RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9997
(330 letters)
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 117 bits (292), Expect = 2e-32
Identities = 124/146 (84%), Positives = 130/146 (89%)
Query: 185 NPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 244
G LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC
Sbjct: 46 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 105
Query: 245 QKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGL 304
KTPFLLVGTQIDLR+D T+EKLAKNKQKPI+ E EKLA++LKAVKYVECSALTQKGL
Sbjct: 106 PKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGL 165
Query: 305 KNVFDEAILAALEPPEPPKKRKCVLL 330
KNVFDEAILAALEPPEP K R+CVLL
Sbjct: 166 KNVFDEAILAALEPPEPKKSRRCVLL 191
Score = 86.6 bits (213), Expect = 6e-21
Identities = 82/105 (78%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 121 QEDYDRLRPLSYPQTDVFLVCFG--NMMNIRRSVDWNRKLGGWFW 163
QEDYDRLRPLSYPQTDVFLVCF + + +
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 105
Score = 75.4 bits (184), Expect = 8e-17
Identities = 53/53 (100%), Positives = 53/53 (100%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 98.7 bits (245), Expect = 1e-25
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 122
+K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L ++DTAGQE
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 123 DYDRLRPLSYPQTDVFLVCF 142
+ + Y ++ +
Sbjct: 63 RFRTITTAYYRGAMGIILVY 82
Score = 80.2 bits (197), Expect = 8e-19
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 18/152 (11%)
Query: 165 ISTEHSPPMKLHTLGFITNINPGWVRDRS----LFDTAGQEDYDRLRPLSYPQTDVFLVC 220
+ P + T+G I + + ++DTAGQE + + Y ++
Sbjct: 22 FVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILV 81
Query: 221 FSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQ 280
+ + +F N+K+ + H + LLVG + D+ + ++ +Q
Sbjct: 82 YDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-------------TRVVTADQ 128
Query: 281 GEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
GE LAKEL + ++E SA + +F
Sbjct: 129 GEALAKELG-IPFIESSAKNDDNVNEIFFTLA 159
Score = 60.9 bits (147), Expect = 6e-12
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGL 55
+K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L +
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQI 55
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 98.0 bits (243), Expect = 4e-25
Identities = 23/111 (20%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 122
K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
+ + Y + ++ + + + S + + +T +
Sbjct: 67 RFRTITSSYYRGSHGIIIVY--DVTDQESFNGVKMWLQEIDRYATSTVLKL 115
Score = 66.4 bits (161), Expect = 1e-13
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 13/133 (9%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + + Y + ++ + V SF VK + LLVG
Sbjct: 59 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVG 118
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+ DL++ +AK + ++E SAL +++ F
Sbjct: 119 NKCDLKDKRVVEYDVAKEFADAN-------------KMPFLETSALDSTNVEDAFLTMAR 165
Query: 314 AALEPPEPPKKRK 326
E +
Sbjct: 166 QIKESMSQQNLNE 178
Score = 60.6 bits (146), Expect = 1e-11
Identities = 14/53 (26%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGL 55
K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ + TV + G+ L +
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 59
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 97.0 bits (240), Expect = 8e-25
Identities = 90/134 (67%), Positives = 105/134 (78%)
Query: 185 NPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 244
G L+DTAGQEDYDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ +
Sbjct: 52 VGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA 111
Query: 245 QKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGL 304
PFLL+GTQIDLR+D TL +L K+KPI EQG+KLAKE+ A YVECSALTQKGL
Sbjct: 112 PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGL 171
Query: 305 KNVFDEAILAALEP 318
K VFDEAI+A L P
Sbjct: 172 KTVFDEAIIAILTP 185
Score = 70.0 bits (170), Expect = 6e-15
Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 5/118 (4%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
+KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTAGQ
Sbjct: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
EDYDRLRPLSYP TDVFL+CF + + E++P + +G
Sbjct: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKE-----EWVPELKEYAPNVPFLLIG 120
Score = 59.6 bits (143), Expect = 2e-11
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
+KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y
Sbjct: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQY 57
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 95.6 bits (237), Expect = 2e-24
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 122
K V++G+ VGKTCL+ +T FP T+ D TV I GE L ++DTAGQE
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFW 163
+ + Y + ++ + +
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQY 106
Score = 71.4 bits (174), Expect = 1e-15
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + + Y + ++ + + SF + E + K +LVG
Sbjct: 58 IWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 117
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+IDL E ++ A+ E + + Y+E SA ++ +F +
Sbjct: 118 NKIDLAERREVSQQRAEEF-------------SEAQDMYYLETSAKESDNVEKLFLDLAC 164
Query: 314 AALE 317
+
Sbjct: 165 RLIS 168
Score = 61.7 bits (149), Expect = 3e-12
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGL 55
K V++G+ VGKTCL+ +T FP T+ D TV I GE L +
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 58
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 95.8 bits (237), Expect = 2e-24
Identities = 87/126 (69%), Positives = 105/126 (83%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
L+DTAGQEDYDRLRPLSYPQTDV L+CFS+VSP+SFENV+ KW PE+ HHC TP +LVG
Sbjct: 57 LWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVG 116
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
T++DLR+D T+EKL + K PI++ QG +AKE+ AVKY+ECSALTQ+GLK VFDEAI
Sbjct: 117 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 176
Query: 314 AALEPP 319
A L PP
Sbjct: 177 AVLCPP 182
Score = 73.1 bits (178), Expect = 4e-16
Identities = 69/118 (58%), Positives = 81/118 (68%), Gaps = 5/118 (4%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
Q IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQ
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
EDYDRLRPLSYPQTDV L+CF + + ++ H P + +G
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPAS-----FENVRAKWYPEVRHHCPNTPIILVG 116
Score = 62.3 bits (150), Expect = 3e-12
Identities = 43/85 (50%), Positives = 51/85 (60%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTM 61
Q IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTN 86
+ + L+ +
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVS 88
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 92.5 bits (229), Expect = 3e-23
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 122
K +++GD VGKTC+L ++ + F S ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 123 DYDRLRPLSYPQTDVFLVCF 142
+ + Y ++ +
Sbjct: 67 RFRTITTAYYRGAMGIMLVY 86
Score = 73.3 bits (179), Expect = 3e-16
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + + Y ++ + + + SF+N++ H +++G
Sbjct: 59 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 118
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
+ D N ++ +S E+GEKLA + +K++E SA ++N F
Sbjct: 119 NKCD------------VNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLA 164
Score = 60.2 bits (145), Expect = 1e-11
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGL 55
K +++GD VGKTC+L ++ + F S ++ T+ ++ + T+ + G+ L +
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 59
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 90.5 bits (223), Expect = 2e-22
Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 200 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLR 259
YD +RPLSYP +D L+CF + P + ++V +KW EI C T LLVG + DLR
Sbjct: 60 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR 119
Query: 260 EDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALT-QKGLKNVFDEAILAAL 316
D TL +L+ ++Q P+S++QG +AK++ A Y+ECSAL + ++++F A LA +
Sbjct: 120 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 177
Score = 65.8 bits (159), Expect = 1e-13
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
K VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+G
Sbjct: 3 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 124 YDRLRPLSYPQTDVFLVCFG--NMMNIRRSVDWNRKLGGWFW 163
YD +RPLSYP +D L+CF + + + F
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC 104
Score = 58.1 bits (139), Expect = 7e-11
Identities = 22/48 (45%), Positives = 27/48 (56%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
K VVVGD GKT LL + + FP YVPTVF+NY + I +
Sbjct: 3 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRI 50
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 86.9 bits (214), Expect = 3e-21
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 123
K +++G+ +VGKT L Y + F +V TV ++ V T+ + L ++DTAGQE
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEH 169
Y + Y F++ + + + +
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQ 112
Score = 69.9 bits (170), Expect = 5e-15
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE Y + Y F++ + + + SF V++ T+ LLVG
