BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9975
(382 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 13/381 (3%)
Query: 5 KYFGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLGTNLFFLRNPKWKLL 64
K +G G P L I DP +I +LVK+ + + + + + +WK L
Sbjct: 48 KVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRL 107
Query: 65 RNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHK-KEWPTRQLMGDAMTDIVCKA 123
R+ F+S KLK I+ Q D L+ L A K + + G D++
Sbjct: 108 RSLLSPTFTSGKLKEMVPIIAQ--YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 165
Query: 124 ICGLEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAK-----KVHIFPRILH 178
G+ I S+ NP V F +I F P+L + +FPR +
Sbjct: 166 SFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVF-PFLIPILEVLNICVFPREVT 224
Query: 179 TYFDDLTWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNIFIMILA 238
+ + E R E + ++ ++ LS V+ I I A
Sbjct: 225 NFLRKSVKRMKESRLE-DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA 283
Query: 239 GYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETL 298
GYE +ELA HPD+Q K+++EI V TYD++ +M++LD V++ETL
Sbjct: 284 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP-TYDTVLQMEYLDMVVNETL 342
Query: 299 RIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEE 358
R++P+A + R C ++ I G I KGV V +P+ ALH DP W +PE + P+RFS++
Sbjct: 343 RLFPIAMRLERVCKKDVEINGM--FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 400
Query: 359 NSASIIPGSYSPFGDGPRICI 379
N +I P Y+PFG GPR CI
Sbjct: 401 NKDNIDPYIYTPFGSGPRNCI 421
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 13/381 (3%)
Query: 5 KYFGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLGTNLFFLRNPKWKLL 64
K +G G P L I DP +I +LVK+ + + + + + +WK L
Sbjct: 49 KVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRL 108
Query: 65 RNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHK-KEWPTRQLMGDAMTDIVCKA 123
R+ F+S KLK I+ Q D L+ L A K + + G D++
Sbjct: 109 RSLLSPTFTSGKLKEMVPIIAQ--YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 166
Query: 124 ICGLEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAK-----KVHIFPRILH 178
G+ I S+ NP V F +I F P+L + +FPR +
Sbjct: 167 SFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVF-PFLIPILEVLNICVFPREVT 225
Query: 179 TYFDDLTWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNIFIMILA 238
+ + E R E + ++ ++ LS V+ I I A
Sbjct: 226 NFLRKSVKRMKESRLE-DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA 284
Query: 239 GYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETL 298
GYE +ELA HPD+Q K+++EI V TYD++ +M++LD V++ETL
Sbjct: 285 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP-TYDTVLQMEYLDMVVNETL 343
Query: 299 RIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEE 358
R++P+A + R C ++ I G I KGV V +P+ ALH DP W +PE + P+RFS++
Sbjct: 344 RLFPIAMRLERVCKKDVEINGM--FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 401
Query: 359 NSASIIPGSYSPFGDGPRICI 379
N +I P Y+PFG GPR CI
Sbjct: 402 NKDNIDPYIYTPFGSGPRNCI 422
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 13/381 (3%)
Query: 5 KYFGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLGTNLFFLRNPKWKLL 64
K +G G P L I DP +I +LVK+ + + + + + +WK L
Sbjct: 50 KVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRL 109
Query: 65 RNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHK-KEWPTRQLMGDAMTDIVCKA 123
R+ F+S KLK I+ Q D L+ L A K + + G D++
Sbjct: 110 RSLLSPTFTSGKLKEMVPIIAQ--YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 167
Query: 124 ICGLEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAK-----KVHIFPRILH 178
G+ I S+ NP V F +I F P+L + +FPR +
Sbjct: 168 SFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVF-PFLIPILEVLNICVFPREVT 226
Query: 179 TYFDDLTWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNIFIMILA 238
+ + E R E + ++ ++ LS V+ I I A
Sbjct: 227 NFLRKSVKRMKESRLE-DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA 285
Query: 239 GYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETL 298
GYE +ELA HPD+Q K+++EI V TYD++ +M++LD V++ETL
Sbjct: 286 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP-TYDTVLQMEYLDMVVNETL 344
Query: 299 RIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEE 358
R++P+A + R C ++ I G I KGV V +P+ ALH DP W +PE + P+RFS++
Sbjct: 345 RLFPIAMRLERVCKKDVEINGM--FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 402
Query: 359 NSASIIPGSYSPFGDGPRICI 379
N +I P Y+PFG GPR CI
Sbjct: 403 NKDNIDPYIYTPFGSGPRNCI 423
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 5/161 (3%)
Query: 220 NRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
N+ LS I +++ AG+E L H DI+++VR+E Q + ++
Sbjct: 236 NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQE--QNKLQLSQEL 293
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHT 339
T ++LKKM +LDQVL E LR+ P FRE +++ G KG V H
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFH--FPKGWLVSYQISQTHA 351
Query: 340 DPALWKDPETYNPDRFSEENSASIIPG-SYSPFGDGPRICI 379
DP L+ DPE ++P+RF+ + SA+ P ++ PFG G R C+
Sbjct: 352 DPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECL 392
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
I ++AG+E + L +P + KV +E +V + +Y +K++K++
Sbjct: 257 QIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP--SYKQVKQLKYV 314
Query: 291 DQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP-ET 349
VL+E LR++P A F +E + G ++ +EKG V + LH D +W D E
Sbjct: 315 GMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEE 373
Query: 350 YNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
+ P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 374 FRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 249 PETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDP- 307
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 308 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDEIMVLIPQ 365
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 366 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 410
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPV 303
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LRI+P A F +E + G ++ +EKG + +
Sbjct: 304 P--SYKQVKQLKYVGMVLNEALRIWPTAPA-FSLYAKEDTMLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 303
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 304 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 303
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 304 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 304
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 305 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 363 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 407
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGKQ 404
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 301
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 302 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 44/338 (13%)
Query: 60 KWKLLRNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMT-- 117
+W R FS + L S + ++ ++ L++ L A + T M D +T
Sbjct: 85 RWHKQRRVIDLAFSRSSLVSLMETF--NEKAEQLVEILEAKADGQ---TPVSMQDMLTYT 139
Query: 118 --DIVCKAICGLEIHSI---KNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAKKVHI 172
