RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9975
(382 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 215 bits (551), Expect = 6e-66
Identities = 106/386 (27%), Positives = 177/386 (45%), Gaps = 24/386 (6%)
Query: 7 FGILIGTYPALLIKDPGLIMRILVKDFRYFYDRG----FHVSDSDVLGTNLFFLRNPKWK 62
F + +G P +++ P + +L+K F R F S LG + F P+W+
Sbjct: 37 FRLYLGPKPVVVLSGPEAVKEVLIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWR 96
Query: 63 LLRNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHKKEW-PTRQLMGDAMTDIVC 121
LR F+S S + + + DL++ L + A + L+ A +++C
Sbjct: 97 QLRRFLTPTFTSFGKLSFEPRVEE--EARDLVEKLRKTAGEPGVIDITDLLFRAALNVIC 154
Query: 122 KAICGLEIHSIKNP-SREHVAM--QNMAFASSFRGFARNTINFFSPYLAKKVHIFPRILH 178
+ G S+++P E V + + SS + + R
Sbjct: 155 SILFGERFGSLEDPKFLELVKAVQELSSLLSSPSPQLLDLFPILKYFPGPHGRKLKRA-R 213
Query: 179 TYFDDLTWKTIEMRKEK----NIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFI 234
DL K IE R+E D L LL + L+ E + +
Sbjct: 214 KKIKDLLDKLIEERRETLDSAKKSPRDFLDALLL-----AKEEEDGSKLTDEELRATVLE 268
Query: 235 MILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVL 294
+ AG +T+++T S L+ELA HP++Q+K+R+EI +V TYD L+ M +LD V+
Sbjct: 269 LFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDEV-IGDKRSPTYDDLQNMPYLDAVI 327
Query: 295 SETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPD 353
ETLR++P+ + + RE ++ IPG ++I KG V + ALH DP ++ +PE ++P+
Sbjct: 328 KETLRLHPVVPLLLPREVTKDTVIPG--YLIPKGTLVIVNLYALHRDPEVFPNPEEFDPE 385
Query: 354 RFSEENSASIIPGSYSPFGDGPRICI 379
RF +EN ++ PFG GPR C+
Sbjct: 386 RFLDENGKFRKSFAFLPFGAGPRNCL 411
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 121 bits (306), Expect = 5e-31
Identities = 80/370 (21%), Positives = 133/370 (35%), Gaps = 63/370 (17%)
Query: 15 PALLIKDPGLIMRILVKDFRYFYDRGFHVS----DSDVLGTN-LFFLRNPKWKLLRNKTV 69
++ P + +L R+F VLG L L P+ LR
Sbjct: 49 GFWVVSRPADVREVLRDP-RFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLA 107
Query: 70 SVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMTDIVCKAICGLEI 129
F+ L+ ++ + +D L+D L+ D ++ + I E+
Sbjct: 108 PAFTPRALRGYRPLIRE--IADRLLD-------DLWQGGADLVLDFAAELTLRVIA--EL 156
Query: 130 HSIKNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAKKVHIFPRILHTYFDDLTWKTI 189
+ R + S R + ++ R L Y L I
Sbjct: 157 LGVPLEDRPQL------LRWSDALLLRLDPDLGPEEPWRRARAARRELDAYLRAL----I 206
Query: 190 EMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGYETSTTTSSL 249
R+ R DLL LLL + LS + + +++AG+ET+ +
Sbjct: 207 AERRAAP--RDDLLSLLLSAED------DGGGRLSDDEIRDELITLLVAGHETTANALAW 258
Query: 250 TLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFR 309
L+ L HPD K+R E + L+ V+ ETLR+YP + R
Sbjct: 259 ALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEETLRLYPPVPLARR 301
Query: 310 ECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASIIPGSYS 369
E+ + G + I G V L A + DP ++ DP+ ++P+RF ++
Sbjct: 302 VATEDVELGG--YRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERF---------NNAHL 350
Query: 370 PFGDGPRICI 379
PFG GP C+
Sbjct: 351 PFGGGPHRCL 360
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 106 bits (266), Expect = 4e-25
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 16/210 (7%)
Query: 177 LHTYFDDLTWKTIEMRKE-KNIRRS-----DLLQLLLEVYEQEQMLPAENRVLSRELFVS 230
L + L + I+ R++ I RS DLL +LL E+++ + L+ +L +
Sbjct: 263 LKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKR---SNGFNLNLQLIMD 319
Query: 231 NIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
AG+ET+ + TL LA +P QDKVR E+ +V G + D L K+ L
Sbjct: 320 ECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVC--GGETPSVDHLSKLTLL 377
