RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9977
(192 letters)
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 120 bits (302), Expect = 2e-34
Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 33/212 (15%)
Query: 2 LDGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID-------LCGPSVPHLL 54
+ +H +++L GKGGVGK+T++ +A+ L D GF V + D S+ +L
Sbjct: 15 IARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLSMTLNGSLNNLQ 74
Query: 55 NIENSDVHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVC 114
+ V + L L ++ + ++ A+ + +
Sbjct: 75 VSRIDPHEETERYRQHVLETKGKELDEAGKRLL----EEDLRSPCTEEIAVFQAFSRVIR 130
Query: 115 WKDVDYLIIDTPPGTS----------------------DEHITVMECLREVQCDGAVLVT 152
++++DT P T M L++ + +LVT
Sbjct: 131 EAGKRFVVMDTAPTGHTLLLLDATGAYHREIAKKMGEKGHFTTPMMLLQDPERTKVLLVT 190
Query: 153 TPQAVSIEDVRKEITFCKKTNIKILGLIENMS 184
P+ + + ++ I G I N S
Sbjct: 191 LPETTPVLEAANLQADLERAGIHPWGWIINNS 222
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 98.1 bits (243), Expect = 1e-25
Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 52/235 (22%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID-------LCGPSVPHLLNIENSDV 61
L +GKGGVGK+++S A+ L ++G +V ++ D + ++ + + S
Sbjct: 10 YLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPASNVGQVFSQTIGNTIQAIASVP 69
Query: 62 HQCPEGWVPVYTDA----------SQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIIN 111
P L + + + A + +
Sbjct: 70 GLSALEIDPQAAAQQYRARIVDPIKGVLPDDVVSSINEQLSGACTTEIAAFDEFTGLLTD 129
Query: 112 DVCWKDVDYLIIDTPPGTS-----------------------------------DEHITV 136
D++I DT P +++
Sbjct: 130 ASLLTRFDHIIFDTAPTGHTIRLLQLPGAWSSFIDSNPEGASCLGPMAGLEKQREQYAYA 189
Query: 137 MECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLIENMSGYTCPHC 191
+E L + + VLV Q ++++V + +K L+ N
Sbjct: 190 VEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQYLVINGVLPKTEAA 244
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 81.7 bits (200), Expect = 8e-20
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
+I ++SGKGG GK+TV+ L++ L D+G KV +D DL ++ +L +++ DV
Sbjct: 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVL 63
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
+ + + + K + D+++ID P
Sbjct: 64 AGEA--NVEDAIYMTQFDNVYVLPGAVDWEHVLKADPRKLPEVIKSLKDKFDFILIDCPA 121
Query: 128 GTSDEHITVMECLREVQCD 146
G + ++ M E
Sbjct: 122 GLQLDAMSAMLSGEEALLV 140
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 81.5 bits (200), Expect = 1e-19
Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 18/195 (9%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIEN--------SD 60
+ + GKGG+GKST + L GL G + ++ D S LL +
Sbjct: 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKSVLDTLRE 62
Query: 61 VHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDY 120
+ E + V S G RG + + + + D+DY
Sbjct: 63 EGEDVELDSILKEGYGGIRCVESGGPE---PGVGCAGRGIITSINMLEQLGAY-TDDLDY 118
Query: 121 LIIDTPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEI----TFCKKTNIKI 176
+ D + +RE + +V + + +++ + K +++
Sbjct: 119 VFYDVLGDVVCGGFAMP--IREGKAQEIYIVASGEMMALYAANNISKGIQKYAKSGGVRL 176
Query: 177 LGLIENMSGYTCPHC 191
G+I N +
Sbjct: 177 GGIICNSRKVANEYE 191
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 79.2 bits (194), Expect = 1e-18
Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 14/193 (7%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
+ GKGG+GKST + L L + G KV I+ D S +L+ + +
Sbjct: 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILHSKAQNTIMEMAAE 63
Query: 69 VPVYTDASQT-------LAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYL 121
D V + RG + D+D++
Sbjct: 64 AGTVEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGRGVITAINFLEEEGAY-EDDLDFV 122
Query: 122 IIDTPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIED----VRKEITFCKKTNIKIL 177
D + +RE + +V + + +++ + + + ++++
Sbjct: 123 FYDVLGDVVCGGFAMP--IRENKAQEIYIVCSGEMMAMYAANNISKGIVKYANSGSVRLG 180
Query: 178 GLIENMSGYTCPH 190
GLI N
Sbjct: 181 GLICNSRNTDRED 193
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli
[TaxId: 562]}
Length = 224
Score = 70.5 bits (171), Expect = 9e-16
Identities = 22/185 (11%), Positives = 45/185 (24%), Gaps = 5/185 (2%)
Query: 10 LVLSGKG-GVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHL-LNIENSDVHQCPEG 67
++G VGK+ S L K G++ G L ++ Q
Sbjct: 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSS 63
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
Y + + + + +A +R + W V+ P
Sbjct: 64 LQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTP 123
Query: 128 GTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLIENMSGYT 187
+ + +LV + I + + + G + N
Sbjct: 124 LSDTFTFADWVT---QEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPP 180
Query: 188 CPHCK 192
Sbjct: 181 GKRHA 185
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 69.0 bits (167), Expect = 3e-15
Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
I V SGKGG GK+T++ L + L G V I+D D+ ++ +L +E V
Sbjct: 3 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVL 62
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
D + + G + + K + + + D L++D P
Sbjct: 63 AGEARIDEAIY---VGPGGVKVVPAGVSLEGLRKANPEKLEDVLTQIMESTDILLLDAPA 119
Query: 128 GTSDEHITVMECLREVQC 145
G + + +E+
Sbjct: 120 GLERSAVIAIAAAQELLL 137
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 47.4 bits (112), Expect = 2e-07
Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 7/174 (4%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNI--ENSDVHQ 63
+++ L G G GK+T + +LAL K KG + ++ D P+ L + E V
Sbjct: 10 RNLWF-LVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPV 68
Query: 64 CPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLII 123
+ + + R ++ ++ D +++
Sbjct: 69 LEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLL 128
Query: 124 DTPPGTSDEHI-TVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKI 176
T E + +V G VL ++ T I
Sbjct: 129 VLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAA---LSARHVTGKPI 179
