Your job contains 1 sequence.
>psy998
ELLSDFRPLLFTDGSRRLLNGSTSTANIRHSSSVISQEKEPVPDKLYSRICCELRANDPE
VMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVVKRCRVQYEVRTYFRWMN
FHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVPPTLLESGSPETSSVPLKY
PFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA
AEWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFA
VETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAI
FYVHVNTLKESNGVKKKASN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy998
(380 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038307 - symbol:mRpS10 "mitochondrial ribosomal p... 439 2.2e-41 1
UNIPROTKB|I3LAB4 - symbol:ATPAF2 "Uncharacterized protein... 211 2.0e-35 3
FB|FBgn0021856 - symbol:l(2)k14505 "lethal (2) k14505" sp... 332 4.9e-30 1
UNIPROTKB|Q8N5M1 - symbol:ATPAF2 "ATP synthase mitochondr... 294 2.5e-28 2
ZFIN|ZDB-GENE-040914-39 - symbol:mrps10 "mitochondrial ri... 311 8.2e-28 1
ZFIN|ZDB-GENE-050411-18 - symbol:atpaf2 "ATP synthase mit... 305 3.5e-27 1
UNIPROTKB|P82664 - symbol:MRPS10 "28S ribosomal protein S... 304 4.5e-27 1
UNIPROTKB|F1RUU2 - symbol:MRPS10 "Uncharacterized protein... 304 4.5e-27 1
UNIPROTKB|P82670 - symbol:MRPS10 "28S ribosomal protein S... 303 5.7e-27 1
MGI|MGI:1928139 - symbol:Mrps10 "mitochondrial ribosomal ... 303 5.7e-27 1
UNIPROTKB|F1PBB7 - symbol:MRPS10 "Uncharacterized protein... 301 9.4e-27 1
RGD|1311516 - symbol:Mrps10 "mitochondrial ribosomal prot... 299 1.5e-26 1
UNIPROTKB|Q7TQ82 - symbol:Mrps10 "28S ribosomal protein S... 299 1.5e-26 1
RGD|1305161 - symbol:Atpaf2 "ATP synthase mitochondrial F... 291 1.1e-25 1
MGI|MGI:2180561 - symbol:Atpaf2 "ATP synthase mitochondri... 290 1.4e-25 1
UNIPROTKB|Q1LZ96 - symbol:ATPAF2 "ATP synthase mitochondr... 289 1.8e-25 1
UNIPROTKB|F1PRK7 - symbol:ATPAF2 "Uncharacterized protein... 288 2.2e-25 1
UNIPROTKB|J9P3Y1 - symbol:ATPAF2 "Uncharacterized protein... 288 2.2e-25 1
UNIPROTKB|E1BUZ7 - symbol:ATPAF2 "Uncharacterized protein... 285 4.6e-25 1
UNIPROTKB|E1C1Y5 - symbol:MRPS10 "Uncharacterized protein... 275 5.3e-24 1
WB|WBGene00012556 - symbol:mrps-10 species:6239 "Caenorha... 226 1.8e-18 1
UNIPROTKB|C9J2Q2 - symbol:ATPAF2 "ATP synthase mitochondr... 208 2.0e-18 2
UNIPROTKB|E9PMH4 - symbol:ATPAF2 "ATP synthase mitochondr... 208 2.0e-18 2
TAIR|locus:2168833 - symbol:AT5G40660 species:3702 "Arabi... 116 8.3e-12 2
WB|WBGene00013804 - symbol:Y116A8C.27 species:6239 "Caeno... 168 2.2e-10 1
DICTYBASE|DDB_G0292678 - symbol:atp12 "ATP synthase mitoc... 114 1.7e-09 2
ASPGD|ASPL0000034424 - symbol:AN9062 species:162425 "Emer... 114 2.0e-09 2
UNIPROTKB|Q0C3G5 - symbol:HNE_1005 "ATP12 chaperone famil... 113 3.1e-09 2
UNIPROTKB|Q5LW25 - symbol:SPO0518 "Uncharacterized protei... 121 3.0e-06 2
TIGR_CMR|SPO_0518 - symbol:SPO_0518 "conserved hypothetic... 121 3.0e-06 2
FB|FBgn0031357 - symbol:mRpL48 "mitochondrial ribosomal p... 121 1.1e-05 1
CGD|CAL0000469 - symbol:orf19.3686 species:5476 "Candida ... 93 4.2e-05 2
UNIPROTKB|F1PWD1 - symbol:F1PWD1 "Uncharacterized protein... 116 4.5e-05 1
UNIPROTKB|Q2YDI5 - symbol:MRPL48 "39S ribosomal protein L... 111 0.00053 1
>FB|FBgn0038307 [details] [associations]
symbol:mRpS10 "mitochondrial ribosomal protein S10"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005761 "mitochondrial ribosome" evidence=ISS]
InterPro:IPR001848 PROSITE:PS00361 Pfam:PF00338 EMBL:AE014297
GO:GO:0006412 GO:GO:0003735 GO:GO:0005763 Gene3D:3.30.70.600
SUPFAM:SSF54999 CTD:55173 eggNOG:NOG264717
GeneTree:ENSGT00390000009045 OMA:DTFLEYI EMBL:AY071464
EMBL:BT001464 RefSeq:NP_524355.2 RefSeq:NP_731985.2 UniGene:Dm.2425
ProteinModelPortal:Q9VFB2 SMR:Q9VFB2 PaxDb:Q9VFB2
EnsemblMetazoa:FBtr0083054 GeneID:41838 KEGG:dme:Dmel_CG4247
FlyBase:FBgn0038307 InParanoid:Q9VFB2 OrthoDB:EOG46T1HP
PhylomeDB:Q9VFB2 GenomeRNAi:41838 NextBio:825811 Bgee:Q9VFB2
GermOnline:CG4247 Uniprot:Q9VFB2
Length = 173
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 88/157 (56%), Positives = 116/157 (73%)
Query: 7 RPLLFTDGSRRLLNGSTSTANIRHSSSVISQEKEPVPDKLYSRICCELRANDPEVMNSYS 66
+ L +T R L +TS+ ++ + S + P PDKLYS++ ELR DP V+ SY+
Sbjct: 16 KTLRWTQPMRALSTVNTSSG-VQGNLSPAAPA--PEPDKLYSKLEIELRGIDPAVLKSYT 72
Query: 67 KFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTG 126
FAT AA+HL IE G+C++ +KAHHER TLL+SVH+ K+ RVQYEVRT+FR+MNFHKLTG
Sbjct: 73 WFATTAAEHLGIEKGKCWSPRKAHHERMTLLKSVHIYKKHRVQYEVRTHFRYMNFHKLTG 132
Query: 127 STADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVPP 163
ST DTFLEYI+RNLPEGVAL+ ++ ELQ++P H P
Sbjct: 133 STLDTFLEYIERNLPEGVALQASRTELQEIPEHLRQP 169
>UNIPROTKB|I3LAB4 [details] [associations]
symbol:ATPAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0043461 "proton-transporting ATP
synthase complex assembly" evidence=IEA] InterPro:IPR011419
Pfam:PF07542 GO:GO:0005739 GO:GO:0016607 GO:GO:0043461
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013
GeneTree:ENSGT00390000009492 Ensembl:ENSSSCT00000029362 OMA:ENVSISH
Uniprot:I3LAB4
Length = 295
Score = 211 (79.3 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 52/121 (42%), Positives = 65/121 (53%)
Query: 258 RYNTSISYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRK 317
RY IS S I GPS+ + R + H SYN + G+ F V LKS+VLTL ID
Sbjct: 173 RYGVEISSSTSILGPSIPARTREALVSHLASYNMWALQGIEFVVTQLKSMVLTLGLIDLY 232
Query: 318 LSIEEAVHLSKLEEEYQ-IGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKK 376
L++E AV LS+LEEEYQ + WG + Q L AR A +VH+ ES VK
Sbjct: 233 LTVERAVLLSRLEEEYQHLAAWGLLFACLTQEAQFLAARPNAGALFVHL--CSESTTVKH 290
Query: 377 K 377
K
Sbjct: 291 K 291
Score = 199 (75.1 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 192 TEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 251
TE+ KRFY+ V I + G +EI+LDHRKLKTP LF V SE LA+A+A EWD+Q +TI+
Sbjct: 48 TER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAVAVATEWDSQQDTIK 106
Query: 252 RSTMHL 257
TMHL
Sbjct: 107 PYTMHL 112
Score = 37 (18.1 bits), Expect = 2.0e-35, Sum P(3) = 2.0e-35
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 9 LLFTDGSRRLLN 20
L DG RRLLN
Sbjct: 6 LRLRDGGRRLLN 17
>FB|FBgn0021856 [details] [associations]
