BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9980
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7W2|NUDT8_ARATH Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2
Length = 369
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLNDKNQVLVVKEFYRKRP---QWKLPGGYVEMS 57
+T W+P++ S +P A +G G VLN +VLVV+E Y WKLP G++ S
Sbjct: 171 LTYWIPEEEPSMLPANASHQVGVGGFVLNQHKEVLVVQEKYCAPSITGLWKLPTGFINES 230
Query: 58 EDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAFGCSDIYFIVRLKPLTQEITKDDREI 117
E+I AVREV EET + TEF V+AFRH H AF SD++FI L+PL+ +I D EI
Sbjct: 231 EEIFSGAVREVKEETGVDTEFSEVIAFRHAHNVAFEKSDLFFICMLRPLSDKIIIDALEI 290
Query: 118 TESKWM 123
+KWM
Sbjct: 291 KAAKWM 296
>sp|P13420|NUDT6_XENLA Nucleoside diphosphate-linked moiety X motif 6 OS=Xenopus laevis
GN=nudt6 PE=1 SV=1
Length = 217
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIG-AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSED 59
+T WL D S++P YA +G AGAV+ D +VLVV++ + WK PGG + ED
Sbjct: 26 LTLWL-KDGPSKLPGYATHQVGVAGAVLDEDNGKVLVVQDRNKTVNAWKFPGGLSDQGED 84
Query: 60 IGEAAVREVFEETNIRTEFHSVVAFR--HTHKAAFGCSDIYFIVRLKPLTQEITKDDREI 117
IG AVREV EET I +EF S+++ R H H AFG SD+Y I RLKPL+ I +E
Sbjct: 85 IGATAVREVLEETGIHSEFKSLLSIRQQHNHPGAFGKSDLYIICRLKPLSYTINFCHQEC 144
Query: 118 TESKWMD 124
+ +WMD
Sbjct: 145 LKCEWMD 151
>sp|P53370|NUDT6_HUMAN Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens
GN=NUDT6 PE=1 SV=2
Length = 316
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIG-AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSED 59
+T WL + SR+P YA +G AGAV ++LVV++ + + WK PGG E ED
Sbjct: 125 LTLWL-REGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEED 183
Query: 60 IGEAAVREVFEETNIRTEFHSVVAFR--HTHKAAFGCSDIYFIVRLKPLTQEITKDDREI 117
IG+ AVREVFEET I++EF SV++ R HT+ AFG SD+Y I RLKP + I E
Sbjct: 184 IGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEEC 243
Query: 118 TESKWMD 124
+WMD
Sbjct: 244 LRCEWMD 250
>sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2 OS=Arabidopsis thaliana GN=NUDT2 PE=1 SV=1
Length = 278
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 4/126 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLNDKNQVLVVKE---FYRKRPQWKLPGGYVEMS 57
+ W+P + ++ N +H +G GA V+N +VLVV+E ++ + WK P G V
Sbjct: 94 LVYWIPKEDDTLPANASHR-VGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEG 152
Query: 58 EDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAFGCSDIYFIVRLKPLTQEITKDDREI 117
EDI + +VREV EET + TEF ++AFR THKA FG SD++F+ LKPL+ EI + EI
Sbjct: 153 EDIHDGSVREVKEETGVDTEFDQILAFRQTHKAFFGKSDLFFVCMLKPLSLEINAQESEI 212
Query: 118 TESKWM 123
++WM
Sbjct: 213 EAAQWM 218
>sp|P70563|NUDT6_RAT Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus
GN=Nudt6 PE=1 SV=1
Length = 313
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIG-AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSED 59
+T WL + SR+P YA +G AGAV +VLVV++ + + WK PGG E ED
Sbjct: 122 LTLWL-GEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQDRNKLKNMWKFPGGLSEPGED 180
Query: 60 IGEAAVREVFEETNIRTEFHSVVAFRHTHKA--AFGCSDIYFIVRLKPLTQEITKDDREI 117
IG+ AVREVFEET +++EF S+++ R H++ AFG SD+Y I RL+P + I +E
