BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy998
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VFB2|RT10_DROME 28S ribosomal protein S10, mitochondrial OS=Drosophila melanogaster
GN=mRpS10 PE=2 SV=2
Length = 173
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 101/123 (82%)
Query: 41 PVPDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSV 100
P PDKLYS++ ELR DP V+ SY+ FAT AA+HL IE G+C++ +KAHHER TLL+SV
Sbjct: 47 PEPDKLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSV 106
Query: 101 HVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHF 160
H+ K+ RVQYEVRT+FR+MNFHKLTGST DTFLEYI+RNLPEGVAL+ ++ ELQ++P H
Sbjct: 107 HIYKKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGVALQASRTELQEIPEHL 166
Query: 161 VPP 163
P
Sbjct: 167 RQP 169
>sp|Q8N5M1|ATPF2_HUMAN ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo
sapiens GN=ATPAF2 PE=1 SV=1
Length = 289
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 133/269 (49%), Gaps = 62/269 (23%)
Query: 168 SGSPETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 227
+G P S P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP L
Sbjct: 20 AGGPSASMSPGPTIPSPARAYAPPTER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAKL 78
Query: 228 FKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSISY------------------SN 267
F V SE LA+A+A EWD+Q +TI+ TMHL NTS+ ++
Sbjct: 79 FTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTD 138
Query: 268 DIAGPSVDPKDRATIQRHFLS---------YNFE-----TVMGVNFAVET---------- 303
I +P+ +QR+ Y E ++MG + +T
Sbjct: 139 TICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSHLAS 198
Query: 304 ---------------LKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLH 348
LKS+VLTL ID +L++E+AV LS+LEEEYQI WG +EWAHD
Sbjct: 199 YNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYE 258
Query: 349 QQELQARLAAAIFYVHVNTLKESNGVKKK 377
QEL+AR AA ++H+ + ES VK K
Sbjct: 259 LQELRARTAAGTLFIHLCS--ESTTVKHK 285
>sp|Q91YY4|ATPF2_MOUSE ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus
musculus GN=Atpaf2 PE=2 SV=1
Length = 289
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 132/272 (48%), Gaps = 74/272 (27%)
Query: 171 PETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV 230
P S P P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP LF V
Sbjct: 23 PTVSVWPGPAPQPPARAYVPPTER-KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTV 81
Query: 231 SSEPLALAIAAEWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKD---RATIQRHFL 287
SE LA+A+A EWD+Q +TI+ TMHL + S N P+ KD RA ++ FL
Sbjct: 82 PSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDN----PTQRSKDQLIRAAVK--FL 135
Query: 288 S--------------------------------YNFE-----TVMGVNFAVET------- 303
Y E ++MG + +T
Sbjct: 136 DTDTICYRVEEPETLVELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSH 195
Query: 304 ------------------LKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAH 345
LKS++LTL ID +L++E+AV LS+LEEEYQI WG +EWAH
Sbjct: 196 LSSYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAH 255
Query: 346 DLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
D QEL+AR AA +VH+ + ES+ VK K
Sbjct: 256 DYELQELRARTAAGTLFVHLCS--ESSTVKHK 285
>sp|P82670|RT10_BOVIN 28S ribosomal protein S10, mitochondrial OS=Bos taurus GN=MRPS10
PE=1 SV=2
Length = 201
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I + +K ER+TLL+SVH+
Sbjct: 69 PDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKI--ERFTLLKSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK L++LP H
Sbjct: 127 FKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHIKK 186
Query: 163 P 163
P
Sbjct: 187 P 187
>sp|Q5RFM3|RT10_PONAB 28S ribosomal protein S10, mitochondrial OS=Pongo abelii GN=MRPS10
PE=2 SV=1
Length = 201
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 69 PDILYKRLSVLVKGHDKAVLDSYGYFAVLAAKELGISIKVHEPPRKI--ERFTLLQSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK +L++LP H
Sbjct: 127 YKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKE 186