Query: 291 DQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALW-KDPET 349
+ V++E+LR+YP A ++ R E+ I D I KG+ + +P LA+H LW KD
Sbjct: 378 NMVINESLRLYPPATLLPRMAFED--IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANE 435
Query: 350 YNPDRFSEENSASIIPGSYSPFGDGPRICI 379
+NPDRF+ A + PF GPR CI
Sbjct: 436 FNPDRFAGRPFAP--GRHFIPFAAGPRNCI 463
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 94.4 bits (235), Expect = 4e-21
Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 20/194 (10%)
Query: 192 RKEKNI--RRSDLLQLLLEVYEQEQMLPAEN-RVLSRELFVSNIFIMIL-AGYETSTTTS 247
+++NI R+ D+L LLL+ + EN R L E + ++ +M L AG+E+S +
Sbjct: 256 SRKQNISPRKKDMLDLLLDAED-------ENGRKLDDEEII-DLLLMYLNAGHESSGHLT 307
Query: 248 SLTLHELAHHPDIQDKVRKEIKQVTR---ESGGKITYDSLKKMKFLDQVLSETLRIYPLA 304
L HP++ K + E +++ + +T ++KM++L QV+ ETLR+ ++
Sbjct: 308 MWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINIS 367
Query: 305 NMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASII 364
+FRE + + G + I KG V +H DP ++ +P+ ++P R+ + +
Sbjct: 368 LTVFREAKTDVEVNG--YTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRW-DNYTPK-- 422
Query: 365 PGSYSPFGDGPRIC 378
G++ PFG G R+C
Sbjct: 423 AGTFLPFGLGSRLC 436
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 91.3 bits (227), Expect = 4e-20
Identities = 92/394 (23%), Positives = 156/394 (39%), Gaps = 36/394 (9%)
Query: 5 KYFGIL---IGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSDVLGTN---LFFLRN 58
KY GI +++ DP LI + V +F F DR S GT +
Sbjct: 60 KYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK--IPSIKHGTFYHGIVTSSG 117
Query: 59 PKWKLLRNKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNE-NAHKKEWPTRQLMGDAMT 117
WK R LK +D+L D D LI+ + + + + + R +
Sbjct: 118 EYWKRNREIVGKAMRKTNLKHIYDLL--DDQVDVLIESMKKIESSGETFEPRYYLTKFTM 175
Query: 118 DIVCKAICGLEIHSIKNPSREHVA--MQNM--AFASSFRGFARNTINFFSP----YLAKK 169
+ K I +I ++ +A M M F G + I P YL
Sbjct: 176 SAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHT 235
Query: 170 VHIFPRILHTYFDDLTWKTIEMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFV 229
F +I + + + ++ + R DLL LL++ Y ++ +LS +
Sbjct: 236 DKNFKKIK-KFIKEKYHEHLKTIDPEVPR--DLLDLLIKEYGTN----TDDDILS---IL 285
Query: 230 SNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKF 289
+ I LAG +TS T+ + L ++P+IQ+K EIK K+ + +
Sbjct: 286 ATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN-GRNKVLLSDRQSTPY 344
Query: 290 LDQVLSETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPE 348
++ ETLR P++ + R + I G H I K + + +L + +++PE
Sbjct: 345 TVAIIKETLRYKPVSPFGLPRSTSNDIII-GGGHFIPKDAQILINYYSLGRNEKYFENPE 403
Query: 349 TYNPDRFSEENSASIIPGSYSPFGDGPRICIVSQ 382
++P RF +S ++ PF GPR C+ Q
Sbjct: 404 QFDPSRFLNPDS----NDAFMPFSIGPRNCVGQQ 433
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 90.2 bits (224), Expect = 8e-20
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 180 YFDDLTW---KTIEMR-KEKNIRRSDLLQLLLEVYEQEQ-------------MLPAENRV 222
+F L+W K+ E R + RR+ +++ L++ +Q++ L +E
Sbjct: 200 FFPYLSWIPNKSFETRVQTTEFRRTAVMKALIK--QQKKRIARGEERDCYLDFLLSEATH 257
Query: 223 LSRELFVSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYD 282
L+ E + ++ I+ +T+ T+ ++ELA +PD Q+++ +EI++V ++T +
Sbjct: 258 LTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC--GDERVTEE 315
Query: 283 SLKKMKFLDQVLSETLRIYPLANMI-FRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDP 341
L + +L+ V ETLR Y ++ R E+ + G D I G + + + D
Sbjct: 316 DLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYD--IPAGTQIAINIYGCNMDK 373