symbol:l(2)k14505 "lethal (2) k14505" species:7227
"Drosophila melanogaster" [GO:0043461 "proton-transporting ATP
synthase complex assembly" evidence=IEA] InterPro:IPR011419
Pfam:PF07542 GO:GO:0043461 eggNOG:COG5387 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 EMBL:AY094758
ProteinModelPortal:Q8T3M6 SMR:Q8T3M6 STRING:Q8T3M6 PaxDb:Q8T3M6
PRIDE:Q8T3M6 FlyBase:FBgn0021856 InParanoid:Q8T3M6
OrthoDB:EOG4FFBHM ArrayExpress:Q8T3M6 Bgee:Q8T3M6 Uniprot:Q8T3M6
Length = 279
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 74/153 (48%), Positives = 101/153 (66%)
Query: 226 VLFKVSSEP-LALAIAAEWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQR 284
VLF+ E L EWD I + + RY+T++ + +I P V +D+ + +
Sbjct: 131 VLFQYDDEKDLQDLQVNEWDP---VI--AWFNQRYDTNLQKTMNITPPQVSEQDKMNVAK 185
Query: 285 HFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWA 344
HF SY+ ET+ G FAV+TLKSIVL A I++ L++E+AV L++LEEEYQ+ WGRVEWA
Sbjct: 186 HFQSYSLETLHGFIFAVDTLKSIVLACAVIEQMLTVEKAVALARLEEEYQLKFWGRVEWA 245
Query: 345 HDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
HDL QQELQARLAAA+ +VH+N N VK+K
Sbjct: 246 HDLSQQELQARLAAAVLFVHLNC--SENLVKQK 276
Score = 215 (80.7 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 42/73 (57%), Positives = 49/73 (67%)
Query: 185 SETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD 244
S T H PKRFYKK + + YE+ LDHRKLKTP G F V SEPLA+A+A E+D
Sbjct: 27 SFTVRHYASPPKRFYKKTSVASGDSGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFD 86
Query: 245 AQHETIQRSTMHL 257
AQ E I+RS MHL
Sbjct: 87 AQKENIERSRMHL 99
>UNIPROTKB|Q8N5M1 [details] [associations]
symbol:ATPAF2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:9606 "Homo sapiens" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0043461 "proton-transporting ATP
synthase complex assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR011419 Pfam:PF07542 GO:GO:0005739 GO:GO:0016607
EMBL:CH471196 GO:GO:0043461 eggNOG:COG5387 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 KO:K07556 Orphanet:254913
CTD:91647 HOGENOM:HOG000139577 HOVERGEN:HBG063751 OMA:WAEKRYG
OrthoDB:EOG46HGBF EMBL:AY203943 EMBL:AK290257 EMBL:AC087163
EMBL:BC004114 EMBL:BC032126 IPI:IPI00296999 RefSeq:NP_663729.1
UniGene:Hs.528889 ProteinModelPortal:Q8N5M1 SMR:Q8N5M1
IntAct:Q8N5M1 STRING:Q8N5M1 PhosphoSite:Q8N5M1 DMDM:73917623
PaxDb:Q8N5M1 PRIDE:Q8N5M1 DNASU:91647 Ensembl:ENST00000474627
GeneID:91647 KEGG:hsa:91647 UCSC:uc002gse.1 GeneCards:GC17M017918
HGNC:HGNC:18802 HPA:HPA023329 MIM:604273 MIM:608918
neXtProt:NX_Q8N5M1 PharmGKB:PA38686 InParanoid:Q8N5M1
GenomeRNAi:91647 NextBio:77356 ArrayExpress:Q8N5M1 Bgee:Q8N5M1
CleanEx:HS_ATPAF2 Genevestigator:Q8N5M1 GermOnline:ENSG00000171953
Uniprot:Q8N5M1
Length = 289
Score = 294 (108.6 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 71/173 (41%), Positives = 93/173 (53%)
Query: 206 ESNGDYEISLDHRKLKTPNGVLFKVSS-EPLALAIAAEWDAQHETIQRSTMHLRYNTSIS 264
+ N D I + L T + ++V E L EWD E ++ RY IS
Sbjct: 121 QRNKDQLIRAAVKFLDTDT-ICYRVEEPETLVELQRNEWDPIIEWAEK-----RYGVEIS 174
Query: 265 YSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAV 324
S I GPS+ K R + H SYN + G+ F LKS+VLTL ID +L++E+AV
Sbjct: 175 SSTSIMGPSIPAKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAV 234
Query: 325 HLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
LS+LEEEYQI WG +EWAHD QEL+AR AA ++H+ ES VK K
Sbjct: 235 LLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL--CSESTTVKHK 285
Score = 208 (78.3 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 46/98 (46%), Positives = 60/98 (61%)
Query: 168 SGSPETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 227
+G P S P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP L
Sbjct: 20 AGGPSASMSPGPTIPSPARAYAPPTER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAKL 78
Query: 228 FKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
F V SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 79 FTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSL 116
Score = 37 (18.1 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 9 LLFTDGSRRLLN 20
L DG RRLLN
Sbjct: 6 LRLRDGGRRLLN 17
>ZFIN|ZDB-GENE-040914-39 [details] [associations]
symbol:mrps10 "mitochondrial ribosomal protein S10"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 ZFIN:ZDB-GENE-040914-39 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BX890562 Gene3D:3.30.70.600 SUPFAM:SSF54999
GeneTree:ENSGT00390000009045 IPI:IPI00508899
Ensembl:ENSDART00000129590 ArrayExpress:F1QLI7 Bgee:F1QLI7
Uniprot:F1QLI7
Length = 218
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/143 (43%), Positives = 96/143 (67%)
Query: 32 SSVISQEKEPVPDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHH 91
S I++ +EP D LY R+ +++ +D V++SY FAT AA+ L + + + + K H
Sbjct: 79 SPAITESEEP--DTLYQRLSVQVKGHDRAVLDSYEFFATLAAKELGLSLEKVFEPPK-HI 135
Query: 92 ERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKY 151
++ TLL+S H+ K+ RVQYE+RT++R + ++TGS+A +LEYIQRNLPEGVA++VTK
Sbjct: 136 DKLTLLKSRHIFKKHRVQYEMRTHYRCIQISRITGSSARVYLEYIQRNLPEGVAMEVTKT 195
Query: 152 ELQKLPSHFVPPTLLESGSPETS 174
++K+P H P L + PE S
Sbjct: 196 AMEKIPEHIQKP-LWDDNKPEAS 217
>ZFIN|ZDB-GENE-050411-18 [details] [associations]
symbol:atpaf2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:7955 "Danio rerio" [GO:0043461
"proton-transporting ATP synthase complex assembly" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 ZFIN:ZDB-GENE-050411-18
GO:GO:0043461 eggNOG:COG5387 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 KO:K07556 CTD:91647 GeneTree:ENSGT00390000009492
HOGENOM:HOG000139577 HOVERGEN:HBG063751 OMA:WAEKRYG
OrthoDB:EOG46HGBF EMBL:AL844587 EMBL:BC134167 EMBL:BC153513
IPI:IPI00508946 RefSeq:NP_001076290.1 UniGene:Dr.76194
STRING:A3KP55 Ensembl:ENSDART00000078724 GeneID:560253
KEGG:dre:560253 InParanoid:A3KP55 NextBio:20883349 Uniprot:A3KP55
Length = 291
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 69/166 (41%), Positives = 99/166 (59%)
Query: 213 ISLDHRKLKTPNGVLFKVSSEPLALAIAA-EWDAQHETIQRSTMHLRYNTSISYSNDIAG 271
IS + L+T + ++V P + + EWD I++ RYN I S++I G
Sbjct: 130 ISAALKFLETDT-ICYRVEEPPGLVELQTNEWDPVMNWIEQ-----RYNVVIGSSSNIMG 183