Query: 163 P 163
P
Sbjct: 187 P 187
>sp|P82664|RT10_HUMAN 28S ribosomal protein S10, mitochondrial OS=Homo sapiens GN=MRPS10
PE=1 SV=2
Length = 201
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 69 PDILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLQSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK +L++LP H
Sbjct: 127 YKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKE 186
Query: 163 P 163
P
Sbjct: 187 P 187
>sp|Q80ZK0|RT10_MOUSE 28S ribosomal protein S10, mitochondrial OS=Mus musculus GN=Mrps10
PE=2 SV=1
Length = 160
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++A+D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 28 PDTLYKRLSILVKAHDRAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLKSVHI 85
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTA +LEYIQRNLPEGVA++VTK ++Q+LP H
Sbjct: 86 FKKHRVQYEMRTLYRCLELKHLTGSTASVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 145
Query: 163 P 163
P
Sbjct: 146 P 146
>sp|Q5SPH9|RT10_DANRE Probable 28S ribosomal protein S10, mitochondrial OS=Danio rerio
GN=mrps10 PE=2 SV=1
Length = 187
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 23 TSTANIRHSSSVISQEKEPV-----PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLN 77
T+ + H+ SV S + PD LY R+ +++ +D V++SY FAT AA+ L
Sbjct: 32 TACPRLVHTVSVFSPPSPAITESEEPDTLYQRLSVQVKGHDRAVLDSYEFFATLAAKELG 91
Query: 78 IEIGECYAQKKAHHERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQ 137
+ + + + K H ++ TLL+S H+ K+ RVQYE+RT++R + ++TGS+A +LEYIQ
Sbjct: 92 LSLEKVFEPPK-HIDKLTLLKSRHIFKKHRVQYEMRTHYRCIQISRITGSSARVYLEYIQ 150
Query: 138 RNLPEGVALKVTKYELQKLPSHFVPPTLLESGSPETSS 175
RNLPEGVA++VTK ++K+P H P L + PE S
Sbjct: 151 RNLPEGVAMEVTKTAMEKIPEHIQKP-LWDDNKPEASG 187
>sp|Q7TQ82|RT10_RAT 28S ribosomal protein S10, mitochondrial OS=Rattus norvegicus
GN=Mrps10 PE=2 SV=1
Length = 155
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++A+D V++SY FA AA+ L + I +K ER+TLL+SVH+
Sbjct: 23 PDTLYKRLSILVKAHDKAVLDSYEYFAVLAAKELGLSIKVHEPPRKI--ERFTLLKSVHI 80
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTG TA+ +LEYIQRNLPEGVA++VTK ++Q+LP H
Sbjct: 81 FKKHRVQYEMRTLYRCLELKHLTGCTANVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 140
Query: 163 P 163
P
Sbjct: 141 P 141
>sp|Q1LZ96|ATPF2_BOVIN ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos
taurus GN=ATPAF2 PE=2 SV=1
Length = 289
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 258 RYNTSISYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRK 317
RY I S I GPS+ + R + H SYN + G+ F V LKS+VLTL D +
Sbjct: 168 RYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLVLTLGLTDLR 227
Query: 318 LSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
L++E+AV LS+LEEEYQI WG +EWAHD QEL+AR AA +VH+ + ES VK K
Sbjct: 228 LTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLCS--ESTAVKHK 285
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 196 KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 255
KRFY+ V I + G +EI+LDHRKL+TP G LF V SE LA+A+A EWD+Q +TI+ TM
Sbjct: 47 KRFYQNVSISQGEGGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQDTIKMYTM 106
Query: 256 HLRYNTSISYSNDIAGPSVDPKDR 279
HL + S N P+ KD+
Sbjct: 107 HLTTLCNTSLDN----PTQRDKDQ 126
>sp|Q9XWV5|RT10_CAEEL Probable 28S ribosomal protein S10, mitochondrial OS=Caenorhabditis
elegans GN=Y37D8A.18 PE=3 SV=1
Length = 156
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 42 VPDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYT--LLRS 99
+PDKLYS + E R +D V+ SY+ F QHL I G + + R+ LRS
Sbjct: 36 LPDKLYSSVEIEYRGHDKAVLKSYTSFLQQVCQHLEIPQGRL---EVLPYIRWVQPALRS 92
Query: 100 VHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLP 157
V K+ ++ YE RT+ + +TGSTA TFLEYIQRN+PEGV ++V ELQ LP
Sbjct: 93 KFVHKKYKLHYETRTHISKLEILNVTGSTASTFLEYIQRNIPEGVGMRVGFTELQPLP 150
>sp|Q615B0|RT10_CAEBR Probable 28S ribosomal protein S10, mitochondrial OS=Caenorhabditis
briggsae GN=CBG15759 PE=3 SV=1
Length = 158
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query: 23 TSTANIRHSSSVIS-----QEKEPVPDKLYSRICCELRANDPEVMNSYSKFATAAAQHLN 77
