 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~-~~~~~~~ 80 (118)
+|+|+|+|.| .|++|+|+|..... .+|.||+.+|.|++.+. ||||.. .+...|.
T Consensus 359 ~v~A~D~D~g-~n~~i~Ysi~~~~~--~~f~Id~~tG~i~~~~~----------------------lDrE~~~~~~~~y~ 413 (559)
T 3q2w_A 359 TLTAQDPDRY-MQQNIRYTKLSDPA--NWLKIDPVNGQITTIAV----------------------LDRESPNVKNNIYN 413 (559)
T ss_dssp ECCEECSCSS-SCCCEEEEEEECTT--CCEEECTTTCEEEESSC----------------------CCSSSTTSCSSEEE
T ss_pred EEEEECCCCC-CCCceEEEEccCCc--cceEecCCceEEEEccc----------------------cCcccccccCCEEE
Confidence 6789999999 78999999986543 58999999999999999 566521 1337899
Q ss_pred EEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 81 l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
|+|.|+|.|.|+++++++|.|+|.|+|||+|+|.+..|
T Consensus 414 l~V~A~D~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~ 451 (559)
T 3q2w_A 414 ATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEA 451 (559)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEECCSCCCCEESCTTC
T ss_pred EEEEEEcCCCCcceEEEEEEEEEEEccCCCCcccCCce
Confidence 99999999999999999999999999999999986543
No 8
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.81 E-value=1.1e-19 Score=129.27 Aligned_cols=82 Identities=30% Similarity=0.491 Sum_probs=66.5
Q ss_pred EEEEEeCCC---CCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCCcc
Q psy9968 2 QVHATDVDP---PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77 (118)
Q Consensus 2 ~v~A~D~D~---~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~ 77 (118)
+|+|+|+|. | .|++|+|+|..+. .+|.|++.||.|++. +. |||| .+.
T Consensus 128 ~v~A~D~D~~~~G-~n~~i~Y~i~~~~---~~F~Id~~tG~I~~~~~~----------------------LD~E---~~~ 178 (215)
T 2a4e_A 128 QVTASDADDPTYG-NSAKLVYSILEGQ---PYFSVEAQTGIIRTALPN----------------------MDRE---AKE 178 (215)
T ss_dssp ECCEECSSCTTTC-SSSCCEEEEEEST---TTEEECTTTCEEEECSSC----------------------CCSS---SCS
T ss_pred EEEEEECCCCCCC-CceEEEEEEeCCC---CcEEEeCCccEEEEcccC----------------------CCcc---cCC
Confidence 688999997 6 6899999999643 389999999999998 77 7887 667
Q ss_pred eEEEEEEEEECCCC--CCeeEEEEEEEEEeCCCCCCe
Q psy9968 78 EIYITVIAEDNGTP--QLSDACTMKITVEDINDNEPM 112 (118)
Q Consensus 78 ~~~l~v~a~D~g~p--~~s~~~~v~I~v~DvNDn~P~ 112 (118)
.|.|.|.|+|.|.| +++++++|.|+|.|+|||+|+
T Consensus 179 ~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 179 EYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 99999999999986 689999999999999999995
No 9
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.81 E-value=1.5e-19 Score=127.90 Aligned_cols=85 Identities=26% Similarity=0.355 Sum_probs=72.9
Q ss_pred CCCCCCCCcEEEEEEeCCC---CCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEEE
Q psy9968 8 VDPPSNGGTIQYRIIKAPG---ERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84 (118)
Q Consensus 8 ~D~~~~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v~ 84 (118)
+|.+ .|++++|+|...+. ...+|.|++.||.|++.++ |||| ....|.|.|.
T Consensus 26 aD~d-~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l~v~ 79 (213)
T 3qrb_A 26 SNRD-KETKVFYSITGQGADKPPVGVFIIERETGWLKVTQP----------------------LDRE---AIAKYILYSH 79 (213)
T ss_dssp CGGG-GTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCSEEEEEEE
T ss_pred ECCC-CCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCc----------------------cCcc---cCceEEEEEE
Confidence 3444 47899999996332 2358999999999999999 7887 6679999999
Q ss_pred EEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 85 AEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 85 a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
|+|.|+|++++++.|.|+|.|+|||+|+|.+..|
T Consensus 80 a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 113 (213)
T 3qrb_A 80 AVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVF 113 (213)
T ss_dssp EEETTSCBCSCCEEEEEEEECCSCCCCEESCSEE
T ss_pred EEeCCCCcccceEEEEEEEEEccCCCCccCCCce
Confidence 9999999999999999999999999999998765
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.80 E-value=6.4e-20 Score=137.28 Aligned_cols=88 Identities=38% Similarity=0.603 Sum_probs=77.4
Q ss_pred EEEEEeCCC---CCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCCcc
Q psy9968 2 QVHATDVDP---PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77 (118)
Q Consensus 2 ~v~A~D~D~---~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~ 77 (118)
+|.|+|+|. | .|++++|+|..+. .+|.|++.+|.|++. +. |||| ...
T Consensus 127 ~v~A~D~D~~~~G-~n~~i~Y~i~~~~---~~F~Id~~tG~i~~~~~~----------------------LD~E---~~~ 177 (322)
T 2a62_A 127 NVTATDADDPVYG-NSAKLVYSILEGQ---PYFSIEPETAIIKTALPN----------------------MDRE---AKE 177 (322)
T ss_dssp CCCCCBCSCSSST-TSSCEEEEEEECT---TTEEECTTTCCEEECSSC----------------------CCGG---GCS
T ss_pred EEEEEeCCCCCCC-ccEEEEEEEccCC---CCEEEecCCCEEEecccC----------------------CCcc---cCC
Confidence 578999996 6 6899999998543 489999999999998 67 7887 667
Q ss_pred eEEEEEEEEECCCCC--CeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 78 EIYITVIAEDNGTPQ--LSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 78 ~~~l~v~a~D~g~p~--~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|.|.|+|.|.|+ ++++++|.|+|.|+|||+|+|.+..|
T Consensus 178 ~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y 220 (322)
T 2a62_A 178 EYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLY 220 (322)
T ss_dssp EEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEE
T ss_pred eEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCc
Confidence 999999999999874 89999999999999999999998765
No 11
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.80 E-value=5.5e-21 Score=134.92 Aligned_cols=87 Identities=25% Similarity=0.412 Sum_probs=71.5
Q ss_pred EEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEE
Q psy9968 4 HATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITV 83 (118)
Q Consensus 4 ~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v 83 (118)
.|+|+|.| ++.++|+|...+ ...+|.|++.+|.|++.+. |||| ....|.|.|
T Consensus 24 ~a~D~D~g--~~~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l~v 75 (207)
T 3lnd_A 24 LHSDQDRG--DGSLKYILSGDG-AGDLFIINENTGDIQATKR----------------------LDRE---EKPVYILRA 75 (207)
T ss_dssp CCCTTCCS--STTBCCCCCSSS-BTTTEEECTTTCEEEECSC----------------------CCGG---GCCEEEC--
T ss_pred EEeCCCCC--CceEEEEEECCC-CCCeEEEECCceEEEECCC----------------------cCcc---cCCEEEEEE
Confidence 38999998 478999998533 2358999999999999999 7887 667999999
Q ss_pred EEEECC-CCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 84 IAEDNG-TPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 84 ~a~D~g-~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|+|.| .+++++++.|.|+|.|+|||+|+|.+..|
T Consensus 76 ~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 111 (207)
T 3lnd_A 76 QAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVY 111 (207)
T ss_dssp --CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEE
T ss_pred EEEECCCCCccccEEEEEEEECccCCCCCccCCCce
Confidence 999998 57889999999999999999999998765
No 12
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.80 E-value=1.3e-19 Score=128.68 Aligned_cols=86 Identities=26% Similarity=0.398 Sum_probs=72.7
Q ss_pred EEEEeCCCCCCCCcEEEEEEeCC---CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceE
Q psy9968 3 VHATDVDPPSNGGTIQYRIIKAP---GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEI 79 (118)
Q Consensus 3 v~A~D~D~~~~n~~i~y~i~~~~---~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~ 79 (118)
+.|+|+|. .++|+|...+ +...+|.|++.||.|++.+. |||| ....|
T Consensus 25 v~a~D~d~-----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y 74 (218)
T 3k5r_A 25 VVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRT----------------------LDRE---TIATY 74 (218)
T ss_dssp CBCTTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCSEE
T ss_pred EEecCCCc-----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCc----------------------CCcc---cCCEE
Confidence 44555543 6899998532 22468999999999999999 7887 66789
Q ss_pred EEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 80 ~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|.|+|.|.|++++++.|.|+|.|+|||+|+|.+..|
T Consensus 75 ~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 113 (218)
T 3k5r_A 75 QLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPY 113 (218)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSE
T ss_pred EEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCce
Confidence 999999999999999999999999999999999998765
No 13
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.80 E-value=3.7e-19 Score=141.01 Aligned_cols=91 Identities=27% Similarity=0.419 Sum_probs=78.2
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCC--CCcceE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP--EREKEI 79 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~--~~~~~~ 79 (118)
+|+|+|+|.| .|++|+|+|..... .+|.|++.+|.|++.+. ||||.. .....|
T Consensus 353 ~v~A~D~D~g-~n~~i~y~i~~~~~--~~f~id~~tG~i~~~~~----------------------lDrE~~~~~~~~~y 407 (550)
T 3q2v_A 353 SYTAREPDTF-MDQKITYRIWRDTA--NWLEINPETGAIFTRAE----------------------MDREDAEHVKNSTY 407 (550)
T ss_dssp ECCEECCCCS-TTCCCEEEEEECTT--CCEEECTTTCEEEECSC----------------------CCTTCTTTCCSSEE
T ss_pred EEeCCCCCCC-CCCCEEEEEecCCC--CcEEEeCCCcEEEECCc----------------------cCcccccccCCCEE
Confidence 5789999999 78999999986543 48999999999999999 566521 012689
Q ss_pred EEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCC
Q psy9968 80 YITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQ 117 (118)
Q Consensus 80 ~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~ 117 (118)
.|+|.|+|.|.|+++++++|.|+|.|+|||+|+|.+..
