BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780122|ref|YP_003064535.1| hypothetical protein
CLIBASIA_00005 [Candidatus Liberibacter asiaticus str. psy62]
(123 letters)
Database: nr
13,841,106 sequences; 4,750,259,772 total letters
Searching..................................................done
Results from round 1
>gi|254780122|ref|YP_003064535.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039799|gb|ACT56595.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120736|gb|ADV02558.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
gi|317120797|gb|ADV02618.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
Length = 123
Score = 253 bits (645), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
Query: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
Query: 121 NQI 123
NQI
Sbjct: 121 NQI 123
>gi|317120693|gb|ADV02516.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
gi|317120837|gb|ADV02658.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
Length = 123
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/123 (99%), Positives = 123/123 (100%)
Query: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
Query: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
TILDKLDA+DDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61 TILDKLDAVDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
Query: 121 NQI 123
NQI
Sbjct: 121 NQI 123
>gi|315121961|ref|YP_004062450.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122929|ref|YP_004063418.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495363|gb|ADR51962.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496331|gb|ADR52930.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 128
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
Query: 1 MGALKNHFHDEINENFYFHSHPNA------DPDISIEMQISENQRYLDEEISQCNAVVDV 54
MG LK H+ +EI N+ F+ N +P+ SI+ ++ E R LD+ C +V
Sbjct: 1 MGKLKQHYMEEIEANYEFNCLNNPRFNLDPEPEPSIKEEVEELIRSLDQRFLWCCDLVRD 60
Query: 55 FKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEH 114
+RSD TILDKLDAM++++ Y+S+L+ TA L+ LLKE E + E +EE EHPDQEH
Sbjct: 61 LQRSDYTILDKLDAMEEMRMYLSVLRPTANRLEDLLKES-WEEPEKEPEEEPREHPDQEH 119
Query: 115 REDYYANQI 123
+ YYA+QI
Sbjct: 120 ADAYYADQI 128
>gi|254781220|ref|YP_003065633.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040897|gb|ACT57693.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120684|gb|ADV02507.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
gi|317120726|gb|ADV02548.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
gi|317120787|gb|ADV02608.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
gi|317120828|gb|ADV02649.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
Length = 130
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
Query: 1 MGALKNHFHDEINENFYFHSHPNA----DPDISIEMQISENQRYLDEEISQCNAVVDVFK 56
MG LK ++ +EI N+ F S N +P+ + E+++ E L+ + ++
Sbjct: 1 MGQLKQYYLEEIEANYEFLSAVNPRMGIEPESNYEVEVIEK---LERALKTSKKLIHFRD 57
Query: 57 RSDST-ILDKLDAMDDLKTYISLLQATAKNLKSLL---KEYW----EESLDGEDDEEIYE 108
R+ T IL+ D ++++ I L +A + L+ + E W E D E E E
Sbjct: 58 RTIRTHILE--DLIEEVNRIIVLAKAHKRRLELKIFEDNEVWRLLDEAREDCEGCENCSE 115
Query: 109 HPDQEHREDYYANQI 123
HPDQEH+EDYYA+QI
Sbjct: 116 HPDQEHKEDYYASQI 130
>gi|58262484|ref|XP_568652.1| heat shock protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134118960|ref|XP_771983.1| hypothetical protein CNBN1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254587|gb|EAL17336.1| hypothetical protein CNBN1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230826|gb|AAW47135.1| heat shock protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 798
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 29 SIEMQISENQRYLD-EEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLK 87
S + I+ +QR L EEI + + F D+ + K++AM++L+ +I L++ + +
Sbjct: 610 SESITITNDQRRLSPEEIERMVQEAEEFADEDAAVKRKIEAMNNLQNFIFSLKSQIGDAE 669
Query: 88 SLLKEYWEESLD------GEDDEEIYEHPDQEHREDY 118
L + E+ D E E + EHP Q EDY
Sbjct: 670 GLGGKLSEDDKDTILSAIKEKTEWLDEHP-QSDAEDY 705