Query: 342 ALWKDPETYNPDRFSEENSASIIPGSYSPFGDGPRIC 378
W++PE ++P+RF E S FG G R+C
Sbjct: 374 KRWENPEEWDPERFLGEKYESADMYKTMAFGAGKRVC 410
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 90.3 bits (224), Expect = 1e-19
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 177 LHTYFDDLTWKTIEMRK----EKNIRRSDLLQLLLEVYEQEQMLPAENRVLSREL--FVS 230
LH FD + IE K + DLL LL + ++Q R+ E+ +
Sbjct: 244 LHRRFDAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLL 303
Query: 231 NIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFL 290
N+F AG +T+++T + EL HPDI K ++E+ V ++ L ++ +L
Sbjct: 304 NLFT---AGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR-DRLVSESDLPQLTYL 359
Query: 291 DQVLSETLRIYP-----LANMIFREC-MEEYNIPGTDHVIEKGVFVQLPTLALHTDPALW 344
V+ ET R++P L M EC + Y+IP KG + + A+ DP W
Sbjct: 360 QAVIKETFRLHPSTPLSLPRMAAEECEINGYHIP-------KGATLLVNVWAIARDPEQW 412
Query: 345 KDPETYNPDRF--SEENSASIIPGS---YSPFGDGPRIC 378
DP + PDRF E++ + GS PFG G RIC
Sbjct: 413 PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRIC 451
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 87.7 bits (217), Expect = 7e-19
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 184 LTWKTIEMRKEKNI---RRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGY 240
LT ++ RKE+ ++ D+L LL A + S E V + +++AGY
Sbjct: 231 LTLVVMKRRKEEEEGAEKKKDMLAALL----------ASDDGFSDEEIVDFLVALLVAGY 280
Query: 241 ETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESG--GKITYDSLKKMKFLDQVLSETL 298
ET++T +L + L P ++++E +++ + + K M F V++ETL
Sbjct: 281 ETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETL 340
Query: 299 RIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEE 358
R+ + IFR M + + G + I KG V A+H D +KD T+NP R+ +
Sbjct: 341 RVANIIGGIFRRAMTDIEVKG--YTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRW-QS 397
Query: 359 NSASIIPGS-YSPFGDGPRIC 378
NS + +P + ++PFG GPR+C
Sbjct: 398 NSGTTVPSNVFTPFGGGPRLC 418
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 86.1 bits (213), Expect = 3e-18
Identities = 95/409 (23%), Positives = 168/409 (41%), Gaps = 70/409 (17%)
Query: 7 FGILIGTYPALLIKDPGLIMRILVKDFRYFYDRGFHVSDSD-VLGTNLFFLRNPKWKLLR 65
F + G L++ DP + IL +D Y +G + V+G L W++ R
Sbjct: 168 FRLTFGPKSFLIVSDPSIAKHIL-RDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRR 226
Query: 66 NKTVSVFSSAKLKSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMT-DIVCKAI 124
V + + + Q SD L L+ A E + + +T DI+ KA+
Sbjct: 227 RAIVPALHQKYVAAMISLFGQ--ASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAV 284
Query: 125 CGLEIHSIKNPSREHVAMQNMAFASSFRGFARNTINFFSPYLAKKVHIFPRILHTYFDDL 184
+ S+ N + G + V P ++
Sbjct: 285 FNYDFDSLSNDT----------------GIVEAVYTVLREAEDRSVSPIP-----VWEIP 323
Query: 185 TWKTIEMRKEK--------NIRRSDLLQLLLEVYEQEQ------------------MLPA 218
WK I R+ K N DL+ + + E+E+ +L +
Sbjct: 324 IWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLAS 383
Query: 219 ENRVLSRELFVSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGK 278
+ V S++L ++ M++AG+ETS + T + L+ P + K+++E+ V G +
Sbjct: 384 GDDVSSKQL-RDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVL---GDR 439
Query: 279 I-TYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLAL 337
T + +KK+K+ +V++E+LR+YP ++ R +E + G + I++G + + L
Sbjct: 440 FPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGG--YPIKRGEDIFISVWNL 497
Query: 338 HTDPALWKDPETYNPDRF-------SEENSASIIPGSYSPFGDGPRICI 379
H P W D E +NP+R+ +E N SY PFG GPR C+
Sbjct: 498 HRSPKHWDDAEKFNPERWPLDGPNPNETNQNF----SYLPFGGGPRKCV 542
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 83.0 bits (205), Expect = 2e-17