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 47.3 bits (111), Expect = 2e-07
Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 3/164 (1%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
++V+ G GK+ +S +L L G ++ + + E
Sbjct: 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEE- 61
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
+ + + FL + ++ T R +I + ++
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESI 121
Query: 128 GTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKK 171
E I + +V+ V + ED + I +
Sbjct: 122 CVDPEVI--AANIVQVKLGSPDYVNRDSDEATEDFMRRIECYEN 163
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 38.5 bits (88), Expect = 2e-04
Identities = 16/119 (13%), Positives = 31/119 (26%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
+++L+G GKS + L L + G+ + P
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSI 64
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
P + A + I A + + V DV ++ +
Sbjct: 65 GPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCDG 123
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 36.5 bits (83), Expect = 7e-04
Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 28/191 (14%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVP-------------- 51
+HV L G GVGK+T+ + + LK G V +
Sbjct: 2 RHVFLT--GPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRG 59
Query: 52 ---HLLNIENSDVHQCPEGWVPVYTDASQTLAVMSIGFLL----KNRDDAIIWRGPKKTA 104
+ +C G V + + LA+ + + +I K
Sbjct: 60 PLSRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMEL 119
Query: 105 MIRQII--NDVCWKDVDYLIIDTPPGTSDEHITVMECLREVQCDGAVLVTTPQ--AVSIE 160
+ I +I+ T P + + ++E +R + D V T + +
Sbjct: 120 FSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLALVEEIRNRK-DVKVFNVTKENRNHLLP 178
Query: 161 DVRKEITFCKK 171
D+ + +K
Sbjct: 179 DIVTCVQSSRK 189
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 35.8 bits (82), Expect = 0.001
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 1/99 (1%)
Query: 2 LDGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDV 61
++G ++++ G GVGK+T +LA + +G V + D +
Sbjct: 4 VEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAA-AVEQLQVWGQR 62
Query: 62 HQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGP 100
+ P D++ + +N D I
Sbjct: 63 NNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAG 101
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 35.4 bits (80), Expect = 0.002
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 6/164 (3%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDL--CGPSVPHLLNIENSDVHQ 63
H I VL G G GKS V++++A L L + LN ++
Sbjct: 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWL 64
Query: 64 CPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDV-DYLI 122
+ ++++ L K+ D + P + + + DV +
Sbjct: 65 QALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKG 124
Query: 123 IDTPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEI 166
++ + D ++V Q +E V
Sbjct: 125 HFFKTQMLVTQFETLQEPGADETD-VLVVDIDQ--PLEGVVAST 165
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 35.3 bits (81), Expect = 0.003
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 5 VKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID 44
KH I+ ++G G G STV + +G K ++ D
Sbjct: 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGD 41
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 34.7 bits (79), Expect = 0.004
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 7 HVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPS 49
+VI+ L G G GK+T + +LA K KGFKVG++ D+ P+
Sbjct: 13 YVIM-LVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPA 54
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 34.7 bits (79), Expect = 0.004
Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 28/126 (22%)
Query: 2 LDGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDV 61
+ ++++ G G GK+T +LA D+G V + D + IE +
Sbjct: 6 VPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAA-----AIEQLKI 60
Query: 62 HQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYL 121
G + D A + A+ R + D +
Sbjct: 61 WGERVGATVISHSEGA--------------DPAAVAFDAVAHALAR---------NKDVV 97
Query: 122 IIDTPP 127
IIDT
Sbjct: 98 IIDTAG 103
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 33.8 bits (76), Expect = 0.006
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGIL 41
I +++G GVGKSTV ++ L ++G I+
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKII 35
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 33.8 bits (76), Expect = 0.007
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID 44
++V++G GVG +T S L+ +G ++
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFG 38
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 33.4 bits (75), Expect = 0.008
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLL 54
+L + G GK+T+ +L L +G + G++ V
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPG 49
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 32.9 bits (74), Expect = 0.012
Identities = 15/127 (11%), Positives = 36/127 (28%), Gaps = 13/127 (10%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGP---------SVPHLLNIENS 59
+ + G GK+T+ + +G++VG + G SV H +
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGAVA 62
Query: 60 DVHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAII----WRGPKKTAMIRQIINDVCW 115
+ L + + D ++ K ++R +
Sbjct: 63 TAVEGDGLLQLHLRRPLWRLDDVLALYAPLRLDLVLVEGYKQERHPKVVLVRSEEDWASL 122
Query: 116 KDVDYLI 122
+ + +
Sbjct: 123 QHLANIR 129
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 32.7 bits (73), Expect = 0.014
Identities = 22/164 (13%), Positives = 44/164 (26%), Gaps = 11/164 (6%)
Query: 1 MLDGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSD 60
+G + +++ G G GK+T D ++ V L +
Sbjct: 3 YAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDP 62
Query: 61 VHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDY 120