T Consensus 408 ~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P~~~~~~ 445 (550)
T 3q2v_A 408 VALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPEPRN 445 (550)
T ss_dssp EEEEEEECCSSSCCCEEEEEEEEEECCCCCCCEESCSS
T ss_pred EEEEEEEeCCCCcceeEEEEEEEEEeCCCCCCcCcCcc
Confidence 99999999999999999999999999999999998643
No 14
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.80 E-value=2.2e-19 Score=126.51 Aligned_cols=83 Identities=27% Similarity=0.386 Sum_probs=72.2
Q ss_pred EeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEEEE
Q psy9968 6 TDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIA 85 (118)
Q Consensus 6 ~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v~a 85 (118)
+|+|.| .+ +|+|..+.. ..+|.|++.||.|++.+. |||| ....|.|.|.|
T Consensus 26 ~D~D~g-~~---~Y~i~~~~~-~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l~v~a 75 (203)
T 3ppe_A 26 SSVGNK-NA---MYIIEGESA-NTIFKVQGYDGDIYAFER----------------------LDRE---KKAEYELTAHI 75 (203)
T ss_dssp BCCCCT-TE---EEEEEETTB-TTTEEEETTTTEEEESSC----------------------CCTT---TCCEEEEEEEE
T ss_pred ecCCCC-Cc---EEEEecCCC-CCeEEEECCcCEEEECcc----------------------cccc---ccceEEEEEEE
Confidence 788887 34 999995433 358999999999999998 7887 66789999999
Q ss_pred EECCCC-CCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 86 EDNGTP-QLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 86 ~D~g~p-~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|.| ++++++.|.|+|.|+|||+|+|.+..|
T Consensus 76 ~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 109 (203)
T 3ppe_A 76 IDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIF 109 (203)
T ss_dssp EETTTTEECSCCEEEEEEEECCCCCCCEESCSEE
T ss_pred EECCCCCcccceEEEEEEEcCCCCCCCCccCCcc
Confidence 999987 688999999999999999999998765
No 15
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=1.8e-20 Score=123.39 Aligned_cols=88 Identities=16% Similarity=0.254 Sum_probs=67.5
Q ss_pred EEEEEeCCCCCCCCcE---EEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCC-Ccc
Q psy9968 2 QVHATDVDPPSNGGTI---QYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE-REK 77 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i---~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~-~~~ 77 (118)
+| |+|+|.+ . +.+ +|+|..+ +...+|.||+.||.|++.++ ||||..+ ...
T Consensus 29 ~v-a~D~d~~-~-~~i~~~~Y~i~~~-~~~~~F~Id~~tG~i~~~~~----------------------LDRE~~c~~~~ 82 (125)
T 1wyj_A 29 NL-AKDLGLS-L-RELITRGAQILSK-GNKQLLQLEQKSGNLLLKEK----------------------LDREELCGSTN 82 (125)
T ss_dssp ES-TTTTTCC-H-HHHHHTTCEEECS-SSSCSEEECSSSSEEEESSC----------------------CCSTTTCTTCS
T ss_pred EE-EecCCCC-C-CceeeEEEEEecC-CCCCeEEEECCccEEEECcc----------------------ccchhhcccCC
Confidence 34 7788766 2 345 8999853 33469999999999999999 5776210 116
Q ss_pred eEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 78 EIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 78 ~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|.++|.+. . ++ +.+.|.|+|.|+|||+|+|.++.|
T Consensus 83 ~y~l~v~a~~~-~-p~-~~~~V~I~V~DvNDN~P~F~~~~y 120 (125)
T 1wyj_A 83 PCILHFQVLLK-S-PV-QFIQGEIQLQDVNDHAPEFMEDES 120 (125)
T ss_dssp SCCBCCEEEET-T-TT-EEECCCEEECCCCCCCCCCCCCCC
T ss_pred cEEEEEEEEEC-C-CC-eEEEEEEEEEEccCCCCcCCCcEE
Confidence 78999999973 2 33 588999999999999999999887
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.77 E-value=1.3e-18 Score=133.82 Aligned_cols=93 Identities=25% Similarity=0.389 Sum_probs=75.6
Q ss_pred CEEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeC--------CCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCC
Q psy9968 1 MQVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDK--------ETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72 (118)
Q Consensus 1 ~~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~--------~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~ 72 (118)
++|+|+|+|.| .|+.+.|+|..... ...|.|++ .+|.|++.+.||||. ++++
T Consensus 12 ~~v~AtD~D~g-~n~~v~Ysi~~~~~-~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~-----------------~~~~- 71 (419)
T 3ubh_A 12 KRIEFTEADGD-TEGKSVFQLEKETD-KETFKIRDDNPWVTVETNGAVRVKKKWDYEE-----------------LGPE- 71 (419)
T ss_dssp EEEEEEGGGGC-STTCEEEECCCSST-TCEEEESSCCSSEEECTTSEEEESSCCCGGG-----------------SCTT-
T ss_pred EEEEEEcccCC-CCceEEEEEecCCC-CceEEEcCCCccEEECCCcEEEECCccCccc-----------------cCcc-
Confidence 47999999999 79999999985433 36899987 899999999965554 3332
Q ss_pred CCCcceEEEEEEEEECCCC---CCeeEEEEEEEEEeCCCCCCeeCCCC
Q psy9968 73 PEREKEIYITVIAEDNGTP---QLSDACTMKITVEDINDNEPMFDRVQ 117 (118)
Q Consensus 73 ~~~~~~~~l~v~a~D~g~p---~~s~~~~v~I~v~DvNDn~P~F~~~~ 117 (118)
..|.+.|.|+|.|.| ++++++.|.|+|.|+|||+|+|.+..
T Consensus 72 ----~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 115 (419)
T 3ubh_A 72 ----KTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRP 115 (419)
T ss_dssp ----CEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSS
T ss_pred ----ceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCC
Confidence 589999999998865 67888999999999999999999765
No 17
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.77 E-value=3.7e-19 Score=140.94 Aligned_cols=92 Identities=36% Similarity=0.497 Sum_probs=80.0
Q ss_pred EEEEEeCCCCC--CCCcEEEEEEeCCC---CCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCC
Q psy9968 2 QVHATDVDPPS--NGGTIQYRIIKAPG---ERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPER 75 (118)
Q Consensus 2 ~v~A~D~D~~~--~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~ 75 (118)
+|+|+|+|.|. .|+.++|+|....+ ...+|.|++.||.|++. +. |||| .