DI+ KA G+E + + P + V + +S RNT+ F P K++
Sbjct: 140 AMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITAS-----RNTLAKFLPGKRKQLRE 194
Query: 173 FPRILHTYFDDLTWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNI 232
+ + + ++ R+E ++R + AE E + N
Sbjct: 195 VRESIR-FLRQVGRDWVQRRREA-LKRGEEVPADILTQILK----AEEGAQDDEGLLDNF 248
Query: 233 FIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGK--ITYDSLKKMKFL 290
+AG+E EL+ P+I +++ E+ +V G K + ++ L ++++L
Sbjct: 249 VTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVI---GSKRYLDFEDLGRLQYL 305
Query: 291 DQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
QVL E+LR+YP A FR EE I G + + T + ++DP T+
Sbjct: 306 SQVLKESLRLYPPAWGTFRLLEEETLIDGVR--VPGNTPLLFSTYVMGRMDTYFEDPLTF 363
Query: 351 NPDRFSEENSASIIPG------SYSPFGDGPRICIVSQ 382
NPDRF PG +Y PF G R CI Q
Sbjct: 364 NPDRFG--------PGAPKPRFTYFPFSLGHRSCIGQQ 393
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 303
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 304 P--SYKQVKQLKYVGMVLNEALRLWPTAP-PFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ P+G+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPYGNGQRACIGQQ 404
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 304
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P + F +E + G ++ +EKG + +
Sbjct: 305 -VPSYKQVKQLKYVGMVLNEALRLWPTSPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 363 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 407
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ P+G+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPWGNGQRACIGQQ 404
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 246 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 304
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P F +E + G ++ +EKG + +
Sbjct: 305 -VPSYKQVKQLKYVGMVLNEALRLWPTVPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 362
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 363 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 407
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I + AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 301
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P F +E + G ++ +EKG + +
Sbjct: 302 -VPSYKQVKQLKYVGMVLNEALRLWPTGPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 222 VLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
S+E + ++ +I+AG E +A +P+IQ +V+KEI + +G K ++
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG-KPSW 326
Query: 282 DSLKKMKFLDQVLSETLR---IYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALH 338
D KM + + VL E LR I PL IF E+ + G + I KG V ++H
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIVPLG--IFHATSEDAVVRG--YSIPKGTTVITNLYSVH 382
Query: 339 TDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
D W+DPE ++P+RF + + + PF G R C+
Sbjct: 383 FDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCL 423
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I + AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P F +E + G ++ +EKG + +
Sbjct: 303 -VPSYKQVKQLKYVGMVLNEALRLWP-TGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++ G+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 222 VLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
S+E + ++ +I+AG E +A +P+IQ +V+KEI + +G K ++
Sbjct: 268 TFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG-KPSW 326
Query: 282 DSLKKMKFLDQVLSETLR---IYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALH 338
D KM + + VL E LR I PL IF E+ + G + I KG V ++H
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIVPLG--IFHATSEDAVVRG--YSIPKGTTVITNLYSVH 382
Query: 339 TDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
D W+DPE ++P+RF + + + PF G R C+
Sbjct: 383 FDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCL 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ P G+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPHGNGQRACIGQQ 404
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP- 301
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 302 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R C Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACEGQQ 404
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 303
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 304 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R C Q
Sbjct: 361 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACPGQQ 405
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I ++AG+E + L +P + K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPV 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 P--SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ P G+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPAGNGQRACIGQQ 404
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I + AG+E + L +P K +E +V +
Sbjct: 243 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP- 301
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
+Y +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 302 -VPSYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQ 359
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 360 LHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 404
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P L E I + AG+E + L +P K +E +V +
Sbjct: 244 PETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP- 302
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
++ +K++K++ VL+E LR++P A F +E + G ++ +EKG + +
Sbjct: 303 -VPSHKQVKQLKYVGMVLNEALRLWPTAP-AFSLYAKEDTVLGGEYPLEKGDELMVLIPQ 360
Query: 337 LHTDPALWKDP-ETYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
LH D +W D E + P+RF EN ++I ++ PFG+G R CI Q
Sbjct: 361 LHRDKTVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQQ 405
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ ++ G E LA HP+ D++R E++ VT G + ++ ++K++
Sbjct: 267 QVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT--GGRPVAFEDVRKLRHT 324
Query: 291 DQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
V+ E +R+ P ++ R + E + G + I G + A+ DP + D +
Sbjct: 325 GNVIVEAMRLRPAVWVLTRRAVAESELGG--YRIPAGADIIYSPYAIQRDPKSYDDNLEF 382
Query: 351 NPDRFSEENSASIIPGSYSPFGDGPRIC 378
+PDR+ E +A++ + PF G R C
Sbjct: 383 DPDRWLPERAANVPKYAMKPFSAGKRKC 410
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 218 AENRV-LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
AE R L+RE I M++A + +A HP++++ + KEI+ V E
Sbjct: 285 AEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD 344
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
KI D ++K+K ++ + E++R P+ +++ R+ +E+ I G + ++KG + L
Sbjct: 345 IKI--DDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDG--YPVKKGTNIILNIGR 400
Query: 337 LHTDPALWKDPETYNPDRFSEENSASIIPGSY-SPFGDGPRIC 378
+H K P+ F+ EN A +P Y PFG GPR C
Sbjct: 401 MHRLEFFPK------PNEFTLENFAKNVPYRYFQPFGFGPRGC 437
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 8/202 (3%)
Query: 178 HTYFDDLTWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNIFIMIL 237
H D+ +K I+ R++ + D + R L+ + + ++L
Sbjct: 209 HREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYK------DGRPLTDDEVAGMLIGLLL 262
Query: 238 AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSET 297