V L + + ++ V +
Sbjct: 63 KKWAMPFQSYVTLTM-----------LQSHTAPTNKKLKIMERSIFSARYCFVENMRRNG 111
Query: 121 LIIDTPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRK 164
+ T +E +E VQ D + + T V+ E +R+
Sbjct: 112 SLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQ 155
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 32.8 bits (74), Expect = 0.016
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 2 LDGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPS----VPHLLNIE 57
++ V+L + G GVGK+T +L ++ G KV D + +
Sbjct: 2 VEPKGRVVL-VVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRL 60
Query: 58 NSDVHQCPEGWVPVYT 73
+ V Q PEG P
Sbjct: 61 SIPVIQGPEGTDPAAL 76
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 32.4 bits (72), Expect = 0.017
Identities = 17/114 (14%), Positives = 37/114 (32%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
++L + G GK+T++ QL+ L+++G V + +D + N + +
Sbjct: 23 LVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYYL 82
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYL 121
V Q + L K + + + + V
Sbjct: 83 QWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQ 136
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 31.4 bits (70), Expect = 0.052
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID 44
+ L ++G G GKST + L +G KV ++ +D
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVD 91
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.8 bits (68), Expect = 0.072
Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 21/170 (12%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
+ +++G GVGKST +LA L + + + G + H++ + E
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY--------IEGDIINHMVVGGYRPPWESDELL 55
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIID---- 124
+ + + + D + A Q D L +
Sbjct: 56 ALTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREEL 115
Query: 125 --------TPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEI 166
+ + ++E D T + ++ +
Sbjct: 116 LRRDALRKKDEQMGERCLELVEEFESKGIDERYFYNTSH-LQPTNLNDIV 164
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 30.6 bits (68), Expect = 0.093
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 12 LSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGP 48
++G GVGKST L L G KV +L +D
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSST 92
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.4 bits (67), Expect = 0.099
Identities = 24/111 (21%), Positives = 34/111 (30%)
Query: 4 GVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQ 63
G + + L+G G GK+TVS L L G LD D + L D +
Sbjct: 16 GFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREE 75
Query: 64 CPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVC 114
V + V F+ D R + A + V
Sbjct: 76 NVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVD 126
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 30.2 bits (67), Expect = 0.10
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGI 40
+ ++S G GKS++ L +V +
Sbjct: 4 LYIVSAPSGAGKSSLIQALLKTQPLYDTQVSV 35
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 30.1 bits (66), Expect = 0.12
Identities = 18/178 (10%), Positives = 42/178 (23%), Gaps = 5/178 (2%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
I + G+ GK+ + LA+ + + G + + + E +
Sbjct: 25 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY---IDTEGTFRPERLLAVAERY 81
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPG 128
+D +A + +I D
Sbjct: 82 GLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGEL 141
Query: 129 TSD--EHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLIENMS 184
++ + L + + V V V + + +I + S
Sbjct: 142 SARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHAS 199
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 30.0 bits (66), Expect = 0.13
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++ + G G GK T+ +L+ + G V
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSV 31
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 29.5 bits (65), Expect = 0.14
Identities = 24/164 (14%), Positives = 40/164 (24%), Gaps = 11/164 (6%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
IL+LSG G GKST++ LA G D + H +
Sbjct: 6 ILLLSGHPGSGKSTIAEALA---NLPGVPKVHFHSDDLWGYIKHGRIDPWLPQSH--QQN 60
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAII-WRGPKKTAMIRQIINDVCWKDVDYLII---- 123
+ A+ + D + P TA+ R + V I
Sbjct: 61 RMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCLD 120
Query: 124 -DTPPGTSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEI 166
+ + + V + +
Sbjct: 121 RGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSGKDTDQALQSA 164
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 29.7 bits (66), Expect = 0.20
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLA--LGLKDKGFKVGILDID 44
I+ ++G VGKST + L L + +V ++ D
Sbjct: 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTD 119
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 29.2 bits (64), Expect = 0.24
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++VL G GKST S +L L G +
Sbjct: 5 LIVLEGVDRAGKSTQSRKLVEALCAAGHRA 34
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 29.6 bits (65), Expect = 0.24
Identities = 19/120 (15%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQC- 64
K I V+ G G S + G V L G L I N + Q
Sbjct: 3 KKTIAVVGATGRQGASLIRV-----AAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGP 57
Query: 65 ----PEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDY 120
++ A + + + K+ I+ I Y
Sbjct: 58 LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.2 bits (64), Expect = 0.24
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1 MLDG-VKHVILVLSGKGGVGKSTVSTQLALGL 31
+L V + L GG GKS ++ QLA +
Sbjct: 22 VLPNMVAGTVGALVSPGGAGKSMLALQLAAQI 53
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 28.8 bits (63), Expect = 0.25
Identities = 21/180 (11%), Positives = 55/180 (30%), Gaps = 12/180 (6%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCP 65