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 223 LSRELFVSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKE---IKQVTRESG-GK 278
LS E + I ++ AG+ETS+ +L + L P ++R+E I + ++SG +
Sbjct: 275 LSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESE 334
Query: 279 ITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTL-AL 337
+ ++ KKM+F V++ETLR+ + + R+ +++ G D I G V LP + A+
Sbjct: 335 LNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYD--IPSGWKV-LPVIAAV 391
Query: 338 HTDPALWKDPETYNPDRFSEEN-------SASIIPGSYSPFGDGPRICIVSQ 382
H D +L+ P+ +NP R+ + N S+S ++ PFG GPR+C S+
Sbjct: 392 HLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSE 443
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 81.4 bits (201), Expect = 8e-17
Identities = 103/406 (25%), Positives = 177/406 (43%), Gaps = 66/406 (16%)
Query: 19 IKDPGLIMRILVKDFRYFYDRG--FHVSDSDVLGTNLFFLRNPKWKLLRNKTVSV-FSSA 75
I DP + +L +F Y +G +H +LG +F + W+ R KT S F+S
Sbjct: 80 IADPVNVEHVLKTNFAN-YPKGEVYHSYMEVLLGDGIFNVDGELWRKQR-KTASFEFASK 137
Query: 76 KLKSSFDILVQDKCSDDLIDYLNENAHKKEWPTRQLMGDAMT-DIVCKAICGLEIHSIKN 134
L+ F +V + S L L++ + + Q + MT D +CK G+EI ++
Sbjct: 138 NLRD-FSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLS- 195
Query: 135 PSREHVAMQNMAFASSFRGFARN---TINFFSPY--LAKKVHIFPRILHT----YFDDLT 185
PS + FA +F N T+ F P L K ++I L + DD T
Sbjct: 196 PS-----LPENPFAQAFD--TANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFT 248
Query: 186 WKTIEMRK--------EKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMIL 237
+ I RK + D+L +E+ E P N + + + ++
Sbjct: 249 YSVIRRRKAEMDEARKSGKKVKHDILSRFIELGED----PDSN--FTDKSLRDIVLNFVI 302
Query: 238 AGYETSTTTSSLTLHELAHHPDIQDKVRKEIK-------------------QVTRESGGK 278
AG +T+ TT S ++ + +P + +K+ E+K Q + G
Sbjct: 303 AGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGL 362
Query: 279 ITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIP-GTDHVIEKGVFVQLPTLAL 337
+TYDSL K+++L V++ETLR+YP + +E+ +P GT ++ G V ++
Sbjct: 363 LTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGT--KVKAGGMVTYVPYSM 420
Query: 338 HTDPALW-KDPETYNPDRFSEE---NSASIIPGSYSPFGDGPRICI 379
W D ++ P+R+ ++ +AS P ++ F GPRIC+
Sbjct: 421 GRMEYNWGPDAASFKPERWIKDGVFQNAS--PFKFTAFQAGPRICL 464
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 80.6 bits (199), Expect = 1e-16
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 187 KTIEMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGYETSTTT 246
+ I+ R+ +D+L L+ L + E + I ++ +GYET +TT
Sbjct: 231 QLIQERRASGETHTDMLGYLMRKEGNRYKL-------TDEEIIDQIITILYSGYETVSTT 283
Query: 247 SSLTLHELAHHPDIQDKVRKE---IKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPL 303
S + + L HP ++RKE I++ R I ++ K M+F V+ ET R+ +
Sbjct: 284 SMMAVKYLHDHPKALQELRKEHLAIRERKRPE-DPIDWNDYKSMRFTRAVIFETSRLATI 342
Query: 304 ANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEENSASI 363
N + R+ ++ + G +VI KG + + T ++ DP L+ DP T+NP R+ +++ S
Sbjct: 343 VNGVLRKTTQDMELNG--YVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLES- 399
Query: 364 IPGSYSPFGDGPRIC 378
+ FG G R+C
Sbjct: 400 -HNYFFLFGGGTRLC 413
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 76.5 bits (188), Expect = 3e-15
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 187 KTIEMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGYETSTTT 246
K + R++ +DLL + E L+ E NI +I A +T+ +
Sbjct: 234 KILSKRRQNGSSHNDLLGSFMGDKEG----------LTDEQIADNIIGVIFAARDTTASV 283
Query: 247 SSLTLHELAHHPDIQDKVRKEIKQVTR--ESGGKITYDSLKKMKFLDQVLSETLRIYPLA 304