Sbjct: 58 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVG 117
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
K ++ +S E+G +LA L ++ E SA +K F+ +
Sbjct: 118 N------------KCDMEDERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVD 164
Query: 314 AALE 317
E
Sbjct: 165 VICE 168
Score = 48.7 bits (115), Expect = 1e-07
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGL 55
K +++G+ +VGKT L Y + F +V TV ++ V T+ + L +
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 58
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 86.6 bits (213), Expect = 4e-21
Identities = 67/123 (54%), Positives = 86/123 (69%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGT 254
+DTAG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H C P +LVG
Sbjct: 55 WDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 114
Query: 255 QIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILA 314
+ DLR D T +LAK KQ+P+ E+G +A + A Y+ECSA T+ G++ VF+ A A
Sbjct: 115 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 174
Query: 315 ALE 317
AL+
Sbjct: 175 ALQ 177
Score = 72.7 bits (177), Expect = 5e-16
Identities = 49/84 (58%), Positives = 59/84 (70%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
K V+VGDGA GKTCLLI + ++FP YVPTVF+NY + + G+ L L+DTAG ED
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMN 147
YDRLRPLSYP TDV L+CF
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSP 86
Score = 61.2 bits (147), Expect = 7e-12
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
K V+VGDGA GKTCLLI + ++FP YVPTVF+NY + + G+ L
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVEL 52
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 86.5 bits (213), Expect = 6e-21
Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI-----------GGEPYT 112
IK + +GD VGKT L YT NKF +++ TV ++ ++
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 113 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPP 172
L L+DTAGQE + L + FL+ F N + +
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNW----MSQLQANAYCEN 121
Query: 173 MKLHTLGFITNINPGW 188
+ +G ++
Sbjct: 122 PDIVLIGNKADLPDQR 137
Score = 68.4 bits (166), Expect = 2e-14
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLVG 253
+DTAGQE + L + FL+ F + S SF NV+ + C+ +L+G
Sbjct: 69 WDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIG 128
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+ DL Q+ ++ Q +LA + + Y E SA T + ++ + +
Sbjct: 129 NKADL------------PDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLD 175
Query: 314 AALEPPEPPKKRKCV 328
++ + +CV
Sbjct: 176 LIMK-----RMEQCV 185
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 84.5 bits (208), Expect = 3e-20
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTA 119
+ T+K +++G+ VGK+ LL+ +T + F E T+ D T+ + G L ++DTA
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 64
Query: 120 GQEDYDRLRPLSYPQTDVFLVCF 142
GQE + L P Y ++ +
Sbjct: 65 GQERFRTLTPSYYRGAQGVILVY 87
Score = 71.4 bits (174), Expect = 1e-15
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 13/126 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + L P Y ++ + V +F + T+ + ++
Sbjct: 60 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 119
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+ + + +G K A++ + ++E SA T G++ F+E +
Sbjct: 120 GNKI------------DKENREVDRNEGLKFARKHS-MLFIEASAKTCDGVQCAFEELVE 166
Query: 314 AALEPP 319
++ P
Sbjct: 167 KIIQTP 172
Score = 54.9 bits (131), Expect = 9e-10
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGL 55
+ T+K +++G+ VGK+ LL+ +T + F E T+ D T+ + G L +
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 60
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 80.7 bits (198), Expect = 6e-19
Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 123
K +V+G+ GK+CLL + KF + T+ + + +GG+ L ++DTAGQE
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITN 183
+ + Y L+ + + L W S + + G +
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITS-----RETYNALTNWLTDARMLASQNIVIILCGNKKD 121
Query: 184 INPGWVRDRSLFDTAGQE 201
++ QE
Sbjct: 122 LDADREVTFLEASRFAQE 139
Score = 69.9 bits (170), Expect = 4e-15
Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 13/127 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + + Y L+ + + S ++ + Q +L G
Sbjct: 58 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 117
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+ D + + ++F + + A+E + ++E SALT + ++ F +
Sbjct: 118 NKKD------------LDADREVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCAR 164
Query: 314 AALEPPE 320
L E
Sbjct: 165 KILNKIE 171
Score = 49.9 bits (118), Expect = 4e-08
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
K +V+G+ GK+CLL + KF + T+ + ++
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKII 47
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 78.8 bits (193), Expect = 3e-18
Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 7/131 (5%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVP--TVFDNYAVTVMIGGEPYTLGLFDTAGQE 122
K ++VGD VGKTCLL+ + F + D + + G L ++DTAGQE
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 67
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFIT 182
+ + Y L+ + W I + L LG
Sbjct: 68 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQA-----WLTEIHEYAQHDVALMLLGNKV 122
Query: 183 NINPGWVRDRS 193
+ V R
Sbjct: 123 DSAHERVVKRE 133
Score = 71.4 bits (174), Expect = 1e-15
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 13/119 (10%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVG 253
++DTAGQE + + Y L+ + V + +SF+N++ + +L+G
Sbjct: 60 MWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLG 119
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
++D ++ + E GEKLAKE + ++E SA T + F
Sbjct: 120 NKVD------------SAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIA 165
Score = 48.7 bits (115), Expect = 1e-07
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVP--TVFDNYAVTVMIGGEPYTLGL 55
K ++VGD VGKTCLL+ + F + D + + G L +
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQM 60
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 78.0 bits (191), Expect = 5e-18
Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 13/146 (8%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
P G G ++DTAGQE + + Y L+ + +
Sbjct: 30 MADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR 89
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
S++ ++ T +L+G + DL Q+ +++E+ ++ A+
Sbjct: 90 STYNHLSSWLTDARNLTNPNTVIILIGNKADLE------------AQRDVTYEEAKQFAE 137
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAI 312
E ++E SA T + +++ F EA
Sbjct: 138 ENGL-LFLEASAKTGENVEDAFLEAA 162
Score = 75.3 bits (184), Expect = 5e-17
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQE 122
K +++GD VGK+CLL +T KF ++ T+ + + G+ L ++DTAGQE
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 123 DYDRLRPLSYPQTDVFLVCF 142
+ + Y L+ +
Sbjct: 65 RFRAVTRSYYRGAAGALMVY 84
Score = 51.4 bits (122), Expect = 1e-08
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYT 52
K +++GD VGK+CLL +T KF ++ T+ + + G+
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIK 54
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 77.2 bits (189), Expect = 1e-17
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD-NYAVTVMIGGEPYTLGLFDTAGQED 123
K V++GD VGK+ LL +T N+F E T+ ++ + G+ ++DTAGQE
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 124 YDRLRPLSYPQTDVFLVCF 142
Y R+ Y L+ +
Sbjct: 66 YRRITSAYYRGAVGALLVY 84
Score = 69.1 bits (168), Expect = 1e-14
Identities = 29/158 (18%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
+R F + E + + ++ ++ + ++DTAGQE Y R+ Y
Sbjct: 22 SRFTRNEF---NLESKSTIGVEFATRSIQVDGKTIKAQ-IWDTAGQERYRRITSAYYRGA 77
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQK 274
L+ + + ++ENV+ H +LVG + DLR A+ +
Sbjct: 78 VGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAE 137
Query: 275 PISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
+ ++E SAL ++ F +
Sbjct: 138 KN-------------NLSFIETSALDSTNVEEAFKNIL 162
Score = 52.6 bits (125), Expect = 6e-09
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD-NYAVTVMIGGEPYTLGLNF 57
K V++GD VGK+ LL +T N+F E T+ ++ + G+ +
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 59
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 74.6 bits (182), Expect = 7e-17
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 123
K V +G+ +VGKT L+ + + F + Y T+ D + T+ + L L+DTAGQE
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
+ L P + +V + W + TE + + +G
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTK-----WIDDVRTERGSDVIIMLVG 112
Score = 71.1 bits (173), Expect = 1e-15
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 13/145 (8%)
Query: 168 EHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPS 227
T L+DTAGQE + L P + +V + + + +
Sbjct: 27 NTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVN 86
Query: 228 SFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKE 287
SF+ + T +LVG + DL + ++ +S E+GE+ AKE
Sbjct: 87 SFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD------------KRQVSIEEGERKAKE 134
Query: 288 LKAVKYVECSALTQKGLKNVFDEAI 312
L ++E SA +K +F
Sbjct: 135 LNV-MFIETSAKAGYNVKQLFRRVA 158
Score = 54.6 bits (130), Expect = 9e-10
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K V +G+ +VGKT L+ + + F + Y T+ ++