K + ++++G G GK++++ +A L + L + + D H
Sbjct: 4 KGINILITGTPGTGKTSMAEMIAAELDGFQH---LEVGKLVKENHFYTEYDTELDTHIIE 60
Query: 66 EGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDT 125
E D + + V ++ + ++ +V ++ +
Sbjct: 61 EKDEDRLLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSE 120
Query: 126 PPGTS-DEHITVMECLREVQCD-GAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLIENM 183
E C E + +V + ++E + + +I +E +
Sbjct: 121 AKRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATV-------EEIRERVEVL 173
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 28.7 bits (63), Expect = 0.34
Identities = 22/145 (15%), Positives = 39/145 (26%), Gaps = 10/145 (6%)
Query: 11 VLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWVP 70
V+ G G GK+T + L+ G + + + G + L D+ + +
Sbjct: 6 VIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVIT 65
Query: 71 VYTDASQTLAVMS------IGFLLKNR----DDAIIWRGPKKTAMIRQIINDVCWKDVDY 120
+ A I L N D R I + D
Sbjct: 66 DKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDA 125
Query: 121 LIIDTPPGTSDEHITVMECLREVQC 145
++ D P + E +
Sbjct: 126 VLGDFRPDLTLYLDVTPEVGLKRAR 150
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 28.8 bits (63), Expect = 0.37
Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 4/139 (2%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
++ +SG GKS+V ++ L + + + +
Sbjct: 3 FLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILS---QDSFYRVLTSEQKAKAL 59
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIIND-VCWKDVDYLIIDTP 126
D I LK + + P + + V D ++ +
Sbjct: 60 KGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGI 119
Query: 127 PGTSDEHITVMECLREVQC 145
+ + + ++
Sbjct: 120 LAFYSQEVRDLFQMKLFVD 138
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.4 bits (62), Expect = 0.45
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDI 43
++VLSG VGKSTV L + + F V
Sbjct: 4 VVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTR 38
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 28.3 bits (62), Expect = 0.50
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGIL---DIDLCGPSVPHLLNIENSDVH 62
+ +++SG GK T + + G L +I +
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQL 61
Query: 63 QCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIR 107
E V + + + G+LL + +T IR
Sbjct: 62 VPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIR 106
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 28.0 bits (61), Expect = 0.58
Identities = 19/147 (12%), Positives = 44/147 (29%), Gaps = 13/147 (8%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWV 69
++++G+ GVGK+T+ ++ L + ++ I ++ +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62
Query: 70 PVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPGT 129
+ +G N P R+ +IID
Sbjct: 63 FFT-------SKKLVGSYGVNVQYFEELAIPILERAYREAK----KDRRKVIIIDEIGKM 111
Query: 130 SDEHITVMECLREV--QCDGAVLVTTP 154
+ +R++ + V+ T P
Sbjct: 112 ELFSKKFRDLVRQIMHDPNVNVVATIP 138
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 27.9 bits (61), Expect = 0.61
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDK 34
LVL G GVG+ + L D+
Sbjct: 5 TLVLLGAHGVGRRHIKNTLITKHPDR 30
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 266
Score = 27.9 bits (62), Expect = 0.67
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 17 GVGKSTVSTQLALGLKDKGFKVGILDID 44
+GK + LA L+ +G V I+ +D
Sbjct: 15 SLGKGIAAASLAAILEARGLNVTIMKLD 42
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.6 bits (60), Expect = 0.68
Identities = 21/173 (12%), Positives = 47/173 (27%), Gaps = 13/173 (7%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWV 69
++L+G GVGK+T+ +LA G K + + + E + V
Sbjct: 7 ILLTGTPGVGKTTLGKELA---SKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 63
Query: 70 PVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPGT 129
+ + V+ + + + + + +
Sbjct: 64 DELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQC 123
Query: 130 SDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLIEN 182
+ E + V + E++ + +IL IE
Sbjct: 124 EIFQVLYEE-ATASYKEEIVHQLP--SNKPEELENNVD-------QILKWIEQ 166
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain
{Thermus thermophilus [TaxId: 274]}
Length = 272
Score = 27.9 bits (62), Expect = 0.71
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 17 GVGKSTVSTQLALGLKDKGFKVGILDID 44
+GK +++ L L+ +G++V + ID
Sbjct: 14 SLGKGILTSSLGALLRARGYRVTAIKID 41
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 0.72
Identities = 12/107 (11%), Positives = 31/107 (28%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
I ++ G+ G GKS++ + +GL I + +
Sbjct: 25 INLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTKYRI 84
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCW 115
+ + + ++ L+ N + K + + +
Sbjct: 85 TRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNI 131
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 27.8 bits (61), Expect = 0.82
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 10 LVLSGKGGVGKSTVSTQLA-------LGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVH 62
L+L G G GKST+ Q+ G+ + F+V ++ + +
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCF 68
Query: 63 QCPEGWVPVYTDASQ 77
+ V +S
Sbjct: 69 NDVTAIIFVVASSSY 83
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 27.2 bits (60), Expect = 0.86
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++L+G+ G+GKS AL L +K
Sbjct: 18 VLLTGRSGIGKSE----CALDLINKNHLF 42
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.4 bits (59), Expect = 0.87
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 3/160 (1%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWV 69
+ L G G GKST+ QLA L + + G V + ++E + + E V
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKV 64
Query: 70 PVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPGT 129
Q + + + G +K+R+ + I +
Sbjct: 65 INELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVE 124