T Consensus 135 ~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~----------------------LD~E---~ 189 (546)
T 1l3w_A 135 AVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTG----------------------LDRE---K 189 (546)
T ss_dssp ECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCC----------------------CCTT---T
T ss_pred EEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccC----------------------CCcc---c
Confidence 67899999882 47999999986442 24689999999999986 56 7887 6
Q ss_pred cceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 76 ~~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
...|.|.|.|+|.|+|+++++++|.|+|.|+|||+|+|.+..|
T Consensus 190 ~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y 232 (546)
T 1l3w_A 190 FPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTY 232 (546)
T ss_dssp CCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEE
T ss_pred CceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccc
Confidence 6799999999999999999999999999999999999998755
No 18
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.7e-19 Score=115.15 Aligned_cols=78 Identities=29% Similarity=0.462 Sum_probs=67.7
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCC--CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAP--GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEI 79 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~--~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~ 79 (118)
+|+|+|+|.| .|++|+|+|.... ....+|.||+.||.|++.+. |||| ....|
T Consensus 35 ~v~A~D~D~g-~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~----------------------LD~E---~~~~y 88 (114)
T 2ee0_A 35 QLHATDADIG-SNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRS----------------------LDRE---ETAIH 88 (114)
T ss_dssp ECCCCSCSSC-CCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSC----------------------CCTT---TCSEE
T ss_pred EEEEEeCCCC-CCcEEEEEEccCCCCCccceEEEeCCeeEEEECcc----------------------CCcc---cCcEE
Confidence 6789999999 7999999998522 22468999999999999998 7887 56799
Q ss_pred EEEEEEEECCCCCCeeEEEEEEEEEeCC
Q psy9968 80 YITVIAEDNGTPQLSDACTMKITVEDIN 107 (118)
Q Consensus 80 ~l~v~a~D~g~p~~s~~~~v~I~v~DvN 107 (118)
.|.|.|+|.|.|+ ++++|.|+|.|+|
T Consensus 89 ~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 89 KVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp EEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred EEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 9999999999876 7899999999998
No 19
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.77 E-value=2.2e-18 Score=121.83 Aligned_cols=80 Identities=33% Similarity=0.470 Sum_probs=71.4
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|.|+|+|.| .|+.++|+|... . .+|.|++.+|.|++.+. |||| ....|.|
T Consensus 130 ~v~A~D~D~g-~n~~v~Y~i~~~-~--~~F~Id~~tG~i~~~~~----------------------LD~E---~~~~y~l 180 (210)
T 3mvs_A 130 IVNATDPDLG-AGGSVLYSFQPP-S--PFFAIDSARGIVTVIQE----------------------LDYE---VTQAYQL 180 (210)
T ss_dssp ECCEECCSSG-GGGCEEEEESSC-C--SSEEECTTTCEEEECSC----------------------CCTT---TCSEEEE
T ss_pred EEEEEeCCCC-CCceEEEEEeCC-C--CCEEEeCCcEEEEECCc----------------------CCCc---ccceEEE
Confidence 6789999999 689999999743 2 48999999999999999 6887 5679999
Q ss_pred EEEEEECC-CCCCeeEEEEEEEEEeCCCCC
Q psy9968 82 TVIAEDNG-TPQLSDACTMKITVEDINDNE 110 (118)
Q Consensus 82 ~v~a~D~g-~p~~s~~~~v~I~v~DvNDn~ 110 (118)
.|.|+|.| .|+++++++|.|+|.|+|||+
T Consensus 181 ~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 181 TVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred EEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 99999998 478999999999999999986
No 20
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.76 E-value=5.5e-19 Score=140.05 Aligned_cols=92 Identities=34% Similarity=0.536 Sum_probs=79.5
Q ss_pred EEEEEeCCCCC--CCCcEEEEEEeCCC---CCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCC
Q psy9968 2 QVHATDVDPPS--NGGTIQYRIIKAPG---ERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPER 75 (118)
Q Consensus 2 ~v~A~D~D~~~--~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~ 75 (118)
+|.|+|+|.|. .|+.++|+|..+.+ ...+|.|++.+|.|++. +. |||| .
T Consensus 129 ~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~----------------------LDrE---~ 183 (550)
T 3q2v_A 129 KVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSG----------------------LDRE---S 183 (550)
T ss_dssp ECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSC----------------------CCTT---T
T ss_pred EEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCC----------------------CCcc---c
Confidence 67899999882 47899999986322 24589999999999885 56 7888 6
Q ss_pred cceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 76 EKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 76 ~~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
+..|.|.|+|+|.|+|+++++++|.|+|.|+|||+|+|.+..|
T Consensus 184 ~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y 226 (550)
T 3q2v_A 184 YPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTY 226 (550)
T ss_dssp CSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEE
T ss_pred CcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEeccee
Confidence 7799999999999999999999999999999999999998765
No 21
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.76 E-value=2.3e-18 Score=128.15 Aligned_cols=95 Identities=17% Similarity=0.345 Sum_probs=73.8
Q ss_pred CEEEEEeCCCCCCCCcEEEEEEeCCCC--------CccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCC
Q psy9968 1 MQVHATDVDPPSNGGTIQYRIIKAPGE--------RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDD 72 (118)
Q Consensus 1 ~~v~A~D~D~~~~n~~i~y~i~~~~~~--------~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~ 72 (118)
.+++|+|+|.+ .||.+.|+|....+. ..+|.|++ +|.|++.+.||||. ++++
T Consensus 7 ~~~~atd~D~g-~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~-----------------~~~~- 66 (316)
T 3ubf_A 7 KRIEFTEADGD-TEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEE-----------------LGPE- 66 (316)
T ss_dssp EEEEEESGGGC-STTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGG-----------------SCTT-
T ss_pred EEEEEEecCCC-CCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhh-----------------cccc-
Confidence 36899999999 799999999753321 24788988 99999999977775 5554
Q ss_pred CCCcceEEEEEEEEECCCC-CCeeEEEEEEEEEeCCCCCCeeCCCC
Q psy9968 73 PEREKEIYITVIAEDNGTP-QLSDACTMKITVEDINDNEPMFDRVQ 117 (118)
Q Consensus 73 ~~~~~~~~l~v~a~D~g~p-~~s~~~~v~I~v~DvNDn~P~F~~~~ 117 (118)
....|.+.+.|.|++.| +++++++|.|+|.|+|||+|+|.+..
T Consensus 67 --~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 110 (316)
T 3ubf_A 67 --KTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRP 110 (316)
T ss_dssp --CEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSS
T ss_pred --cceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCC
Confidence 45688999999999876 68999999999999999999999765
No 22
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.76 E-value=3.1e-18 Score=108.54 Aligned_cols=75 Identities=24% Similarity=0.424 Sum_probs=66.1
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|+ +|+|.| |++|+|+|..... ..+|.||+.||.|++.++ |||| .+..|.|
T Consensus 24 ~v~-~D~D~g--Ng~v~Ysi~~~~~-~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l 74 (99)
T 1zvn_A 24 KLH-SDMDRG--DGSIKYILSGEGA-GIVFTIDDTTGDIHAIQR----------------------LDRE---ERSQYTL 74 (99)
T ss_dssp ECC-BTTCCS--SSCEEEEEEETTB-TTTEEECTTTCEEEECSC----------------------CCTT---TCSEEEE
T ss_pred EEE-ECCCCC--CCEEEEEEeCCCC-CceEEEeCCCCCEEECee----------------------cCCc---cCCeEEE
Confidence 566 999998 7999999986443 258999999999999998 7888 6789999
Q ss_pred EEEEEECC-CCCCeeEEEEEEEEEe
Q psy9968 82 TVIAEDNG-TPQLSDACTMKITVED 105 (118)
Q Consensus 82 ~v~a~D~g-~p~~s~~~~v~I~v~D 105 (118)
.|.|+|.| +|++++++.|.|+|.|
T Consensus 75 ~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 75 RAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred EEEEEECCCCCCcceeEEEEEEEeC
Confidence 99999999 5999999999999987
No 23
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.75 E-value=3.8e-18 Score=107.92 Aligned_cols=75 Identities=31% Similarity=0.438 Sum_probs=63.7
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|. +|+|.| |++|+|+|...+. ..+|.||+.||.|++.++ |||| .++.|.|
T Consensus 23 ~v~-~D~D~g--N~~v~Ysi~~~~~-~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l 73 (98)
T 1zxk_A 23 RLH-TDLDPG--SKKIKYILSGDGA-GTIFQINDITGDIHAIKR----------------------LDRE---EKAEYTL 73 (98)
T ss_dssp ECC-BCCCCC----CEEEEEEETTB-TTTEEECTTTCEEEECSC----------------------CCTT---TCSEEEE
T ss_pred EEE-ECCCCC--CCEEEEEEeCCCC-CCEEEEECCccEEEECcc----------------------CCCc---CCCeEEE
Confidence 454 899998 6999999986433 258999999999999999 7887 6789999
Q ss_pred EEEEEECCC-CCCeeEEEEEEEEEe
Q psy9968 82 TVIAEDNGT-PQLSDACTMKITVED 105 (118)
Q Consensus 82 ~v~a~D~g~-p~~s~~~~v~I~v~D 105 (118)
.|.|+|.|. |++++++.|.|+|.|
T Consensus 74 ~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 74 TAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEEECCCCCCcceeEEEEEEEEC
Confidence 999999997 789999999999987
No 24
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.75 E-value=1.6e-18 Score=137.37 Aligned_cols=89 Identities=25% Similarity=0.367 Sum_probs=76.6
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCC-CCcceEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP-EREKEIY 80 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~-~~~~~~~ 80 (118)
+|.|+|+|.| .|++++|+|.... ..+|.|++.+|.|++.+. ||||.. .....|.
T Consensus 359 ~v~A~D~D~g-~n~~i~ysi~~~~--~~~F~Id~~tG~i~~~~~----------------------lD~E~~~~~~~~y~ 413 (546)
T 1l3w_A 359 SLVAQDPDKQ-QIQKLSYFIGNDP--ARWLTVNKDNGIVTGNGN----------------------LDRESEYVKNNTYT 413 (546)
T ss_dssp ECCEECCCTT-CCCCEEEEECCCS--SCCCEEETTTTEEEECSC----------------------CCTTSSSCCSSCCE
T ss_pred EEEEECCCCC-CCceEEEEECCCC--CCcEEEeCCcEEEEECCc----------------------cCCccccCCCCEEE
Confidence 6789999998 6899999998543 358999999999999999 566621 0126899
Q ss_pred EEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCC
Q psy9968 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115 (118)
Q Consensus 81 l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~ 115 (118)
|.|.|+|.|.|+++++++|.|+|.|+|||+|+|.+
T Consensus 414 l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~ 448 (546)
T 1l3w_A 414 VIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSP 448 (546)
T ss_dssp EEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSC
T ss_pred EEEEEEECCCCCcEeEEEEEEEEEECCCCcCCccC
Confidence 99999999999999999999999999999999974
No 25
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.75 E-value=5.4e-18 Score=134.58 Aligned_cols=91 Identities=21% Similarity=0.296 Sum_probs=79.1
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCC---CccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGE---RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~---~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
.+.+.+.|.+ .|+.|+|+|.+.+.. ..+|.||+.||.|++.+. |||| ....