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDF 37
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 73.8 bits (180), Expect = 2e-16
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
M+ K VV+G G VGK+ L + + T F +Y PT+ D Y + + P L + DTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 121 QEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSP 171
E + +R L F++ + +++N + D E P
Sbjct: 61 TEQFASMRDLYIKNGQGFILVY-SLVNQQSFQDIKPMRDQIIRVKRYEKVP 110
Score = 63.0 bits (152), Expect = 1e-12
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
E P ++ DTAG E + +R L F++ +S+V+
Sbjct: 29 IEKYDPTIEDFYRKEIEVDSSPSVLEI-LDTAGTEQFASMRDLYIKNGQGFILVYSLVNQ 87
Query: 227 SSFENVKEKWVPEITHH-CQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLA 285
SF+++K I +K P +LVG ++DL ++ +S +G LA
Sbjct: 88 QSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL------------ESEREVSSSEGRALA 135
Query: 286 KELKAVKYVECSALTQKGLKNVFDEAI 312
+E ++E SA ++ + +F E +
Sbjct: 136 EEWGC-PFMETSAKSKTMVDELFAEIV 161
Score = 60.3 bits (145), Expect = 1e-11
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
M+ K VV+G G VGK+ L + + T F +Y PT+ D Y + + P
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPS 51
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 71.9 bits (175), Expect = 1e-15
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 122
K +++GDG VGK+ L+ Y TNKF ++ T+ + + + G T+ ++DTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRK 157
+ LR Y +D L+ F + N K
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWK 101
Score = 68.4 bits (166), Expect = 2e-14
Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 19/156 (12%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
G ++DTAGQE + LR Y +D L+ FSV
Sbjct: 32 DTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDS 91
Query: 227 SSFENVKEKWVPEITHHCQ-----KTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQG 281
SF+N W E ++ PF+++G +ID+ E + +S E+
Sbjct: 92 QSFQN-LSNWKKEFIYYADVKEPESFPFVILGNKIDISE-------------RQVSTEEA 137
Query: 282 EKLAKELKAVKYVECSALTQKGLKNVFDEAILAALE 317
+ ++ Y E SA + F+EA+ L
Sbjct: 138 QAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 173
Score = 53.4 bits (127), Expect = 3e-09
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
K +++GDG VGK+ L+ Y TNKF ++ T+ + +
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDL 48
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 71.2 bits (173), Expect = 2e-15
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTAGQED 123
K V++G+ AVGK+ L++ + +F T+ TV + ++DTAGQE
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKL 175
Y L P+ Y +V + K + + L
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNE---ESFARAKNWVKELQRQASPNIVIAL 116
Score = 59.7 bits (143), Expect = 2e-11
Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 13/146 (8%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
E T ++DTAGQE Y L P+ Y +V + + +
Sbjct: 32 HEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNE 91
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
SF K L G + ++ + F++ + A
Sbjct: 92 ESFARAKNWVKELQRQASPNIVIALSGNK------------ADLANKRAVDFQEAQSYAD 139
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAI 312
+ ++ ++E SA T + +F
Sbjct: 140 D-NSLLFMETSAKTSMNVNEIFMAIA 164
Score = 50.0 bits (118), Expect = 4e-08
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K V++G+ AVGK+ L++ + +F T+ +
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAF 43
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 70.7 bits (172), Expect = 2e-15
Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
+ + G + +++DTAGQE + L P+ Y ++ ++ + +
Sbjct: 29 NDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDE 88
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
SF+ VK + +VG +IDL K++ +S ++ E A+
Sbjct: 89 DSFQKVKNWVKELRKMLGNEICLCIVGNKIDL------------EKERHVSIQEAESYAE 136
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAILAALE 317
+ A K+ SA KG++ +F + +E
Sbjct: 137 SVGA-KHYHTSAKQNKGIEELFLDLCKRMIE 166
Score = 69.2 bits (168), Expect = 7e-15
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 123
K V++G+G VGKT L++ Y NKF +++ T+ ++ + IGG+ L ++DTAGQE
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQER 64
Query: 124 YDRLRPLSYPQTDVFLVCF 142
+ L P+ Y ++ ++ +
Sbjct: 65 FHALGPIYYRDSNGAILVY 83
Score = 50.3 bits (119), Expect = 3e-08
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K V++G+G VGKT L++ Y NKF +++ T+ ++
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASF 40
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 70.4 bits (171), Expect = 3e-15
Identities = 21/120 (17%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG-LFDTA 119
++ +K ++GD VGK+ ++ + + F PT+ ++ + ++DTA
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 61
Query: 120 GQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
G E + L P+ Y + ++ + + L W + P + + G
Sbjct: 62 GLERFRALAPMYYRGSAAAIIVYDITKE-----ETFSTLKNWVRELRQHGPPSIVVAIAG 116
Score = 60.4 bits (145), Expect = 1e-11
Identities = 24/146 (16%), Positives = 47/146 (32%), Gaps = 13/146 (8%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
+ P + T + ++DTAG E + L P+ Y + ++ + +
Sbjct: 30 DPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAIIVYDITKE 89
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
+F +K H + G + DL + + + A
Sbjct: 90 ETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL------------TDVREVMERDAKDYAD 137
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAI 312
+ A +VE SA + +F E
Sbjct: 138 SIHA-IFVETSAKNAININELFIEIS 162
Score = 56.2 bits (134), Expect = 3e-10
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
++ +K ++GD VGK+ ++ + + F PT+ ++
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASF 41
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 70.3 bits (171), Expect = 3e-15
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 123
K +++GD VGK+CLL+ +T +F + T+ + A V I G+ L ++DTAGQE
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 124 YDRLRPLSYPQTDVFLVCF 142
+ + Y L+ +
Sbjct: 65 FRSITRSYYRGAAGALLVY 83
Score = 68.4 bits (166), Expect = 1e-14
Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
+ F H + + + NI+ ++ ++DTAGQE + + Y
Sbjct: 21 LQFTDKRF---QPVHDLTIGVEFGARMVNIDGKQIK-LQIWDTAGQESFRSITRSYYRGA 76
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQK 274
L+ + + +F ++ H +L+G + DL ++
Sbjct: 77 AGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE------------SRR 124
Query: 275 PISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
+ E+GE A+E ++E SA T ++ F
Sbjct: 125 DVKREEGEAFAREHGL-IFMETSAKTACNVEEAFINTA 161
Score = 54.5 bits (130), Expect = 1e-09
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
K +++GD VGK+CLL+ +T +F + T+ + ++
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV 45
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 69.3 bits (168), Expect = 6e-15
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG-EPYTLGLFDTA 119
+ +IK V++G+ AVGK+ +++ + +N F PT+ + + ++DTA
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60
Query: 120 GQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
GQE + L P+ Y LV + + +S R +++
Sbjct: 61 GQERFASLAPMYYRNAQAALVVYD--VTKPQSFIKARHWVKELHEQASKDIIIA 112
Score = 61.2 bits (147), Expect = 5e-12
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 10/146 (6%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
E+ P ++DTAGQE + L P+ Y LV + V P
Sbjct: 29 AENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKP 88
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
SF + + LVG +ID+ ++ ++ ++ E+GEKLA+
Sbjct: 89 QSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE---------GGERKVAREEGEKLAE 139
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAI 312
E + E SA T + + +VF
Sbjct: 140 EKGL-LFFETSAKTGENVNDVFLGIG 164
Score = 54.7 bits (130), Expect = 1e-09
Identities = 18/90 (20%), Positives = 35/90 (38%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFART 60
+ +IK V++G+ AVGK+ +++ + +N F PT+ + + E +
Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPS 90
Q + L+ Y K S
Sbjct: 61 GQERFASLAPMYYRNAQAALVVYDVTKPQS 90
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 69.3 bits (168), Expect = 7e-15
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 16/173 (9%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA--VTVMIGGEPYTLGLFDTAGQ 121
+K +++GD VGKT L+ Y +K+ +Y T+ ++ + G + T+ ++DTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFI 181
E + L Y D ++ + F + + L
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTN--------------ASSFENIKSWRDEFLVHANVN 108
Query: 182 TNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 234
+ +V + D + + + + + S + NV
Sbjct: 109 SPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDT 161
Score = 65.1 bits (157), Expect = 3e-13
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
+R + + S ++ + L ++ V ++DTAGQE + L Y
Sbjct: 20 HRYVNDKY---SQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGA 76
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITH----HCQKTPFLLVGTQIDLREDAPTLEKLAK 270
D ++ + V + SSFEN+K + H + PF+++G +ID
Sbjct: 77 DCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE----------- 125
Query: 271 NKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALE 317
+K +S + ++LAK L + SA + F+E +AL+
Sbjct: 126 ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 172