Sbjct: 181 IGDTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLICRLQPRSFTINFCQQEC 240
Query: 118 TESKWMD 124
+ +WMD
Sbjct: 241 LKCEWMD 247
>sp|Q8CH40|NUDT6_MOUSE Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus
GN=Nudt6 PE=2 SV=1
Length = 313
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIG-AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSED 59
+T WL + SR+P YA +G AGAV +VLVV++ + + WK PGG E ED
Sbjct: 122 LTLWL-GEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQDRNKLKNMWKFPGGLSEPGED 180
Query: 60 IGEAAVREVFEETNIRTEFHSVVAFRHTHKA--AFGCSDIYFIVRLKPLTQEITKDDREI 117
I + AVREVFEET +++EF S+++ R H++ AFG SD+Y + RL+P + I +E
Sbjct: 181 IADTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLVCRLQPRSFTINFCQQEC 240
Query: 118 TESKWMD 124
+ +W+D
Sbjct: 241 LKCEWID 247
>sp|Q9SJC4|NUDT6_ARATH Nudix hydrolase 6 OS=Arabidopsis thaliana GN=NUDT6 PE=1 SV=1
Length = 283
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 6/128 (4%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLNDKN-QVLVVKEF---YRKRPQWKLPGGYVEM 56
+T W+ D S +P A IG GA VLN K +VLVV+E ++ WKLP G V+
Sbjct: 85 LTSWIAD-VPSTLPANASHRIGVGAFVLNKKTKEVLVVQEIDGHFKGTGVWKLPTGVVKE 143
Query: 57 SEDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAFGC-SDIYFIVRLKPLTQEITKDDR 115
E+I E A+REV EET I+T+F V+AFR +H+A +DI+F+ L+P T EI K D
Sbjct: 144 GENIWEGALREVEEETGIKTKFVEVLAFRESHQAFLEIKTDIFFLCELEPTTFEIKKQDS 203
Query: 116 EITESKWM 123
EI +KWM
Sbjct: 204 EILAAKWM 211
>sp|Q9SJC6|NUDT5_ARATH Nudix hydrolase 5 OS=Arabidopsis thaliana GN=NUDT5 PE=2 SV=3
Length = 302
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLNDKNQVLVVKE---FYRKRPQWKLPGGYVEMS 57
+T WLP+ S +P A IG GA VLN ++LVV+E +++ + WK+P G ++
Sbjct: 106 LTFWLPE-PPSTLPCNASHRIGIGAFVLNKNGEMLVVQENSGYFKDKNVWKVPTGTIKEG 164
Query: 58 EDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAFG-CSDIYFIVRLKPLTQEITKDDRE 116
E I AVREV EET+I EF V++F +H+A + +DI+F+ L+ T EI K D E
Sbjct: 165 ESIWAGAVREVKEETDIDAEFVEVLSFMESHQAVWQRKTDIFFVCELEARTFEIQKQDSE 224
Query: 117 ITESKWM 123
I +KWM
Sbjct: 225 IHAAKWM 231
>sp|Q9SU14|NUDT7_ARATH Nudix hydrolase 7 OS=Arabidopsis thaliana GN=NUDT7 PE=1 SV=1
Length = 282
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 78/128 (60%), Gaps = 6/128 (4%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLN-DKNQVLVVKE---FYRKRPQWKLPGGYVEM 56
+ W+ + ++ IP A ++GAGA+V+N + +VLVV+E F++ + WKLP G +
Sbjct: 85 LVSWISETPDT-IPANASHVVGAGALVINKNTKEVLVVQERSGFFKDKNVWKLPTGVINE 143
Query: 57 SEDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAF-GCSDIYFIVRLKPLTQEITKDDR 115
EDI REV EET I +F V+AFR +HKA +D++F+ L P + +IT+
Sbjct: 144 GEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFLCVLSPRSYDITEQKS 203
Query: 116 EITESKWM 123
EI ++KWM
Sbjct: 204 EILQAKWM 211
>sp|Q6NPD7|NUD10_ARATH Nudix hydrolase 10 OS=Arabidopsis thaliana GN=NUDT10 PE=1 SV=1
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 1 MTKWLPDDSESRIPNYAHTMIGAGAVVLNDKNQVLVVKEFYRKRPQ---WKLPGGYVEMS 57
+ W+P+ +ES IP A + GAVVLN + E Y WK+P G V+
Sbjct: 94 LVYWIPE-AESTIPLNASHRVRVGAVVLNHNKE-----EKYGSLCGSGIWKIPTGVVDEG 147
Query: 58 EDIGEAAVREVFEETNIRTEFHSVVAFRHTHKAAFGCSDIYFIVRLKPLTQEITKDDREI 117
E+I AA+REV EET I TEF ++AF TH++ F SD++F+ L+P + +I K D EI