T Consensus 20 ~i~~~~~D~~-~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~----------------------LDrE---~~~~ 73 (559)
T 3q2w_A 20 ELVRIRSDRD-KNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP----------------------LDRE---LIAR 73 (559)
T ss_dssp EEEECCCGGG-GTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCSE
T ss_pred EEEEEeeCCC-CCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCc----------------------cCCC---CCce
Confidence 3567788887 689999999964432 258999999999999999 7887 6678
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
|.|.|.|.|.|++++++++.|.|+|.|+|||+|+|.+..|
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 113 (559)
T 3q2w_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVW 113 (559)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEE
T ss_pred EEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCee
Confidence 9999999999999999999999999999999999998765
No 26
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.75 E-value=9.7e-20 Score=131.78 Aligned_cols=91 Identities=19% Similarity=0.236 Sum_probs=69.8
Q ss_pred CEEEEEeCCCCC-CCCcEE------EEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCC
Q psy9968 1 MQVHATDVDPPS-NGGTIQ------YRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDP 73 (118)
Q Consensus 1 ~~v~A~D~D~~~-~n~~i~------y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~ 73 (118)
++|+|+|+|.|. .+.+|. |+|... ...+|.||+.||.|++.+. ||||
T Consensus 23 ~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~--~~~~F~Id~~tG~i~~~~~----------------------LDrE-- 76 (246)
T 2x2u_A 23 LYVHALRDAPEEVPSFRLGQHLYGTYRTRLH--ENNWIRIQEDTGLLYLQRS----------------------LDHS-- 76 (246)
T ss_dssp EECCEECSSTTCCCCCEECSEEECGGGCEEE--ECCSEEECTTTCEEEESSC----------------------BCHH--
T ss_pred EEEEEEcCCCCCcceEEEeeccccceeccCC--CCCEEEECCCcEEEEECCc----------------------CChh--
Confidence 368999999863 345555 666543 2358999999999999999 5666
Q ss_pred CCcceE------------EEEEEEEECCCC--CCeeEEEEEEEEEeCCCCCCe----------eCCCCC
Q psy9968 74 EREKEI------------YITVIAEDNGTP--QLSDACTMKITVEDINDNEPM----------FDRVQY 118 (118)
Q Consensus 74 ~~~~~~------------~l~v~a~D~g~p--~~s~~~~v~I~v~DvNDn~P~----------F~~~~Y 118 (118)
....| .|.|.|+|.|.| +++++++|.|+|.|+|||+|+ |.+..|
T Consensus 77 -~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y 144 (246)
T 2x2u_A 77 -SWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRP 144 (246)
T ss_dssp -HHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCC
T ss_pred -HhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcE
Confidence 45567 999999999987 788999999999999999999 998776
No 27
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.75 E-value=1.4e-18 Score=144.07 Aligned_cols=93 Identities=37% Similarity=0.507 Sum_probs=80.6
Q ss_pred CEEEEEeCCCCC--CCCcEEEEEEeCCC---CCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCC
Q psy9968 1 MQVHATDVDPPS--NGGTIQYRIIKAPG---ERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPE 74 (118)
Q Consensus 1 ~~v~A~D~D~~~--~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~ 74 (118)
++|+|+|+|.|. .|+.++|+|....+ ...+|.||+.||.|++. +. ||||
T Consensus 283 ~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~----------------------LDrE--- 337 (880)
T 1q55_A 283 MAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTG----------------------LDRE--- 337 (880)
T ss_dssp EECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCC----------------------CCTT---
T ss_pred EEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEeccc----------------------CCHH---
Confidence 368899999982 47999999986443 34689999999999986 56 7887
Q ss_pred CcceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 75 REKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 75 ~~~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
....|.|.|+|+|.|+|+++++++|.|+|.|+|||+|+|.+..|
T Consensus 338 ~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y 381 (880)
T 1q55_A 338 KFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTY 381 (880)
T ss_dssp TCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEE
T ss_pred HcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccce
Confidence 66799999999999999999999999999999999999998765
No 28
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.74 E-value=3.9e-18 Score=120.52 Aligned_cols=84 Identities=26% Similarity=0.427 Sum_probs=71.2
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|.|+|+|.+ .+.|+|.... ...+|.|++.+|.|++.+. |||| ....|.|
T Consensus 31 ~v~A~D~D~~----~~~y~i~~~~-~~~~F~Id~~tG~i~~~~~----------------------LD~E---~~~~y~l 80 (210)
T 3mvs_A 31 QLLARDMDND----PLVFGVSGEE-ASRFFAVEPDTGVVWLRQP----------------------LDRE---TKSEFTV 80 (210)
T ss_dssp ECCEECTTCC----CCEEEEESHH-HHHHEEECTTTCEEEESSC----------------------CCTT---TCCEEEE
T ss_pred EEEEEeCCCC----cEEEEEeCCC-CCCcEEEeCCCCEEEECCc----------------------cCCc---ccceEEE
Confidence 6789999954 4899998432 2358999999999999999 6887 6679999
Q ss_pred EEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 82 ~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|+|.+. .+++.|.|+|.|+|||+|+|.+..|
T Consensus 81 ~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y 114 (210)
T 3mvs_A 81 EFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPY 114 (210)
T ss_dssp EEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSE
T ss_pred EEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceE
Confidence 999999875 4678999999999999999998765
No 29
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.73 E-value=8.7e-18 Score=107.39 Aligned_cols=76 Identities=26% Similarity=0.361 Sum_probs=64.6
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCC---CccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGE---RAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~---~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|.| |.+ .|++|+|+|...... ..+|.||+.||.|++.++ |||| .+..
T Consensus 27 ~v~A---d~g-~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~----------------------LDrE---~~~~ 77 (105)
T 2omz_B 27 QIKS---NKD-KEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP----------------------LDRE---RIAT 77 (105)
T ss_dssp ECEE---GGG-GSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCCE
T ss_pred EEEC---CCC-CCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECcc----------------------CCcC---CCCe
Confidence 4566 446 689999999875432 358999999999999999 7887 6789
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEeC
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVEDI 106 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~Dv 106 (118)
|.|.|+|+|.|.|++++++.|.|+|.|+
T Consensus 78 y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 78 YTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 9999999999999999999999999996
No 30
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.73 E-value=6.8e-18 Score=125.63 Aligned_cols=87 Identities=22% Similarity=0.354 Sum_probs=72.5
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|.|+|+|.| .| ++|+|..+. ...+|.|++.+|.|++.+. |||| ....|.|
T Consensus 129 ~v~A~D~D~g-~n--i~Y~i~~~~-~~~~F~Id~~tG~i~~~~~----------------------lD~e---~~~~y~l 179 (316)
T 3ubf_A 129 TLQARDPDTD-HN--IHYFIVRDR-TGGRFEVDERSGVVRTRGT----------------------DLFQ---LDMEYVL 179 (316)
T ss_dssp ECCEECSSTT-CC--EEEEEEEEE-SSSCEEECTTTCEEEECSS----------------------CCCC---TTCEEEE
T ss_pred EEEEECCCCC-Cc--eEEEEEeCC-CCCEEEEECCccEEEECCc----------------------CCcc---cCcEEEE
Confidence 6789999998 45 999998532 2358999999999999999 6776 5568999
Q ss_pred EEEEEECCC----CCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 82 TVIAEDNGT----PQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 82 ~v~a~D~g~----p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|+|.|+ |++++++.+.|+|.| |||+|+|.+..|
T Consensus 180 ~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y 219 (316)
T 3ubf_A 180 YVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSY 219 (316)
T ss_dssp EEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSE
T ss_pred EEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCc
Confidence 999999985 468889999999999 999999998876
No 31
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.73 E-value=3.3e-18 Score=128.02 Aligned_cols=86 Identities=34% Similarity=0.457 Sum_probs=73.6
Q ss_pred EEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEEE
Q psy9968 5 ATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVI 84 (118)
Q Consensus 5 A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v~ 84 (118)
|+|+|.| ++.++|+|...+. ..+|.||+.+|.|++.+. |||| ....|.|.|.