AG LA +Q K E K V E+ +TYD LK + LD+ + ET
Sbjct: 263 AGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKET 322
Query: 298 LRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSE 357
LR+ P ++ R + G + I G V + W + +NPDR+ +
Sbjct: 323 LRLRPPIMIMMRMARTPQTVAG--YTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ 380
Query: 358 ENSASIIPGSYSPFGDGPRICI 379
+N AS +Y PFG G CI
Sbjct: 381 DNPASGEKFAYVPFGAGRHRCI 402
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 219 ENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGK 278
++ +LS ++ I + AG E L H+P ++ K+ +EI Q S
Sbjct: 265 DSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTP 324
Query: 279 ITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALH 338
D ++ L+ + E LR+ P+A M+ + G + ++KG V + ALH
Sbjct: 325 TISDR-NRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIG-EFAVDKGTEVIINLWALH 382
Query: 339 TDPALWKDPETYNPDRFSEENSASIIPG--SYSPFGDGPRICI 379
+ W P+ + P+RF +I SY PFG GPR CI
Sbjct: 383 HNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCI 425
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG-----GKITYDSLK 285
++ + + G E L HHP+IQ ++++E+ RE G ++TY
Sbjct: 283 SVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD---RELGPGASCSRVTYKDRA 339
Query: 286 KMKFLDQVLSETLRIYPLANMIF-RECMEEYNIPGTDHVIEKGVFVQLPTL-ALHTDPAL 343
++ L+ ++E LR+ P+ + +I G D I +G+ V +P L H D +
Sbjct: 340 RLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYD--IPEGMVV-IPNLQGAHLDETV 396
Query: 344 WKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
W+ P + PDRF E + S FG G R+C+
Sbjct: 397 WEQPHEFRPDRFLEPGANP----SALAFGCGARVCL 428
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 230 SNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKF 289
+NI M+ G +E+A ++Q+ +R+E+ R++ G I+ L+ +
Sbjct: 279 ANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS-KMLQMVPL 337
Query: 290 LDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPET 349
L + ETLR++P++ + R E ++ D++I VQ+ A+ DPA + P+
Sbjct: 338 LKASIKETLRLHPISVTLQR--YPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDK 395
Query: 350 YNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P R+ ++ +I FG G R C+
Sbjct: 396 FDPTRWLSKDK-DLIHFRNLGFGWGVRQCV 424
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 253 ELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECM 312
ELA +PD+Q +R+E S + + ++ L L ETLR+YP+ +F E +
Sbjct: 303 ELARNPDVQQILRQE-SLAAAASISEHPQKATTELPLLRAALKETLRLYPVG--LFLERV 359
Query: 313 EEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGS----- 367
++ ++ I G VQ+ +L + AL+ PE YNP R+ + I GS
Sbjct: 360 VSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLD------IRGSGRNFH 413
Query: 368 YSPFGDGPRICI 379
+ PFG G R C+
Sbjct: 414 HVPFGFGMRQCL 425
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 147/385 (38%), Gaps = 25/385 (6%)
Query: 7 FGILIGTYPALLIKDPGLIMRILVKDFRYFYDRG-FHVSDSDVLGTNLFFLRNPKWKLLR 65
F + +G P +++ I LV F RG + D G + F +WK+LR
Sbjct: 47 FTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRWKVLR 106
Query: 66 NKTVSVFSSAKL-KSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMTDIVCKAI 124
+V+ + K S + +Q++ + LI+ L ++ PT L +I+C +
Sbjct: 107 RFSVTTMRDFGMGKRSVEERIQEE-AQCLIEELRKSKGALMDPTF-LFQSITANIICSIV 164
Query: 125 CGLEIHSIKNPSREHVAMQNMAFA--SSFRGFARNTINFFSPYLAKKVHIFPRILHTYFD 182
G H +E + M N+ + S FS +L FP +
Sbjct: 165 FGKRFHY---QDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKH----FPGAHRQVYK 217
Query: 183 DLT------WKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAENRVLSRELFVSNIFIMI 236
+L ++E +E + + S + N +
Sbjct: 218 NLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLF 277
Query: 237 LAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSE 296
AG E + +P + ++V +EI+QV +D KM + + V+ E
Sbjct: 278 FAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDR-AKMPYTEAVIYE 336
Query: 297 TLRIYPLANMIFRECMEEYNIPGTDHVIEKG--VFVQLPTLALHTDPALWKDPETYNPDR 354
R L M + ++ ++I K VF+ L T ALH DP ++ P+ +NPD
Sbjct: 337 IQRFSDLLPMGVPHIVTQHT-SFRGYIIPKDTEVFLILST-ALH-DPHYFEKPDAFNPDH 393
Query: 355 FSEENSASIIPGSYSPFGDGPRICI 379
F + N A ++ PF G RIC+
Sbjct: 394 FLDANGALKKTEAFIPFSLGKRICL 418
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
+S E +N+ M+ G + +E+A + +QD +R E+ ++ G +
Sbjct: 268 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMA-T 326
Query: 283 SLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPA 342
L+ + L + ETLR++P++ + R + + + D++I VQ+ AL +P
Sbjct: 327 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGREPT 384
Query: 343 LWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ DPE ++P R+ ++ +I FG G R C+
Sbjct: 385 FFFDPENFDPTRWLSKDK-NITYFRNLGFGWGVRQCL 420
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
+S E +N+ M+ G + +E+A + +QD +R E+ ++ G +
Sbjct: 271 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMA-T 329
Query: 283 SLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPA 342
L+ + L + ETLR++P++ + R + + + D++I VQ+ AL +P
Sbjct: 330 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVL--RDYMIPAKTLVQVAIYALGREPT 387
Query: 343 LWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ DPE ++P R+ ++ +I FG G R C+
Sbjct: 388 FFFDPENFDPTRWLSKDK-NITYFRNLGFGWGVRQCL 423
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 229 VSNIFI-MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
++ +FI M+ AG+ EL H D V E+ ++ + G +++ +L+++
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD-GRSVSFHALRQI 304
Query: 288 KFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP 347
L+ VL ETLR++P ++ R E+ + G H I +G V + P + DP
Sbjct: 305 PQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 348 ETYNPDRFSEENSASIIPG-SYSPFGDGPRICI 379
+ P R+ + ++ ++ PFG G C+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 229 VSNIFI-MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
++ +FI M+ AG+ EL H D V E+ ++ + G +++ +L+++
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD-GRSVSFHALRQI 304
Query: 288 KFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP 347
L+ VL ETLR++P ++ R E+ + G H I +G V + P + DP
Sbjct: 305 PQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 348 ETYNPDRFSEENSASIIPG-SYSPFGDGPRICI 379
+ P R+ + ++ ++ PFG G C+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 229 VSNIFI-MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
++ +FI M+ AG+ EL H D V E+ ++ + G +++ +L+++
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD-GRSVSFHALRQI 304
Query: 288 KFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP 347
L+ VL ETLR++P ++ R E+ + G H I +G V + P + DP
Sbjct: 305 PQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 348 ETYNPDRFSEENSASIIPG-SYSPFGDGPRICI 379
+ P R+ + ++ ++ PFG G C+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 229 VSNIFI-MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
++ +FI M+ AG+ EL H D V E+ ++ + G +++ +L+++
Sbjct: 246 ITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD-GRSVSFHALRQI 304
Query: 288 KFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP 347
L+ VL ETLR++P ++ R E+ + G H I +G V + P + DP
Sbjct: 305 PQLENVLKETLRLHPPLIILMRVAKGEFEVQG--HRIHEGDLVAASPAISNRIPEDFPDP 362