Sbjct: 148 EEIFAAAIREVKEETGIDTEFLEILAFCQTHESFFAKSDLFFVCLLRPTSFDIQKQDLEI 207
Query: 118 TESKWM 123
++WM
Sbjct: 208 EAAQWM 213
>sp|P96590|MUTT_BACSU Putative 8-oxo-dGTP diphosphatase OS=Bacillus subtilis (strain
168) GN=mutT PE=3 SV=1
Length = 149
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 22 GAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSV 81
GA +VLN+ Q+L+VK + P W LPGG V+ E EAAVRE+ EET +
Sbjct: 5 GAFVIVLNESQQILLVKR--KDVPLWDLPGGRVDPGESAEEAAVREILEETGYNAALSAK 62
Query: 82 VAFRHTHK 89
+ K
Sbjct: 63 IGVYQRPK 70
>sp|Q4FP40|RPPH_PELUB RNA pyrophosphohydrolase OS=Pelagibacter ubique (strain HTCC1062)
GN=rppH PE=3 SV=1
Length = 158
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 22 GAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRT----- 76
G G VVLN N+V V K ++ W++P G V+ ED AA RE+ EET+I+
Sbjct: 13 GVGIVVLNKDNKVFVAKRIDNQKNFWQMPQGGVDKGEDYLTAAYRELEEETSIKNVELIK 72
Query: 77 EFHSVVAFRHTH-------KAAF-GCSDIYFIVRLKPLTQEITKDDR--EITESKWMD 124
E ++++ K + G +FI+R EI + E +E KW+D
Sbjct: 73 ECDGLISYELPKNLLGIIWKGKYRGQEQKWFIMRFLGQDNEIDIKTKHPEFSEWKWID 130
>sp|A1AX38|RPPH_RUTMC RNA pyrophosphohydrolase OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=rppH PE=3 SV=1
Length = 179
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 22 GAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSV 81
G V+ NDK QVL+ K K+ W+LP G ++ E +A RE+ EE + E S+
Sbjct: 10 NVGIVITNDKQQVLLAKRL--KQDSWQLPQGGIDFGESELDALFRELNEEIGLSFEHISI 67
Query: 82 VA--------------FRHTHK-AAFGCSDIYFIVRL 103
+A +H K G ++F++RL
Sbjct: 68 LAKTPKWLRYDFPDYHIKHKQKPVCIGQKQVWFLLRL 104
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 22 GAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSV 81
G +V++++ +VL++K W LP G+VE E + EA VRE+ EET ++ E +
Sbjct: 277 GVAGIVMDERGRVLLMKR--ADNGCWGLPSGHVERGESVEEAIVREIREETGLQVEVMRL 334
Query: 82 VAF 84
V
Sbjct: 335 VGL 337
>sp|O05437|MUTT4_MYCTU Putative mutator protein MutT4 OS=Mycobacterium tuberculosis
GN=mutT4 PE=2 SV=1
Length = 248
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 34 VLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA---------F 84
L+ + R R W LP G++E+ E + A+REV EET IR + +
Sbjct: 85 ALIGRVDRRGRLLWSLPKGHIELGETAEQTAIREVAEETGIRGSVLAALGRIDYWFVTDG 144
Query: 85 RHTHKAAFGCSDIYFIVRLKPLTQEITKDDREITESKWM 123
R HK ++++R L E++ +D E+ E W+
Sbjct: 145 RRVHKTVH-----HYLMRF--LGGELSDEDLEVAEVAWV 176
>sp|Q3U2V3|NUD18_MOUSE 8-oxo-dGDP phosphatase NUDT18 OS=Mus musculus GN=Nudt18 PE=2 SV=1
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 25 AVVLNDKNQVLVVKEFYRK-RPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
AV LN++++VL+++E R+ R W LP G +E E I EA REV EE + E ++++
Sbjct: 48 AVFLNEQDEVLMIQEAKRECRGTWYLPAGRMEPGETIVEAMQREVKEEAGLLCEPVTLLS 107
Query: 84 FRHTHKAAFGCSDIYFIVRLKPL--TQEITKD-DREITESKW 122
G S I F+ +P + +KD D E ++ W
Sbjct: 108 VEER-----GASWIRFVFLARPTGGVLKTSKDADSESLQAGW 144
>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain
ATCC 33942 / OCh 114) GN=rppH PE=3 SV=1
Length = 160
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 24 GAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
G +++N + +V V + W++P G VE ED AA+RE++EET + E VVA