Query: 272 PSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEE 331
P + + + T +H S+NF ++ G+ F + LKS+VL+ A IDR L++EEAV LS+LEE
Sbjct: 184 PQIPEETKETFHQHLNSFNFWSLTGLEFVINQLKSLVLSFALIDRHLNVEEAVLLSRLEE 243
Query: 332 EYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
EYQI WG VEW HD EL+AR AA +VH+++ K S VKKK
Sbjct: 244 EYQIRSWGNVEWVHDYDMYELRARTAAGALFVHLSSEKTS--VKKK 287
Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 35/71 (49%), Positives = 51/71 (71%)
Query: 188 FTHSTEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ 246
++ +T + K+FY+ V I + G +EI+LD RKLKTP+G LF V +E LA+A+A EWD Q
Sbjct: 40 YSSATAERKKFYETVSITQGEGGLFEINLDKRKLKTPSGKLFTVPNEALAIAVANEWDVQ 99
Query: 247 HETIQRSTMHL 257
+T++ TMHL
Sbjct: 100 KDTLKFYTMHL 110
>UNIPROTKB|P82664 [details] [associations]
symbol:MRPS10 "28S ribosomal protein S10, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR001848
PROSITE:PS00361 Pfam:PF00338 GO:GO:0005739 EMBL:CH471081
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL096814
Gene3D:3.30.70.600 SUPFAM:SSF54999 CTD:55173 eggNOG:NOG264717
HOGENOM:HOG000012920 HOVERGEN:HBG023133 OMA:EPDILYK
OrthoDB:EOG402WT5 EMBL:AF113220 EMBL:AK001429 EMBL:AK316599
EMBL:BC012560 IPI:IPI00061245 RefSeq:NP_060611.2 UniGene:Hs.380887
UniGene:Hs.669022 ProteinModelPortal:P82664 SMR:P82664
DIP:DIP-50902N IntAct:P82664 STRING:P82664 PhosphoSite:P82664
DMDM:20140017 PaxDb:P82664 PeptideAtlas:P82664 PRIDE:P82664
DNASU:55173 Ensembl:ENST00000053468 GeneID:55173 KEGG:hsa:55173
UCSC:uc003osa.4 GeneCards:GC06M042174 HGNC:HGNC:14502 HPA:HPA029133
HPA:HPA029134 MIM:611976 neXtProt:NX_P82664 PharmGKB:PA30993
InParanoid:P82664 PhylomeDB:P82664 ChiTaRS:MRPS10 GenomeRNAi:55173
NextBio:58963 ArrayExpress:P82664 Bgee:P82664 CleanEx:HS_MRPS10
Genevestigator:P82664 GermOnline:ENSG00000048544 Uniprot:P82664
Length = 201
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 65/130 (50%), Positives = 88/130 (67%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 69 PDILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLQSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK +L++LP H
Sbjct: 127 YKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQLPEHIKE 186
Query: 163 PTLLESGSPE 172
P + E+ S E
Sbjct: 187 P-IWETLSEE 195
>UNIPROTKB|F1RUU2 [details] [associations]
symbol:MRPS10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001848 Pfam:PF00338 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.70.600 SUPFAM:SSF54999
CTD:55173 GeneTree:ENSGT00390000009045 OMA:EPDILYK EMBL:CR956377
EMBL:CU468935 RefSeq:XP_003482233.1 UniGene:Ssc.1912
Ensembl:ENSSSCT00000001822 GeneID:100155549 KEGG:ssc:100155549
Uniprot:F1RUU2
Length = 201
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 62/121 (51%), Positives = 83/121 (68%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 69 PDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLKSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK +L++LP H
Sbjct: 127 FKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTKLEQLPEHIRK 186
Query: 163 P 163
P
Sbjct: 187 P 187
>UNIPROTKB|P82670 [details] [associations]
symbol:MRPS10 "28S ribosomal protein S10, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001848 PROSITE:PS00361 Pfam:PF00338
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.70.600 SUPFAM:SSF54999 EMBL:BC102893 IPI:IPI00689754
RefSeq:NP_001030391.1 UniGene:Bt.49208 ProteinModelPortal:P82670
STRING:P82670 PRIDE:P82670 Ensembl:ENSBTAT00000020347 GeneID:515885
KEGG:bta:515885 CTD:55173 eggNOG:NOG264717
GeneTree:ENSGT00390000009045 HOGENOM:HOG000012920
HOVERGEN:HBG023133 InParanoid:P82670 OMA:EPDILYK OrthoDB:EOG402WT5
NextBio:20872039 Uniprot:P82670
Length = 201
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 61/121 (50%), Positives = 82/121 (67%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I + +K ER+TLL+SVH+
Sbjct: 69 PDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKI--ERFTLLKSVHI 126
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTAD +LEYIQRNLPEGVA++VTK L++LP H
Sbjct: 127 FKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHIKK 186
Query: 163 P 163
P
Sbjct: 187 P 187
>MGI|MGI:1928139 [details] [associations]
symbol:Mrps10 "mitochondrial ribosomal protein S10"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001848
PROSITE:PS00361 Pfam:PF00338 MGI:MGI:1928139 GO:GO:0006412
GO:GO:0003735 GO:GO:0005763 Gene3D:3.30.70.600 SUPFAM:SSF54999
eggNOG:NOG264717 HOGENOM:HOG000012920 HOVERGEN:HBG023133
OrthoDB:EOG402WT5 EMBL:BC048912 EMBL:BC096657 IPI:IPI00895482
UniGene:Mm.216250 ProteinModelPortal:Q80ZK0 SMR:Q80ZK0
STRING:Q80ZK0 PhosphoSite:Q80ZK0 PaxDb:Q80ZK0 PRIDE:Q80ZK0
InParanoid:Q80ZK0 CleanEx:MM_MRPS10 Genevestigator:Q80ZK0
GermOnline:ENSMUSG00000034729 Uniprot:Q80ZK0
Length = 160
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 62/121 (51%), Positives = 83/121 (68%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++A+D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 28 PDTLYKRLSILVKAHDRAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLKSVHI 85
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTA +LEYIQRNLPEGVA++VTK ++Q+LP H
Sbjct: 86 FKKHRVQYEMRTLYRCLELKHLTGSTASVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 145
Query: 163 P 163
P
Sbjct: 146 P 146
>UNIPROTKB|F1PBB7 [details] [associations]
symbol:MRPS10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.70.600
SUPFAM:SSF54999 GeneTree:ENSGT00390000009045 OMA:EPDILYK
EMBL:AAEX03008328 Ensembl:ENSCAFT00000002576 Uniprot:F1PBB7
Length = 185
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 61/121 (50%), Positives = 83/121 (68%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++ +D V++SY FA AA+ L I I +K ER+TLL+SVH+
Sbjct: 53 PDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKI--ERFTLLKSVHI 110
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTGSTA+ +LEYIQRNLPEGVA++VTK +L++LP H
Sbjct: 111 FKKHRVQYEMRTLYRCLELEHLTGSTANVYLEYIQRNLPEGVAMEVTKTKLERLPEHIKE 170
Query: 163 P 163
P
Sbjct: 171 P 171
>RGD|1311516 [details] [associations]