Query: 348 ETYNPDRFSEENSASIIPG-SYSPFGDGPRICI 379
+ P R+ + ++ ++ PFG G C+
Sbjct: 363 HDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
LS++ + + + LA E + L+ +P Q ++ +E++ V ++ D
Sbjct: 279 LSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED 338
Query: 283 SLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPA 342
L+ M +L L E++R+ P R +++ + G ++ + KG + L T L +
Sbjct: 339 -LRNMPYLKACLKESMRLTPSVPFTTR-TLDKPTVLG-EYALPKGTVLTLNTQVLGSSED 395
Query: 343 LWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++D + P+R+ ++ I P ++ PFG G R+CI
Sbjct: 396 NFEDSHKFRPERWLQKEK-KINPFAHLPFGIGKRMCI 431
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 253 ELAHHPDIQDKVRKEIKQVTRESGGKITYDS---------LKKMKFLDQVLSETLRIYPL 303
++ +P+ +E+K+ +G K++ + L + LD ++ E+LR+
Sbjct: 283 QMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS- 341
Query: 304 ANMIFRECMEEYNIPGTD--HVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSA 361
A++ R E++ + D + I K + L +H DP ++ DP T+ DR+ +EN
Sbjct: 342 ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK 401
Query: 362 S---------IIPGSYSPFGDGPRIC 378
+ + Y PFG G IC
Sbjct: 402 TKTTFYCNGLKLKYYYMPFGSGATIC 427
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 253 ELAHHPDIQDKVRKEIKQVTRESGGKITYDS---------LKKMKFLDQVLSETLRIYPL 303
++ +P+ +E+K+ +G K++ + L + LD ++ E+LR+
Sbjct: 283 QMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS- 341
Query: 304 ANMIFRECMEEYNIPGTD--HVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSA 361
A++ R E++ + D + I K + L +H DP ++ DP T+ DR+ +EN
Sbjct: 342 ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGK 401
Query: 362 S---------IIPGSYSPFGDGPRIC 378
+ + Y PFG G IC
Sbjct: 402 TKTTFYCNGLKLKYYYMPFGSGATIC 427
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 224 SRELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
S E N+ + +L AG E + +P + ++V+KEI+QV S
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-GSHRPP 319
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT--------DHVIEKGVFVQ 331
D KM + D V+ E R L ++I + +P T +VI K V
Sbjct: 320 ALDDRAKMPYTDAVIHEIQR---LGDLI------PFGVPHTVTKDTQFRGYVIPKNTEV- 369
Query: 332 LPTL--ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
P L ALH DP ++ P T+NP F + N A + PF G RIC+
Sbjct: 370 FPVLSSALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICL 418
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 228 FVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
+ + + AG E + +P + ++V+KEI+QV S D KM
Sbjct: 269 LILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-GSHRPPALDDRAKM 327
Query: 288 KFLDQVLSETLRIYPLANMIFRECMEEYNIPGT--------DHVIEKGVFVQLPTL--AL 337
+ D V+ E R L ++I + +P T +VI K V P L AL
Sbjct: 328 PYTDAVIHEIQR---LGDLI------PFGVPHTVTKDTQFRGYVIPKNTEV-FPVLSSAL 377
Query: 338 HTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
H DP ++ P T+NP F + N A + PF G RIC+
Sbjct: 378 H-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICL 418
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 224 SRELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
S E N+ + +L AG E + +P + ++V+KEI+QV S
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-GSHRPP 319
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT--------DHVIEKGVFVQ 331
D KM + D V+ E R L ++I + +P T +VI K V
Sbjct: 320 ALDDRAKMPYTDAVIHEIQR---LGDLI------PFGVPHTVTKDTQFRGYVIPKNTEV- 369
Query: 332 LPTL--ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
P L ALH DP ++ P T+NP F + N A + PF G RIC+
Sbjct: 370 FPVLSSALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICL 418
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 224 SRELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
S E N+ + +L AG E + +P + ++V+KEI+QV S
Sbjct: 261 SSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-GSHRPP 319
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT--------DHVIEKGVFVQ 331
D KM + D V+ E R L ++I + +P T +VI K V
Sbjct: 320 ALDDRAKMPYTDAVIHEIQR---LGDLI------PFGVPHTVTKDTQFRGYVIPKNTEV- 369
Query: 332 LPTL--ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
P L ALH DP ++ P T+NP F + N A + PF G RIC+
Sbjct: 370 FPVLSSALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICL 418
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 26/169 (15%)
Query: 224 SRELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
S E N+ + +L AG E + +P + ++V+KEI+QV S
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI-GSHRPP 319
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT--------DHVIEKGVFVQ 331
D KM + D V+ E R L ++I + +P T +VI K V
Sbjct: 320 ALDDRAKMPYTDAVIHEIQR---LGDLI------PFGVPHTVTKDTQFRGYVIPKNTEV- 369
Query: 332 LPTL--ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
P L ALH DP ++ P T+NP F + N A + PF G RIC
Sbjct: 370 FPVLSSALH-DPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRIC 417
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 29/159 (18%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L RE +S +++AG+E L+H PD Q +V + +
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------- 255
Query: 283 SLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLP--TLALHTD 340
E LR+YP A ++ R +E + G D + V P T LH
Sbjct: 256 ---------AAFQEALRLYPPAWILTRR-LERPLLLGEDRLPPGTTLVLSPYVTQRLH-- 303
Query: 341 PALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ D E + P+RF EE G Y PFG G R+C+
Sbjct: 304 ---FPDGEAFRPERFLEERGTPS--GRYFPFGLGQRLCL 337
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 153/404 (37%), Gaps = 59/404 (14%)
Query: 7 FGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLG-----TNLFFLR-NPK 60
F + + P +++ + LV DR V + +LG +F R P
Sbjct: 47 FSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQGVFLARYGPA 105
Query: 61 WKLLRNKTVSVFSSAKL-KSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMTDI 119
W+ R +VS + L K S + V ++ + + N + + + L+ A++++
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSG--RPFRPNGLLDKAVSNV 163
Query: 120 VCKAICG--LEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFS-----PYLAKKVHI 172
+ CG E + +A + + S GF R +N P LA KV
Sbjct: 164 IASLTCGRRFEYDDPRFLRLLDLAQEGLKEES---GFLREVLNAVPVDRHIPALAGKVLR 220
Query: 173 FPRILHTYFDDL------TWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAEN-RVLSR 225
F + T D+L TW + +++ + EN R++
Sbjct: 221 FQKAFLTQLDELLTEHRMTWDPAQ--PPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 226 ELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEI----KQVTRESGGKITY 281
+LF AG + HPD+Q +V++EI QV R G +
Sbjct: 279 DLFS--------AGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAH 330
Query: 282 DSLKKMKFLDQVLSETLR---IYPLA--NMIFREC-MEEYNIPGTDHVIEKGVFVQLPTL 335
M + V+ E R I PL +M R+ ++ + IP KG +
Sbjct: 331 -----MPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIP-------KGTTLITNLS 378
Query: 336 ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++ D A+W+ P ++P+ F + + P ++ PF G R C+
Sbjct: 379 SVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACL 422
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 153/404 (37%), Gaps = 59/404 (14%)
Query: 7 FGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLG-----TNLFFLR-NPK 60
F + + P +++ + LV DR V + +LG +F R P
