BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9969
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSD 60
S ++ TD+GDLNFDYLSNFGPRFRKLADMYGE+PSD
Sbjct: 1459 SLASCTDDGDLNFDYLSNFGPRFRKLADMYGEEPSD 1494
>sp|Q90762|CADH6_CHICK Cadherin-6 OS=Gallus gallus GN=CDH6 PE=2 SV=1
Length = 790
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S +VT +GD ++DYLS++GPRF+KLADMYG SD++
Sbjct: 752 SLESVTTDGDQDYDYLSDWGPRFKKLADMYGSMDSDKD 789
>sp|Q3SWX5|CADH6_BOVIN Cadherin-6 OS=Bos taurus GN=CDH6 PE=2 SV=1
Length = 790
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S +VT +GD ++DYLS++GPRF+KLADMYG SD++
Sbjct: 752 SLESVTTDGDQDYDYLSDWGPRFKKLADMYGGVDSDKD 789
>sp|P97326|CADH6_MOUSE Cadherin-6 OS=Mus musculus GN=Cdh6 PE=1 SV=2
Length = 790
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S +VT +GD ++DYLS++GPRF+KLADMYG SD++
Sbjct: 752 SLESVTTDGDQDYDYLSDWGPRFKKLADMYGGMDSDKD 789
>sp|P55285|CADH6_HUMAN Cadherin-6 OS=Homo sapiens GN=CDH6 PE=1 SV=1
Length = 790
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S +VT + D ++DYLS++GPRF+KLADMYG SD++
Sbjct: 752 SLESVTTDADQDYDYLSDWGPRFKKLADMYGGVDSDKD 789
>sp|P55280|CADH6_RAT Cadherin-6 OS=Rattus norvegicus GN=Cdh6 PE=2 SV=1
Length = 789
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S +VT +GD ++ YLS++GPRF+KLADMYG SD++
Sbjct: 751 SLESVTTDGDQDYGYLSDWGPRFKKLADMYGGMDSDKD 788
>sp|P70408|CAD10_MOUSE Cadherin-10 OS=Mus musculus GN=Cdh10 PE=2 SV=3
Length = 788
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 30 TDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
T EGD N+DYL +GPRF KLA+MYG SD++
Sbjct: 755 TTEGDQNYDYLREWGPRFNKLAEMYGGGESDKD 787
>sp|Q9Y6N8|CAD10_HUMAN Cadherin-10 OS=Homo sapiens GN=CDH10 PE=1 SV=2
Length = 788
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 30 TDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
T EGD N+DYL +GPRF KLA+MYG SD++
Sbjct: 755 TTEGDQNYDYLREWGPRFNKLAEMYGGGESDKD 787
>sp|P79995|CAD10_CHICK Cadherin-10 OS=Gallus gallus GN=CDH10 PE=2 SV=1
Length = 789
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 30 TDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
T EGD N+DYL +GPRF KLA+MYG SD++
Sbjct: 755 TTEGDQNYDYLREWGPRFNKLAEMYGGGESDKD 787
>sp|Q9ULB4|CADH9_HUMAN Cadherin-9 OS=Homo sapiens GN=CDH9 PE=2 SV=2
Length = 789
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
S ++T + + ++DYLS++GPRF+KLADMYG D SD +
Sbjct: 752 SLESLTADCNQDYDYLSDWGPRFKKLADMYGGDDSDRD 789
>sp|O93319|CAD11_CHICK Cadherin-11 OS=Gallus gallus GN=CDH11 PE=2 SV=1
Length = 792
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S + T + DL++DYL N+GPRF+KLAD+YG
Sbjct: 753 SLESATTDSDLDYDYLQNWGPRFKKLADLYG 783
>sp|P55288|CAD11_MOUSE Cadherin-11 OS=Mus musculus GN=Cdh11 PE=1 SV=1
Length = 796
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S + T + DL++DYL N+GPRF+KLAD+YG
Sbjct: 757 SLESATTDSDLDYDYLQNWGPRFKKLADLYG 787
>sp|Q5RJH3|CAD12_MOUSE Cadherin-12 OS=Mus musculus GN=Cdh12 PE=2 SV=1