symbol:Mrps10 "mitochondrial ribosomal protein S10"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001848 PROSITE:PS00361
Pfam:PF00338 RGD:1311516 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.70.600 SUPFAM:SSF54999 CTD:55173
eggNOG:NOG264717 GeneTree:ENSGT00390000009045 HOGENOM:HOG000012920
HOVERGEN:HBG023133 OrthoDB:EOG402WT5 EMBL:AY310148 IPI:IPI00366898
RefSeq:NP_001008859.1 UniGene:Rn.101558 ProteinModelPortal:Q7TQ82
STRING:Q7TQ82 PRIDE:Q7TQ82 Ensembl:ENSRNOT00000040204 GeneID:363187
KEGG:rno:363187 UCSC:RGD:1311516 NextBio:682765 ArrayExpress:Q7TQ82
Genevestigator:Q7TQ82 GermOnline:ENSRNOG00000022609 Uniprot:Q7TQ82
Length = 155
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/130 (48%), Positives = 88/130 (67%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++A+D V++SY FA AA+ L + I +K ER+TLL+SVH+
Sbjct: 23 PDTLYKRLSILVKAHDKAVLDSYEYFAVLAAKELGLSIKVHEPPRKI--ERFTLLKSVHI 80
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTG TA+ +LEYIQRNLPEGVA++VTK ++Q+LP H
Sbjct: 81 FKKHRVQYEMRTLYRCLELKHLTGCTANVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 140
Query: 163 PTLLESGSPE 172
P + E+ S E
Sbjct: 141 P-MWETVSGE 149
>UNIPROTKB|Q7TQ82 [details] [associations]
symbol:Mrps10 "28S ribosomal protein S10, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001848 PROSITE:PS00361 Pfam:PF00338
RGD:1311516 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.70.600 SUPFAM:SSF54999 CTD:55173 eggNOG:NOG264717
GeneTree:ENSGT00390000009045 HOGENOM:HOG000012920
HOVERGEN:HBG023133 OrthoDB:EOG402WT5 EMBL:AY310148 IPI:IPI00366898
RefSeq:NP_001008859.1 UniGene:Rn.101558 ProteinModelPortal:Q7TQ82
STRING:Q7TQ82 PRIDE:Q7TQ82 Ensembl:ENSRNOT00000040204 GeneID:363187
KEGG:rno:363187 UCSC:RGD:1311516 NextBio:682765 ArrayExpress:Q7TQ82
Genevestigator:Q7TQ82 GermOnline:ENSRNOG00000022609 Uniprot:Q7TQ82
Length = 155
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/130 (48%), Positives = 88/130 (67%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
PD LY R+ ++A+D V++SY FA AA+ L + I +K ER+TLL+SVH+
Sbjct: 23 PDTLYKRLSILVKAHDKAVLDSYEYFAVLAAKELGLSIKVHEPPRKI--ERFTLLKSVHI 80
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT +R + LTG TA+ +LEYIQRNLPEGVA++VTK ++Q+LP H
Sbjct: 81 FKKHRVQYEMRTLYRCLELKHLTGCTANVYLEYIQRNLPEGVAMEVTKTQIQQLPEHIKE 140
Query: 163 PTLLESGSPE 172
P + E+ S E
Sbjct: 141 P-MWETVSGE 149
>RGD|1305161 [details] [associations]
symbol:Atpaf2 "ATP synthase mitochondrial F1 complex assembly
factor 2" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0016607 "nuclear
speck" evidence=IEA;ISO] [GO:0043461 "proton-transporting ATP
synthase complex assembly" evidence=IEA] InterPro:IPR011419
Pfam:PF07542 RGD:1305161 GO:GO:0005739 GO:GO:0016607 EMBL:CH473948
GO:GO:0043461 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 KO:K07556 CTD:91647 GeneTree:ENSGT00390000009492
OrthoDB:EOG46HGBF IPI:IPI00369531 RefSeq:NP_001100476.1
UniGene:Rn.2167 Ensembl:ENSRNOT00000004948 GeneID:303190
KEGG:rno:303190 UCSC:RGD:1305161 NextBio:650825 Uniprot:D3ZTW7
Length = 298
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 70/173 (40%), Positives = 94/173 (54%)
Query: 206 ESNGDYEISLDHRKLKTPNGVLFKVSS-EPLALAIAAEWDAQHETIQRSTMHLRYNTSIS 264
+ N D I + L T + ++V E L EWD E ++ RY I
Sbjct: 130 QRNKDQLIRAAVKFLDTDT-ICYRVEEPETLVELQKNEWDPIIEWAEK-----RYGMEIG 183
Query: 265 YSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAV 324
S I GPS+ + R + H SYN + G+ F V LKS++LTL ID +L++E+AV
Sbjct: 184 SSTSIMGPSIPTQTREVLTSHLASYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAV 243
Query: 325 HLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
LS+LEEEYQI WG +EWAHD QEL+AR AA +VH+ ES+ VK K
Sbjct: 244 LLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHL--CSESSTVKHK 294
Score = 204 (76.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 48/100 (48%), Positives = 62/100 (62%)
Query: 169 GSPETSSVP---LKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG 225
G P S P L+ P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP
Sbjct: 30 GDPTVSLWPGPALRPP---ARAYVPPTER-KRFYQNVSISQGEGGFEINLDHRKLKTPQA 85
Query: 226 VLFKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
LF V SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 86 KLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSL 125
>MGI|MGI:2180561 [details] [associations]
symbol:Atpaf2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0043461 "proton-transporting ATP synthase complex assembly"
evidence=IEA] InterPro:IPR011419 Pfam:PF07542 MGI:MGI:2180561
GO:GO:0005739 GO:GO:0016607 GO:GO:0043461 eggNOG:COG5387
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013 KO:K07556
CTD:91647 GeneTree:ENSGT00390000009492 HOGENOM:HOG000139577
HOVERGEN:HBG063751 OrthoDB:EOG46HGBF EMBL:AK078500 EMBL:AL596090
EMBL:BC013607 IPI:IPI00990789 RefSeq:NP_663402.2 UniGene:Mm.41651
UniGene:Mm.475062 ProteinModelPortal:Q91YY4 SMR:Q91YY4
STRING:Q91YY4 PaxDb:Q91YY4 PRIDE:Q91YY4 Ensembl:ENSMUST00000108721
GeneID:246782 KEGG:mmu:246782 UCSC:uc007jfv.2 InParanoid:Q91YY4
ChiTaRS:ATPAF2 NextBio:387312 Bgee:Q91YY4 Genevestigator:Q91YY4
GermOnline:ENSMUSG00000042709 Uniprot:Q91YY4
Length = 289
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 62/136 (45%), Positives = 81/136 (59%)
Query: 242 EWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAV 301
EWD E ++ RY I S I GPS+ + R + H SYN + G+ F V
Sbjct: 157 EWDPVIEWAEK-----RYGMEIGSSTSIMGPSIPTQTREVLTSHLSSYNMWALQGIEFVV 211
Query: 302 ETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIF 361
LKS++LTL ID +L++E+AV LS+LEEEYQI WG +EWAHD QEL+AR AA
Sbjct: 212 AQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTL 271
Query: 362 YVHVNTLKESNGVKKK 377
+VH+ ES+ VK K
Sbjct: 272 FVHL--CSESSTVKHK 285
Score = 205 (77.2 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 171 PETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV 230
P S P P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP LF V
Sbjct: 23 PTVSVWPGPAPQPPARAYVPPTER-KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTV 81
Query: 231 SSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 82 PSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSL 116