Sbjct: 47 FSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQGVFLARYGPA 105
Query: 61 WKLLRNKTVSVFSSAKL-KSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMTDI 119
W+ R +VS + L K S + V ++ + + N + + + L+ A++++
Sbjct: 106 WREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSG--RPFRPNGLLDKAVSNV 163
Query: 120 VCKAICG--LEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFS-----PYLAKKVHI 172
+ CG E + +A + + S GF R +N P LA KV
Sbjct: 164 IASLTCGRRFEYDDPRFLRLLDLAQEGLKEES---GFLREVLNAVPVLLHIPALAGKVLR 220
Query: 173 FPRILHTYFDDL------TWKTIEMRKEKNIRRSDXXXXXXXXXXXXXXXPAEN-RVLSR 225
F + T D+L TW + +++ + EN R++
Sbjct: 221 FQKAFLTQLDELLTEHRMTWDPAQ--PPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 226 ELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEI----KQVTRESGGKITY 281
+LF AG + HPD+Q +V++EI QV R G +
Sbjct: 279 DLFS--------AGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAH 330
Query: 282 DSLKKMKFLDQVLSETLR---IYPLA--NMIFREC-MEEYNIPGTDHVIEKGVFVQLPTL 335
M + V+ E R I PL +M R+ ++ + IP KG +
Sbjct: 331 -----MPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIP-------KGTTLITNLS 378
Query: 336 ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++ D A+W+ P ++P+ F + + P ++ PF G R C+
Sbjct: 379 SVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACL 422
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 235 MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVL 294
+ AG E L +P+I++K+ +EI +V S D ++M ++D V+
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR-QEMPYMDAVV 333
Query: 295 SETLRIYPLA-NMIFRECMEEYNIPGTDHVIEKGVFVQLPTL-ALHTDPALWKDPETYNP 352
E R L + + E + G ++I KG V +PTL ++ D + DPE + P
Sbjct: 334 HEIQRFITLVPSNLPHEATRDTIFRG--YLIPKGTVV-VPTLDSVLYDNQEFPDPEKFKP 390
Query: 353 DRFSEENSASIIPGSYSPFGDGPRIC 378
+ F EN + PF G R+C
Sbjct: 391 EHFLNENGKFKYSDYFKPFSTGKRVC 416
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L RE +S +++AG+E L+H PD Q +V + +
Sbjct: 206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL---------- 255
Query: 283 SLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPA 342
E LR+YP A ++ R +E + G D + + V P + T
Sbjct: 256 ---------AAFQEALRLYPPAWILTRR-LERPLLLGEDRLPQGTTLVLSPYV---TQRL 302
Query: 343 LWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ + E + P+RF E G Y PFG G R+C+
Sbjct: 303 YFPEGEAFQPERFLAERGTPS--GRYFPFGLGQRLCL 337
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 226 ELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
E ++ N+ + L AG E L HP+++ KV +EI +V ++ + +
Sbjct: 263 EFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR-QPKF 321
Query: 282 DSLKKMKFLDQVLSETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTD 340
+ KM +++ V+ E R + M + R ++ D + KG V ++ D
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF--RDFFLPKGTEVYPMLGSVLRD 379
Query: 341 PALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
P+ + +P+ +NP F E ++ PF G R C
Sbjct: 380 PSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 267 EIKQVTRESGGKITYDS-LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIE 325
++ Q E ++ YD+ +++M F +Q E++R P M+ R+ ++ + +V+
Sbjct: 290 KLHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQV--GKYVVP 347
Query: 326 KGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+G + L H D + +P +NP+R + ++ G++ FG G CI
Sbjct: 348 EGDIIACSPLLSHQDEEAFPNPREWNPER-----NMKLVDGAFCGFGAGVHKCI 396
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 219 ENRVLSRELFVSNIFI----MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRE 274
E + + E ++ N+ + + + G E L HP+++ KV +EI +V +
Sbjct: 256 EEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK 315
Query: 275 SGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPT 334
+ + ++ KM +++ V+ E R + M +++ + D + KG V
Sbjct: 316 NR-QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK-DTKFRDFFLPKGTEVYPML 373
Query: 335 LALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++ DP+ + +P+ +NP F E ++ PF G R C
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 219 ENRVLSRELFVSNIFI----MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRE 274
E + + E ++ N+ + + + G E L HP+++ KV +EI +V +
Sbjct: 256 EEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK 315
Query: 275 SGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPT 334
+ + ++ KM +++ V+ E R + M +++ + D + KG V
Sbjct: 316 NR-QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK-DTKFRDFFLPKGTEVYPML 373
Query: 335 LALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++ DP+ + +P+ +NP F E ++ PF G R C
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 226 ELFVSNIFI----MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
E ++ N+ + + + G E L HP+++ KV +EI +V ++ + +
Sbjct: 263 EFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR-QPKF 321
Query: 282 DSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
+ KM +++ V+ E R + M +++ + D + KG V ++ DP
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK-DTKFRDFFLPKGTEVYPMLGSVLRDP 380
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ + +P+ +NP F E ++ PF G R C
Sbjct: 381 SFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 226 ELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
E ++ N+ + L G E L HP+++ KV +EI +V ++ + +
Sbjct: 263 EFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR-QPKF 321
Query: 282 DSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
+ KM +++ V+ E R + M +++ + D + KG V ++ DP
Sbjct: 322 EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKK-DTKFRDFFLPKGTEVYPMLGSVLRDP 380
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ + +P+ +NP F E ++ PF G R C
Sbjct: 381 SFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCF 418
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P+E + S E ++F AG E L HP++ KV++EI++V +
Sbjct: 262 PSEFTIESLENTAVDLF---GAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR 318
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
D M + D V+ E R L + +I +++I KG + + +
Sbjct: 319 SPCMQDR-SHMPYTDAVVHEVQRYIDLLPTSLPHAVT-CDIKFRNYLIPKGTTILISLTS 376
Query: 337 LHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ D + +PE ++P F +E + PF G RIC+
Sbjct: 377 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICV 419
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Query: 217 PAENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESG 276
P+E + S E ++F AG E L HP++ KV++EI++V +
Sbjct: 260 PSEFTIESLENTAVDLF---GAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR 316
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA 336
D M + D V+ E R L + +I +++I KG + + +
Sbjct: 317 SPCMQDR-SHMPYTDAVVHEVQRYIDLLPTSLPHAVT-CDIKFRNYLIPKGTTILISLTS 374
Query: 337 LHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ D + +PE ++P F +E + PF G RIC+
Sbjct: 375 VLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICV 417
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 226 ELFVSNIFI----MILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITY 281
E + N+ I ++ AG E L HP++ KV++EI++V +
Sbjct: 264 EFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQ 323
Query: 282 DSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
D M + D V+ E R L + ++ +++I KG + ++ D