Length = 794
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPS 59
S ++T E D ++DYLS++GPRF+ LADM+GE+ S
Sbjct: 753 SIDSLTTEADQDYDYLSDWGPRFKVLADMFGEEES 787
>sp|P55287|CAD11_HUMAN Cadherin-11 OS=Homo sapiens GN=CDH11 PE=1 SV=2
Length = 796
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S + T + DL++DYL N+GPRF+KLAD+YG
Sbjct: 757 SLESATTDSDLDYDYLQNWGPRFKKLADLYG 787
>sp|P55289|CAD12_HUMAN Cadherin-12 OS=Homo sapiens GN=CDH12 PE=2 SV=2
Length = 794
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPS 59
S ++T E D ++DYL+++GPRF+ LADM+GE+ S
Sbjct: 753 SIDSLTTEADQDYDYLTDWGPRFKVLADMFGEEES 787
>sp|Q90763|CADH7_CHICK Cadherin-7 OS=Gallus gallus GN=CDH7 PE=2 SV=1
Length = 785
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 21/23 (91%)
Query: 36 NFDYLSNFGPRFRKLADMYGEDP 58
N+DYLS++GPRF++LADMYG P
Sbjct: 758 NYDYLSDWGPRFKRLADMYGSGP 780
>sp|P39038|CADH4_MOUSE Cadherin-4 OS=Mus musculus GN=Cdh4 PE=2 SV=1
Length = 913
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 33 GDLNFDYLSNFGPRFRKLADMYGEDPSDEED 63
GD ++DYL+++GPRF+KLADMYG EED
Sbjct: 886 GDQDYDYLNDWGPRFKKLADMYG---GGEED 913
>sp|P55283|CADH4_HUMAN Cadherin-4 OS=Homo sapiens GN=CDH4 PE=2 SV=2
Length = 916
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 3/31 (9%)
Query: 33 GDLNFDYLSNFGPRFRKLADMYGEDPSDEED 63
GD ++DYL+++GPRF+KLADMYG EED
Sbjct: 889 GDQDYDYLNDWGPRFKKLADMYG---GGEED 916
>sp|Q8QGH3|CAD20_CHICK Cadherin-20 OS=Gallus gallus GN=CDH20 PE=1 SV=1
Length = 798
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S +VT + D ++DYL+++GPRF+KLA+MYG
Sbjct: 759 SLQSVTTDSDQSYDYLTDWGPRFKKLAEMYG 789
>sp|P24503|CADH4_CHICK Cadherin-4 OS=Gallus gallus GN=CDH4 PE=2 SV=1
Length = 913
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 33 GDLNFDYLSNFGPRFRKLADMYGEDPSD 60
GD ++DYL+++GPRF+KLADMYG D
Sbjct: 886 GDQDYDYLNDWGPRFKKLADMYGGGEED 913
>sp|P70407|CADH9_MOUSE Cadherin-9 OS=Mus musculus GN=Cdh9 PE=2 SV=2
Length = 786
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSD 60
S ++T + + ++DYLS++GPRF+KLA+MYG + SD
Sbjct: 751 SLESLTADCNQDYDYLSDWGPRFKKLAEMYGGNDSD 786
>sp|P79883|CADH4_XENLA Cadherin-4 OS=Xenopus laevis GN=cdh4 PE=2 SV=1
Length = 922
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 21/22 (95%)
Query: 34 DLNFDYLSNFGPRFRKLADMYG 55
D +FDYL+++GPRF+KLADMYG
Sbjct: 896 DQDFDYLNDWGPRFKKLADMYG 917
>sp|Q90275|CADH2_DANRE Cadherin-2 OS=Danio rerio GN=cdh2 PE=2 SV=2
Length = 893
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 21/22 (95%)
Query: 34 DLNFDYLSNFGPRFRKLADMYG 55
D ++DYL+++GPRFRKLADMYG
Sbjct: 868 DQDYDYLNDWGPRFRKLADMYG 889
>sp|Q9ULB5|CADH7_HUMAN Cadherin-7 OS=Homo sapiens GN=CDH7 PE=2 SV=2
Length = 785
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
N+DYLS++GPRF++LADMYG
Sbjct: 758 NYDYLSDWGPRFKRLADMYG 777
>sp|P15116|CADH2_MOUSE Cadherin-2 OS=Mus musculus GN=Cdh2 PE=1 SV=2
Length = 906