Score = 53.1 bits (126), Expect = 3e-09
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFART 60
+K +++GD VGKT L+ Y +K+ +Y T+ ++ + + T
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDT 59
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 68.5 bits (166), Expect = 1e-14
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
M+ K VV+G G VGK+ L + + F +Y PT+ D+Y V + + L + DTAG
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAG 60
Query: 121 QEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
E + +R L F + +I +N + + + + + +G
Sbjct: 61 TEQFTAMRDLYMKNGQGFALV----YSITAQSTFNDLQDLREQILRVKDTEDVPMILVG 115
Score = 59.6 bits (143), Expect = 2e-11
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52
M+ K VV+G G VGK+ L + + F +Y PT+ D+Y V + +
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCM 52
Score = 52.7 bits (125), Expect = 5e-09
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCQKTPFLLVG 253
DTAG E + +R L F + +S+ + S+F ++++ + + P +LVG
Sbjct: 56 LDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVG 115
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
+ D ++ + EQG+ LA++ ++E SA ++ + +F + +
Sbjct: 116 NKCD------------LEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLV 162
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 68.1 bits (165), Expect = 2e-14
Identities = 39/115 (33%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 121 QEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKL 175
QE+Y +R + F +N +S + + + PM L
Sbjct: 61 QEEYSAMRDQYMRTGEGF--LCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVL 113
Score = 58.1 bits (139), Expect = 7e-11
Identities = 25/53 (47%), Positives = 29/53 (54%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53
M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLL 53
Score = 48.4 bits (114), Expect = 1e-07
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCQKTPFLLV 252
DTAGQE+Y +R + FL F++ + SFE+ ++ +I P +LV
Sbjct: 56 LDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED-IHQYREQIKRVKDSDDVPMVLV 114
Query: 253 GTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
G + D + + Q + LA+ + Y+E SA T++G+++ F +
Sbjct: 115 GNKCD-------------LAARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLV 160
Query: 313 LAALE 317
+
Sbjct: 161 REIRQ 165
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 67.0 bits (162), Expect = 5e-14
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 61 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
+ T K VVVGDG VGK+ L I + F +Y PT+ D+Y I + L + DTAG
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG 61
Query: 121 QEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWN 155
QE++ +R D FL+ +
Sbjct: 62 QEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDR 96
Score = 55.4 bits (132), Expect = 5e-10
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
+ T K VVVGDG VGK+ L I + F +Y PT+ D+Y I +
Sbjct: 2 LPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWA 52
Score = 39.3 bits (90), Expect = 2e-04
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 199 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCQKTPFLLVGTQID 257
GQE++ +R D FL+ +SV +SFE+V + + P +LV ++D
Sbjct: 61 GQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVD 120
Query: 258 LREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQK-GLKNVFDEAILAAL 316
L + ++ +QG+++A + Y+E SA + F + +
Sbjct: 121 L------------MHLRKVTRDQGKEMATKYNI-PYIETSAKDPPLNVDKTFHDLVRVIR 167
Query: 317 E 317
+
Sbjct: 168 Q 168
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 67.0 bits (162), Expect = 7e-14
Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 17/172 (9%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 122
+K +++GD VGKT L+ Y KF ++Y T+ ++ + + T+ ++DTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFIT 182
+ L Y D ++ F + W + SP + +
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-----WRDEFLIQASPRDPENFPFVVL 117
Query: 183 NINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 234
+ A Y + + S NV++
Sbjct: 118 GNKIDLENRQVATKRAQAWCYSKNNI-----------PYFETSAKEAINVEQ 158
Score = 57.8 bits (138), Expect = 1e-10
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+K +++GD VGKT L+ Y KF ++Y T+ ++
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADF 39
Score = 45.8 bits (107), Expect = 1e-06
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 31/181 (17%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
N+ + F + + + ++DTAGQE + L Y
Sbjct: 20 NQYVNKKF----SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGA 75
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITH----HCQKTPFLLVGTQIDLREDAPTLEKLAK 270
D ++ F V +P++F+ + + + PF+++G +IDL
Sbjct: 76 DCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE----------- 124
Query: 271 NKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAAL----------EPPE 320
+ ++ ++ + + Y E SA ++ F AL E PE
Sbjct: 125 --NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPE 182
Query: 321 P 321
P
Sbjct: 183 P 183
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 65.1 bits (157), Expect = 2e-13
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
++ K ++G +VGK+ L I + +F Y PT+ + + + + G+ Y L L DTAGQ
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLH 176
++Y + + + +S + + + G + + P+ L
Sbjct: 63 DEYSIFPQTYSIDINGY--ILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLV 115
Score = 58.2 bits (139), Expect = 6e-11
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52
++ K ++G +VGK+ L I + +F Y PT+ + + + + G+ Y
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYH 53
Score = 38.6 bits (88), Expect = 4e-04
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 199 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQ-KTPFLLVGTQID 257
GQ++Y + +++ +SV S SFE +K + + + P +LVG + D
Sbjct: 61 GQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKD 120
Query: 258 LREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAA 315
L + ++ IS+E+G+ LA+ A ++E SA + +VF IL A
Sbjct: 121 L------------HMERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 165
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 64.6 bits (156), Expect = 3e-13
Identities = 25/114 (21%), Positives = 40/114 (35%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+K + G VGK+ L++ + T +F EY PT+ Y I E ++ + DTAGQED
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED 62
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHT 177
+ LV V + + +
Sbjct: 63 TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKA 116
Score = 62.0 bits (149), Expect = 3e-12
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTMQT 63
+K + G VGK+ L++ + T +F EY PT+ Y I E ++ + +
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED 62
Query: 64 IKC 66
Sbjct: 63 TIQ 65
Score = 35.0 bits (79), Expect = 0.005
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 208 PLSYPQTDVFLVCFSVVSPSSFENVKEKW-VPEITHHCQKTPFLLVGTQIDLREDAPTLE 266
+ F++ + + SFE V + + + +LVG + DL
Sbjct: 67 EGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADL-------- 118
Query: 267 KLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKG-LKNVFDEAI 312
+ + +S E+GEKLA EL + ECSA T +G + +F E
Sbjct: 119 ----DHSRQVSTEEGEKLATELAC-AFYECSACTGEGNITEIFYELC 160
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 64.7 bits (156), Expect = 3e-13
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 60 TMQ-TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 118
+MQ + VVVG G VGK+ L I + + F ++Y PT+ D+Y +I L + DT
Sbjct: 1 SMQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDT 60
Query: 119 AGQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKL 175
AGQE++ +R + FL+ F S + K + PM L
Sbjct: 61 AGQEEFGAMREQYMRTGEGFLLVFSVTDR--GSFEEIYKFQRQILRVKDRDEFPMIL 115
Score = 53.1 bits (126), Expect = 3e-09
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+ VVVG G VGK+ L I + + F ++Y PT+ D+Y
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY 42
Score = 44.6 bits (104), Expect = 3e-06
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 199 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCQKTPFLLVGTQI 256
GQE++ +R + FL+ FSV SFE + K+ +I + P +L+G
Sbjct: 62 GQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIY-KFQRQILRVKDRDEFPMILIGN-- 118
Query: 257 DLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
K + Q+ ++ E+G++LA++LK Y+E SA + + F E +
Sbjct: 119 ----------KADLDHQRQVTQEEGQQLARQLKV-TYMEASAKIRMNVDQAFHELV 163
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 64.7 bits (156), Expect = 3e-13
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 5/117 (4%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
+T K VVVG G VGK+ L I + + F S+Y PT+ D+Y + G P L + DTAGQ
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQ 64
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTL 178
E++ +R FL+ F + F I L
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGK-----LFTQILRVKDRDDFPVVL 116
Score = 57.0 bits (136), Expect = 1e-10
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
+T K VVVG G VGK+ L I + + F S+Y PT+ D+Y + G P
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPA 54
Score = 47.4 bits (111), Expect = 4e-07
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 14/124 (11%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCQKTPFLLVG 253