Sbjct: 324 DR-GHMPYTDAVVHEVQRYIDLIPTSLPHAVT-CDVKFRNYLIPKGTTILTSLTSVLHDN 381
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ +PE ++P F +E + PF G RIC+
Sbjct: 382 KEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICV 419
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 218 AENRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVT-RESG 276
A ++ +E V+ + + AG++ L P+IQ K++KE+ V RE
Sbjct: 273 ASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR 332
Query: 277 GKITYDSLKKMKFLDQVLSETLRIYP-LANMIFRECMEEYNIPGTDHVIEKGVFVQLPTL 335
+++ ++ +L+ + ET R L I + + G I K V +
Sbjct: 333 PRLS--DRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNG--FYIPKKCCVFVNQW 388
Query: 336 ALHTDPALWKDPETYNPDRFSEENSASI---IPGSYSPFGDGPRICI 379
++ DP LW+DP + P+RF + +I + FG G R CI
Sbjct: 389 QVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCI 435
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 262 DKVRKEIKQVTRESGGKITYDS-LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT 320
DK+ KEI E ++ YD+ + +M F ++ + E++R P M+ R E +
Sbjct: 303 DKLHKEID----EFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV--G 356
Query: 321 DHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+V+ KG + L H D + +P ++P+R + + G++ FG G CI
Sbjct: 357 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEK------VDGAFIGFGAGVHKCI 409
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 262 DKVRKEIKQVTRESGGKITYDS-LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT 320
DK+ KEI E ++ YD+ + +M F ++ + E++R P M+ R E +
Sbjct: 288 DKLHKEID----EFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV--G 341
Query: 321 DHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+V+ KG + L H D + +P ++P+R + + G++ FG G CI
Sbjct: 342 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEK------VDGAFIGFGAGVHKCI 394
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 262 DKVRKEIKQVTRESGGKITYDS-LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGT 320
DK+ KEI E ++ YD+ + +M F ++ + E++R P M+ R E +
Sbjct: 294 DKLHKEID----EFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV--G 347
Query: 321 DHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+V+ KG + L H D + +P ++P+R + + G++ FG G CI
Sbjct: 348 SYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEK------VDGAFIGFGAGVHKCI 400
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 326
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 327 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 384
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 385 RWDPERDEK------VEGAFIGFGAGVHKCI 409
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 257 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 312
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 313 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 370
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 371 RWDPERDEK------VEGAFIGFGAGVHKCI 395
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 259 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 314
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 315 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 372
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 373 RWDPERDEK------VEGAFIGFGAGVHKCI 397
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 326
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 327 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 384
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 385 RWDPERDEK------VEGAFIGFGAGVHKCI 409
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 313
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 314 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 371
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 372 RWDPERDEK------VEGAFIGFGAGVHKCI 396
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Query: 219 ENRVLSRELFVSNIFIMIL----AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRE 274
E + + E ++ N+ + L AG E L HP+++ KV +EI +V +
Sbjct: 256 EEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK 315
Query: 275 SGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPT 334
+ + ++ KM + + V+ E R + M + + + D + KG V P
Sbjct: 316 NR-QPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNK-DTKFRDFFLPKGTEV-FPM 372
Query: 335 L-ALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
L ++ DP + +P +NP F ++ ++ PF G R C
Sbjct: 373 LGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCF 418
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQ--DKVRKEIKQVTRESGGKITYDS-LKKMK 288
I + AG L H +++ + +RKEI+ E ++ Y++ + +M
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIE----EFPAQLNYNNVMDEMP 313
Query: 289 FLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
F ++ E++R P M+ R+ M + + +V+ KG + L H D + +P
Sbjct: 314 FAERCARESIRRDPPLLMLMRKVMADVKV--GSYVVPKGDIIACSPLLSHHDEEAFPEPR 371
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
++P+R + + G++ FG G CI
Sbjct: 372 RWDPERDEK------VEGAFIGFGAGVHKCI 396
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 257 HPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYN 316
H + +++R IK G +T +++++M V+ E+LRI P + + +
Sbjct: 300 HTQLAEEIRGAIKSY---GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFT 356
Query: 317 IPGTDHVIE--KGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYSPFGDG 374
I D E KG + DP ++ PE Y PDRF + A + Y + +G
Sbjct: 357 IESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALL---KYVWWSNG 413
Query: 375 PR 376
P
Sbjct: 414 PE 415
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 292 QVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYN 351
+ + E LR P R E+ I D VI++G V++ + + D ++KDP+++
Sbjct: 242 KAVEEALRFSPPVMRTIRVTKEKVKI--RDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 352 PDRFSEENSASIIPGSYSPFGDGPRICI 379
PDR P + FG G +C+
Sbjct: 300 PDR---------TPNPHLSFGSGIHLCL 318
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 4/154 (2%)
Query: 226 ELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLK 285
E V + + +AG E L HP++ KV++EI V D
Sbjct: 267 ENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-S 325
Query: 286 KMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQ-LPTLALHTDPALW 344
M + D V+ E R L + + +++I KG + L T LH D +
Sbjct: 326 HMPYTDAVVHEIQRYSDLVPTGVPHAVTT-DTKFRNYLIPKGTTIMALLTSVLHDDKE-F 383
Query: 345 KDPETYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
+P ++P F ++N + PF G RIC
Sbjct: 384 PNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRIC 417
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 260 IQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPG 319
+ +++ +EI+ V + +GG++T +++KM+ V+ E LR P + ++ I
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIES 376
Query: 320 TDHV--IEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASII 364
D ++ G + DP ++ + + P+RF E ++
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLL 423
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 260 IQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPG 319
+ +++ +EI+ V + +GG++T +++KM+ V+ E LR P + ++ I
Sbjct: 317 VHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIES 376