+ T N+R ++ ++ Q + +PDKLYS I E R +D V+ SY+ F +HL
Sbjct: 15 SKTRNVRTLAATVNPAEQQQVQAVLPDKLYSSIEIEYRGHDKAVLKSYTTFLQQVCKHLE 74
Query: 78 IEIGECYAQKKAHHERYT--LLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEY 135
I G + + R+ LRS V K+ ++ YE RT+ + +TGSTA TFLEY
Sbjct: 75 IPQGRL---EVLPYIRWVQPALRSKFVHKKYKLHYETRTHITKLEILNVTGSTASTFLEY 131
Query: 136 IQRNLPEGVALKVTKYELQKLP 157
I+RN+PEGV ++V ELQ LP
Sbjct: 132 IERNIPEGVGMRVGFTELQPLP 153
>sp|Q2YDI5|RM48_BOVIN 39S ribosomal protein L48, mitochondrial OS=Bos taurus GN=MRPL48
PE=1 SV=1
Length = 212
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 44 DKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVV 103
D Y + L A D + SY+++ HL+I++ E YA E +L+
Sbjct: 85 DYEYGTLNIHLIAYDMALTESYAQYVHNLCNHLSIKVEESYAMPTKTME---VLQLQDQG 141
Query: 104 KRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHF 160
+ + + T+ R + L + A+ FLE IQ NLPEGV L V ++ + F
Sbjct: 142 NKMLLDSVLTTHERVVQISGLNATFAEIFLEIIQSNLPEGVKLSVREHTEEDFKGRF 198
>sp|P51286|RR10_PORPU 30S ribosomal protein S10, chloroplastic OS=Porphyra purpurea
GN=rps10 PE=3 SV=1
Length = 105
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLN-IEIGECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A + ++N+ K A+ N I +G K Y +LRS HV K R
Sbjct: 8 KIRIKLKAYNSSLLNTSCKKIVDTAERTNAIAVGPIPLPTK--RRIYCVLRSPHVDKDSR 65
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
+E+R++ R ++ H+ + T D ++ NLP GV ++V
Sbjct: 66 EHFEIRSHRRIIDIHQPSSQTIDALMKL---NLPSGVDIEV 103
>sp|Q2YAZ8|RS10_NITMU 30S ribosomal protein S10 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsJ PE=3 SV=1
Length = 102
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDVLRSPHVNKTSRDQFEIRTHLRLMDIMDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|C1DAR6|RS10_LARHH 30S ribosomal protein S10 OS=Laribacter hongkongensis (strain
HLHK9) GN=rpsJ PE=3 SV=1
Length = 103
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDILRSPHVNKTSRDQFEIRTHLRLMDIIDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|Q9UT16|ATP12_SCHPO Protein atp12, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=atp12 PE=3 SV=2
Length = 291
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 252 RSTMHLRYNTSISYSNDIAGPSVDPKDRAT---IQRHFLSYNFETVMGVNFAVETLKSIV 308
+ T + +SY + AG + + T I+ S N + +V KS +
Sbjct: 162 KETFENKLGVQLSYLDGDAGIIAHKQTQETHERIRNWLSSLNSWQLAAFERSVSCCKSFI 221
Query: 309 LTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAA 359
++ + L+ E+A L+ LE +YQ WG +E AH++ ++L+ +LA++
Sbjct: 222 VSFMILKGYLNSEKAAALTNLELQYQTNRWGSLEDAHEIDNEDLKNKLASS 272
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 196 KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWD 244
+RF+K NG+ I LD R LK+P+G + KV E LA IA EWD
Sbjct: 39 RRFWKNTATKIQNGEVLIQLDGRNLKSPSGKIVKVPKEMELLAHLIALEWD 89
>sp|Q250N3|RS10_DESHY 30S ribosomal protein S10 OS=Desulfitobacterium hafniense (strain
Y51) GN=rpsJ PE=3 SV=1
Length = 102
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 94 YTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
YT+LRS HV K R Q+E+RT+ R ++ + T T D + +LP GV +++
Sbjct: 49 YTILRSPHVNKDSREQFEMRTHKRLIDILEPTSKTVDALMRL---DLPAGVDIEI 100
>sp|B8G1W5|RS10_DESHD 30S ribosomal protein S10 OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=rpsJ PE=3 SV=1
Length = 102
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 94 YTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
YT+LRS HV K R Q+E+RT+ R ++ + T T D + +LP GV +++
Sbjct: 49 YTILRSPHVNKDSREQFEMRTHKRLIDILEPTSKTVDALMRL---DLPAGVDIEI 100
>sp|Q82X89|RS10_NITEU 30S ribosomal protein S10 OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rpsJ PE=3 SV=1
Length = 102
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDVLRSPHVNKTSRDQFEIRTHLRLMDIIDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|Q0AIJ6|RS10_NITEC 30S ribosomal protein S10 OS=Nitrosomonas eutropha (strain C91)
GN=rpsJ PE=3 SV=1
Length = 102