+ L LA +P + + V +E + + E G +T++ KKM +V+ ETLR+ +
Sbjct: 284 LTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASIL 343
Query: 305 NMIFRECMEEYNIPGTDHVIEKGVFVQLPTLA-LHTDPALWKDPETYNPDRFSEENSASI 363
+ FRE +E+ G ++I KG V LP +H ++ DP ++P RF +
Sbjct: 344 SFTFREAVEDVEYEG--YLIPKGWKV-LPLFRNIHHSADIFSDPGKFDPSRF----EVAP 396
Query: 364 IPGSYSPFGDGPRIC 378
P ++ PFG+G C
Sbjct: 397 KPNTFMPFGNGTHSC 411
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 76.4 bits (188), Expect = 3e-15
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 235 MILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVL 294
M++AG+ET+ + + TL+ L+ +P+ K ++E+ +V G TY+ +K++K+L + +
Sbjct: 286 MLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVL--QGRPPTYEDIKELKYLTRCI 343
Query: 295 SETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDR 354
+E++R+YP ++ R E +PG + + G + + +H P +W+ E + P+R
Sbjct: 344 NESMRLYPHPPVLIRRAQVEDVLPG-GYKVNAGQDIMISVYNIHRSPEVWERAEEFVPER 402
Query: 355 FSEENSASIIPGS------YSPFGDGPRICIVSQ 382
F + +P Y PF GPR C+ Q
Sbjct: 403 FDLDGP---VPNETNTDFRYIPFSGGPRKCVGDQ 433
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 75.5 bits (186), Expect = 7e-15
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 229 VSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMK 288
V NI + A ET+ + + EL +HP+IQ K+R E+ V G ++T K+
Sbjct: 298 VENINV---AAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP-GNQVTEPDTHKLP 353
Query: 289 FLDQVLSETLRIY-PLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDP 347
+L V+ ETLR++ + ++ +E+ + G D E + V LA +P LWK+P
Sbjct: 354 YLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLA--NNPELWKNP 411
Query: 348 ETYNPDRFSEENSASIIPGS---YSPFGDGPRIC 378
E + P+RF EE + G+ + PFG G R C
Sbjct: 412 EEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSC 445
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 72.1 bits (176), Expect = 1e-13
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 179 TYFDDLTWKTIEMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILA 238
TY ++ +T++ ++ K S ++ LL+E+Y +EQ +E V + + + +I ++A
Sbjct: 246 TYIQEVVNETLDPKRVKPETES-MIDLLMEIY-KEQPFASEFTVDNVKAVILDI---VVA 300
Query: 239 GYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGK-ITYDSLKKMKFLDQVLSET 297
G +T+ + L +P + K + E+++ +E G +T D +K + + ++ ET
Sbjct: 301 GTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKET 360
Query: 298 LRIYPLANMIF-RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALW-KDPETYNPDRF 355
LRI P+ ++ R C+++ I G D I G V + A+ D W +P+ + P+RF
Sbjct: 361 LRIEPVIPLLIPRACIQDTKIAGYD--IPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERF 418
Query: 356 SE-ENSASIIPGSYSPFGDGPRIC 378
E E + PFG G R+C
Sbjct: 419 LEKEVDFKGTDYEFIPFGSGRRMC 442
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 68.4 bits (167), Expect = 2e-12
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 238 AGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSET 297
AG +T++T + EL +P IQ K+ EIK T + +++ + + KM +L V+ E
Sbjct: 317 AGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEG 376
Query: 298 LRIYPLANMIF-RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFS 356
LR +P A+ + + E+ + G ++I KG V + D W+ P + P+RF
Sbjct: 377 LRKHPPAHFVLPHKAAEDMEVGG--YLIPKGATVNFMVAEMGRDEREWERPMEFVPERFL 434
Query: 357 E--ENSASIIPGSYS----PFGDGPRIC 378
+ + GS PFG G RIC
Sbjct: 435 AGGDGEGVDVTGSREIRMMPFGVGRRIC 462
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 67.2 bits (164), Expect = 4e-12
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 177 LHTYFDDLTWKTIEMRKEKNIRR------SDLLQLLLEVYEQEQMLPAENRV-----LSR 225