T Consensus 25 a~D~D~g--~~~i~Y~l~~~~~-~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~y~l~v~ 76 (322)
T 2a62_A 25 HTDLDPG--SKKIKYILSGDGA-GTIFQINDITGDIHAIKR----------------------LDRE---EKAEYTLTAQ 76 (322)
T ss_dssp CCCCCCS--SCCCEEEEEETTB-TTTEEEETTTTEEEECSC----------------------CCTT---TCSBCCEEEE
T ss_pred EEcCCCC--CCEEEEEEECCCC-CCcEEEeCCcCEEEEecc----------------------CCcc---cccEEEEEEE
Confidence 4799987 5889999985432 358999999999999998 6887 5678999999
Q ss_pred EEECCC-CCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 85 AEDNGT-PQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 85 a~D~g~-p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
|+|.+. +++++++.+.|+|.|+|||+|+|.+..|
T Consensus 77 a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y 111 (322)
T 2a62_A 77 AVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPY 111 (322)
T ss_dssp EECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEE
T ss_pred EEECCCCCcccceEEEEEEEEecCCCCCccCCCce
Confidence 999875 5688899999999999999999998755
No 32
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.72 E-value=3.1e-17 Score=126.25 Aligned_cols=90 Identities=27% Similarity=0.427 Sum_probs=73.2
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYI 81 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l 81 (118)
+|.|+|+| |+.++|+|...++...+|.|++.+|.|++.+. ||||.......|.|
T Consensus 240 ~v~A~D~d----n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~----------------------LD~E~~~~~~~y~l 293 (419)
T 3ubh_A 240 SIKAKSFA----DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKE----------------------LDFEDLRQPHVYSL 293 (419)
T ss_dssp ECCEECSS----CCCCEEEEEESSSCCSSEEECTTTCEEEECSC----------------------CCTTCTTSCSEEEE
T ss_pred EEEEecCC----CCceEEEEecCCCCCCcEEEECCCCEEEECcc----------------------cCccccccccEEEE
Confidence 57899986 46799999865544579999999999999999 56663222247999
Q ss_pred EEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 82 TVIAEDNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 82 ~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
.|.|+|.+ ++++++++|.|+|.|+|||+|+|.++.|
T Consensus 294 ~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~ 329 (419)
T 3ubh_A 294 IVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDY 329 (419)
T ss_dssp EEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEE
T ss_pred EEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcc
Confidence 99999754 4689999999999999999999998754
No 33
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.72 E-value=7.6e-18 Score=139.73 Aligned_cols=89 Identities=25% Similarity=0.364 Sum_probs=76.7
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCC-CcceEE
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE-REKEIY 80 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~-~~~~~~ 80 (118)
+|.|+|+|.| .|+.++|+|.... ..+|.||+.+|.|++.+. ||||... ....|.
T Consensus 508 ~v~A~D~D~g-~n~~v~Ysi~~~~--~~~F~Id~~tG~I~~~~~----------------------LDrE~~~~~~~~y~ 562 (880)
T 1q55_A 508 SLVAQDPDKQ-QIQKLSYFIGNDP--ARWLTVNKDNGIVTGNGN----------------------LDRESEYVKNNTYT 562 (880)
T ss_dssp ECCEECCCTT-CCCCEEEEECCCS--SCCCEEETTTTEEEECSC----------------------CCTTSSSCCSSCCE
T ss_pred EEEEEeCCCC-CCCcEEEEECCCC--CCCEEEeCCccEEEECCc----------------------cCcccccCCCCEEE
Confidence 5789999998 6899999998543 359999999999999999 5666210 126899
Q ss_pred EEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCC
Q psy9968 81 ITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115 (118)
Q Consensus 81 l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~ 115 (118)
+.|.|+|.|.|+++++++|.|+|.|+|||+|+|.+
T Consensus 563 l~V~A~D~g~p~~sst~tv~I~V~DvNDn~P~f~~ 597 (880)
T 1q55_A 563 VIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSP 597 (880)
T ss_dssp EEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSC
T ss_pred EEEEEEECCCCCcEeEEEEEEEEEeCCCCCCCccC
Confidence 99999999999999999999999999999999974
No 34
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.72 E-value=2.9e-17 Score=103.87 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=64.9
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCC---CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAP---GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~---~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|+|+|+|. .|+|+|...+ +....|.||+.||.|++.++ |||| ....
T Consensus 23 ~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~ 72 (99)
T 3k6i_A 23 KVIRSEGTE-----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRP----------------------LDRE---AIAN 72 (99)
T ss_dssp ECEETTCCS-----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCCE
T ss_pred EEEEEcCCC-----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcc----------------------cCCc---cCCE
Confidence 688999996 5999998532 22468999999999999999 7887 6789
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEe
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVED 105 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~D 105 (118)
|.|.|+|+|.|+|++++.+.|.|+|.|
T Consensus 73 y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 73 YELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 999999999999999999999999987
No 35
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.72 E-value=2.1e-17 Score=104.71 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=64.8
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeCC---CCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKAP---GERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~~---~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|+|+|+|. .|+|+|...+ +...+|.||+.||.|++.++ |||| ....
T Consensus 24 ~V~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~ 73 (100)
T 3k6f_A 24 KVVDSDRPE-----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRT----------------------LDRE---TIAT 73 (100)
T ss_dssp ECEETTCCT-----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCSE
T ss_pred EEEEEcCCC-----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcc----------------------cCCc---CCCE
Confidence 688999996 4899998632 22468999999999999999 7887 6789
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEe
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVED 105 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~D 105 (118)
|.|.|+|+|.|+|++++++.|.|+|.|
T Consensus 74 y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 74 YQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCcccceEEEEEEEEC
Confidence 999999999999999999999999987
No 36
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.70 E-value=3.8e-17 Score=103.34 Aligned_cols=74 Identities=22% Similarity=0.312 Sum_probs=64.4
Q ss_pred EEEEEeCCCCCCCCcEEEEEEeC---CCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 2 QVHATDVDPPSNGGTIQYRIIKA---PGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 2 ~v~A~D~D~~~~n~~i~y~i~~~---~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
+|+|+|+|. .|+|+|... ++....|.||+.||.|++.++ |||| .+..
T Consensus 23 ~v~A~D~D~-----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~----------------------LDrE---~~~~ 72 (99)
T 3k6d_A 23 RVVVSDRIP-----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKA----------------------LDRE---AIPS 72 (99)
T ss_dssp ECBCSSCCT-----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSC----------------------CCTT---TCCE
T ss_pred EEEEECCCC-----cEEEEEecCcCCCCCCCEEEEECCceEEEECcC----------------------CCcc---cCce
Confidence 678999986 589999853 222468999999999999999 7887 6679
Q ss_pred EEEEEEEEECCCCCCeeEEEEEEEEEe
Q psy9968 79 IYITVIAEDNGTPQLSDACTMKITVED 105 (118)
Q Consensus 79 ~~l~v~a~D~g~p~~s~~~~v~I~v~D 105 (118)
|.|.|.|+|.|+|++++++.|.|+|.|
T Consensus 73 y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 73 YQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 999999999999999999999999987
No 37
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.60 E-value=2.1e-15 Score=106.53 Aligned_cols=80 Identities=31% Similarity=0.465 Sum_probs=68.2
Q ss_pred CEEEEEeCCCCC--CCCcEEEEEEeCCC---CCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCC
Q psy9968 1 MQVHATDVDPPS--NGGTIQYRIIKAPG---ERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPE 74 (118)
Q Consensus 1 ~~v~A~D~D~~~--~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~ 74 (118)
++|+|+|+|.+. .|+.++|+|....+ ...+|.|++.+|.|++. +. ||||
T Consensus 128 ~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~----------------------LD~E--- 182 (213)
T 3qrb_A 128 MKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSG----------------------LDRE--- 182 (213)
T ss_dssp EECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSC----------------------CCTT---
T ss_pred EEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCC----------------------CCCc---
Confidence 368899999982 47899999986321 34589999999999997 66 7887
Q ss_pred CcceEEEEEEEEECCCCCCeeEEEEEEEEEe
Q psy9968 75 REKEIYITVIAEDNGTPQLSDACTMKITVED 105 (118)
Q Consensus 75 ~~~~~~l~v~a~D~g~p~~s~~~~v~I~v~D 105 (118)
....|.|.|.|+|.|.|+++++++|.|+|.|
T Consensus 183 ~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 183 SYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp TCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred cCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 6679999999999999999999999999987
No 38
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.59 E-value=3.5e-15 Score=105.08 Aligned_cols=75 Identities=37% Similarity=0.591 Sum_probs=64.9
Q ss_pred EEEEEeCCC---CCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCCcc
Q psy9968 2 QVHATDVDP---PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77 (118)
Q Consensus 2 ~v~A~D~D~---~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~ 77 (118)
+|.|+|+|. | .|++++|+|..+. .+|.|++.+|.|++. +. |||| ...