Query: 320 TDHV--IEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASII 364
D ++ G + DP ++ + + P+RF E ++
Sbjct: 377 HDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLL 423
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 257 HPDIQDKVRKEIKQVTRESGGKITYDS------LKKMKFLDQVLSETLRIYPLANMIFRE 310
+P+ VR E++ + ++ ++ + L LD VLSE+LR+ A I RE
Sbjct: 292 NPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITRE 350
Query: 311 CMEEYNIP---GTDHVIEKG-VFVQLPTLALHTDPALWKDPETYNPDRF 355
+ + +P G + + +G + P L+ DP ++ DPE + +RF
Sbjct: 351 VVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRF 399
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 238 AGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSET 297
AG E L HP++ +V++EI++V D +M + D V+ E
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEI 334
Query: 298 LR---IYP--LANMIFREC-MEEYNIP-GTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
R + P L + + R+ Y IP GTD + T LH + A + +P+ +
Sbjct: 335 QRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSL-------TSVLHDEKA-FPNPKVF 386
Query: 351 NPDRFSEENSASIIPGSYSPFGDGPRICI 379
+P F +E+ + PF G R+C+
Sbjct: 387 DPGHFLDESGNFKKSDYFMPFSAGKRMCV 415
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 258 PDIQDKVRKEIKQVTRESGGKITYDS------LKKMKFLDQVLSETLRIYPLANMIFREC 311
P+ VR E++ + ++ ++ + L LD VLSE+LR+ A I RE
Sbjct: 281 PEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREV 339
Query: 312 MEEYNIP---GTDHVIEKG-VFVQLPTLALHTDPALWKDPETYNPDRF 355
+ + +P G + + +G + P L+ DP ++ DPE + +RF
Sbjct: 340 VVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRF 387
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 293 VLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNP 352
V+ ET+R P ++ R ++ I GT H + KG + L A H DP + P+ ++P
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTI-GT-HTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 353 DRFSEENSASIIPGSYSPFGDGPRICI 379
DR A I + FG G C+
Sbjct: 350 DR------AQI---RHLGFGKGAHFCL 367
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 254 LAHHPDIQDKVRKEIKQVTRESGGK--ITYDSLKKMKFLDQVLSETLRIYPLANMIFREC 311
L HP+ VR+EI+ GGK + K D VL ETLR+ A +I R+
Sbjct: 280 LLTHPEALRAVREEIQ------GGKHLRLEERQKNTPVFDSVLWETLRLTAAA-LITRDV 332
Query: 312 MEEYNI---PGTDHVIEKG-VFVQLPTLALHTDPALWKDPETYNPDRF 355
++ I G ++ + +G P ++ DP + + PE + DRF
Sbjct: 333 TQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRF 380
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 31/153 (20%)
Query: 228 FVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKM 287
VS F+++ AG+E L HP E V + + G+
Sbjct: 235 LVSLAFLLLTAGHETTANMISLGVVGLLSHP--------EQLTVVKANPGRTPM------ 280
Query: 288 KFLDQVLSETLRIYPLANMIF-RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKD 346
+ E LR + +A+ + R E+ I G +GV V + L+ + DPA++KD
Sbjct: 281 -----AVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSM--LSANWDPAVFKD 333
Query: 347 PETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
P + +R + + A FG GP C+
Sbjct: 334 PAVLDVERGARHHLA---------FGFGPHQCL 357
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 325
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 326 WADPQEFRPERFRAWDEDSFNFIP 349
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 6/163 (3%)
Query: 220 NRVLSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKI 279
N LS E ++ + + AG++ L +P +Q K+++E+ V S
Sbjct: 272 NVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPR 331
Query: 280 TYDSLKKMKFLDQVLSETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALH 338
D + +++ + ET R I + ++ G I KG V + ++
Sbjct: 332 LSDR-SHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKG--FYIPKGRCVFVNQWQIN 388
Query: 339 TDPALWKDPETYNPDRFSEENSA--SIIPGSYSPFGDGPRICI 379
D LW +P + P+RF + A ++ FG G R CI
Sbjct: 389 HDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCI 431
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 291 DQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
+ + E R YP F + + + + +KG V L + DP LW P+ +
Sbjct: 277 EMFVQEVRRYYPFGP--FLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEF 334
Query: 351 NPDRFS--EENSASIIP 365
P+RF+ EEN +IP
Sbjct: 335 RPERFAEREENLFDMIP 351
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 325
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 326 WADPQEFRPERFRAWDEDSFNFIP 349
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 317
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 318 WADPQEFRPERFRAWDEDSFNFIP 341
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 317
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 318 WADPQEFRPERFRAWDEDSFNFIP 341
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 317
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 318 WADPQEFRPERFRAWDEDSFNFIP 341
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 284 LKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPAL 343
+++ + + + E R YP + +++ G +G V L + D A
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGM--AFPEGRQVVLDLYGSNHDAAT 325
Query: 344 WKDPETYNPDRFS--EENSASIIP 365
W DP+ + P+RF +E+S + IP
Sbjct: 326 WADPQEFRPERFRAWDEDSFNFIP 349
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 290 LDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPET 349
+D V+ E LR A + R + I G D V LP A + DPA + DP+T
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLP--AANRDPAEFDDPDT 344
Query: 350 YNPDRFSEENSASIIPGSYSPFGDGPRICIVS 381
+ P R P + FG G C+ S
Sbjct: 345 FLPGRK---------PNRHITFGHGMHHCLGS 367
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 292 QVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYN 351
+ + E LR P R+ E + D IE+G +V++ + + D ++ D E +
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 352 PDRFSEENSASIIPGSYSPFGDGPRICI 379
PDR P + FG G +C+
Sbjct: 300 PDRN---------PNPHLSFGSGIHLCL 318
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 292 QVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYN 351
+ + E LR P R+ E + D IE+G +V++ + + D ++ D E +
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERVKL--GDQTIEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 352 PDRFSEENSASIIPGSYSPFGDGPRICI 379
PDR P + FG G +C+
Sbjct: 300 PDRN---------PNPHLSFGSGIHLCL 318
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 30/158 (18%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
LS E + +MI AGYE H L PD VRK G++T+
Sbjct: 227 LSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRK----------GEVTWA 276
Query: 283 SLKKMKFLDQVLSETLRIYP-LANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
V+ ETLR P + ++ R + + +P I +G + A + P
Sbjct: 277 D---------VVEETLRHEPAVKHLPLRYAVTDIALP-DGRTIARGEPILASYAAANRHP 326
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+D +T++ R +E+ A FG G C+
Sbjct: 327 DWHEDADTFDATRTVKEHLA---------FGHGVHFCL 355
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 257 HPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYN 316
+PD+Q +V+ E+ QV D + ++ L E +R + N
Sbjct: 309 YPDVQTRVQAELDQVVGRDRLPCMGDQ-PNLPYVLAFLYEAMRFSSFVPVTIPHATTA-N 366
Query: 317 IPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENS 360
+ I K V + +++ DP W +PE ++P RF +++