>UNIPROTKB|Q1LZ96 [details] [associations]
symbol:ATPAF2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043461 "proton-transporting ATP synthase complex
assembly" evidence=IEA] InterPro:IPR011419 Pfam:PF07542
GO:GO:0005739 GO:GO:0016607 GO:GO:0043461 eggNOG:COG5387
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013 KO:K07556
EMBL:BC116131 IPI:IPI00697127 RefSeq:NP_001069091.1
UniGene:Bt.59430 ProteinModelPortal:Q1LZ96 STRING:Q1LZ96
PRIDE:Q1LZ96 Ensembl:ENSBTAT00000011594 GeneID:513521
KEGG:bta:513521 CTD:91647 GeneTree:ENSGT00390000009492
HOGENOM:HOG000139577 HOVERGEN:HBG063751 InParanoid:Q1LZ96
OMA:WAEKRYG OrthoDB:EOG46HGBF NextBio:20870892 Uniprot:Q1LZ96
Length = 289
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/153 (42%), Positives = 84/153 (54%)
Query: 226 VLFKVSS-EPLALAIAAEWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQR 284
V ++V E L EWD ++ RY I S I GPS+ + R +
Sbjct: 140 VCYRVEEPETLVELQRNEWDPVISWAEK-----RYGVEIGSSTSITGPSIPARTREVLVS 194
Query: 285 HFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWA 344
H SYN + G+ F V LKS+VLTL D +L++E+AV LS+LEEEYQI WG +EWA
Sbjct: 195 HLASYNMWALQGIEFVVTQLKSLVLTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWA 254
Query: 345 HDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
HD QEL+AR AA +VH+ ES VK K
Sbjct: 255 HDYELQELRARTAAGTLFVHL--CSESTAVKHK 285
Score = 203 (76.5 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 196 KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 255
KRFY+ V I + G +EI+LDHRKL+TP G LF V SE LA+A+A EWD+Q +TI+ TM
Sbjct: 47 KRFYQNVSISQGEGGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQDTIKMYTM 106
Query: 256 HLRY--NTSI 263
HL NTS+
Sbjct: 107 HLTTLCNTSL 116
>UNIPROTKB|F1PRK7 [details] [associations]
symbol:ATPAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043461 "proton-transporting ATP synthase
complex assembly" evidence=IEA] InterPro:IPR011419 Pfam:PF07542
GO:GO:0043461 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 GeneTree:ENSGT00390000009492 OMA:WAEKRYG
EMBL:AAEX03003718 EMBL:AAEX03003716 EMBL:AAEX03003717
Ensembl:ENSCAFT00000029226 Uniprot:F1PRK7
Length = 285
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 70/174 (40%), Positives = 94/174 (54%)
Query: 206 ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAA--EWDAQHETIQRSTMHLRYNTSI 263
+ N D I + L T + ++V EP L EWD E ++ RY+ I
Sbjct: 117 QRNKDQLIRAAVKFLDTDT-ICYRVE-EPATLVELQKNEWDPIIEWAEK-----RYDVEI 169
Query: 264 SYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEA 323
S I GPS+ + R + H SYN + G+ F V LKS+VLTL +D L++E+A
Sbjct: 170 GSSTSIMGPSIPARTREVLISHLASYNMWALQGIEFVVTQLKSMVLTLGLMDLHLTVEQA 229
Query: 324 VHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
V LS+LEEEYQI WG +EWAHD QEL+AR AA ++H+ ES VK K
Sbjct: 230 VLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL--CSESTTVKHK 281
Score = 216 (81.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/99 (46%), Positives = 62/99 (62%)
Query: 167 ESGSPETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGV 226
E +P + P + P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP
Sbjct: 18 EPATPRAAGAPFQAP---ARAYAPPTER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAK 73
Query: 227 LFKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
LF V SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 74 LFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSL 112
>UNIPROTKB|J9P3Y1 [details] [associations]
symbol:ATPAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043461 "proton-transporting ATP synthase
complex assembly" evidence=IEA] InterPro:IPR011419 Pfam:PF07542
GO:GO:0043461 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 GeneTree:ENSGT00390000009492 EMBL:AAEX03003718
EMBL:AAEX03003716 EMBL:AAEX03003717 Ensembl:ENSCAFT00000044039
Uniprot:J9P3Y1
Length = 244
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 70/174 (40%), Positives = 94/174 (54%)
Query: 206 ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAA--EWDAQHETIQRSTMHLRYNTSI 263
+ N D I + L T + ++V EP L EWD E ++ RY+ I
Sbjct: 76 QRNKDQLIRAAVKFLDTDT-ICYRVE-EPATLVELQKNEWDPIIEWAEK-----RYDVEI 128
Query: 264 SYSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEA 323
S I GPS+ + R + H SYN + G+ F V LKS+VLTL +D L++E+A
Sbjct: 129 GSSTSIMGPSIPARTREVLISHLASYNMWALQGIEFVVTQLKSMVLTLGLMDLHLTVEQA 188
Query: 324 VHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
V LS+LEEEYQI WG +EWAHD QEL+AR AA ++H+ ES VK K
Sbjct: 189 VLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL--CSESTTVKHK 240
Score = 199 (75.1 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 196 KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 255
KRFY+ V I + G +EI+LDHRKLKTP LF V SE LA+A+A EWD+Q +TI+ TM
Sbjct: 2 KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 61
Query: 256 HLRY--NTSI 263
HL NTS+
Sbjct: 62 HLTTLCNTSL 71
>UNIPROTKB|E1BUZ7 [details] [associations]
symbol:ATPAF2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043461 "proton-transporting ATP synthase
complex assembly" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 GO:GO:0005739 GO:GO:0016607
GO:GO:0043461 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 KO:K07556 CTD:91647 GeneTree:ENSGT00390000009492
OMA:WAEKRYG EMBL:AADN02023718 IPI:IPI00574302 RefSeq:XP_414815.1
UniGene:Gga.37845 Ensembl:ENSGALT00000007880 GeneID:416511
KEGG:gga:416511 NextBio:20819955 Uniprot:E1BUZ7
Length = 281
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 65/154 (42%), Positives = 89/154 (57%)
Query: 226 VLFKVSSEPLALAIAA--EWDAQHETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQ 283
V ++V EP ALA EWD ++ RYN +I S I GP++ R T
Sbjct: 132 VCYRVE-EPAALAELQKKEWDPIVAWAEK-----RYNVAIGSSTSIMGPNIPASTRDTFI 185
Query: 284 RHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEW 343
H SYN + G+ + + LKS++L++ IDR +++E+AV LS+LEEEYQI WG VEW
Sbjct: 186 SHLASYNMWALQGIEYVITQLKSLILSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEW 245
Query: 344 AHDLHQQELQARLAAAIFYVHVNTLKESNGVKKK 377
AHD EL+AR AA +VH+ ES+ VK K
Sbjct: 246 AHDYDLCELRARAAAGTLFVHL--CSESSTVKHK 277