L + DD+ I+ RK +N +D++ LL Y +E + + + L+R
Sbjct: 243 LDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTR 302
Query: 226 ELFVSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLK 285
+ + I ++ G ET + + EL P+ +V++E+ V + ++ L+
Sbjct: 303 DNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNR-RVEESDLE 361
Query: 286 KMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWK 345
K+ +L L ETLR++P ++ E E+ + G + I K V + A+ D W+
Sbjct: 362 KLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAG--YFIPKRSRVMINAWAIGRDKNSWE 419
Query: 346 DPETYNPDRFSEENSASIIPGS---YSPFGDGPRIC 378
DP+T+ P RF + GS + PFG G R C
Sbjct: 420 DPDTFKPSRFLKPG-VPDFKGSHFEFIPFGSGRRSC 454
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 67.2 bits (164), Expect = 4e-12
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 177 LHTYFDDLTWKTIEMRKEKNIRRS---DLLQLLLEVYEQEQMLPAENRVLSRELFVSNIF 233
LH FD L + IE R D L +++ QE + + + + + N+F
Sbjct: 241 LHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMA--NQENSTGEKLTLTNIKALLLNLF 298
Query: 234 IMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQV 293
AG +TS++ +L E+ +P I + +E+ QV + ++ L K+ +L +
Sbjct: 299 T---AGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNR-RLVESDLPKLPYLQAI 354
Query: 294 LSETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNP 352
E+ R +P + + R + + G + I K + + A+ DP +W++PE + P
Sbjct: 355 CKESFRKHPSTPLNLPRVSTQACEVNG--YYIPKNTRLSVNIWAIGRDPDVWENPEEFRP 412
Query: 353 DRFSEENSASIIPGSYS----PFGDGPRIC 378
+RF E +A I P PFG G RIC
Sbjct: 413 ERFLSEKNAKIDPRGNDFELIPFGAGRRIC 442
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 64.7 bits (157), Expect = 2e-11
Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 177 LHTYFDDLTWKTIEMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMI 236
L TY +L +T++ + K S + LL+++Y+ + + + E + I ++
Sbjct: 243 LDTYLQELLDETLDPNRPKQETES-FIDLLMQIYKDQPF----SIKFTHENVKAMILDIV 297
Query: 237 LAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSE 296
+ G +T+ + L +P+ K + E++ V + G ++ + + + +L V+ E
Sbjct: 298 VPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-GYVSEEDIPNLPYLKAVIKE 356
Query: 297 TLRIYPLANMIF-RECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKD-PETYNPDR 354
+LR+ P+ ++ RE + + I G D I +Q+ A+ D A W D P + P+R
Sbjct: 357 SLRLEPVIPILLHRETIADAKIGGYD--IPAKTIIQVNAWAVSRDTAAWGDNPNEFIPER 414
Query: 355 FSEENSASIIPGS---YSPFGDGPRIC 378
F +E+ G PFG G R+C
Sbjct: 415 FMKEHKGVDFKGQDFELLPFGSGRRMC 441
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 63.3 bits (154), Expect = 6e-11
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 24/218 (11%)
Query: 175 RILHTYFDDLTWKTIE----MRKEKNIRRS--DLLQLLLEVYEQEQMLPAEN--RVLSRE 226
R + D+ K I+ R K D + +LL LP EN +
Sbjct: 243 REVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLS-------LPGENGKEHMDDV 295
Query: 227 LFVSNIFIMILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKK 286
+ + MI A +TS T+ + E+ +P + K+++E+ V + L
Sbjct: 296 EIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVV-GRNRMVQESDLVH 354
Query: 287 MKFLDQVLSETLRIYPLAN-MIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWK 345
+ +L V+ ET R++P +I E + I G I V + T L + +W
Sbjct: 355 LNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYY--IPAKTRVFINTHGLGRNTKIWD 412
Query: 346 DPETYNPDRF--SEENSASIIPGS---YSPFGDGPRIC 378
D E + P+R +E + I G PF G R C
Sbjct: 413 DVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKC 450
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 62.8 bits (153), Expect = 9e-11