DTAGQE++ +R FL+ F++ SF V + + + P +LVG
Sbjct: 59 LDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVG 118
Query: 254 TQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAIL 313
+ DL A V Y E SA + + F++ +
Sbjct: 119 NKADLESQRQVPRSEASAFGAS-------------HHVAYFEASAKLRLNVDEAFEQLVR 165
Query: 314 AALE 317
A +
Sbjct: 166 AVRK 169
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 63.8 bits (154), Expect = 6e-13
Identities = 24/108 (22%), Positives = 39/108 (36%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+ V G G VGK+ L++ + F Y+PTV D Y + TL + DT G
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 62
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSP 171
+ ++ LS + F++ + E P
Sbjct: 63 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIP 110
Score = 55.0 bits (131), Expect = 7e-10
Identities = 20/89 (22%), Positives = 34/89 (38%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTMQT 63
+ V G G VGK+ L++ + F Y+PTV D Y + TL +
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 62
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEY 92
+ + G +L+ T++ E
Sbjct: 63 FPAMQRLSISKGHAFILVYSITSRQSLEE 91
Score = 46.9 bits (110), Expect = 4e-07
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 199 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW--VPEITHHCQKTPFLLVGTQI 256
G + ++ LS + F++ +S+ S S E +K + + EI + P +LVG
Sbjct: 59 GSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGN-- 116
Query: 257 DLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
K ++ + + + E LA+ K ++E SA +K +F E +
Sbjct: 117 ----------KCDESPSREVQSSEAEALARTWKC-AFMETSAKLNHNVKELFQELL 161
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 63.0 bits (152), Expect = 1e-12
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 60 TMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 119
++ K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTA
Sbjct: 1 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTA 60
Query: 120 GQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPP 172
GQEDY +R + + FL F + + + I
Sbjct: 61 GQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATAD-----FREQILRVKEDE 108
Score = 53.0 bits (126), Expect = 4e-09
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K ++VG G VGK+ L + + ++F +Y PT D+Y
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSY 41
Score = 50.7 bits (120), Expect = 2e-08
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 188 WVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCQ 245
+ DTAGQEDY +R + + FL FS+ + + +I +
Sbjct: 50 EEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSI-TEMESFAATADFREQILRVKEDE 108
Query: 246 KTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLK 305
PFLLVG K ++ +S E+ + A + V YVE SA T+ +
Sbjct: 109 NVPFLLVGN------------KSDLEDKRQVSVEEAKNRADQWN-VNYVETSAKTRANVD 155
Query: 306 NVFDEAI 312
VF + +
Sbjct: 156 KVFFDLM 162
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 61.3 bits (147), Expect = 4e-12
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 122
IK VVVG+GAVGK+ ++ Y F +Y T+ ++ + + E L L+DTAGQE
Sbjct: 3 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 62
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFW 163
++D + Y ++ F + +
Sbjct: 63 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAE 103
Score = 50.9 bits (120), Expect = 2e-08
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
IK VVVG+GAVGK+ ++ Y F +Y T+ ++
Sbjct: 3 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDF 39
Score = 42.0 bits (97), Expect = 2e-05
Identities = 37/163 (22%), Positives = 53/163 (32%), Gaps = 18/163 (11%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
R G F T+ L+DTAGQE++D + Y
Sbjct: 20 QRYCKGIF----TKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGA 75
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQK 274
++ FS SFE W ++ P LV +IDL +
Sbjct: 76 QACVLVFSTTDRESFEA-ISSWREKVVAEVGDIPTALVQNKIDLLD------------DS 122
Query: 275 PISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALE 317
I E+ E LAK LK ++ S + VF L+
Sbjct: 123 CIKNEEAEGLAKRLKL-RFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 61.2 bits (147), Expect = 6e-12
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 8/135 (5%)
Query: 59 RTMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 118
R++ ++ V+GD GK+ L+ + T + T + Y +++ G+ + + + +
Sbjct: 1 RSIPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREE 59
Query: 119 AGQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTL 178
AG D V F + S +L G + E + L +
Sbjct: 60 AGAPDA-------KFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALV 112
Query: 179 GFITNINPGWVRDRS 193
G I+ R
Sbjct: 113 GTQDRISASSPRVVG 127
Score = 56.5 bits (135), Expect = 3e-10
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFART 60
+ ++ V+GD GK+ L+ + T + T + Y +++ G+ + + +
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAG 61
Query: 61 MQTIKCVVVGDGAVGKTC 78
K D +
Sbjct: 62 APDAKFSGWADAVIFVFS 79
Score = 43.8 bits (102), Expect = 5e-06
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 211 YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAK 270
D + FS+ +SF+ V +++ + L + ++
Sbjct: 68 SGWADAVIFVFSLEDENSFQAVSR-LHGQLSSLRGEGRGGLALALVGTQDRIS------A 120
Query: 271 NKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALE 317
+ + + + L ++K Y E A + VF E +
Sbjct: 121 SSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVT 167
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 60.4 bits (145), Expect = 8e-12
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 122
K +V+GD VGKTCL + +FP T+ ++ V I GE + L+DTAGQE
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 123 DYDRL-RPLSYPQTDVFLVCFGNMMN 147
+ + Y + +
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNM 88
Score = 52.3 bits (124), Expect = 7e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
K +V+GD VGKTCL + +FP T+ ++ +
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAV 44
Score = 41.9 bits (97), Expect = 2e-05
Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 17/154 (11%)
Query: 155 NRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQT 214
R G F + + +I+ ++ + + + Y
Sbjct: 20 YRFCAGRF---PDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNV 76
Query: 215 DVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLVGTQIDLREDAPTLEKLAKNKQ 273
+ + + + +SF ++ H P +LVG + DL
Sbjct: 77 HAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDL------------RSA 124
Query: 274 KPISFEQGEKLAKELKAVKYVECSALTQKGLKNV 307
+ + +K A E SA +V
Sbjct: 125 IQVPTDLAQKFADTHSM-PLFETSAKNPNDNDHV 157
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 58.1 bits (139), Expect = 6e-11
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQED 123
K V+VGDG GKT + + T +F +YV T+ V P ++DTAGQE
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 64
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
+ LR Y Q ++ F + N + + P+
Sbjct: 65 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNW----HRDLVRVCENIPI 110
Score = 52.3 bits (124), Expect = 7e-09
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K V+VGDG GKT + + T +F +YV T+
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 40
Score = 42.7 bits (99), Expect = 1e-05
Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
+ + + +++DTAGQE + LR Y Q ++ F V S
Sbjct: 29 EKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSR 88
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
+++NV ++ C+ P +L G ++D+++ + + +++K +
Sbjct: 89 VTYKNVPNWH-RDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNL---------- 137
Query: 287 ELKAVKYVECSALTQKGLKNVFDEAILAALEPP 319
+Y + SA + + F + P
Sbjct: 138 -----QYYDISAKSNYNFEKPFLWLARKLIGDP 165
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 57.0 bits (136), Expect = 1e-10
Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 9/138 (6%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
++ ++VG A GKT +L + + F+ + + + ++D GQ+
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE----TVEYKNISFTVWDVGGQDK 56
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITN 183
L + T + + + + + E + +
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSN-----DRERVNEAREELMRMLAEDELRDAVLLVFANKQ 111
Query: 184 INPGWVRDRSLFDTAGQE 201
P + + D G
Sbjct: 112 DLPNAMNAAEITDKLGLH 129
Score = 52.3 bits (124), Expect = 5e-09
Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 9/116 (7%)
Query: 195 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGT 254
+D GQ+ L + T + +E+ + + + LLV
Sbjct: 49 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFA 108
Query: 255 QIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDE 310
+A + I+ + G + + A + GL D
Sbjct: 109 NKQDLPNAMNAAE--------ITDKLGLHSLRH-RNWYIQATCATSGDGLYEGLDW 155
Score = 47.7 bits (112), Expect = 2e-07
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
++ ++VG A GKT +L + + F+
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE 37
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 51.9 bits (123), Expect = 1e-08
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 5/94 (5%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+K +++G G GK+ + VPT + + D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIE---YPFDLQSVIFRMVDVGGQRS 57
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRK 157
R + + + V+ + +