Query: 130 SDEHITVMECLREVQ---CDGAVLVTTPQAVSIEDVRKEI 166
+ + E + A + S + V +I
Sbjct: 125 TPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQI 164
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 27.5 bits (60), Expect = 0.89
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 8/139 (5%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDI---DLCGPSVPHLLNIENSDVHQCP 65
I+ L+G G GKSTV+ D G V DI + P P L I +
Sbjct: 5 IVALTGGIGSGKSTVANA----FADLGINVIDADIIARQVVEPGAPALHAIADHFGANMI 60
Query: 66 EGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDT 125
+ A + + + I+Q + V L+ ++
Sbjct: 61 AADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENS 120
Query: 126 PPGTSDEHITVMECLREVQ 144
++ + V++ E Q
Sbjct: 121 LYKKANRVL-VVDVSPETQ 138
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 27.5 bits (61), Expect = 0.97
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 17 GVGKSTVSTQLALGLKDKGFKVGILDID 44
G+GK +++ + LK G V + ID
Sbjct: 13 GIGKGIIASSVGTILKSCGLHVTSIKID 40
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.4 bits (59), Expect = 0.97
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFK 37
+ L+G GK ++ L + L +G +
Sbjct: 7 FTIFLTGYMNSGKDAIARALQVTLNQQGGR 36
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 27.1 bits (59), Expect = 1.0
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGL 31
++V G G GKST + +
Sbjct: 16 VVVAVGFPGAGKSTFIQEHLVSA 38
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 27.4 bits (59), Expect = 1.0
Identities = 14/118 (11%), Positives = 29/118 (24%), Gaps = 5/118 (4%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPH-----LLNIENSDVHQ 63
I ++ G GKS++ L + + + L N V +
Sbjct: 31 ITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKR 90
Query: 64 CPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYL 121
P + + I F +D + + + + L
Sbjct: 91 LPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQEL 148
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 27.5 bits (60), Expect = 1.1
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFK---VGILDID 44
+ SG G GKS S Q+ L +K +G ID
Sbjct: 29 FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASID 67
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 27.1 bits (59), Expect = 1.2
Identities = 22/187 (11%), Positives = 57/187 (30%), Gaps = 31/187 (16%)
Query: 3 DGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVH 62
+ V + +++ GKGGVGKS+ + + ++ + S+
Sbjct: 28 EDVNSLTILVMGKGGVGKSSTVNSI---IGERVVSISPF----------------QSEGP 68
Query: 63 QCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLI 122
+ + A ++ + + +I+ + D + Y+
Sbjct: 69 RPVMVSR--------SRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVD 120
Query: 123 IDTPPGTSDEHITVMECLREVQCDGA----VLVTTPQAVSIEDVRKEITFCKKTNIKILG 178
+ V + + + G ++ T S D F K + +L
Sbjct: 121 RLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQ 180
Query: 179 LIENMSG 185
++ + +
Sbjct: 181 VVRSGAS 187
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 26.8 bits (58), Expect = 1.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDK 34
+V+SG G GKST+ +L D
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDS 28
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 27.2 bits (59), Expect = 1.4
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 3 DGVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDI 43
+H+++ G G GKS + +LA +G ++ I+D
Sbjct: 48 AEPRHLLVN--GATGTGKSVLLRELAYTGLLRGDRMVIVDP 86
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 26.8 bits (59), Expect = 1.5
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++++G GVGKS AL L +G ++
Sbjct: 17 VLITGDSGVGKSE----TALELVQRGHRL 41
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.8 bits (58), Expect = 1.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 10 LVLSGKGGVGKSTVSTQLA 28
+VLSG G GKST+ +L
Sbjct: 3 VVLSGPSGAGKSTLLKKLF 21
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 26.6 bits (57), Expect = 1.6
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 9 ILVLSGKGGVGKSTVSTQLA 28
I++ G G GKST + +
Sbjct: 4 IILTIGCPGSGKSTWAREFI 23
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 26.8 bits (58), Expect = 1.6
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++ LSG GK T + + +
Sbjct: 3 LIFLSGVKRSGKDTTADFIM---SNYSAVK 29
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 255
Score = 26.7 bits (58), Expect = 1.8
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDID 44
K V LV G+GK+ AL L GF V I D +
Sbjct: 1 KKVALVTGAGQGIGKAI-----ALRLVKDGFAVAIADYN 34
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 26.5 bits (57), Expect = 1.8
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
+ + G GKST L +D
Sbjct: 4 KISIEGNIAAGKSTFVNILKQLCEDWEVVP 33
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.9 bits (58), Expect = 1.9
Identities = 17/143 (11%), Positives = 40/143 (27%), Gaps = 9/143 (6%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
+L G+ G GK+++ + + + + P+ L+ + DV +
Sbjct: 33 TAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTP 92
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
+ T I L + +I + T + Q + K + +
Sbjct: 93 YSNRMT-------EAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMY--VM 143
Query: 128 GTSDEHITVMECLREVQCDGAVL 150
+ + R
Sbjct: 144 AVPKINSYLGTIERYETMYADDP 166
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 26.6 bits (57), Expect = 2.0
Identities = 14/139 (10%), Positives = 38/139 (27%), Gaps = 18/139 (12%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEG 67
+I G+ G+GK+T++ + + K L +
Sbjct: 47 MIYGSIGRVGIGKTTLAKFTVKRVSEAAAK-----EGLTVKQAYVNAFNAPNLYTILSLI 101
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPP 127
+ G + A++ + + I+++ + + P
Sbjct: 102 V------RQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEF-------QSMLSSP 148
Query: 128 GTSDEHITVMECLREVQCD 146
+ E + + + E
Sbjct: 149 RIAAEDLYTLLRVHEEIPS 167