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDVLRSPHVNKTSRDQFEIRTHLRLMDIIDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|P0CE02|RS10_CHLTR 30S ribosomal protein S10 OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=rpsJ PE=3 SV=1
Length = 105
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D +LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDALK---MLSLPAGVDIKI 102
>sp|B0BC73|RS10_CHLTB 30S ribosomal protein S10 OS=Chlamydia trachomatis serovar L2b
(strain UCH-1/proctitis) GN=rpsJ PE=3 SV=1
Length = 105
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D +LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDALK---MLSLPAGVDIKI 102
>sp|Q3KLR4|RS10_CHLTA 30S ribosomal protein S10 OS=Chlamydia trachomatis serovar A
(strain HAR-13 / ATCC VR-571B) GN=rpsJ PE=3 SV=1
Length = 105
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D +LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDALK---MLSLPAGVDIKI 102
>sp|B0B808|RS10_CHLT2 30S ribosomal protein S10 OS=Chlamydia trachomatis serovar L2
(strain 434/Bu / ATCC VR-902B) GN=rpsJ PE=3 SV=1
Length = 105
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D +LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDALK---MLSLPAGVDIKI 102
>sp|P0A4A2|RS10_CHLMU 30S ribosomal protein S10 OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=rpsJ PE=3 SV=1
Length = 105
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D +LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDALK---MLSLPAGVDIKI 102
>sp|Q5P333|RS10_AROAE 30S ribosomal protein S10 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsJ PE=3 SV=1
Length = 103
Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ LLRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDLLRSPHVNKASRDQFEIRTHQRLMDIIDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|Q8JZS9|RM48_MOUSE 39S ribosomal protein L48, mitochondrial OS=Mus musculus GN=Mrpl48
PE=2 SV=1
Length = 211
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 44 DKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVV 103
D Y + L A D + SY+++ L+I++ E YA E ++R
Sbjct: 84 DYEYGVLNIHLTAYDMSLAESYAQYVHRLCNRLSIKVEESYAMPTKTME---VMRLPDQG 140
Query: 104 KRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHF 160
+ + + T+ R + L+ + A+ FLE +Q NLPEGV L V ++ + F
Sbjct: 141 NKMVLDSVLTTHERVVQISGLSATFAEIFLEVLQSNLPEGVRLSVREHTEEDFKGRF 197
>sp|P66333|RS10_NEIMB 30S ribosomal protein S10 OS=Neisseria meningitidis serogroup B
(strain MC58) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKL---DLPAGVDVEI 100
>sp|P66332|RS10_NEIMA 30S ribosomal protein S10 OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKL---DLPAGVDVEI 100
>sp|A9M3W8|RS10_NEIM0 30S ribosomal protein S10 OS=Neisseria meningitidis serogroup C
(strain 053442) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKL---DLPAGVDVEI 100
>sp|Q5F5S5|RS10_NEIG1 30S ribosomal protein S10 OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKL---DLPAGVDVEI 100
>sp|P66328|RS10_HELPY 30S ribosomal protein S10 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|B2UV83|RS10_HELPS 30S ribosomal protein S10 OS=Helicobacter pylori (strain Shi470)
GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|P66329|RS10_HELPJ 30S ribosomal protein S10 OS=Helicobacter pylori (strain J99)
GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|Q1CRU0|RS10_HELPH 30S ribosomal protein S10 OS=Helicobacter pylori (strain HPAG1)
GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|B5Z8W8|RS10_HELPG 30S ribosomal protein S10 OS=Helicobacter pylori (strain G27)
GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|Q17ZD9|RS10_HELAH 30S ribosomal protein S10 OS=Helicobacter acinonychis (strain
Sheeba) GN=rpsJ PE=3 SV=1
Length = 104
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 49 RICCELRANDPEVMNSYSKFATAAAQHLNIEI-GECYAQKKAHHERYTLLRSVHVVKRCR 107
+I +L+A D V++ A + EI G K ++RYT+LRS HV K R
Sbjct: 3 KIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTK--NKRYTVLRSPHVNKDSR 60