Score = 194 (73.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 196 KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 255
KRFY+ V I + G +EI+LDHRKLKTP LF V SE LA+A+A EWD+Q +TI+ TM
Sbjct: 39 KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKDTIKFYTM 98
Query: 256 HL 257
HL
Sbjct: 99 HL 100
>UNIPROTKB|E1C1Y5 [details] [associations]
symbol:MRPS10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.70.600
SUPFAM:SSF54999 GeneTree:ENSGT00390000009045 OMA:EPDILYK
EMBL:AADN02012058 IPI:IPI00578118 Ensembl:ENSGALT00000016077
Uniprot:E1C1Y5
Length = 164
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/121 (44%), Positives = 81/121 (66%)
Query: 43 PDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHV 102
P+ LY R+ ++ +D V++SY FA AA+ L I + + + K ER TLL+SVH+
Sbjct: 30 PEVLYRRLSLLVKGHDRAVLDSYEYFAVLAAKELGITVEKVHKPPKKI-ERLTLLKSVHI 88
Query: 103 VKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHFVP 162
K+ RVQYE+RT++ + LTGSTA +LEY++RNLPEGVA++V K +++K+P H
Sbjct: 89 YKKHRVQYEMRTHYTCLELKHLTGSTAAVYLEYVERNLPEGVAMEVKKTKIEKIPEHIQE 148
Query: 163 P 163
P
Sbjct: 149 P 149
>WB|WBGene00012556 [details] [associations]
symbol:mrps-10 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009306 "protein
secretion" evidence=IMP] InterPro:IPR001848 PROSITE:PS00361
Pfam:PF00338 GO:GO:0005739 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
GO:GO:0000003 GO:GO:0009306 GO:GO:0005840 GO:GO:0003735
EMBL:AL032626 Gene3D:3.30.70.600 SUPFAM:SSF54999 eggNOG:NOG264717
GeneTree:ENSGT00390000009045 HOGENOM:HOG000012920 PIR:T26634
RefSeq:NP_499685.1 UniGene:Cel.8687 ProteinModelPortal:Q9XWV5
SMR:Q9XWV5 STRING:Q9XWV5 PaxDb:Q9XWV5 EnsemblMetazoa:Y37D8A.18
GeneID:189618 KEGG:cel:CELE_Y37D8A.18 UCSC:Y37D8A.18 CTD:189618
WormBase:Y37D8A.18 InParanoid:Q9XWV5 OMA:DTFLEYI NextBio:943030
Uniprot:Q9XWV5
Length = 156
Score = 226 (84.6 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 52/121 (42%), Positives = 68/121 (56%)
Query: 37 QEKEPVPDKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTL 96
Q + +PDKLYS + E R +D V+ SY+ F QHL I G +
Sbjct: 31 QVQAVLPDKLYSSVEIEYRGHDKAVLKSYTSFLQQVCQHLEIPQGRLEVLPYIRWVQ-PA 89
Query: 97 LRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKL 156
LRS V K+ ++ YE RT+ + +TGSTA TFLEYIQRN+PEGV ++V ELQ L
Sbjct: 90 LRSKFVHKKYKLHYETRTHISKLEILNVTGSTASTFLEYIQRNIPEGVGMRVGFTELQPL 149
Query: 157 P 157
P
Sbjct: 150 P 150
>UNIPROTKB|C9J2Q2 [details] [associations]
symbol:ATPAF2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:9606 "Homo sapiens" [GO:0043461
"proton-transporting ATP synthase complex assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR011419
Pfam:PF07542 GO:GO:0005739 GO:GO:0043461 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 HOGENOM:HOG000139577
EMBL:AC087163 HGNC:HGNC:18802 IPI:IPI00790950
ProteinModelPortal:C9J2Q2 SMR:C9J2Q2 STRING:C9J2Q2
Ensembl:ENST00000444058 ArrayExpress:C9J2Q2 Bgee:C9J2Q2
Uniprot:C9J2Q2
Length = 205
Score = 208 (78.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 46/98 (46%), Positives = 60/98 (61%)
Query: 168 SGSPETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 227
+G P S P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP L
Sbjct: 20 AGGPSASMSPGPTIPSPARAYAPPTER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAKL 78
Query: 228 FKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
F V SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 79 FTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSL 116
Score = 37 (18.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 9 LLFTDGSRRLLN 20
L DG RRLLN
Sbjct: 6 LRLRDGGRRLLN 17
>UNIPROTKB|E9PMH4 [details] [associations]
symbol:ATPAF2 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:9606 "Homo sapiens" [GO:0043461
"proton-transporting ATP synthase complex assembly" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 GO:GO:0043461 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 EMBL:AC087163 HGNC:HGNC:18802
IPI:IPI01014984 ProteinModelPortal:E9PMH4 SMR:E9PMH4
Ensembl:ENST00000302530 ArrayExpress:E9PMH4 Bgee:E9PMH4
Uniprot:E9PMH4
Length = 208
Score = 208 (78.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 46/98 (46%), Positives = 60/98 (61%)
Query: 168 SGSPETSSVPLKYPFCCSETFTHSTEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 227
+G P S P + + TE+ KRFY+ V I + G +EI+LDHRKLKTP L
Sbjct: 20 AGGPSASMSPGPTIPSPARAYAPPTER-KRFYQNVSITQGEGGFEINLDHRKLKTPQAKL 78
Query: 228 FKVSSEPLALAIAAEWDAQHETIQRSTMHLRY--NTSI 263
F V SE LA+A+A EWD+Q +TI+ TMHL NTS+
Sbjct: 79 FTVPSEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSL 116
Score = 37 (18.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 9 LLFTDGSRRLLN 20
L DG RRLLN
Sbjct: 6 LRLRDGGRRLLN 17
>TAIR|locus:2168833 [details] [associations]
symbol:AT5G40660 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0043461
"proton-transporting ATP synthase complex assembly" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 GO:GO:0005739 EMBL:CP002688
GO:GO:0043461 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 KO:K07556 OMA:WAEKRYG UniGene:At.20145
UniGene:At.7421 EMBL:AY039548 EMBL:AY142049 IPI:IPI00526894
RefSeq:NP_198882.1 ProteinModelPortal:Q94BY8 SMR:Q94BY8
IntAct:Q94BY8 STRING:Q94BY8 PRIDE:Q94BY8 EnsemblPlants:AT5G40660.1
GeneID:834066 KEGG:ath:AT5G40660 TAIR:At5g40660 InParanoid:Q94BY8
PhylomeDB:Q94BY8 ProtClustDB:CLSN2686187 Genevestigator:Q94BY8
Uniprot:Q94BY8
Length = 325
Score = 116 (45.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 265 YSNDIAGPSVDPKDRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAV 324
YS+ I G D K ++ N + ++ + SIV+ L KL I++A+
Sbjct: 222 YSS-IFGGKQDDKLVKAVEELLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAI 280
Query: 325 HLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFYV 363
L +LEE+ Q+ WG VE HD+ +L+ ++++A ++
Sbjct: 281 KLIRLEEDLQVDKWGLVEGGHDIDVADLKVQISSATVFL 319
Score = 114 (45.2 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 196 KRFYKKVGILESN-GD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQR 252
KRFYKKV E++ G+ + + LD+R LKTP+ K+ S LA AIAAEW+ Q E I+
Sbjct: 87 KRFYKKVTTREADDGNGWTVMLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIRP 146