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 26.5 bits (58), Expect = 2.1
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGIL 41
+ + L G G+GK+T + + ++ ++
Sbjct: 6 LRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLI 39
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.5 bits (57), Expect = 2.2
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPE 66
+I+V G G GK+T++ + + +KV +++D +P+ +I+ + E
Sbjct: 1 MIVVFVGTAGSGKTTLTGEF-GRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEE 58
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 26.1 bits (56), Expect = 2.4
Identities = 10/105 (9%), Positives = 23/105 (21%), Gaps = 14/105 (13%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
+ LSG G GKST L
Sbjct: 26 VTTLSGGNGAGKSTTMAAFVTA--------------LIPDLTLLHFRNTTEAGATSGSRD 71
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDV 113
++ + + + ++ ++ A + ++
Sbjct: 72 KGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIK 116
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 26.1 bits (57), Expect = 2.6
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++++G G+GKS AL L +G ++
Sbjct: 18 VLITGDSGIGKSE----TALELIKRGHRL 42
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 25.7 bits (55), Expect = 2.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLK 32
VL G G GKST+ +LA L
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALG 26
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.1 bits (56), Expect = 2.7
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 14/142 (9%)
Query: 6 KHVILV-LSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQC 64
KH I++ ++G G GKSTV+ L+ G+ V LD+D + ++ +
Sbjct: 1 KHPIIIGITGNIGSGKSTVAAL----LRSWGYPV--LDLDAL---AARARENKEEELKRL 51
Query: 65 PEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIID 124
V + LA + + + + R ++ ++ + + ++
Sbjct: 52 FPEAVVGGRLDRRALARLV----FSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLE 107
Query: 125 TPPGTSDEHITVMECLREVQCD 146
P + V
Sbjct: 108 IPLLFEKGWEGRLHGTLLVAAP 129
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 26.1 bits (57), Expect = 2.8
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 113 VCWKDVDYLIIDTPPGTSDEHITVMECLREVQCDGAVLV 151
+ID PG D ++ Q D A+L+
Sbjct: 79 FETPKYQVTVIDA-PGHRDFIKNMITGTS--QADCAILI 114
>d2akja2 d.58.36.1 (A:22-174) Ferredoxin--nitrite reductase, NIR
{Spinach (Spinacia oleracea) [TaxId: 3562]}
Length = 153
Score = 25.6 bits (56), Expect = 3.1
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 123 IDTPPG--TSDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKE 165
+ P G TS++ + +++ DG VTT Q I V
Sbjct: 89 LKLPNGVTTSEQTRYLASVIKKYGKDGCADVTTRQNWQIRGVVLP 133
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 26.0 bits (56), Expect = 3.1
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLAL-GLKDKGFKVGIL 41
K + ++ G GK+ + +G + IL
Sbjct: 8 KKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLIL 44
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 25.8 bits (55), Expect = 3.4
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
L + G VGKST L +
Sbjct: 4 RLSIEGNIAVGKSTFVKLLTKTYPEWHVAT 33
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 25.7 bits (56), Expect = 3.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 5 VKHVILVLSGKGGVGKSTVSTQLALGLKDKG 35
V V + L G G+GKST +A
Sbjct: 4 VTIVRIYLDGVYGIGKSTTGRVMASAASGGS 34
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 25.7 bits (56), Expect = 3.6
Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 2/121 (1%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGW 68
+ ++ G G GKST+ + LK +V + D+ L + Q P+
Sbjct: 32 VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQ-P 90
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPG 128
+ T + L + I + + K + + + + D G
Sbjct: 91 LKEMT-VLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAG 149
Query: 129 T 129
Sbjct: 150 E 150
>d3by8a1 d.110.6.1 (A:46-178) Fumarate sensor DcuS {Escherichia coli
[TaxId: 562]}
Length = 133
Score = 25.2 bits (55), Expect = 3.6
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 69 VPVYTDASQTLAVMSIGFLLKNRDDAI 95
P+Y + + + V++IG L I
Sbjct: 105 TPIYDENHKQIGVVAIGLELSRVTQQI 131
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 25.7 bits (55), Expect = 3.6
Identities = 14/118 (11%), Positives = 28/118 (23%), Gaps = 17/118 (14%)
Query: 11 VLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWVP 70
+ G G GKS + + L K SD+ P
Sbjct: 30 AIVGANGSGKSNIGDAILFVLGGLSAKAMRAS--------------RISDLIFAGSKNEP 75
Query: 71 VYTDASQTLAVMSIGFLLKNRDDAIIWR---GPKKTAMIRQIINDVCWKDVDYLIIDT 125
A + + +D ++ R P + ++ ++
Sbjct: 76 PAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDGRSSYWLNGRRATRSEILDILTAA 133
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 25.3 bits (54), Expect = 3.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 10 LVLSGKGGVGKSTVSTQLA 28
+V G G GKST++ LA
Sbjct: 3 IVFIGFMGSGKSTLARALA 21
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 25.5 bits (54), Expect = 4.2
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Query: 4 GVKHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNI 56
G + IL++ G +G+ D G +L + S +
Sbjct: 1 GSRSRILLIGATGYIGRHVAKA-----SLDLGHPTFLLVRESTASSNSEKAQL 48
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 25.5 bits (55), Expect = 4.6
Identities = 8/40 (20%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDL 45
KH++L+ G+G++ AL + L
Sbjct: 1 KHILLITGAGKGIGRAI-----ALEFARAARHHPDFEPVL 35
>d2z0da1 d.3.1.22 (A:5-354) Cysteine protease ATG4B {Human (Homo
sapiens) [TaxId: 9606]}
Length = 350
Score = 25.4 bits (55), Expect = 4.7
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 82 MSIGFLLKNRDDAIIW 97
+++GF K DD W
Sbjct: 313 IAVGFFCKTEDDFNDW 328
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 25.3 bits (54), Expect = 4.8
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 11 VLSGKGGVGKSTVSTQLALGLKDKGFKV 38
++ G GK+T L L+ +