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 21/22 (95%)
Query: 34 DLNFDYLSNFGPRFRKLADMYG 55
D ++DYL+++GPRF+KLADMYG
Sbjct: 881 DQDYDYLNDWGPRFKKLADMYG 902
>sp|Q9Z1Y3|CADH2_RAT Cadherin-2 OS=Rattus norvegicus GN=Cdh2 PE=1 SV=1
Length = 906
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 21/22 (95%)
Query: 34 DLNFDYLSNFGPRFRKLADMYG 55
D ++DYL+++GPRF+KLADMYG
Sbjct: 881 DQDYDYLNDWGPRFKKLADMYG 902
>sp|P55284|CADH5_MOUSE Cadherin-5 OS=Mus musculus GN=Cdh5 PE=1 SV=2
Length = 784
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 35 LNFDYLSNFGPRFRKLADMYGEDPSDE 61
+++D+L+++GPRF+ LA++YG DP +E
Sbjct: 755 IDYDFLNDWGPRFKMLAELYGSDPQEE 781
>sp|P97291|CADH8_MOUSE Cadherin-8 OS=Mus musculus GN=Cdh8 PE=1 SV=2
Length = 799
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 32 EGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
+ D NFDYLS++GPRF++L ++Y SD+E
Sbjct: 768 DSDQNFDYLSDWGPRFKRLGELYSVGESDKE 798
>sp|O54800|CADH8_RAT Cadherin-8 OS=Rattus norvegicus GN=Cdh8 PE=2 SV=1
Length = 799
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 32 EGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
+ D NFDYLS++GPRF++L ++Y SD+E
Sbjct: 768 DSDQNFDYLSDWGPRFKRLGELYSVGESDKE 798
>sp|P55286|CADH8_HUMAN Cadherin-8 OS=Homo sapiens GN=CDH8 PE=1 SV=2
Length = 799
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 32 EGDLNFDYLSNFGPRFRKLADMYGEDPSDEE 62
+ D NFDYLS++GPRF++L ++Y SD+E
Sbjct: 768 DSDQNFDYLSDWGPRFKRLGELYSVGESDKE 798
>sp|Q5DWV1|CAD20_RAT Cadherin-20 OS=Rattus norvegicus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG--EDPS 59
S + T + + +FD+L+++GPRFRKLA++YG E PS
Sbjct: 762 SLQSATSDSEQSFDFLTDWGPRFRKLAELYGASEGPS 798
>sp|Q8BM92|CADH7_MOUSE Cadherin-7 OS=Mus musculus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
N+DYLS++GPRF++LA+MYG
Sbjct: 758 NYDYLSDWGPRFKRLAEMYG 777
>sp|Q9Z0M3|CAD20_MOUSE Cadherin-20 OS=Mus musculus GN=Cdh20 PE=2 SV=1
Length = 801
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S + T + + +FD+L+++GPRFRKLA++YG
Sbjct: 762 SLQSATSDSEQSFDFLTDWGPRFRKLAELYG 792
>sp|Q5DWV2|CADH7_RAT Cadherin-7 OS=Rattus norvegicus GN=Cdh7 PE=2 SV=1
Length = 785
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
N+DYLS++GPRF++LA+MYG
Sbjct: 758 NYDYLSDWGPRFKRLAEMYG 777
>sp|Q9HBT6|CAD20_HUMAN Cadherin-20 OS=Homo sapiens GN=CDH20 PE=2 SV=2
Length = 801
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S + T + + +FD+L+++GPRFRKLA++YG
Sbjct: 762 SLQSATSDSEQSFDFLTDWGPRFRKLAELYG 792
>sp|P10288|CADH2_CHICK Cadherin-2 OS=Gallus gallus GN=CDH2 PE=1 SV=1
Length = 912
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 889 DYDYLNDWGPRFKKLADMYG 908
>sp|Q5R9X1|CADH2_PONAB Cadherin-2 OS=Pongo abelii GN=CDH2 PE=2 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 883 DYDYLNDWGPRFKKLADMYG 902
>sp|P19022|CADH2_HUMAN Cadherin-2 OS=Homo sapiens GN=CDH2 PE=1 SV=4
Length = 906
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 883 DYDYLNDWGPRFKKLADMYG 902