Sbjct: 16 GVMLMNGQGEVFVGQRRDNNVAAWQMPQGGVEKGEDPRAAALRELWEETGVNPELAEVVA 75
>sp|Q6ZVK8|NUD18_HUMAN 8-oxo-dGDP phosphatase NUDT18 OS=Homo sapiens GN=NUDT18 PE=1 SV=3
Length = 323
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 25 AVVLNDKNQVLVVKEFYRK-RPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
AV L+++++VL+++E R+ R W LP G +E E I EA REV EE + E ++++
Sbjct: 48 AVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLS 107
Query: 84 FRHTHKAAFGCSDIYFIVRLKPLTQEITKDDRE 116
G S + F+ +P T I K +E
Sbjct: 108 VEER-----GPSWVRFVFLARP-TGGILKTSKE 134
>sp|Q568Q0|NUD18_DANRE 8-oxo-dGDP phosphatase NUDT18 OS=Danio rerio GN=nudt18 PE=2 SV=1
Length = 325
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 24 GAVVLNDKNQVLVVKEFYRK-RPQWKLPGGYVEMSEDIGEAAVREVFEETNI 74
GAV+ N K +VL+V+E R+ +W LP G +E E I EA REV EE I
Sbjct: 44 GAVIFNSKEEVLMVQEAKRECYGRWYLPAGRMEECESILEALQREVREEAGI 95
>sp|Q641Y7|NUD18_RAT 8-oxo-dGDP phosphatase NUDT18 OS=Rattus norvegicus GN=Nudt18 PE=2
SV=2
Length = 323
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 25 AVVLNDKNQVLVVKEFYRK-RPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
AV LN++++VL+++E R+ R W LP G +E E I EA REV EE + E ++++
Sbjct: 48 AVFLNEQDEVLMIQEAKRECRGTWYLPAGRMEPGETIVEAMQREVKEEAGLLCEPVTLLS 107
Query: 84 FRHTHKAAFGCSDIYFIVRLKPLTQEITKD----DREITESKW 122
G S I F+ +P T + K D E ++ W
Sbjct: 108 VEER-----GASWIRFVFLARP-TGGVLKTSKNADSESLQAGW 144
>sp|Q58549|ADPP_METJA ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=nudF PE=1 SV=1
Length = 169
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 16 YAHTMIGAGAVVLNDKNQVLVVKEFYRKRPQWK----LPGGYVEMSEDIGEAAVREVFEE 71
Y H + ++ D N++L++K RK +K LPGG+VE E + EA VRE+ EE
Sbjct: 38 YLHPAVAVDGIIEKD-NKILLIK---RKNNPFKGCFALPGGFVECGETVEEAVVREIKEE 93
Query: 72 TNIRTEFHSVVA 83
T + + S++
Sbjct: 94 TGLIPKVKSLLG 105
>sp|P32091|MUTT_STRAM MutT-like protein OS=Streptomyces ambofaciens PE=3 SV=1
Length = 154
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 18 HTMIGAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
H++ AG VV D ++L ++ W+LPGG +E+ E REV+EET IR E
Sbjct: 17 HSVSVAGVVVRED-GRLLAIRRA--DNGTWELPGGVLELDETPETGVAREVWEETGIRVE 73
Query: 78 FHSVVA-FRHTHKAAFGCSDIYFIVRLKPLTQEITKDDREITESKWM 123
+ +++T + + + R KP + + + E T W+
Sbjct: 74 VDELTGVYKNTTRGI-----VALVFRCKP-SGGVERTSSESTAVSWL 114
>sp|Q3Z2Y5|NUDJ_SHISS Phosphatase NudJ OS=Shigella sonnei (strain Ss046) GN=nudJ PE=3
SV=1
Length = 153
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q31ZL0|NUDJ_SHIBS Phosphatase NudJ OS=Shigella boydii serotype 4 (strain Sb227)
GN=nudJ PE=3 SV=1
Length = 153
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|P0AEI9|NUDJ_SHIFL Phosphatase NudJ OS=Shigella flexneri GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q0T5N8|NUDJ_SHIF8 Phosphatase NudJ OS=Shigella flexneri serotype 5b (strain 8401)
GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q32EZ2|NUDJ_SHIDS Phosphatase NudJ OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q1RD19|NUDJ_ECOUT Phosphatase NudJ OS=Escherichia coli (strain UTI89 / UPEC)
GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|B1LI09|NUDJ_ECOSM Phosphatase NudJ OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|P0AEI6|NUDJ_ECOLI Phosphatase NudJ OS=Escherichia coli (strain K12) GN=nudJ PE=1
SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|B1IUD3|NUDJ_ECOLC Phosphatase NudJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576
/ Crooks) GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|P0AEI7|NUDJ_ECOL6 Phosphatase NudJ OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q0TIT9|NUDJ_ECOL5 Phosphatase NudJ OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|A1AA28|NUDJ_ECOK1 Phosphatase NudJ OS=Escherichia coli O1:K1 / APEC GN=nudJ PE=1
SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|A7ZZ89|NUDJ_ECOHS Phosphatase NudJ OS=Escherichia coli O9:H4 (strain HS) GN=nudJ
PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|B1XA44|NUDJ_ECODH Phosphatase NudJ OS=Escherichia coli (strain K12 / DH10B) GN=nudJ
PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|P0AEI8|NUDJ_ECO57 Phosphatase NudJ OS=Escherichia coli O157:H7 GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|A7ZKS4|NUDJ_ECO24 Phosphatase NudJ OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=nudJ PE=3 SV=1
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 25 AVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTE 77
A V++ + + LVV+E + W P G++E E + EAA RE++EET I +
Sbjct: 9 ACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61
>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
Length = 161
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 24 GAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
G V++N V V + + W++P G V+ ED EAA+RE++EET + + +VA
Sbjct: 16 GVVLMNGDGFVFVGQRMDQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADLVEMVA 75
>sp|A1B502|RPPH_PARDP RNA pyrophosphohydrolase OS=Paracoccus denitrificans (strain Pd
1222) GN=rppH PE=3 SV=1
Length = 163
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 23 AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVV 82
AG V++N V + P W++P G ++ E EAA+RE+ EET + + V+
Sbjct: 17 AGVVLINPVGLVFAGQRIDNPGPAWQMPQGGIDRGESPREAALRELVEETGVTPDLVDVL 76
Query: 83 A 83
A
Sbjct: 77 A 77
>sp|O62255|DCP2_CAEEL mRNA-decapping enzyme 2 OS=Caenorhabditis elegans GN=dcap-2 PE=2
SV=4
Length = 786
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 16 YAHTMIGAGAVVLN-DKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEET 72
Y T+ GA++++ + + V++V+ ++ K W P G + +E +AA+RE FEET
Sbjct: 236 YKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNWGFPKGKINQAEPPRDAAIRETFEET 293
>sp|O45830|NDX1_CAEEL Putative nudix hydrolase 1 OS=Caenorhabditis elegans GN=ndx-1 PE=3
SV=1
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 23 AGAVVL---NDKNQVLVVKEFYRK-RPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEF 78
A A++L D +VL+++E + R +W +P G VE E I EA VREV EET +
Sbjct: 76 AAAIILRNQGDDTEVLLIQEAKKSCRGKWYMPAGRVEAGETIEEAVVREVKEETGYSCDV 135
Query: 79 HSVVAFRHT----HKAAFGCS 95
+++ + ++ AF C+
Sbjct: 136 VELLSLQVQGSGWYRYAFYCN 156
>sp|C0SPC3|YJHB_BACSU Putative ADP-ribose pyrophosphatase YjhB OS=Bacillus subtilis
(strain 168) GN=yjhB PE=3 SV=1
Length = 208
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 31 KNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVAFRHTHK 89