Sbjct: 7 LIEGLDRTGKTTQCNILYKKLQPNCKLL 34
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 25.3 bits (54), Expect = 4.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 10 LVLSGKGGVGKSTVSTQLA 28
+ + G G G +TV +LA
Sbjct: 5 IFMVGARGCGMTTVGRELA 23
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 25.1 bits (53), Expect = 4.9
Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 4/144 (2%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWV 69
+ + G VGKS+++ Q G + I + +N + +
Sbjct: 7 IAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTK----LITVNGQEYHLQLVDTAGQ 62
Query: 70 PVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPGT 129
Y+ QT ++ G++L +I K + + + L+ +
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH 122
Query: 130 SDEHITVMECLREVQCDGAVLVTT 153
+ I+ E + A + +
Sbjct: 123 MERVISYEEGKALAESWNAAFLES 146
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 25.0 bits (53), Expect = 5.0
Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 6/137 (4%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCPEGWV 69
LV+ G GGVGKS ++ Q + + I D L + + I + E +
Sbjct: 7 LVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFS 66
Query: 70 PVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDTPPGT 129
+ M G + Q+I V ++ +I+
Sbjct: 67 ------AMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVD 120
Query: 130 SDEHITVMECLREVQCD 146
V +
Sbjct: 121 LMHLRKVTRDQGKEMAT 137
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 25.3 bits (54), Expect = 5.0
Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 3/133 (2%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCP 65
+ V L+L G G GKST+ Q+ GI++ + + +
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMK---IIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERK 57
Query: 66 EGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDT 125
+ + V + L +D + R + + I N+ + D ++
Sbjct: 58 KWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLN 117
Query: 126 PPGTSDEHITVME 138
+E I
Sbjct: 118 KKDLFEEKIKKSP 130
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 25.3 bits (54), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLA 28
K + + + G GKSTV+ +A
Sbjct: 2 KTIQIAIDGPASSGKSTVAKIIA 24
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 25.2 bits (54), Expect = 5.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 9 ILVLSGKGGVGKSTVSTQL 27
L L G+ G GKS +++Q
Sbjct: 46 FLFLHGRAGSGKSVIASQA 64
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.2 bits (54), Expect = 5.4
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 1/118 (0%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCP 65
+ V ++L G G GKST Q+ + + + GI + D +VP + +
Sbjct: 1 RLVKILLLGAGESGKSTFLKQMRI-IHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERK 59
Query: 66 EGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLII 123
+ + S V S F +D R + + I+N+ + +V ++
Sbjct: 60 RWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILF 117
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 25.0 bits (53), Expect = 5.5
Identities = 12/108 (11%), Positives = 24/108 (22%), Gaps = 6/108 (5%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNI-ENSDVHQCPEG 67
I + G G +T++ G++V +L D
Sbjct: 6 IAIFGATGQTGLTTLAQ-----AVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60
Query: 68 WVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCW 115
+ ++ L AM ++ V
Sbjct: 61 VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVA 108
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 24.9 bits (53), Expect = 6.0
Identities = 15/111 (13%), Positives = 27/111 (24%), Gaps = 1/111 (0%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVG-ILDIDLCGPSVPHLLNIENSDVHQC 64
K ++ + G G GK T + G +L + S + +
Sbjct: 5 KPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEI 64
Query: 65 PEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCW 115
V V + A FL+ + M +
Sbjct: 65 VPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVL 115
>d2p82a1 d.3.1.22 (A:26-359) Cysteine protease ATG4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 334
Score = 25.0 bits (54), Expect = 6.0
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 82 MSIGFLLKNRDDAIIW 97
+++GF K D W
Sbjct: 293 VALGFFCKEEKDFDNW 308
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 24.8 bits (53), Expect = 6.0
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 6/138 (4%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVG-ILDIDLCGPSVPHLLNIENSDVHQC 64
+ + + G G GK TVS+++ + K G +L ++ + +L D +
Sbjct: 5 RLLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKL 64
Query: 65 PEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIID 124
V + + +LL D + I+ V +V
Sbjct: 65 IPDDVMTRLVLHELKNLTQYNWLL---DGFPRTLPQAEALDRAYQIDTVINLNVP--FEV 119
Query: 125 TPPGTSDEHITVMECLRE 142
+D TV++ L+
Sbjct: 120 IKQRLTDRPETVVKRLKA 137
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 24.9 bits (53), Expect = 6.2
Identities = 22/130 (16%), Positives = 42/130 (32%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIENSDVHQCP 65
+ + L+L G G GKST Q+ + GI++ SV + +
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHGSGVPTTGIIEYPFDLQSVIFRMVDVGGQRSERR 60
Query: 66 EGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYLIIDT 125
+ S V + + R + A+ R II +++ ++
Sbjct: 61 KWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLN 120
Query: 126 PPGTSDEHIT 135
+E I
Sbjct: 121 KKDLLEEKIM 130
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus
influenzae [TaxId: 727]}
Length = 205
Score = 24.8 bits (53), Expect = 6.5
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
I+ L+G G GK+T++ D G +
Sbjct: 4 IVGLTGGIGSGKTTIANL----FTDLGVPL 29
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 25.0 bits (53), Expect = 6.6
Identities = 14/117 (11%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Query: 6 KHVILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILD---IDLCGPSVPHLLNIENSDVH 62