Sbjct: 367 TSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDG 410
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 31/158 (19%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L+ E + I+++AG+E + L HPD +R +
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD--------------- 292
Query: 283 SLKKMKFLDQVLSETLRIY-PLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
M LD + E LR P+ + +R +E ++ GT VI G V + H P
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGT--VIPAGDTVLVVLADAHRTP 346
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ DP ++ R + + A FG G CI
Sbjct: 347 ERFPDPHRFDIRRDTAGHLA---------FGHGIHFCI 375
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 31/158 (19%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L+ E + I+++AG+E + L HPD +R +
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD--------------- 292
Query: 283 SLKKMKFLDQVLSETLRIY-PLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
M LD + E LR P+ + +R +E ++ GT VI G V + H P
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGT--VIPAGDTVLVVLADAHRTP 346
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ DP ++ R + + A FG G CI
Sbjct: 347 ERFPDPHRFDIRRDTAGHLA---------FGHGIHFCI 375
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 31/158 (19%)
Query: 223 LSRELFVSNIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L+ E + I+++AG+E + L HPD +R +
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRAD--------------- 292
Query: 283 SLKKMKFLDQVLSETLRIY-PLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
M LD + E LR P+ + +R +E ++ GT VI G V + H P
Sbjct: 293 ----MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGT--VIPAGDTVLVVLADAHRTP 346
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+ DP ++ R + + A FG G CI
Sbjct: 347 ERFPDPHRFDIRRDTAGHLA---------FGHGIHFCI 375
>pdb|2FZP|A Chain A, Crystal Structure Of The Usp8 Interaction Domain Of Human
Nrdp1
Length = 144
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 84 LVQDKCSDDLIDYLNENAHKKEWP-------TRQLMGDAMTDIVCKAICGLEIHSIKNPS 136
LV+ C +++ L ENAH++ WP TRQ+ + V K I G + +
Sbjct: 60 LVESGCPASIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACE 119
Query: 137 REHVA 141
+H+
Sbjct: 120 NQHMG 124
>pdb|2GWF|B Chain B, Structure Of A Usp8-Nrdp1 Complex
pdb|2GWF|D Chain D, Structure Of A Usp8-Nrdp1 Complex
pdb|2GWF|F Chain F, Structure Of A Usp8-Nrdp1 Complex
Length = 134
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 84 LVQDKCSDDLIDYLNENAHKKEWP-------TRQLMGDAMTDIVCKAICGLEIHSIKNPS 136
LV+ C +++ L ENAH++ WP TRQ+ + V K I G + +
Sbjct: 50 LVESGCPASIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACE 109
Query: 137 REHVA 141
+H+
Sbjct: 110 NQHMG 114
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLD 291
+ +++AGYE ++ A HPD K++ + +
Sbjct: 237 VATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK-------------------ENPELAP 277
Query: 292 QVLSETLRIYP-LANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
Q + E LR P L R E++ + G I G V + H DP ++ D + +
Sbjct: 278 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVR--IPTGTPVFMCAHVAHRDPRVFADADRF 335
Query: 351 NPDRFSEENSASIIPGSYSPFGDGPRICI 379
D + + SI FG GP C+
Sbjct: 336 --DITVKREAPSIA------FGGGPHFCL 356
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 232 IFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLD 291
+ +++AGYE ++ A HPD K++ + +
Sbjct: 247 VATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK-------------------ENPELAP 287
Query: 292 QVLSETLRIYP-LANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
Q + E LR P L R E++ + G I G V + H DP ++ D + +
Sbjct: 288 QAVEEVLRWSPTLPVTATRVAAEDFEVNGVR--IPTGTPVFMCAHVAHRDPRVFADADRF 345
Query: 351 NPDRFSEENSASIIPGSYSPFGDGPRICI 379
D + + SI FG GP C+
Sbjct: 346 --DITVKREAPSIA------FGGGPHFCL 366
>pdb|1ZOR|A Chain A, Isocitrate Dehydrogenase From The Hyperthermophile
Thermotoga Maritima
pdb|1ZOR|B Chain B, Isocitrate Dehydrogenase From The Hyperthermophile
Thermotoga Maritima
Length = 399
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 140 VAMQNMAFASSFRGFARNTINFFSPYLAKKVHIF-------PRILHTYFDDLTWKTIEMR 192
+AM N+ S R FA++ IN+ +++KV I+ ++ H YF D+ + ++ R
Sbjct: 176 MAMHNLE--KSIRSFAQSCINYA---ISEKVDIWFATKDTISKVYHAYFKDIFQEEVDKR 230
Query: 193 KEK 195
KE+
Sbjct: 231 KEE 233
>pdb|2OGB|A Chain A, Crystal Structure Of The C-Terminal Domain Of Mouse Nrdp1
pdb|2OGB|B Chain B, Crystal Structure Of The C-Terminal Domain Of Mouse Nrdp1
Length = 126
Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 84 LVQDKCSDDLIDYLNENAHKKEWP-------TRQLMGDAMTDIVCKAICG 126
LV+ C +++ L ENAH++ WP TRQ + V K I G
Sbjct: 42 LVESGCPASIVNELIENAHERSWPQGLATLETRQXNRRYYENYVAKRIPG 91
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)
Query: 231 NIFIMILAGYEXXXXXXXXXXHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
+ +++ G E H L P++ +++R E + R
Sbjct: 234 GLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPR----------------- 276
Query: 291 DQVLSETLRIYPLANMIF--RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
+ E LR P N + R +E+ I G I G V + LA + DP ++ D
Sbjct: 277 --AIDELLRWIPHRNAVGLSRIALEDVEIKGVR--IRAGDAVYVSYLAANRDPEVFPD-- 330
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
PDR E S P + FG GP C
Sbjct: 331 ---PDRIDFERS----PNPHVSFGFGPHYC 353
>pdb|2R4G|A Chain A, The High Resolution Structure Of The Rna-Binding Domain Of
Telomerase
Length = 267
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 24 LIMRILVKDFRYFYDRGFHVSDSDVLGTNLFFLRNPKWKLLRNKTV 69
+I +I++ RY F++++ G+ +F+ R P WKL+ T+
Sbjct: 211 IINKIVIPVLRY----NFYITEKHKEGSQIFYYRKPIWKLVSKLTI 252
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 296 ETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRF 355
E +R YP + R + + + G I KG V LP++ + DPA ++ PE DR
Sbjct: 273 ELMRRYPTVA-VSRNAVADVDADGV--TIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR- 328
Query: 356 SEENSASIIPGSYSPFGDGPRICI 379
+ P ++ G G C+
Sbjct: 329 ------GLAPIRHTTMGVGAHRCV 346
>pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With
5-F-Guloside
pdb|1QX1|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With
2-F-Mannosyl-F
pdb|3BUP|A Chain A, Golgi Alpha-Mannosidase Ii D341n Acid-Base Catalyst Mutant
With Bound Mannose
Length = 1045
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 49 LGTNLFFLRNPKWKLLRNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLN--ENAHKKEW 106
LG N F +N +W + R +F ++ F++ Q + D ++ E A + E+
Sbjct: 338 LGDNFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGTLQEYFDAVHQAERAGQAEF 397
Query: 107 PTRQLMGDAMT 117
PT L GD T
Sbjct: 398 PT--LSGDFFT 406
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,913,395
Number of Sequences: 62578
Number of extensions: 418844
Number of successful extensions: 1197
Number of sequences better than 100.0: 140
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1071
Number of HSP's gapped (non-prelim): 140
length of query: 382
length of database: 14,973,337
effective HSP length: 101
effective length of query: 281
effective length of database: 8,652,959
effective search space: 2431481479
effective search space used: 2431481479
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)