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 187 KTIEMRKEKNIRRSDLLQL----LLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGYET 242
K IE ++ + + +++V +L + L+ +L N+ M++ G ++
Sbjct: 212 KIIEEKRRAMKNKEEDETGIPKDVVDV-----LLRDGSDELTDDLISDNMIDMMIPGEDS 266
Query: 243 STTTSSLTLHELAHHPDIQDKVRKE---IKQVTRESGGKITYDSLKKMKFLDQVLSETLR 299
+L + L+ P ++ +E +K++ ++G + + + F V++ETLR
Sbjct: 267 VPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLR 326
Query: 300 IYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDRFSEEN 359
+ + N + R+ M++ I G ++I KG V ++H D + +P +NP R+ E++
Sbjct: 327 MGNIINGVMRKAMKDVEIKG--YLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD 384
Query: 360 SASIIPGSYSPFGDGPRIC 378
+ S++PFG G R+C
Sbjct: 385 MNN---SSFTPFGGGQRLC 400
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 56.2 bits (136), Expect = 1e-08
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 190 EMRKEKNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFIMILAGYET--STTTS 247
+ RK DLL + ++ L R++ VS +LAG +T S TS
Sbjct: 268 QRRKLGFSASKDLLSRFMASINDDKYL--------RDIVVS----FLLAGRDTVASALTS 315
Query: 248 SLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMI 307
L L+ HP++ +R+E +V + +++ +K+M +L L E++R++P
Sbjct: 316 FFWL--LSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD 373
Query: 308 FRECMEEYNIP-GTDHVIEKGVFVQLPTLALHTDPALW-KDPETYNPDR------FSEEN 359
+ E+ +P GT + KG V A+ +W D + P+R F EN
Sbjct: 374 SKFAAEDDVLPDGT--FVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPEN 431
Query: 360 SASIIPGSYSPFGDGPRICI 379
P Y F G R+C+
Sbjct: 432 -----PFKYPVFQAGLRVCL 446
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 53.5 bits (128), Expect = 1e-07
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 187 KTIEMRKEKNIRRS-------DLLQLLLEV-YEQEQMLPAENRVLSRELFVSNIFIMILA 238
K I R+++ I R+ D L + V + ++L + R++ IF ++LA
Sbjct: 257 KIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDV----IFSLVLA 312
Query: 239 GYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETL 298
G +T+++ + L+ HP + K+R EI K + L+K+ +L LSE++
Sbjct: 313 GRDTTSSALTWFFWLLSKHPQVMAKIRHEINT-------KFDNEDLEKLVYLHAALSESM 365
Query: 299 RIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALW-KDPETYNPDRFSE 357
R+YP + + +P + H ++ + + AL ++W +D + P+R+
Sbjct: 366 RLYPPLPFNHKAPAKPDVLP-SGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWIS 424
Query: 358 ENSASIIPGSYS--PFGDGPRICI 379
+N SY F GPR C+
Sbjct: 425 DNGGLRHEPSYKFMAFNSGPRTCL 448
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 51.5 bits (124), Expect = 4e-07
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 258 PDIQDKVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNI 317
++Q ++ +E++ + GG +T+ +L+KM + V+ E LRI P + E++ I
Sbjct: 304 EELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVI 363
Query: 318 PGTDHV--IEKG--VFVQLPTLALHTDPALWKDPETYNPDRF 355
D I+KG +F P L DP ++ PE + PDRF
Sbjct: 364 ESHDAAFEIKKGEMLFGYQP-LVTR-DPKVFDRPEEFVPDRF 403
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 50.0 bits (119), Expect = 1e-06
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 176 ILHTYFDDLTWKTIEMRKE-KNIRRSDLLQLLLEVYEQEQMLPAENRVLSRELFVSNIFI 234
I+ Y D + + I+M +E K + D L + + + ++ A +L+ + I
Sbjct: 280 IMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDE-----AGQPLLTADEIKPTIKE 334
Query: 235 MILAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGK---ITYDSLKKMKFLD 291
+++A + + + E+ + P+I K +EI +V GK + + K+ ++
Sbjct: 335 LVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV----GKERFVQESDIPKLNYVK 390