+ + V+ G G VGK+ + + + D + + P+ L + ++
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 63 QCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVD 119
+ + P+ + V + ++ P+ T + + +D
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQID 118
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of
collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 111
Score = 24.4 bits (53), Expect = 6.6
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 59 SDVHQCPEGWVPVYTDASQTLAVMS 83
+ QCP GW ++ S + +
Sbjct: 11 IQIPQCPTGWSSLWIGYSFVMHTSA 35
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 24.9 bits (53), Expect = 6.9
Identities = 6/14 (42%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
Query: 179 LIENMSGYTCPHCK 192
++E S + CPHC
Sbjct: 22 VLEFFS-FFCPHCY 34
>d2jfga3 c.72.2.1 (A:94-297)
UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
{Escherichia coli [TaxId: 562]}
Length = 204
Score = 24.7 bits (52), Expect = 7.0
Identities = 15/110 (13%), Positives = 25/110 (22%), Gaps = 4/110 (3%)
Query: 16 GGVGKSTVSTQLALGLKDKGFKVGI----LDIDLCGPSVPHLLNIENSDVHQCPEGWVPV 71
G GKSTV+T + K G VG+ L L + Q
Sbjct: 18 GSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQ 77
Query: 72 YTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDYL 121
A+ + + + + +
Sbjct: 78 AVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPI 127
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 24.9 bits (54), Expect = 7.0
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 20/165 (12%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCG----------------PSVPH 52
++ + G+ G GKST++ + + +V I DL + +
Sbjct: 31 VIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLN 90
Query: 53 LLNIENSDVHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIIN- 111
I+N + V A A I L + + + +G + RQ I
Sbjct: 91 RSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAI 150
Query: 112 -DVCWKDVDYLIIDTPPGTSDEHIT--VMECLREVQCDGAVLVTT 153
+ LI D D +M + ++ V++
Sbjct: 151 ARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIA 195
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 25.0 bits (54), Expect = 7.0
Identities = 6/31 (19%), Positives = 12/31 (38%)
Query: 8 VILVLSGKGGVGKSTVSTQLALGLKDKGFKV 38
+ + + G G+GK+T + L
Sbjct: 5 LRVYIDGPHGMGKTTTTQLLVALGSRDDIVY 35
>d1t61c1 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of
collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 109
Score = 24.0 bits (52), Expect = 7.1
Identities = 3/16 (18%), Positives = 6/16 (37%)
Query: 58 NSDVHQCPEGWVPVYT 73
CP G +++
Sbjct: 8 TDQEPMCPVGMNKLWS 23
>d2icga1 d.369.1.1 (A:1-158) Uncharacterized protein Lin2918
{Listeria innocua [TaxId: 1642]}
Length = 158
Score = 24.3 bits (52), Expect = 8.1
Identities = 6/61 (9%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Query: 39 GILDIDLCGPSVPHLL--NIENSDVHQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAII 96
GI L S+P + + + + + ++ + + + I+
Sbjct: 65 GISKRGLSAASIPDVKFATEQARTFGDINKEMIMIKNSGYGSIFSIDTSIIGSEGEPVIV 124
Query: 97 W 97
Sbjct: 125 E 125
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of
collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Length = 111
Score = 24.0 bits (52), Expect = 8.2
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 59 SDVHQCPEGWVPVYTDASQTLAVMS 83
+ CP GW ++ S + +
Sbjct: 8 VSIPHCPAGWRSLWIGYSFLMHTAA 32
>d2d0oa1 c.8.6.1 (A:93-254) Diol dehydratase-reactivating factor
large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}
Length = 162
Score = 24.3 bits (53), Expect = 8.6
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
Query: 124 DTPPGT---SDEHITVMECLREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKILGLI 180
TP G + IT E L D ++ A D+ I + +I G+I
Sbjct: 12 KTPGGAGLGTGITITPQE-LLTRPADAPYILVVSSAFDFADIASVINASLRAGYQITGVI 70
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 24.5 bits (53), Expect = 8.6
Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 20/164 (12%)
Query: 9 ILVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPS-----------VPHLLNIE 57
IL L G G GKST+ ++A KG + L S
Sbjct: 27 ILHLVGPNGAGKSTLLARMAGMTSGKG-SIQFAGQPLEAWSATKLALHRAYLSQQQTPPF 85
Query: 58 NSDVHQCPEGWVPVYTDA---SQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVC 114
+ V T + +++ L + + ++ + ++
Sbjct: 86 ATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITP 145
Query: 115 WKDVD--YLIIDTPPGTSDEHIT--VMECLREVQCDG-AVLVTT 153
+ L++D P + D + + L + G A+++++
Sbjct: 146 QANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSS 189
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 24.1 bits (51), Expect = 9.4
Identities = 16/119 (13%), Positives = 30/119 (25%), Gaps = 8/119 (6%)
Query: 10 LVLSGKGGVGKSTVSTQLALGLKDKGFKVGILDIDLCGPSVPHLLNIEN--------SDV 61
+VL G G GK T + L G + L + SD
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDD 64
Query: 62 HQCPEGWVPVYTDASQTLAVMSIGFLLKNRDDAIIWRGPKKTAMIRQIINDVCWKDVDY 120
+ + + + GF + + K+ + ++ D
Sbjct: 65 IMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELL 123
>d2ahma1 a.8.9.1 (A:6-78) Nonstructural protein 7, NSP7 {SARS
coronavirus [TaxId: 227859]}
Length = 73
Score = 23.3 bits (50), Expect = 9.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 140 LREVQCDGAVLVTTPQAVSIEDVRKEITFCKKTNIKIL 177
+ +V+C VL++ Q + +E K C + + IL
Sbjct: 3 MSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDIL 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.139 0.431
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 736,454
Number of extensions: 33926
Number of successful extensions: 329
Number of sequences better than 10.0: 1
Number of HSP's gapped: 325
Number of HSP's successfully gapped: 174
Length of query: 192
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 112
Effective length of database: 1,309,196
Effective search space: 146629952
Effective search space used: 146629952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.8 bits)