>sp|B0KW95|CADH2_CALJA Cadherin-2 OS=Callithrix jacchus GN=CDH2 PE=3 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 883 DYDYLNDWGPRFKKLADMYG 902
>sp|P19534|CADH2_BOVIN Cadherin-2 (Fragment) OS=Bos taurus GN=CDH2 PE=2 SV=1
Length = 877
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 854 DYDYLNDWGPRFKKLADMYG 873
>sp|B2KI42|CADH2_RHIFE Cadherin-2 OS=Rhinolophus ferrumequinum GN=CDH2 PE=3 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 883 DYDYLNDWGPRFKKLADMYG 902
>sp|P33148|CADHF_XENLA EP-cadherin OS=Xenopus laevis PE=1 SV=2
Length = 880
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 36 NFDYLSNFGPRFRKLADMYGEDPSDE 61
+++YLS++G RFRKLADMYG D +E
Sbjct: 855 DYNYLSDWGSRFRKLADMYGGDDDEE 880
>sp|P33147|CADHO_XENLA Neural cadherin-2 OS=Xenopus laevis PE=2 SV=1
Length = 906
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 883 DYDYLNDWGPRFKKLADMYG 902
>sp|P20310|CADHN_XENLA Neural cadherin-1 OS=Xenopus laevis PE=2 SV=1
Length = 905
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLADMYG
Sbjct: 882 DYDYLNDWGPRFKKLADMYG 901
>sp|Q91838|CAD20_XENLA Cadherin-20 OS=Xenopus laevis GN=cdh20 PE=2 SV=1
Length = 790
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYLS++GPRF+KLA+MYG
Sbjct: 763 SYDYLSDWGPRFKKLAEMYG 782
>sp|P33146|CAD15_MOUSE Cadherin-15 OS=Mus musculus GN=Cdh15 PE=1 SV=3
Length = 784
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Query: 27 STVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S++ DE D ++DYL ++GPRF +LADMYG
Sbjct: 755 SSLGDE-DQDYDYLRDWGPRFARLADMYG 782
>sp|B4USZ0|CADH2_OTOGA Cadherin-2 OS=Otolemur garnettii GN=CDH2 PE=3 SV=1
Length = 906
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 36 NFDYLSNFGPRFRKLADMYG 55
++DYL+++GPRF+KLA+MYG
Sbjct: 883 DYDYLNDWGPRFKKLAEMYG 902
>sp|P55291|CAD15_HUMAN Cadherin-15 OS=Homo sapiens GN=CDH15 PE=1 SV=1
Length = 814
Score = 37.0 bits (84), Expect = 0.041, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 27 STVTDEGDLNFDYLSNFGPRFRKLADMYG 55
S+ DE D ++DYL ++GPRF +LADMYG
Sbjct: 754 SSQGDE-DQDYDYLRDWGPRFARLADMYG 781
>sp|P22223|CADH3_HUMAN Cadherin-3 OS=Homo sapiens GN=CDH3 PE=1 SV=2
Length = 829
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 34 DLNFDYLSNFGPRFRKLADMYG 55
D ++DYL+ +G RF+KLADMYG
Sbjct: 803 DQDYDYLNEWGSRFKKLADMYG 824
>sp|Q13634|CAD18_HUMAN Cadherin-18 OS=Homo sapiens GN=CDH18 PE=2 SV=1
Length = 790
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 25 SPSTVTDEGDLNFDYLSNFGPRFRKLADMYGEDPSD 60
S + T + D ++ YL ++GP F+KLA++YGE S+
Sbjct: 752 SLDSATTQSDQDYHYLGDWGPEFKKLAELYGEIESE 787
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,955,650
Number of Sequences: 539616
Number of extensions: 1124115
Number of successful extensions: 2092
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2015
Number of HSP's gapped (non-prelim): 84
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)