T Consensus 127 ~v~A~D~D~~~~g-~n~~i~Y~i~~~~---~~F~Id~~tG~i~~~~~~----------------------lD~E---~~~ 177 (207)
T 3lnd_A 127 QVTATDADDPTYG-NSAKVVYSILQGQ---PYFSVESETGIIKTALLN----------------------MDRE---NRE 177 (207)
T ss_dssp ECCEECSSCTTSS-STTCCEEEEEESG---GGEEECTTTCEEEECCSS----------------------CCC-----CC
T ss_pred EEEEEeCCCCCCC-CCcEEEEEEcCCC---CCEEEcCCCcEEEECccc----------------------CCcc---cCC
Confidence 688999998 6 6889999999543 489999999999998 77 7887 667
Q ss_pred eEEEEEEEEECCCC--CCeeEEEEEEEEEe
Q psy9968 78 EIYITVIAEDNGTP--QLSDACTMKITVED 105 (118)
Q Consensus 78 ~~~l~v~a~D~g~p--~~s~~~~v~I~v~D 105 (118)
.|.|.|.|+|.|.| +++++++|.|+|.|
T Consensus 178 ~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 178 QYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 99999999999887 89999999999987
No 39
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.59 E-value=9e-15 Score=102.81 Aligned_cols=74 Identities=34% Similarity=0.508 Sum_probs=65.1
Q ss_pred EEEEEeCCC---CCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCCcc
Q psy9968 2 QVHATDVDP---PSNGGTIQYRIIKAPGERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPEREK 77 (118)
Q Consensus 2 ~v~A~D~D~---~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~ 77 (118)
+|.|+|+|. | .|++++|+|..+. .+|.|+ .+|.|++. +. |||| ...
T Consensus 125 ~v~A~D~D~~~~g-~n~~i~Y~i~~~~---~~F~I~-~tG~i~~~~~~----------------------LD~E---~~~ 174 (203)
T 3ppe_A 125 KVTAEDADDPTVA-GHATVTYQIIKGN---EYFTVD-DSGVIFTARAD----------------------LDRE---SQS 174 (203)
T ss_dssp ECCEECCSCTTSS-STTCEEEEEEEST---TTEEEC-TTSEEEESCSC----------------------CCTT---TCS
T ss_pred EEEEEcCCCcCCC-CceEEEEEEeCCC---CcEEEe-CCeEEEECCcC----------------------CCcc---cCC
Confidence 688999994 6 6899999999643 389999 99999998 77 7887 667
Q ss_pred eEEEEEEEEEC-CCCCCeeEEEEEEEEEe
Q psy9968 78 EIYITVIAEDN-GTPQLSDACTMKITVED 105 (118)
Q Consensus 78 ~~~l~v~a~D~-g~p~~s~~~~v~I~v~D 105 (118)
.|.|.|.|+|. |.|+++++++|.|+|.|
T Consensus 175 ~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 175 AYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 99999999998 77889999999999987
No 40
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.58 E-value=2.6e-15 Score=106.44 Aligned_cols=78 Identities=26% Similarity=0.401 Sum_probs=66.5
Q ss_pred EEEEEeCCC--CCCCCcEEEEEEeCCCC---CccEEEeCCCCEEEEe---eeecCCCCcccceeeeeeeeecccCCCCCC
Q psy9968 2 QVHATDVDP--PSNGGTIQYRIIKAPGE---RAKFSIDKETGIVKTL---YALDRDDPEREKEIYITTDIRVQALDRDDP 73 (118)
Q Consensus 2 ~v~A~D~D~--~~~n~~i~y~i~~~~~~---~~~F~id~~tG~i~~~---~~ld~e~~~~~~~~~~~~~~~~~~lDre~~ 73 (118)
+|+|+|+|. + .|++++|+|....+. ..+|.||+.+|.|++. +. ||||
T Consensus 129 ~v~A~D~D~~~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~----------------------LD~E-- 183 (218)
T 3k5r_A 129 RMTAFDADDPAT-DNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPAL----------------------LDRE-- 183 (218)
T ss_dssp ECCCSCSSSSCG-GGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGG----------------------CCGG--
T ss_pred EEEEEeCCCCCC-CCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCC----------------------CCcc--
Confidence 678999999 5 689999999864332 2579999999999987 46 7887
Q ss_pred CC--cceEEEEEEEEECC--CCCCeeEEEEEEEEEe
Q psy9968 74 ER--EKEIYITVIAEDNG--TPQLSDACTMKITVED 105 (118)
Q Consensus 74 ~~--~~~~~l~v~a~D~g--~p~~s~~~~v~I~v~D 105 (118)
. ...|.|.|.|+|.| .|+++++++|.|+|.|
T Consensus 184 -~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 184 -TLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp -GCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred -ccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 5 56999999999999 8899999999999987
No 41
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.58 E-value=1.8e-15 Score=107.32 Aligned_cols=78 Identities=33% Similarity=0.476 Sum_probs=67.2
Q ss_pred EEEEEeCCC--CCCCCcEEEEEEeCCC---CCccEEEeCCCCEEEEe-eeecCCCCcccceeeeeeeeecccCCCCCCCC
Q psy9968 2 QVHATDVDP--PSNGGTIQYRIIKAPG---ERAKFSIDKETGIVKTL-YALDRDDPEREKEIYITTDIRVQALDRDDPER 75 (118)
Q Consensus 2 ~v~A~D~D~--~~~n~~i~y~i~~~~~---~~~~F~id~~tG~i~~~-~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~ 75 (118)
+|.|+|+|. | .|++++|+|..+.+ ...+|.|++.||.|++. +. |||| .
T Consensus 129 ~v~A~D~D~~~g-~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~----------------------LD~E---~ 182 (215)
T 2qvi_A 129 TVTAIDADDPNA-LNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAG----------------------LDRE---K 182 (215)
T ss_dssp ECCCBCSSCTTS-TTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCC----------------------CCTT---T
T ss_pred EEEEEeCCCCCC-CCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCC----------------------CCcc---c
Confidence 678999998 5 68999999996532 24689999999999996 66 7887 6
Q ss_pred cceEEEEEEEEECCCC---CCeeEEEEEEEEEe
Q psy9968 76 EKEIYITVIAEDNGTP---QLSDACTMKITVED 105 (118)
Q Consensus 76 ~~~~~l~v~a~D~g~p---~~s~~~~v~I~v~D 105 (118)
...|.|.|.|+|.|+| +++++++|.|+|.|
T Consensus 183 ~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 183 VQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 6799999999999887 79999999999987
No 42
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.50 E-value=3.8e-14 Score=102.33 Aligned_cols=78 Identities=26% Similarity=0.369 Sum_probs=64.9
Q ss_pred EEEEeCCCCCCCCcEEEEEEeCCCC---CccEEEeC-CCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcce
Q psy9968 3 VHATDVDPPSNGGTIQYRIIKAPGE---RAKFSIDK-ETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKE 78 (118)
Q Consensus 3 v~A~D~D~~~~n~~i~y~i~~~~~~---~~~F~id~-~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~ 78 (118)
|+|+|+|.| .|++|+|+|...... ...|.||+ .||.|++.+. |||| ....
T Consensus 154 v~A~D~D~g-~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~----------------------LD~E---~~~~ 207 (242)
T 4apx_B 154 NGATDIDDG-PNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKR----------------------LNYE---DKTR 207 (242)
T ss_dssp TSEECCSSG-GGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSC----------------------CCTT---TCCE
T ss_pred cccccCCCC-cCCceEEEEecCCCCcccccceEEcCCCceEEEECCc----------------------CChh---hCCE
Confidence 569999999 799999999864332 24799995 5999999999 6887 5679
Q ss_pred EEEEEEEEECCCC---CCeeEEEEEEEEEeC
Q psy9968 79 IYITVIAEDNGTP---QLSDACTMKITVEDI 106 (118)
Q Consensus 79 ~~l~v~a~D~g~p---~~s~~~~v~I~v~Dv 106 (118)
|.|.|.|+|.|.| ++++++.|+|+|+--
T Consensus 208 y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~~ 238 (242)
T 4apx_B 208 YYVIIQANDRAQNLNERRTTTTTLTVDLEHH 238 (242)
T ss_dssp EEEEEEEEECCSSGGGCCEEEEEEEEEEECC
T ss_pred EEEEEEEEECCcCchhcccCCceEEEEEeec
Confidence 9999999999987 478889999998754
No 43
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.49 E-value=1.6e-13 Score=99.09 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=62.8
Q ss_pred eCCCCCCCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEEEEE
Q psy9968 7 DVDPPSNGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAE 86 (118)
Q Consensus 7 D~D~~~~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v~a~ 86 (118)
|.|.+ .|+.++|+|.... ..+|.|++.+|.+++... .+.||||.......+.+.+.+.
T Consensus 44 ~~d~~-~n~~i~ysl~~~~--~~~f~id~~tg~~~l~~t-------------------~~~LDrE~~~~~~~~~~~v~~~ 101 (242)
T 4apx_B 44 GTAGG-PDPTIELSLKDNV--DYWVLLDPVKQMLFLNST-------------------GRVLDRDPPMNIHSIVVQVQCV 101 (242)
T ss_dssp SCBSS-SSCSEEEEEESCG--GGCEEEETTTTEEEECCT-------------------TSCCCCSTTTCCCEEEEEEEEE
T ss_pred CCCCC-CCCEEEEEEecCC--CceEEECCCCCEEEEEec-------------------CCceeccCCCceEEEEEEEEeE
Confidence 34445 6889999998433 358999999999987532 0117887332223445556665
Q ss_pred ECCCCCCeeEEEEEEEEEeCCCCCCeeCCCCC
Q psy9968 87 DNGTPQLSDACTMKITVEDINDNEPMFDRVQY 118 (118)
Q Consensus 87 D~g~p~~s~~~~v~I~v~DvNDn~P~F~~~~Y 118 (118)
+.+. +..+.+.|.|.|.|+|||+|+|.+..|
T Consensus 102 ~~~~-~~~~~~~V~I~V~DvNDn~P~F~~~~y 132 (242)
T 4apx_B 102 NKKV-GTVIYHEVRIVVRDRNDNSPTFKHESY 132 (242)
T ss_dssp ETTT-CCEEEEEEEEEEECCCCCCCEESSSCE
T ss_pred CCCC-CeEEEEEEEEEEEeCCCCCCcccceee
Confidence 6542 456778899999999999999998876
No 44
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.33 E-value=1.3e-13 Score=87.63 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=52.9
Q ss_pred EEeCCCCC-CCCcEEEEEEeCCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCC-CcceEEEE
Q psy9968 5 ATDVDPPS-NGGTIQYRIIKAPGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPE-REKEIYIT 82 (118)
Q Consensus 5 A~D~D~~~-~n~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~-~~~~~~l~ 82 (118)
|.|+|.+. ..+.++|+|..+ +...+|.||+.||.|++.++ ||||..+ +...|.+.