+NQ+L+V+E + + W LPGG+ E+ E V+E+ EE+ TE ++A +HK
Sbjct: 81 ENQILLVREKHDEL--WSLPGGFCEIGLSPAENVVKEIKEESGYDTEPSRLLAVLDSHK 137
>sp|A8LKJ8|RPPH_DINSH RNA pyrophosphohydrolase OS=Dinoroseobacter shibae (strain DFL
12) GN=rppH PE=3 SV=1
Length = 160
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 24 GAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVA 83
G V+ + +V + + + P W++P G +E ED AA+RE+ EET + E V+A
Sbjct: 16 GVVLWDGAGRVFTGQRYDSELPAWQMPQGGIEDGEDARTAALRELVEETGVAVEKVEVLA 75
>sp|P93740|NUD23_ARATH Nudix hydrolase 23, chloroplastic OS=Arabidopsis thaliana GN=NUDT23
PE=1 SV=2
Length = 280
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 16 YAHTMIGAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIR 75
Y + + G ++ ++ +L + W LP GY+E+ E + A+RE +EE
Sbjct: 118 YQNPKMVVGCLIEHEGKVLLCKRNIQPSHGLWTLPAGYLEVGESAAQGAMRETWEEAGAT 177
Query: 76 TEFHSVVAFRHTHKAAFGCSDIYFIVRLKPL 106
E + F G + + F+ +LK L
Sbjct: 178 VEV--ISPFAQLDIPLIGQTYVIFLAKLKNL 206
>sp|Q1GSV9|RPPH_SPHAL RNA pyrophosphohydrolase OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=rppH PE=3 SV=1
Length = 158
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 23 AGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVV 82
AG ++ N +V V + W++P G ++ ED +AA+RE+ EET I ++
Sbjct: 13 AGVMLANRDGRVFVGQRLDTSSEAWQMPQGGIDEGEDAEKAAIRELGEETGIHGGLVDII 72
Query: 83 A 83
A
Sbjct: 73 A 73
>sp|Q92LA8|RPPH_RHIME RNA pyrophosphohydrolase OS=Rhizobium meliloti (strain 1021)
GN=rppH PE=3 SV=1
Length = 167
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 24 GAVVLNDK------NQVLVVKEFYRKRPQ-WKLPGGYVEMSEDIGEAAVREVFEETNIRT 76
G +VLN + +++ V Y PQ W++P G ++ ED EAA RE++EET IR+
Sbjct: 13 GVMVLNRQGLVWAGHRLAVGNSEYDGSPQLWQMPQGGIDEGEDPLEAACRELYEETGIRS 72
>sp|Q5RAF0|NUDT4_PONAB Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Pongo
abelii GN=NUDT4 PE=2 SV=1
Length = 180
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 31 KNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVAF 84
+++VL+V R QW +PGG +E E+ G AAVREV+EE ++ + ++
Sbjct: 31 EDEVLLVSS-SRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGI 83
>sp|Q9NZJ9|NUDT4_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Homo
sapiens GN=NUDT4 PE=1 SV=2
Length = 180
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 31 KNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNIRTEFHSVVAF 84
+++VL+V R QW +PGG +E E+ G AAVREV+EE ++ + ++
Sbjct: 31 EDEVLLVSS-SRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGI 83
>sp|C4K4A2|RPPH_HAMD5 RNA pyrophosphohydrolase OS=Hamiltonella defensa subsp.
Acyrthosiphon pisum (strain 5AT) GN=rppH PE=3 SV=1
Length = 163
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 21 IGAGAVVLNDKNQVLVVKEFYRKRPQWKLPGGYVEMSEDIGEAAVREVFEETNI 74
+ G V+ N K QVL K + + W+ P G + ++E EA RE+FEE +
Sbjct: 9 LNVGIVICNKKGQVLWAKRY--GQYSWQFPQGGIHLTESPEEAMYRELFEELGL 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,053,444
Number of Sequences: 539616
Number of extensions: 1688130
Number of successful extensions: 4141
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 3843
Number of HSP's gapped (non-prelim): 487
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)