Query: 108 VQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYE 152
Q+E+R Y R ++ T T D+ ++ +L V ++VT E
Sbjct: 61 EQFEIRVYSRLIDIISATPETVDSLMKL---DLAPEVDVEVTSME 102
>sp|Q3SLQ0|RS10_THIDA 30S ribosomal protein S10 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=rpsJ PE=3 SV=1
Length = 102
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDVLRSPHVNKSSRDQFEIRTHRRLMDIMDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|A6GZA0|RS10_FLAPJ 30S ribosomal protein S10 OS=Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511) GN=rpsJ PE=3 SV=1
Length = 101
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 90 HHERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
H + +T+LRS HV K+ R Q+EV +Y R ++ + + T D ++ LP GV +++
Sbjct: 44 HKKLFTVLRSPHVNKKAREQFEVMSYKRLIDIYSSSSKTIDALMKL---ELPSGVEVEI 99
>sp|B1XSQ0|RS10_POLNS 30S ribosomal protein S10 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDILRSPHVNKTSRDQLEIRTHLRLMDIVDPTEKTVDALMKL---DLPAGVGVEI 100
>sp|A5FMY2|RS10_FLAJ1 30S ribosomal protein S10 OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=rpsJ PE=3 SV=1
Length = 101
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 90 HHERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
H + +T+LRS HV K+ R Q+EV +Y R ++ + + T D ++ LP GV +++
Sbjct: 44 HKKLFTVLRSPHVNKKAREQFEVMSYKRLIDIYSSSSKTIDALMKL---ELPSGVEVEI 99
>sp|A5CXK3|RS10_VESOH 30S ribosomal protein S10 OS=Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA) GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLE 134
ER+T+L S HV K+ R QYE+RTY R M+ T T D ++
Sbjct: 47 ERFTVLTSPHVNKKARDQYELRTYVRLMDVISPTDKTVDALMK 89
>sp|Q253F2|RS10_CHLFF 30S ribosomal protein S10 OS=Chlamydophila felis (strain Fe/C-56)
GN=rpsJ PE=3 SV=2
Length = 105
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D L+ + LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDA-LKMLA--LPAGVDIKI 102
>sp|Q824F9|RS10_CHLCV 30S ribosomal protein S10 OS=Chlamydophila caviae (strain GPIC)
GN=rpsJ PE=3 SV=1
Length = 105
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D L+ + LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDA-LKMLA--LPAGVDIKI 102
>sp|Q5L6S4|RS10_CHLAB 30S ribosomal protein S10 OS=Chlamydophila abortus (strain S26/3)
GN=rpsJ PE=3 SV=2
Length = 105
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D L+ + LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLIDILDPTGKTIDA-LKMLA--LPAGVDIKI 102
>sp|A1AVJ9|RS10_RUTMC 30S ribosomal protein S10 OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=rpsJ PE=3 SV=1
Length = 103
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLE 134
ER+T+L S HV K+ R QYE+RTY R M+ T T D ++
Sbjct: 47 ERFTVLTSPHVNKKARDQYELRTYVRLMDVISPTDKTVDALMK 89
>sp|Q9Z803|RS10_CHLPN 30S ribosomal protein S10 OS=Chlamydia pneumoniae GN=rpsJ PE=3 SV=1
Length = 105
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
E YT+LRS HV K+ R Q+E+RT+ R ++ TG T D L+ + LP GV +K+
Sbjct: 49 EVYTVLRSPHVDKKSREQFEIRTHKRLVDILDPTGKTIDA-LKMLA--LPAGVDIKI 102
>sp|Q1H4N8|RS10_METFK 30S ribosomal protein S10 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rpsJ PE=3 SV=1
Length = 102
Score = 42.4 bits (98), Expect = 0.006, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ +LRS HV K R Q+E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFDILRSPHVNKTSRDQFEIRTHQRLMDIVDPTDKTVDALMKL---DLPAGVDVEI 100
>sp|A1KB28|RS10_AZOSB 30S ribosomal protein S10 OS=Azoarcus sp. (strain BH72) GN=rpsJ
PE=3 SV=1
Length = 103
Score = 42.0 bits (97), Expect = 0.008, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKV 148
ER+ LLRS HV K R Q E+RT+ R M+ T T D ++ +LP GV +++
Sbjct: 47 ERFNLLRSPHVNKTSRDQMEIRTHQRLMDIIDPTDKTVDALMKL---DLPAGVDVEI 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,217,762
Number of Sequences: 539616
Number of extensions: 5601897
Number of successful extensions: 14371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 13799
Number of HSP's gapped (non-prelim): 683
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)