T Consensus 23 a~D~~~~~~~~~~~~y~i~~~-~~~~~F~Id~~tG~i~~~~~----------------------LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 23 AQDLGLELTELVPRLFRVASK-DRGDLLEVNLQNGILFVNSR----------------------IDREELCGRSAECSIH 79 (103)
T ss_dssp HHHHTCCHHHHTTTTBCCBCS-SCSCSEEEETTTTEEEECSC----------------------CSHHHHCSSSSSCEEE
T ss_pred EeccCCCCcccccEEEEEEeC-CCccEEEEECCeEEEEECCc----------------------CccccccCCCCcEEEE
Confidence 66776541 114689999853 33579999999999999999 5665211 11234444
Q ss_pred EEEEECCCCCCeeEEEEEEEEEeCCCC
Q psy9968 83 VIAEDNGTPQLSDACTMKITVEDINDN 109 (118)
Q Consensus 83 v~a~D~g~p~~s~~~~v~I~v~DvNDn 109 (118)
+.+... .| + ..+.|.|+|.|+|||
T Consensus 80 ~~v~~~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 80 LEVIVD-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEET-TT-T-EEEEEEEEEECCSCC
T ss_pred EEEEEC-CC-C-EEEEEEEEEEEcCCC
Confidence 444432 33 3 488999999999998
No 45
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.00 E-value=2.8 Score=25.50 Aligned_cols=30 Identities=13% Similarity=0.276 Sum_probs=25.1
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEEEeCCC
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITVEDIND 108 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvND 108 (118)
..|.+.+.++|..+ .+++.++.|+|...+.
T Consensus 69 G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 69 GTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp SEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred eEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 58999999999864 6788899999987654
No 46
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=84.91 E-value=11 Score=29.01 Aligned_cols=27 Identities=37% Similarity=0.503 Sum_probs=25.0
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEE
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITV 103 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v 103 (118)
..|.|.++++|.+.|+++++..|.|+|
T Consensus 410 ~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 410 KDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred cEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 589999999999999999999999887
No 47
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=60.66 E-value=31 Score=27.41 Aligned_cols=34 Identities=6% Similarity=0.150 Sum_probs=24.3
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeCC
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFDR 115 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~~ 115 (118)
..|+|.|.|.+..+.-....+.+.|+| .||..++
T Consensus 720 G~Y~f~V~a~~~~g~w~~~~~~l~I~I-----~Pp~~~~ 753 (758)
T 3ott_A 720 GNYQLIISKLERDGQPSNRPHILNIRI-----LPPWLEH 753 (758)
T ss_dssp EEEEEEEEEBCTTSCBCSSCEEEEEEE-----CCGGGGG
T ss_pred ccEEEEEEEeCCCCCccCccEEEEEEE-----CCcchhh
Confidence 589999999997654333456677777 5776654
No 48
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=59.99 E-value=22 Score=20.37 Aligned_cols=27 Identities=11% Similarity=0.196 Sum_probs=20.5
Q ss_pred cceEEEEEEEEECCCCCCeeEEEEEEEEE
Q psy9968 76 EKEIYITVIAEDNGTPQLSDACTMKITVE 104 (118)
Q Consensus 76 ~~~~~l~v~a~D~g~p~~s~~~~v~I~v~ 104 (118)
...|.+.+.++|..+ .+++..+.|+|.
T Consensus 58 ~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 58 AGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp CEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred CeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 368999999999865 456667777764
No 49
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=56.51 E-value=31 Score=21.02 Aligned_cols=39 Identities=13% Similarity=0.133 Sum_probs=28.2
Q ss_pred CCCCCCCCcceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCC
Q psy9968 68 LDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEP 111 (118)
Q Consensus 68 lDre~~~~~~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P 111 (118)
.|-. +...|.++..++|..+ ..++++.+|+|.+..+..|
T Consensus 53 Vdt~---k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 53 VDTT---KAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CCSS---SCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCC
T ss_pred ccCC---CceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccC
Confidence 5553 5569999999999865 4667778888887654443
No 50
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=44.78 E-value=81 Score=22.38 Aligned_cols=65 Identities=23% Similarity=0.239 Sum_probs=38.7
Q ss_pred EEEEEEe--CCCCCccEEEeCCCCEEEEeeeecCCCCcccceeeeeeeeecccCCCCCCCCcceEEEEEEEEEC---CCC
Q psy9968 17 IQYRIIK--APGERAKFSIDKETGIVKTLYALDRDDPEREKEIYITTDIRVQALDRDDPEREKEIYITVIAEDN---GTP 91 (118)
Q Consensus 17 i~y~i~~--~~~~~~~F~id~~tG~i~~~~~ld~e~~~~~~~~~~~~~~~~~~lDre~~~~~~~~~l~v~a~D~---g~p 91 (118)
..|++.. +.....|...|+.++.+.-.- ++.+ ...|.+.|.|.+. |..
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~P-----------------------~~~D----~G~~~i~VtA~~~~~~g~~ 85 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGLP-----------------------LDTD----KGVHYISVSAARLGANGSH 85 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEECC-----------------------CGGG----CEEEEEEEEEEEECTTSCE
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEecc-----------------------CCCC----cceEEEEEEEeeccCCCCc
Confidence 4566654 222346788888888654432 2432 3579999999865 322
Q ss_pred CCeeEEEEEEEEE--eCCC
Q psy9968 92 QLSDACTMKITVE--DIND 108 (118)
Q Consensus 92 ~~s~~~~v~I~v~--DvND 108 (118)
....+..+.|.|. |.|+
T Consensus 86 ~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 86 VPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEEEEEEEESSCCC-
T ss_pred cccccceEEEEEecCCCcc
Confidence 3344556677777 6666
No 51
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=44.63 E-value=48 Score=19.85 Aligned_cols=27 Identities=33% Similarity=0.330 Sum_probs=18.3
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEEE
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITVE 104 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v~ 104 (118)
..|.|.+.|.|..+.. .....|.|+|.
T Consensus 61 G~htl~a~AtD~~G~~-~tS~~v~vtV~ 87 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAA-STPDSVKIFVK 87 (98)
T ss_dssp EEEEEEEEEEETTCCB-CCCEEEEEEEE
T ss_pred ccEEEEEEEEECCCCE-EeeeEEEEEEC
Confidence 5899999999986532 22445566664
No 52
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=33.90 E-value=58 Score=21.26 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=7.5
Q ss_pred EEEEEEEEeCCCCCCeeC
Q psy9968 97 CTMKITVEDINDNEPMFD 114 (118)
Q Consensus 97 ~~v~I~v~DvNDn~P~F~ 114 (118)
...+|+|.| ||++++|.
T Consensus 141 s~atVtI~D-dD~aGi~~ 157 (160)
T 3gin_A 141 STATVTIFD-DDHAGIFT 157 (160)
T ss_dssp SEEEEEEEC-CCC-----
T ss_pred cEEEEEEEc-CCCCCEEE
Confidence 345666666 77788875
No 53
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=33.50 E-value=1.8e+02 Score=23.08 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=21.8
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeC
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~ 114 (118)
..|+|.|.|.+.++.-....+.+.|+| .||.+.
T Consensus 754 G~Y~f~V~a~n~~g~w~~~~~~l~i~I-----~Ppww~ 786 (795)
T 4a2l_A 754 GTYQFLVKAANSDGKWNPIPTALEIIV-----LPIWYK 786 (795)
T ss_dssp EEEEEEEEEECTTSCBCSSCEEEEEEE-----CCCC--
T ss_pred CeEEEEEEEECCCCccCCCceEEEEEE-----ECCccc
Confidence 589999999998653223356677777 466544
No 54
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=31.85 E-value=64 Score=23.25 Aligned_cols=49 Identities=20% Similarity=0.384 Sum_probs=24.3
Q ss_pred ecccCCCCCCCCcceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCeeC
Q psy9968 64 RVQALDRDDPEREKEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPMFD 114 (118)
Q Consensus 64 ~~~~lDre~~~~~~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~F~ 114 (118)
.+..+|-...+....|.+.+..-. ++..+......+|+|.| ||++|.|.