Sbjct: 58 ERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE 91
Score = 45.3 bits (106), Expect = 2e-06
Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+K +++G G GK+ + VPT
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIE 37
Score = 41.1 bits (95), Expect = 7e-05
Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 27/164 (16%)
Query: 177 TLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---- 232
T G I + D GQ R + + ++
Sbjct: 32 TTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE 91
Query: 233 ------KEKWVPEITHHC-QKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLA 285
K + IT+ Q + +L + DL E+ L + ++ + A
Sbjct: 92 NRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAA 151
Query: 286 KELKAVKYV-------------ECSALTQKGLKNVFD---EAIL 313
+E +V A + ++ VF + IL
Sbjct: 152 REFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTIL 195
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 51.6 bits (122), Expect = 1e-08
Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 3/113 (2%)
Query: 200 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-QKTPFLLVGTQIDL 258
R+ P + + KE+ +T P L++G +ID
Sbjct: 67 HIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDR 126
Query: 259 REDAPTLEKLAKNKQKPISFEQGEKLAKELKA--VKYVECSALTQKGLKNVFD 309
E + +G KEL A ++ CS L ++G F
Sbjct: 127 PEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFR 179
Score = 42.4 bits (98), Expect = 2e-05
Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 5/112 (4%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
+T K V +G GKT LL ++ + +T+ FD G
Sbjct: 12 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTT----FDLGGH 67
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
R+ P + + + + R ++ +L + + P +
Sbjct: 68 IQARRVWKNYLPAINGIVFLV-DCADHERLLESKEELDSLMTDETIANVPIL 118
Score = 39.7 bits (91), Expect = 1e-04
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
+T K V +G GKT LL ++ + +T+
Sbjct: 12 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIA 55
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 50.5 bits (119), Expect = 3e-08
Identities = 24/170 (14%), Positives = 39/170 (22%), Gaps = 13/170 (7%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 124
K + +G GKT LL ++ + PT + FD G
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-ATLQPTWHPTS---EELAIGNIKFTTFDLGGHIQA 57
Query: 125 DRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITNI 184
RL +P+ + + D R + I+ P I
Sbjct: 58 RRLWKDYFPEVNGIVFLV--DAADPERFDEARVELDALFNIAELKDVPF------VILGN 109
Query: 185 NPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 234
S + + + F S E
Sbjct: 110 KIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFM-CSVVMRNGYLE 158
Score = 46.6 bits (109), Expect = 5e-07
Identities = 18/134 (13%), Positives = 39/134 (29%), Gaps = 2/134 (1%)
Query: 176 HTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 235
T + + FD G RL +P+ + + P F+ + +
Sbjct: 30 PTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVE 89
Query: 236 WVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVE 295
K ++ +A + +L + G + + + V+
Sbjct: 90 LDALFNIAELKDVPFVILGNKIDAPNAVSEAELRS--ALGLLNTTGSQRIEGQRPVEVFM 147
Query: 296 CSALTQKGLKNVFD 309
CS + + G F
Sbjct: 148 CSVVMRNGYLEAFQ 161
Score = 43.5 bits (101), Expect = 6e-06
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
K + +G GKT LL ++ + PT
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL-ATLQPTWHPTS 36
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 49.3 bits (116), Expect = 7e-08
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+ ++ +VG GKT + + +F + +PTV N
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM 39
Score = 49.3 bits (116), Expect = 7e-08
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 100
+ ++ +VG GKT + + +F + +PTV N
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNM 39
Score = 36.2 bits (82), Expect = 0.002
Identities = 15/149 (10%), Positives = 36/149 (24%), Gaps = 10/149 (6%)
Query: 164 FISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV 223
S + + M + I G V + + + + +
Sbjct: 22 IASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAA 81
Query: 224 VSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEK 283
+ E Q P L++G + DL +K + +
Sbjct: 82 DQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG---------ALDEKELIEKMNLS 132
Query: 284 LAKELKAVKYVECSALTQKGLKNVFDEAI 312
++ + + S + + I
Sbjct: 133 AIQDRE-ICCYSISCKEKDNIDITLQWLI 160
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 49.6 bits (117), Expect = 7e-08
Identities = 13/104 (12%), Positives = 26/104 (25%), Gaps = 11/104 (10%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+K +++G G GK+ ++ + + FD GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKM--------FDVGGQRS 54
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRR---SVDWNRKLGGWFWF 164
+ + + C + NR F
Sbjct: 55 ERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLF 98
Score = 44.2 bits (103), Expect = 5e-06
Identities = 5/37 (13%), Positives = 14/37 (37%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+K +++G G GK+ ++ + +
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTF 39
Score = 39.6 bits (91), Expect = 2e-04
Identities = 20/157 (12%), Positives = 39/157 (24%), Gaps = 24/157 (15%)
Query: 177 TLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVK--- 233
G + +FD GQ + + + C ++
Sbjct: 29 GTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM 88
Query: 234 -------EKWVPEITHHC-QKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLA 285
+ + + T +L + DL E+ L + E+ A
Sbjct: 89 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA 148
Query: 286 KEL-------------KAVKYVECSALTQKGLKNVFD 309
+ K + A K ++ VFD
Sbjct: 149 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFD 185
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 49.3 bits (116), Expect = 8e-08
Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 124
K +++G VGK+ L + + Y ++++ GE +L ++D Q+
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGG 61
Query: 125 DRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFIS 166
L D +++ + ++ +
Sbjct: 62 RWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQT 103
Score = 45.9 bits (107), Expect = 1e-06
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTMQTI 64
K +++G VGK+ L + + Y ++++ GE +L +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGG 61
Query: 65 KCV 67
+ +
Sbjct: 62 RWL 64
Score = 32.0 bits (71), Expect = 0.054
Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 271 NKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAI 312
+ + +S ++G A K++E SA ++ +F+ +
Sbjct: 118 VRSREVSVDEGRACAVVFDC-KFIETSAALHHNVQALFEGVV 158
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 49.2 bits (116), Expect = 9e-08
Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 9/111 (8%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
+ ++ +++G A GKT +L + + F+ + + ++D GQ
Sbjct: 11 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVE----TVTYKNVKFNVWDVGGQ 66
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPP 172
+ L Y T + D + I +
Sbjct: 67 DKIRPLWRHYYTGTQGLIFVVDCADR-----DRIDEARQELHRIINDREMR 112
Score = 43.4 bits (101), Expect = 8e-06
Identities = 17/143 (11%), Positives = 38/143 (26%), Gaps = 9/143 (6%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
+ T+GF +++D GQ+ L Y T +
Sbjct: 33 KLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADR 92
Query: 227 SSFENVKEKWVPEITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAK 286
+ +++ I + +L+ DA ++ + G +
Sbjct: 93 DRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEK--------LGLTRIR 144
Query: 287 ELKAVKYVECSALTQKGLKNVFD 309
+ + A + GL
Sbjct: 145 D-RNWYVQPSCATSGDGLYEGLT 166
Score = 43.0 bits (100), Expect = 1e-05
Identities = 7/39 (17%), Positives = 17/39 (43%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
+ ++ +++G A GKT +L + + F+
Sbjct: 11 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVE 49
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 48.6 bits (114), Expect = 1e-07
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 65 KCVVVGDGAVGKTCLLISYTTNKF--PSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 122
+ V++G+ VGK+ L + S+ D Y T+M+ GE T+ L D +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 123 DYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
+ Q + ++ + + TE P +
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPII 115
Score = 44.7 bits (104), Expect = 2e-06
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNKF--PSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTMQ 62
+ V++G+ VGK+ L + S+ D Y T+M+ GE T+ L +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 63 TIKC 66
Sbjct: 65 GENE 68
Score = 34.3 bits (77), Expect = 0.009
Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 14/150 (9%)
Query: 164 FISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV 223
+ T ++ L + + + L D +L+ +S+
Sbjct: 28 DSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAYLIVYSI 87
Query: 224 VSPSSFENVKEKWVPEITHHC-QKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGE 282
+SFE E + + P +LVG + D + + +S +G
Sbjct: 88 TDRASFEKASELRIQLRRARQTEDIPIILVGNKSD------------LVRCREVSVSEGR 135
Query: 283 KLAKELKAVKYVECSALTQKGLKNVFDEAI 312
A K++E SA Q +K +F+ +
Sbjct: 136 ACAVVFDC-KFIETSAAVQHNVKELFEGIV 164