Query: 292 QVLSETLRIYPLANM-IFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETY 350
++ E R++P+A + + + + G + I KG V L L +P +W DP ++
Sbjct: 391 AIIREAFRLHPVAAFNLPHVALSDTTVAG--YHIPKGSQVLLSRYGLGRNPKVWSDPLSF 448
Query: 351 NPDRFSEENSASIIPGS---YSPFGDGPRIC 378
P+R E S + + + F G R C
Sbjct: 449 KPERHLNECSEVTLTENDLRFISFSTGKRGC 479
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 46.9 bits (111), Expect = 1e-05
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 237 LAGYETSTTTSSLTLHELAHHPDIQDKVRKEIKQVTRESGGKITYDS-LKKMKFLDQVLS 295
+A + TL E+ +P+I K KE+ +V + ++ +S + + +L
Sbjct: 324 IAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKD--RLVQESDIPNLNYLKACCR 381
Query: 296 ETLRIYPLANMIFRECMEEYNIPGTDHVIEKGVFVQLPTLALHTDPALWKDPETYNPDR 354
ET RI+P A+ + + G + I KG + + L +P +WKDP Y P+R
Sbjct: 382 ETFRIHPSAHYVPPHVARQDTTLG-GYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPER 439
>gnl|CDD|149875 pfam08941, USP8_interact, USP8 interacting. This domain interacts
with the UBP deubiquitinating enzyme USP8.
Length = 179
Score = 34.4 bits (79), Expect = 0.047
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 82 DILVQDKCSDDLIDYLNENAHKKEWP-------TRQLMGDAMTDIVCKAICG 126
L + C +++ L EN H++ WP TRQ VC+ I G
Sbjct: 95 RSLRESGCPMHILNELVENCHERRWPAGLATLETRQANRRQYEQYVCRRIPG 146
>gnl|CDD|223582 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex,
dihydrolipoamide acyltransferase (E2) component, and
related enzymes [Energy production and conversion].
Length = 404
Score = 31.6 bits (72), Expect = 0.63
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 263 KVRKEIKQVTRESGGKITYDSLKKMKFLDQVLSETLRIYPLANMIFRECMEEYNIPGTDH 322
+RK++K+ + G K+T+ + FL + + + L+ +P N EE +
Sbjct: 214 ALRKKLKEEFEKKGVKLTF-----LSFLVKAVVKALKKFPEVNASIDGDGEEIVYHKYVN 268
Query: 323 V-----IEKGVFV 330
+ +G+ V
Sbjct: 269 IGIAVDTPRGLVV 281
>gnl|CDD|215228 PLN02408, PLN02408, phospholipase A1.
Length = 365
Score = 29.0 bits (65), Expect = 4.8
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 248 SLTLHELAHHPDIQDKVRKEIKQVTRESGGK-----ITYDSL 284
SL A P +Q+ VR+EI ++ + G + IT SL
Sbjct: 168 SLYTSGTAMGPSLQEMVREEIARLLQSYGDEPLSLTITGHSL 209
>gnl|CDD|177014 CHL00075, rpl21, ribosomal protein L21.
Length = 108
Score = 27.5 bits (62), Expect = 5.0
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 157 NTINFFSPYLAKKVHIFPRILHTYFDDLTWKTI--EMRKEKNIRR 199
+ I P+L + + RILH + K +MR +K R+
Sbjct: 47 SEILIGKPWL-ENATVKGRILHHFRGK---KITVYKMRPKKKTRK 87
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y. Members of this family are
RNase Y, an endoribonuclease. The member from Bacillus
subtilis, YmdA, has been shown to be involved in
turnover of yitJ riboswitch [Transcription, Degradation
of RNA].
Length = 514
Score = 28.4 bits (64), Expect = 6.7
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 257 HP----DIQDKVRKEIKQVTRESGGKITYD 282
HP ++ +K KE+ RE G + +D
Sbjct: 274 HPARIEEMVEKATKEVDNAIREEGEQAAFD 303
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.322 0.138 0.411
Gapped
Lambda K H
0.267 0.0858 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,046,172
Number of extensions: 1968226
Number of successful extensions: 1984
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1927
Number of HSP's successfully gapped: 47
Length of query: 382
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 283
Effective length of database: 6,546,556
Effective search space: 1852675348
Effective search space used: 1852675348
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (26.7 bits)