T Consensus 78 ~V~I~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~ 126 (298)
T 3rb5_A 78 RIEVIDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFA 126 (298)
T ss_dssp EECBCCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEE
T ss_pred EEEEeCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccc
Confidence 444455443333334555444321 22233333455677776 67788753
No 55
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.33 E-value=76 Score=19.77 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=20.2
Q ss_pred cceEEEEEEEEECCCCCCeeEEEEEEEEEe
Q psy9968 76 EKEIYITVIAEDNGTPQLSDACTMKITVED 105 (118)
Q Consensus 76 ~~~~~l~v~a~D~g~p~~s~~~~v~I~v~D 105 (118)
...|.|.+.++|... .+...++|+|.-
T Consensus 79 eG~Y~FqltVtd~~~---~ge~~vnVTV~P 105 (113)
T 2e7m_A 79 VGLYVFKVTVSSENA---FGEGFVNVTVKP 105 (113)
T ss_dssp SEEEEECCEEEETTE---EEECCEEEEEEC
T ss_pred cEEEEEEEEEECCCC---CccceEEEEEcC
Confidence 468999999999875 556667777753
No 56
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=30.89 E-value=60 Score=19.79 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=21.6
Q ss_pred CcEEEEEEeCCCCCccEEEeCCCCEEEEeee
Q psy9968 15 GTIQYRIIKAPGERAKFSIDKETGIVKTLYA 45 (118)
Q Consensus 15 ~~i~y~i~~~~~~~~~F~id~~tG~i~~~~~ 45 (118)
.++.|.+-...+. .|.+.|..|.|.-...
T Consensus 29 ~~vaFKVKtT~p~--~y~VrP~~G~I~P~~~ 57 (109)
T 1row_A 29 EKIVFKIKSSNNN--EYRIAPVFGFVDPSGS 57 (109)
T ss_dssp SCEEEEEEESCSS--SEEEECSEEEECTTEE
T ss_pred CeEEEEEEeCCCC--ceEEcCCceEECCCCe
Confidence 5788999866554 8999999997644333
No 57
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=29.44 E-value=60 Score=20.35 Aligned_cols=51 Identities=20% Similarity=0.363 Sum_probs=16.9
Q ss_pred ecccCCCCCCCCcceEEEEEEEEEC-CCCCCeeEEEEEEEEEeCCCCCCe--eCCCC
Q psy9968 64 RVQALDRDDPEREKEIYITVIAEDN-GTPQLSDACTMKITVEDINDNEPM--FDRVQ 117 (118)
Q Consensus 64 ~~~~lDre~~~~~~~~~l~v~a~D~-g~p~~s~~~~v~I~v~DvNDn~P~--F~~~~ 117 (118)
.+..+|-...+....|.+.+. .. ++..+......+|+|.| +|.+|. |..+.
T Consensus 73 ~V~I~dD~~~E~~E~F~v~L~--~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~ 126 (137)
T 3ead_A 73 RIEVIDDDVFEEDECFYIRLF--NPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSV 126 (137)
T ss_dssp EEEBCCCSSCCCCEEEEEEEE--CCCTTCEECSCSEEEEEEEC-CC-----------
T ss_pred EEEEecCCcccCcEEEEEEEE--CCCCCcEECCCcEEEEEEEC-CCCCCEEEECCCc
Confidence 344455443333334444444 33 22122222233455555 477786 44443
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=28.61 E-value=87 Score=20.74 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=21.0
Q ss_pred ceEEEEEEEEECCCCCCeeEEEEEEEEEeCCCCCCe
Q psy9968 77 KEIYITVIAEDNGTPQLSDACTMKITVEDINDNEPM 112 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~P~ 112 (118)
..|.|.+.|.|..+.. +....+.|.|.+ ..+|.
T Consensus 61 G~htlta~A~D~aGn~-s~s~~v~vtV~~--~~~Pt 93 (190)
T 3pdd_A 61 GAYNLKAVAVLSDGRR-IESPVTPVLVKV--IVKPT 93 (190)
T ss_dssp EEEEEEEEEEETTSCE-EECCCEEEEEEC--CCCCE
T ss_pred ccEEEEEEEEECCCCE-eeecceeEEecc--CCCCc
Confidence 5899999999985522 222345666655 44664
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=27.38 E-value=76 Score=19.70 Aligned_cols=27 Identities=11% Similarity=0.369 Sum_probs=20.5
Q ss_pred CcEEEEEEeCCCCCccEEEeCCCCEEEEe
Q psy9968 15 GTIQYRIIKAPGERAKFSIDKETGIVKTL 43 (118)
Q Consensus 15 ~~i~y~i~~~~~~~~~F~id~~tG~i~~~ 43 (118)
.++.|.+-...+. .|.+.|..|.|.-.
T Consensus 37 ~~vAFKVKtT~p~--~YrVrP~~G~I~Pg 63 (116)
T 1m1s_A 37 SRLAFKVKSSNNE--HYRVRPVYGFVDAK 63 (116)
T ss_dssp SEEEEEEEESCTT--TEEEECSEEEECTT
T ss_pred CeEEEEEEecCCC--ceEEcCCceEECCC
Confidence 5788888766554 89999999976443
No 60
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=24.14 E-value=32 Score=22.15 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=17.6
Q ss_pred EEEEEEECCCCCCeeEEEEEEEEEeCCCCC
Q psy9968 81 ITVIAEDNGTPQLSDACTMKITVEDINDNE 110 (118)
Q Consensus 81 l~v~a~D~g~p~~s~~~~v~I~v~DvNDn~ 110 (118)
|.+...|...-.--..++|++-|.|+|.||
T Consensus 50 LtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 50 LTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred cEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 344555543211124567888899998775
No 61
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=24.11 E-value=92 Score=19.26 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=19.3
Q ss_pred CcEEEEEEeCCCCCccEEEeCCCCEEEE
Q psy9968 15 GTIQYRIIKAPGERAKFSIDKETGIVKT 42 (118)
Q Consensus 15 ~~i~y~i~~~~~~~~~F~id~~tG~i~~ 42 (118)
.+|.|.|-...+. .|.+.|.+|.|.-
T Consensus 39 ~~vaFKVKTT~p~--~y~VrP~~Gii~P 64 (126)
T 1msp_A 39 RRIGWAIKTTNMR--RLSVDPPCGVLDP 64 (126)
T ss_dssp SCEEEEEEESCTT--TEEEESCEEEECT
T ss_pred CeEEEEEEcCCCC--cEEEECCCeEECC
Confidence 5688888765554 7999999996543
No 62
>3if8_A Hzwilch, protein zwilch homolog; incomplete beta-barrel, alternative splicing, cell cycle, CE division, kinetochore, mitosis, polymorphism; 2.55A {Homo sapiens}
Probab=23.67 E-value=29 Score=25.42 Aligned_cols=26 Identities=31% Similarity=0.440 Sum_probs=13.0
Q ss_pred CCCCCeeEEEEEEEEEeCCCCCCeeC
Q psy9968 89 GTPQLSDACTMKITVEDINDNEPMFD 114 (118)
Q Consensus 89 g~p~~s~~~~v~I~v~DvNDn~P~F~ 114 (118)
..||++++++++|.|....-..|.+.
T Consensus 244 q~PPLsStAtLNIkvesGdpRspl~~ 269 (339)
T 3if8_A 244 QIPPLSSTATLNIKVESGEPRGPLNH 269 (339)
T ss_dssp CCCCTTSEEEEEEC-----------C
T ss_pred cCCCccccceEEEEecCCCccchhHH
Confidence 35899999999999998777676553
No 63
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=20.97 E-value=1.2e+02 Score=17.03 Aligned_cols=16 Identities=13% Similarity=0.171 Sum_probs=12.7
Q ss_pred ceEEEEEEEEECCCCC
Q psy9968 77 KEIYITVIAEDNGTPQ 92 (118)
Q Consensus 77 ~~~~l~v~a~D~g~p~ 92 (118)
..|.+.|.|....+.+
T Consensus 66 t~Y~~~V~A~n~~g~s 81 (100)
T 3b83_A 66 TTYEIRIVARNGQQYS 81 (100)
T ss_dssp CEEEEEEEEEETTEEC
T ss_pred CEEEEEEEEEeCCCCC
Confidence 4899999999876533
No 64
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=20.19 E-value=94 Score=19.09 Aligned_cols=26 Identities=4% Similarity=0.441 Sum_probs=19.1
Q ss_pred CcEEEEEEeCCCCCccEEEeCCCCEEEE
Q psy9968 15 GTIQYRIIKAPGERAKFSIDKETGIVKT 42 (118)
Q Consensus 15 ~~i~y~i~~~~~~~~~F~id~~tG~i~~ 42 (118)
.+|.|.+-...+. .|.+.|..|.|.-
T Consensus 41 ~~vaFKVKTT~p~--~y~VrP~~G~i~P 66 (128)
T 1z9l_A 41 RKVCFKVKTTAPR--RYCVRPNSGVIDP 66 (128)
T ss_dssp SCEEEEEEESCGG--GEEEESCEEEECT
T ss_pred CeEEEEEECCCCC--ceEEeCCCcEECC
Confidence 5688888765543 7999999987543
Done!