Query: 253 STMHL 257
TM L
Sbjct: 147 FTMPL 151
>WB|WBGene00013804 [details] [associations]
symbol:Y116A8C.27 species:6239 "Caenorhabditis elegans"
[GO:0043461 "proton-transporting ATP synthase complex assembly"
evidence=IEA] InterPro:IPR011419 Pfam:PF07542 GO:GO:0043461
eggNOG:COG5387 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 KO:K07556 GeneTree:ENSGT00390000009492
EMBL:AL117204 GeneID:191004 KEGG:cel:CELE_Y116A8C.27 CTD:191004
PIR:T31500 RefSeq:NP_001255920.1 ProteinModelPortal:Q9U2U3
SMR:Q9U2U3 PaxDb:Q9U2U3 EnsemblMetazoa:Y116A8C.27a
UCSC:Y116A8C.27.1 WormBase:Y116A8C.27a HOGENOM:HOG000016022
InParanoid:Q9U2U3 OMA:ESSKLHR NextBio:947636 ArrayExpress:Q9U2U3
Uniprot:Q9U2U3
Length = 269
Score = 168 (64.2 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 278 DRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGH 337
D+ I R +NF ++G+ +A E++KS V+ I + + A+ + LE+ Q
Sbjct: 172 DKEKIDRWIRQHNFPALVGLQYATESVKSFVIAYNAIRHHIDPDTAIDAATLEQRTQAET 231
Query: 338 WGRVEWAHDLHQQELQARLAAAIFYVHVNT 367
WG VEWAH + ++EL RL+AA +V+ N+
Sbjct: 232 WGNVEWAHGIEREELMTRLSAACLFVYFNS 261
Score = 160 (61.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 194 KPKRFYKKVGIL----ESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 247
KPK+FYK+V ++ ES G+ +++ LDHR LKT G + K+ S PLALAIA EW +Q
Sbjct: 22 KPKKFYKEVSVINETDESTGNQIHKVLLDHRVLKTQGGQVLKLDSYPLALAIAEEWSSQD 81
Query: 248 ETIQRSTMHLRYNTSISYSNDIAGPSVDPKDRATIQRHFLSY-NFETVMGVN 298
E +Q M L T ++++ P D TI + L Y +TV+ N
Sbjct: 82 EFLQLGQMRL---TGLAFTAQ-DNPLEQTAD--TISQKILDYVEGDTVLFFN 127
>DICTYBASE|DDB_G0292678 [details] [associations]
symbol:atp12 "ATP synthase mitochondrial F1 complex
assembly factor 2" species:44689 "Dictyostelium discoideum"
[GO:0043461 "proton-transporting ATP synthase complex assembly"
evidence=IEA] InterPro:IPR011419 Pfam:PF07542
dictyBase:DDB_G0292678 GenomeReviews:CM000155_GR EMBL:AAFI02000194
GO:GO:0043461 eggNOG:COG5387 Gene3D:1.10.3580.10 InterPro:IPR023335
PANTHER:PTHR21013 RefSeq:XP_629566.1 ProteinModelPortal:Q54CV4
EnsemblProtists:DDB0235206 GeneID:8628826 KEGG:ddi:DDB_G0292678
InParanoid:Q54CV4 OMA:ECETHNE Uniprot:Q54CV4
Length = 330
Score = 114 (45.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 259 YNTSISYSNDIAGPSVDPKDRAT-IQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRK 317
Y S S ++ S PK+ I+RH S N ++ + ++ KS ++ L+ K
Sbjct: 216 YGIPFSISTHLS-ISKHPKELLDKIERHLHSMNNWELVCLQLISQSSKSFLVALSLYYGK 274
Query: 318 LSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIF 361
L ++ LEEEYQ WGR+ + HDL + E +A +F
Sbjct: 275 LRLDNLYQTIALEEEYQSETWGRIPFGHDLAECETHNEIAPPLF 318
Score = 94 (38.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 26/73 (35%), Positives = 41/73 (56%)
Query: 197 RFYKKVGILES---NGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 251
R+YK G+ + N D Y +D RK++TP+ + S+ +A A+AAEW AQ + I+
Sbjct: 91 RWYKTAGMCRTEPENPDQGYYPLIDERKIRTPSNHVIITPSKEIAYAVAAEWRAQEKYIK 150
Query: 252 RSTMHLRYNTSIS 264
S + + T IS
Sbjct: 151 PSRLPIT-QTIIS 162
>ASPGD|ASPL0000034424 [details] [associations]
symbol:AN9062 species:162425 "Emericella nidulans"
[GO:0033615 "mitochondrial proton-transporting ATP synthase complex
assembly" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 EMBL:BN001306 GO:GO:0043461
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013
EnsemblFungi:CADANIAT00009553 HOGENOM:HOG000186028 OMA:EDTHDVE
Uniprot:C8VH85
Length = 369
Score = 114 (45.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 37/117 (31%), Positives = 56/117 (47%)
Query: 162 PPTLLESGSPETSSVPLKYPFCCSETFTHSTEKP----KRFYKKVGILESNG-DYEISLD 216
PP S SP + SE ++P KRF+K V + + +G DY++ LD
Sbjct: 51 PPPKAPSPSPRFEKCTTQQSNTESEPQHRPRKRPTVLKKRFWKDVDVKQKDGGDYQVLLD 110
Query: 217 HRKLKTPNGVLFKVSS--EPLALAIAAEWDAQHETIQRSTMHLRYNTSISY-SNDIA 270
R ++TP+ + + S + LA AIA EWD + Q H TS++ + DIA
Sbjct: 111 KRPVRTPSKSVLSIPSTKQHLAQAIALEWDVMNAAQQALKNHTIPLTSLTARAADIA 167
Score = 95 (38.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 278 DRATIQRHFLSYNFETVMGVNFAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGH 337
D A ++R L+ ++ V E ++ ++ IEEA S LE +Q
Sbjct: 281 DLAGLERGILASK-SLLVAVRLVTEWSENFCQLQQLSRKRFGIEEAAEASSLEVRWQTDM 339
Query: 338 WGRVEWAHDLHQQELQARLAAAIFYV 363
WG VE HD+ +++L+ +L + I V
Sbjct: 340 WGEVEDTHDVDKEDLKRQLGSVIVLV 365
>UNIPROTKB|Q0C3G5 [details] [associations]
symbol:HNE_1005 "ATP12 chaperone family protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011419 Pfam:PF07542 GO:GO:0043461 eggNOG:COG5387
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013
HOGENOM:HOG000139577 OMA:WAEKRYG EMBL:CP000158
GenomeReviews:CP000158_GR RefSeq:YP_759728.1
ProteinModelPortal:Q0C3G5 STRING:Q0C3G5 GeneID:4289878
KEGG:hne:HNE_1005 PATRIC:32214817 ProtClustDB:CLSK881515
BioCyc:HNEP228405:GI69-1044-MONOMER Uniprot:Q0C3G5
Length = 242
Score = 113 (44.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/66 (40%), Positives = 35/66 (53%)
Query: 193 EKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 251
E PKRFY V + G ++I LD R +KTP L ++ +E LA +A EW Q I
Sbjct: 9 EHPKRFYTDVTAEPAEGGGWQILLDGRSVKTPGRALLRLPTEALAQEVAEEWAEQQTYIH 68
Query: 252 RSTMHL 257
MHL
Sbjct: 69 LIGMHL 74
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 299 FAVETLKSIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWA 344
FA S VL +A ++ L+ E A HLS+++E++Q WG+ E A
Sbjct: 174 FACGVFGSAVLAMALVEGALTAESAFHLSRVDEDWQAQKWGQDEEA 219
>UNIPROTKB|Q5LW25 [details] [associations]
symbol:SPO0518 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR011419
Pfam:PF07542 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0043461
Gene3D:1.10.3580.10 InterPro:IPR023335 PANTHER:PTHR21013
HOGENOM:HOG000139577 OMA:WAEKRYG ProtClustDB:CLSK881515
RefSeq:YP_165780.1 ProteinModelPortal:Q5LW25 DNASU:3192817
GeneID:3192817 KEGG:sil:SPO0518 PATRIC:23374299 Uniprot:Q5LW25
Length = 238
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 194 KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 253
KPKRF+K+ + E+ Y + LD R ++TP + + LA AIAAEWDAQ +
Sbjct: 8 KPKRFWKQAAVAETAEGYAVELDGRPVRTPAKAPLLLPTRALAEAIAAEWDAQESEVDPI 67
Query: 254 TM 255
M