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 48.8 bits (115), Expect = 1e-07
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 11/145 (7%)
Query: 167 TEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 226
T GF +++D GQ + TD+ +
Sbjct: 37 ASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADR 96
Query: 227 SSFENVKEKWVPEITHH-CQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLA 285
FE ++ + P L+ + DL I+
Sbjct: 97 KRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT---------AAPASEIAEGLNLHTI 147
Query: 286 KELKAVKYVECSALTQKGLKNVFDE 310
++ + + CSALT +G+++ +
Sbjct: 148 RD-RVWQIQSCSALTGEGVQDGMNW 171
Score = 41.9 bits (97), Expect = 2e-05
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 5/110 (4%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
Q ++ +++G GKT LL + F+ +V G G
Sbjct: 15 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIK--SVQSQGFKLN---VWDIGG 69
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSP 171
+ R SY + L+ + + +R + ++L P
Sbjct: 70 QRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVP 119
Score = 40.7 bits (94), Expect = 6e-05
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
Q ++ +++G GKT LL + F+
Sbjct: 15 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIK 53
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 47.3 bits (111), Expect = 4e-07
Identities = 17/138 (12%), Positives = 37/138 (26%), Gaps = 9/138 (6%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
++ +++G GKT +L + + F+ ++ + L ++D GQ
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSY----KNLKLNVWDLGGQTS 73
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITN 183
Y T + + R S + E +
Sbjct: 74 IRPYWRCYYADTAAVIFVVDSTDKDRMSTASK-----ELHLMLQEEELQDAALLVFANKQ 128
Query: 184 INPGWVRDRSLFDTAGQE 201
PG + +
Sbjct: 129 DQPGALSASEVSKELNLV 146
Score = 40.7 bits (94), Expect = 7e-05
Identities = 6/40 (15%), Positives = 17/40 (42%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT 43
++ +++G GKT +L + + F+ ++
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLS 57
Score = 39.6 bits (91), Expect = 2e-04
Identities = 17/118 (14%), Positives = 32/118 (27%), Gaps = 11/118 (9%)
Query: 194 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLV 252
++D GQ Y T + ++ + Q L+
Sbjct: 65 VWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVF 124
Query: 253 GTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSALTQKGLKNVFDE 310
+ D E +S E K+ ++ V SA+ +G+ D
Sbjct: 125 ANKQDQPGALSASE---------VSKELNLVELKD-RSWSIVASSAIKGEGITEGLDW 172
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 45.8 bits (107), Expect = 9e-07
Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 5/110 (4%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
++ +++G GKT +L + PT+ N + + L ++D GQ+
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDV-DTISPTLGFNI---KTLEHRGFKLNIWDVGGQKS 58
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPM 173
+ TD + + + +R D R+L + +
Sbjct: 59 LRSYWRNYFESTDGLIWVV-DSADRQRMQDCQRELQSLLVEERLAGATLL 107
Score = 42.3 bits (98), Expect = 2e-05
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
++ +++G GKT +L + PT+ N
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDV-DTISPTLGFNI 38
Score = 42.0 bits (97), Expect = 2e-05
Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 11/136 (8%)
Query: 176 HTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 235
TLGF +++D GQ+ + TD + ++ + +
Sbjct: 32 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRE 91
Query: 236 WVPEITH-HCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYV 294
+ L+ + DL + I +
Sbjct: 92 LQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHH----------WRIQ 141
Query: 295 ECSALTQKGLKNVFDE 310
CSA+T + L D
Sbjct: 142 GCSAVTGEDLLPGIDW 157
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 46.2 bits (108), Expect = 1e-06
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 1/113 (0%)
Query: 67 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDR 126
+ VG GKT L + T ++ + ++ D+ A+ + +L L D G E
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQY-RDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRF 62
Query: 127 LRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLG 179
+ + +V + +R V + S L
Sbjct: 63 QLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIAC 115
Score = 43.5 bits (101), Expect = 1e-05
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLNFARTMQTIKC 66
+ VG GKT L + T ++ + ++ D+ A+ + +L L ++++
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQY-RDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRF 62
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 45.1 bits (105), Expect = 2e-06
Identities = 13/101 (12%), Positives = 30/101 (29%), Gaps = 4/101 (3%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
++ +++G GKT +L + V T+ + + ++D G
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEV----VTTIPTIGFNVETVTYKNLKFQVWDLGGLTS 61
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWF 164
Y TD + + R + + +
Sbjct: 62 IRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEE 102
Score = 42.8 bits (99), Expect = 1e-05
Identities = 6/37 (16%), Positives = 15/37 (40%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY 40
++ +++G GKT +L + + F+
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVE 42
Score = 32.4 bits (72), Expect = 0.039
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 179 GFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP 238
GF ++D G Y TD + K + V
Sbjct: 38 GFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVA 97
Query: 239 EITHHCQKTPFL-LVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECS 297
+ + L + + D+ + + E ++ G K+ K + + S
Sbjct: 98 MLEEEELRKAILVVFANKQDMEQAMTSSE---------MANSLGLPALKDRK-WQIFKTS 147
Query: 298 ALTQKGLKNVFDE 310
A GL +
Sbjct: 148 ATKGTGLDEAMEW 160
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 44.9 bits (105), Expect = 3e-06
Identities = 12/101 (11%), Positives = 28/101 (27%), Gaps = 6/101 (5%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+K +++G G GK+ L + PT + + + D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIH---EYDFEIKNVPFKMVDVGGQRS 56
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWF 164
+ + L + + ++ +
Sbjct: 57 ERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESL 97
Score = 40.3 bits (93), Expect = 1e-04
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
+K +++G G GK+ L + PT
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTK 32
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 43.8 bits (102), Expect = 6e-06
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 6/103 (5%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
Q K ++VG GKT +L ++ N+ + + + ++D GQ
Sbjct: 14 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVIN----NTRFLMWDIGGQ 69
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWF 164
E T+ V R + R+
Sbjct: 70 ESLRSSWN--TYYTNTEFVIVVVDSTDRERISVTREELYKMLA 110
Score = 43.5 bits (101), Expect = 9e-06
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 11/136 (8%)
Query: 176 HTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 235
T+G ++D GQE Y T+ +V +E+
Sbjct: 45 PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREE 104
Query: 236 WVPEITHHCQKTPFLL-VGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYV 294
+ H + LL + D++E E IS K+ +
Sbjct: 105 LYKMLAHEDLRKAGLLIFANKQDVKECMTVAE---------ISQFLKLTSIKDHQ-WHIQ 154
Query: 295 ECSALTQKGLKNVFDE 310
C ALT +GL +
Sbjct: 155 ACCALTGEGLCQGLEW 170
Score = 41.1 bits (95), Expect = 4e-05
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 45
Q K ++VG GKT +L ++ N+ + + +
Sbjct: 14 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVIN 57
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 42.8 bits (100), Expect = 2e-05
Identities = 13/92 (14%), Positives = 26/92 (28%), Gaps = 7/92 (7%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
T + +++G G GK+ ++ V T + +FD GQ
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRIL----HVVLTS---GIFETKFQVDKVNFHMFDVGGQ 57
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVD 153
D R + + + +
Sbjct: 58 RDERRKWIQCFNDVTAIIFVVASSSYNMVIRE 89
Score = 39.4 bits (91), Expect = 3e-04
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
T + +++G G GK+ ++ V T
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRIL----HVVLTS 35
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.3 bits (64), Expect = 0.36
Identities = 16/121 (13%), Positives = 31/121 (25%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 123
+K V+ G GK+ LL + + + I + L + DTAG +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 124 YDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITN 183
+ + + + + + P KL
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 184 I 184
Sbjct: 122 A 122
Score = 28.9 bits (63), Expect = 0.51
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 4 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
+K V+ G GK+ LL ++ ++ T D + I G P
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPL 51
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 29.6 bits (65), Expect = 0.41
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 7 VVVGDGAVGKTCLLISYTTNKF 28
++ G GKT LL TT+
Sbjct: 7 IIAGPQNSGKTSLLTLLTTDSV 28
Score = 29.6 bits (65), Expect = 0.41