Sbjct: 68 NM 69
Score = 48 (22.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 306 SIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFY 362
S+VL A +E +S+L+E +Q WG + A L + A L A Y
Sbjct: 178 SLVLGFAAALNWRKADEIWQISRLDETWQEEQWGPDDEARALAAVKRAAFLHAKAAY 234
>TIGR_CMR|SPO_0518 [details] [associations]
symbol:SPO_0518 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011419 Pfam:PF07542 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0043461 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 HOGENOM:HOG000139577
OMA:WAEKRYG ProtClustDB:CLSK881515 RefSeq:YP_165780.1
ProteinModelPortal:Q5LW25 DNASU:3192817 GeneID:3192817
KEGG:sil:SPO0518 PATRIC:23374299 Uniprot:Q5LW25
Length = 238
Score = 121 (47.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 194 KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 253
KPKRF+K+ + E+ Y + LD R ++TP + + LA AIAAEWDAQ +
Sbjct: 8 KPKRFWKQAAVAETAEGYAVELDGRPVRTPAKAPLLLPTRALAEAIAAEWDAQESEVDPI 67
Query: 254 TM 255
M
Sbjct: 68 NM 69
Score = 48 (22.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 306 SIVLTLACIDRKLSIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARLAAAIFY 362
S+VL A +E +S+L+E +Q WG + A L + A L A Y
Sbjct: 178 SLVLGFAAALNWRKADEIWQISRLDETWQEEQWGPDDEARALAAVKRAAFLHAKAAY 234
>FB|FBgn0031357 [details] [associations]
symbol:mRpL48 "mitochondrial ribosomal protein L48"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001848 Pfam:PF00338 EMBL:AE014134
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 CTD:51642
eggNOG:NOG250119 GeneTree:ENSGT00390000012955 Gene3D:3.30.70.600
SUPFAM:SSF54999 OMA:YEPDYLE EMBL:AY069759 RefSeq:NP_608613.1
UniGene:Dm.19765 STRING:Q9VQ35 EnsemblMetazoa:FBtr0077882
EnsemblMetazoa:FBtr0333542 GeneID:33348 KEGG:dme:Dmel_CG17642
UCSC:CG17642-RA FlyBase:FBgn0031357 InParanoid:Q9VQ35
OrthoDB:EOG4C2FSR GenomeRNAi:33348 NextBio:783134 Uniprot:Q9VQ35
Length = 181
Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 22 STSTANIRHSSSVISQEK-EPVPDKL--YSRICCELRANDPEVMNSYSKFATAAAQHLNI 78
+T+TA S SV + E + K Y + +++ D + SY +F A++L++
Sbjct: 18 ATTTAVRSTSGSVYEPDYLESLKPKFPQYESLNVQIKGYDYPQLESYQRFLHGLAEYLDL 77
Query: 79 EIGECYAQKKAHHERYTLLRSVHVVKRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQR 138
++ +CYA L + V++ +Y++ TY R + + + FL Q
Sbjct: 78 DVSDCYALPPQKTTVQRLRPNSTVIES---EYKLTTYERNLQLNNVDAPVYPQFLRLAQA 134
Query: 139 NLPEGVALKVTKYELQKLPSHFVP 162
LPEGV+L+V +Y +VP
Sbjct: 135 ALPEGVSLQVQEYTDDCEERRYVP 158
>CGD|CAL0000469 [details] [associations]
symbol:orf19.3686 species:5476 "Candida albicans" [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0033615 "mitochondrial
proton-transporting ATP synthase complex assembly" evidence=IEA]
InterPro:IPR011419 Pfam:PF07542 CGD:CAL0000469 EMBL:AACQ01000118
EMBL:AACQ01000119 GO:GO:0043461 eggNOG:COG5387 Gene3D:1.10.3580.10
InterPro:IPR023335 PANTHER:PTHR21013 KO:K07556 RefSeq:XP_713746.1
RefSeq:XP_713780.1 ProteinModelPortal:Q59VX2 STRING:Q59VX2
GeneID:3644568 GeneID:3644628 KEGG:cal:CaO19.11170
KEGG:cal:CaO19.3686 Uniprot:Q59VX2
Length = 403
Score = 93 (37.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 25/70 (35%), Positives = 33/70 (47%)
Query: 301 VETLKSIV-LTLACIDRKL---SIEEAVHLSKLEEEYQIGHWGRVEWAHDLHQQELQARL 356
+ETLK + ID ++EE V L LE YQ WG VE HD+ + + L
Sbjct: 334 IETLKELYQFNKNSIDEDYYHKTLEELVELGNLETIYQTEEWGEVEDTHDVDKHDWLRNL 393
Query: 357 AAAIFYVHVN 366
A+A H N
Sbjct: 394 ASAALVCHHN 403
Score = 77 (32.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 197 RFYKKVGILESNGD---YEISLDHRKLKTPNGVLFK--VSSEPLALAIAAEWDAQHET-I 250
RF+KK G ++ N + YEI LD + L+TP G + ++ + LA IA EW + +
Sbjct: 112 RFWKK-GEVKFNNETQKYEIQLDGKTLRTPLGFPLELPINKKQLAYLIAHEWTHLPDIKV 170
Query: 251 QRSTMHL 257
+ ST+ L
Sbjct: 171 KSSTLPL 177
>UNIPROTKB|F1PWD1 [details] [associations]
symbol:F1PWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001848
Pfam:PF00338 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000012955 OMA:VHNLCNH Gene3D:3.30.70.600
SUPFAM:SSF54999 EMBL:AAEX03012811 EMBL:AAEX03012812
Ensembl:ENSCAFT00000008996 Uniprot:F1PWD1
Length = 176
Score = 116 (45.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 44 DKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVV 103
D Y + L A D + SY+++ HL+I++ E YA E +LR
Sbjct: 49 DYEYGVLNIHLTAYDMALAESYAQYVHHLCNHLSIKVEESYAMPTKTME---VLRLQDQG 105
Query: 104 KRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHF-VP 162
+ + + T+ R + L+ + A+ FLE IQ NLPEGV L V ++ + F
Sbjct: 106 NKMLLDSVLTTHERVVQISGLSATFAEIFLEIIQSNLPEGVRLSVKEHTEEDFKGRFKAR 165
Query: 163 PTLLE 167
P L E
Sbjct: 166 PELEE 170
>UNIPROTKB|Q2YDI5 [details] [associations]
symbol:MRPL48 "39S ribosomal protein L48, mitochondrial"
species:9913 "Bos taurus" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001848 Pfam:PF00338 GO:GO:0006412 GO:GO:0003735
GO:GO:0005761 EMBL:BC110207 IPI:IPI00698537 RefSeq:NP_001040028.1
UniGene:Bt.52398 ProteinModelPortal:Q2YDI5
Ensembl:ENSBTAT00000045090 GeneID:615873 KEGG:bta:615873 CTD:51642
eggNOG:NOG250119 GeneTree:ENSGT00390000012955 HOGENOM:HOG000070027
HOVERGEN:HBG055302 InParanoid:Q2YDI5 OMA:VHNLCNH OrthoDB:EOG4H4652
NextBio:20899837 ArrayExpress:Q2YDI5 Gene3D:3.30.70.600
SUPFAM:SSF54999 Uniprot:Q2YDI5
Length = 212
Score = 111 (44.1 bits), Expect = 0.00053, P = 0.00053
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 44 DKLYSRICCELRANDPEVMNSYSKFATAAAQHLNIEIGECYAQKKAHHERYTLLRSVHVV 103
D Y + L A D + SY+++ HL+I++ E YA E +L+
Sbjct: 85 DYEYGTLNIHLIAYDMALTESYAQYVHNLCNHLSIKVEESYAMPTKTME---VLQLQDQG 141
Query: 104 KRCRVQYEVRTYFRWMNFHKLTGSTADTFLEYIQRNLPEGVALKVTKYELQKLPSHF-VP 162
+ + + T+ R + L + A+ FLE IQ NLPEGV L V ++ + F
Sbjct: 142 NKMLLDSVLTTHERVVQISGLNATFAEIFLEIIQSNLPEGVKLSVREHTEEDFKGRFKAR 201
Query: 163 PTLLE 167
P L E
Sbjct: 202 PELEE 206
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 380 380 0.00090 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 611 (65 KB)
Total size of DFA: 258 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.01u 0.10s 33.11t Elapsed: 00:00:05
Total cpu time: 33.02u 0.10s 33.12t Elapsed: 00:00:05
Start: Thu Aug 15 15:36:24 2013 End: Thu Aug 15 15:36:29 2013