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 67 VVVGDGAVGKTCLLISYTTNKF 88
++ G GKT LL TT+
Sbjct: 7 IIAGPQNSGKTSLLTLLTTDSV 28
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 29.1 bits (64), Expect = 0.46
Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 17/144 (11%)
Query: 180 FITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE 239
F+ PG + G + + + + P + + E
Sbjct: 51 FVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSE 110
Query: 240 ITHHCQKTPFLLVGTQIDLREDAPTLEKLAKNKQKPISFEQGEKLAKELKAVKYVECSAL 299
+ P ++V ++D+ E A LE + SA+
Sbjct: 111 YNLRLTERPQIIVANKMDMPEAAENLEAFKEKLTDDY---------------PVFPISAV 155
Query: 300 TQKGLKNVFDEAILAALEP-PEPP 322
T++GL+ + + LE PE P
Sbjct: 156 TREGLRELLF-EVANQLENTPEFP 178
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 28.4 bits (62), Expect = 0.74
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 64 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
++ V+VG VGK+ LL + ++ T D + ++I G + + DTAG
Sbjct: 1 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFR--IVDTAG 57
Score = 28.0 bits (61), Expect = 1.1
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 4 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52
++ V+VG VGK+ LL + ++ T D + ++I G +
Sbjct: 1 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFR 51
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 28.1 bits (61), Expect = 1.00
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 287 ELKAVKYVECSALTQKGLKNVFD--EAILAALEPPEPPK 323
+ + + SALT GL + + A++ + PPE PK
Sbjct: 139 AREGLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPK 177
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 27.7 bits (60), Expect = 1.3
Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 14/167 (8%)
Query: 64 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 121
IK +VG VGK+ L I S T D V I G Y DTAG
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV--FVDTAGL 66
Query: 122 EDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFI 181
R+ P + + +++ D +T+ G +
Sbjct: 67 RRKSRVEPRTVEKY-----SNYRVVDSIEKAD-----VVVIVLDATQGITRQDQRMAGLM 116
Query: 182 TNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSS 228
V + +D + + ++ + +S + +S
Sbjct: 117 ERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTS 163
Score = 25.8 bits (55), Expect = 5.6
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 4 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51
IK +VG VGK+ L I S T D V I G Y
Sbjct: 9 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKY 58
>d1ipaa1 c.116.1.1 (A:106-263) RrmA (RrmH), C-terminal domain
{Thermus thermophilus [TaxId: 274]}
Length = 158
Score = 27.6 bits (60), Expect = 1.4
Identities = 11/102 (10%), Positives = 28/102 (27%)
Query: 143 GNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQED 202
GN+ + RS D +SP + ++ G + ++ + + D Q +
Sbjct: 23 GNLGAVLRSADAAGAEAVLVAGGVDLYSPQVIRNSTGVVFSLRTLAASESEVLDWIKQHN 82
Query: 203 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC 244
+ + + + + E
Sbjct: 83 LPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAA 124
>d1w85b2 c.48.1.2 (B:193-324) Pyruvate dehydrogenase E1-beta, PdhB,
C-terminal domain {Bacillus stearothermophilus [TaxId:
1422]}
Length = 132
Score = 27.0 bits (59), Expect = 1.5
Identities = 6/56 (10%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 135 TDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSP-PMKLHTLGFITNINPGWV 189
D+ ++ +G M++ + G + + P+ + T+ +
Sbjct: 10 KDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAI 65
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 27.4 bits (59), Expect = 1.8
Identities = 12/118 (10%), Positives = 28/118 (23%), Gaps = 1/118 (0%)
Query: 62 QTIKCVVVGDGAVGKTCLLISYTTNKFPS-EYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 120
I+ G GK+ L + T K + + + L
Sbjct: 15 TGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGY 74
Query: 121 QEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTL 178
E + ++ +L ++ + +D L + +
Sbjct: 75 AEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLV 132
Score = 25.5 bits (54), Expect = 9.0
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFP 29
I+ G GK+ L + T K
Sbjct: 15 TGIEVAFAGRSNAGKSSALNTLTNQKSL 42
>d1umdb2 c.48.1.2 (B:188-324) Branched-chain alpha-keto acid
dehydrogenase {Thermus thermophilus [TaxId: 274]}
Length = 137
Score = 27.0 bits (59), Expect = 1.9
Identities = 6/37 (16%), Positives = 12/37 (32%)
Query: 135 TDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSP 171
D+ L+C+G +M G + +
Sbjct: 16 KDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRTL 52
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 27.8 bits (61), Expect = 2.0
Identities = 26/199 (13%), Positives = 56/199 (28%), Gaps = 18/199 (9%)
Query: 64 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG----LFDTA 119
+ V G+ GK+ I+ E VT+ + +D
Sbjct: 57 LNVAVTGETGSGKS-SFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLP 115
Query: 120 GQEDY-----DRLRPLSYPQTDVFLVCF--GNMMNIRRSVDWNRKLGGWFWFISTEHSPP 172
G L + + + D F++ N + F+F+ T+
Sbjct: 116 GIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVRTKVDSD 175
Query: 173 MKLHTLGFITNINPGWVRDRSLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV 232
+ G + V + + R + +FL+ V F +
Sbjct: 176 ITNEADGEPQTFDKEKVLQDIRLNCV-----NTFRENGIAEPPIFLLSNKNVCHYDFPVL 230
Query: 233 KEKWVPEITHHCQKTPFLL 251
+K + ++ F++
Sbjct: 231 MDKLI-SDLPIYKRHNFMV 248
>d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007
{Vibrio cholerae [TaxId: 666]}
Length = 128
Score = 26.0 bits (56), Expect = 4.2
Identities = 8/89 (8%), Positives = 21/89 (23%), Gaps = 2/89 (2%)
Query: 100 YAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLG 159
+++ +G T+ L + G+ D + D L +
Sbjct: 5 QFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEF--FQTYAAQL 62
Query: 160 GWFWFISTEHSPPMKLHTLGFITNINPGW 188
I+ + + +
Sbjct: 63 DRVTSIAITLPGLVNSEQGIVLQMPHYNV 91
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.5 bits (57), Expect = 4.5
Identities = 17/144 (11%), Positives = 40/144 (27%), Gaps = 21/144 (14%)
Query: 187 GWVRDRSLFDTAGQEDYDRLRPLSYPQTD------VFLVCFSVVSPSSFENVKEKWVPEI 240
D L DT GQ + + V + + + ++ +
Sbjct: 92 EKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALL 151
Query: 241 THHCQKTPFLLVGTQIDL---------REDAPTLEKLAKNKQKPISFEQGEKLAKEL--- 288
+ ++DL R+ ++ L + S +
Sbjct: 152 IDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMT 211
Query: 289 ---KAVKYVECSALTQKGLKNVFD 309
V+ + SA T++G +++
Sbjct: 212 EVLPPVRVLYLSAKTREGFEDLET 235
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375
{environmental samples}
Length = 109
Score = 25.6 bits (56), Expect = 5.0
Identities = 4/12 (33%), Positives = 7/12 (58%)
Query: 20 LISYTTNKFPSE 31
S+TT F ++
Sbjct: 6 FTSFTTADFIND 17
Score = 25.6 bits (56), Expect = 5.0
Identities = 4/12 (33%), Positives = 7/12 (58%)
Query: 80 LISYTTNKFPSE 91
S+TT F ++
Sbjct: 6 FTSFTTADFIND 17
>d1woqa1 c.55.1.10 (A:11-139) Inorganic
polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter
sp. KM [TaxId: 184230]}
Length = 129
Score = 25.6 bits (55), Expect = 6.0
Identities = 9/83 (10%), Positives = 22/83 (26%)
Query: 106 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFI 165
IGG G+ D + + PQ + + + + +
Sbjct: 9 IGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPV 68
Query: 166 STEHSPPMKLHTLGFITNINPGW 188
++ + N++ W
Sbjct: 69 GVTFPGIIQHGVVHSAANVDKSW 91
>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 233
Score = 25.8 bits (56), Expect = 6.5
Identities = 14/60 (23%), Positives = 20/60 (33%)
Query: 146 MNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTLGFITNINPGWVRDRSLFDTAGQEDYDR 205
NI+ + G F + P K LG N + FDT +D+D
Sbjct: 74 FNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDWDP 133
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 25.5 bits (54), Expect = 7.0
Identities = 12/112 (10%), Positives = 23/112 (20%), Gaps = 2/112 (1%)
Query: 67 VVVGDGAVGKTCLLISYTTNKFP--SEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 124
+VG VGK+ LL + K S T + G +
Sbjct: 9 AIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMD 68
Query: 125 DRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLH 176
+ + + + + + L
Sbjct: 69 ALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILL 120
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 25.5 bits (54), Expect = 7.8
Identities = 12/119 (10%), Positives = 22/119 (18%), Gaps = 7/119 (5%)
Query: 67 VVVGDGAVGKTCLL-------ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 119
++VG VGK+ L + ++ P +
Sbjct: 4 LIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQ 63
Query: 120 GQEDYDRLRPLSYPQTDVFLVCFGNMMNIRRSVDWNRKLGGWFWFISTEHSPPMKLHTL 178
+ LV F + + K L
Sbjct: 64 DIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAENL 122
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.428
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,274,138
Number of extensions: 60655
Number of successful extensions: 452
Number of sequences better than 10.0: 1
Number of HSP's gapped: 416
Number of HSP's successfully gapped: 204
Length of query: 330
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 244
Effective length of database: 1,226,816
Effective search space: 299343104
Effective search space used: 299343104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.8 bits)