>gi|300868806|ref|ZP_07113413.1| two-component signalling protein HstK (Ser/thr & His kinase domains)
[Oscillatoria sp. PCC 6506]
gi|300333157|emb|CBN58605.1| two-component signalling protein HstK (Ser/thr & His kinase domains)
[Oscillatoria sp. PCC 6506]
Length = 1893
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 7 HFHDEINE-NFYFHSHPNADPDIS-------IEMQISENQRYLD------EEISQCNAVV 52
+FHD + N Y PNA P+I+ +E IS+ R LD E I Q +
Sbjct: 1646 YFHDLLGVLNLYQQQLPNATPEINNLAENVDLEFLISDFPRLLDSMQVGAERIRQIVLSL 1705
Query: 53 DVFKRSDSTILDKLDAMDDLKTYISLLQ 80
F R D ++ ++D + L + + LLQ
Sbjct: 1706 RNFSRLDEAVMKEVDIHEGLDSTLLLLQ 1733
>gi|7635897|emb|CAA89834.2| luminal binding protein [Pseudotsuga menziesii]
Length = 675
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 35 SENQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYW 94
++ R EEI + + F D + DK+DA ++L+TY+ +++T K+
Sbjct: 547 NDKGRLSQEEIERMVKEAEEFAEEDKKVKDKIDARNNLETYVYNMKSTINE-----KDKL 601
Query: 95 EESLDGEDDEEI 106
+ +D ED E+I
Sbjct: 602 ADKIDSEDKEKI 613
>gi|321265704|ref|XP_003197568.1| kar2 karyogamy protein [Cryptococcus gattii WM276]
gi|317464048|gb|ADV25781.1| Kar2 karyogamy protein, putative [Cryptococcus gattii WM276]
Length = 744
Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 29 SIEMQISENQRYLD-EEISQCNAVVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLK 87
S + I+ +QR L EEI + + F D+ I K++AM+ L+ +I L++ + +
Sbjct: 545 SESITITNDQRRLSPEEIERMVQEAEEFADEDAAIKRKIEAMNGLQNFIFSLKSQINDAE 604
Query: 88 SLLKEYWEESLD------GEDDEEIYEHPDQEHREDY 118
L + E+ D E E + EHP Q EDY
Sbjct: 605 GLGGKLSEDDKDTILSAIKEKTEWLDEHP-QADAEDY 640
Searching..................................................done
Results from round 2
CONVERGED!
>gi|254780122|ref|YP_003064535.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039799|gb|ACT56595.1| hypothetical protein CLIBASIA_00005 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120736|gb|ADV02558.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
gi|317120797|gb|ADV02618.1| hypothetical protein SC2_gp185 [Liberibacter phage SC2]
Length = 123
Score = 160 bits (404), Expect = 7e-38, Method: Composition-based stats.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
Query: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
Query: 121 NQI 123
NQI
Sbjct: 121 NQI 123
>gi|317120693|gb|ADV02516.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
gi|317120837|gb|ADV02658.1| hypothetical protein SC1_gp185 [Liberibacter phage SC1]
Length = 123
Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats.
Identities = 122/123 (99%), Positives = 123/123 (100%)
Query: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS
Sbjct: 1 MGALKNHFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDS 60
Query: 61 TILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
TILDKLDA+DDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA
Sbjct: 61 TILDKLDAVDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYA 120
Query: 121 NQI 123
NQI
Sbjct: 121 NQI 123
>gi|315121961|ref|YP_004062450.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|315122929|ref|YP_004063418.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495363|gb|ADR51962.1| hypothetical protein CKC_01055 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496331|gb|ADR52930.1| hypothetical protein CKC_05925 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 128
Score = 122 bits (305), Expect = 2e-26, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 1 MGALKNHFHDEINENFYFHSHPNA------DPDISIEMQISENQRYLDEEISQCNAVVDV 54
MG LK H+ +EI N+ F+ N +P+ SI+ ++ E R LD+ C +V
Sbjct: 1 MGKLKQHYMEEIEANYEFNCLNNPRFNLDPEPEPSIKEEVEELIRSLDQRFLWCCDLVRD 60
Query: 55 FKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEH 114
+RSD TILDKLDAM++++ Y+S+L+ TA L+ LLKE WEE ++E DQEH
Sbjct: 61 LQRSDYTILDKLDAMEEMRMYLSVLRPTANRLEDLLKESWEEPEKEPEEEPREHP-DQEH 119
Query: 115 REDYYANQI 123
+ YYA+QI
Sbjct: 120 ADAYYADQI 128
>gi|254781220|ref|YP_003065633.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040897|gb|ACT57693.1| hypothetical protein CLIBASIA_05635 [Candidatus Liberibacter
asiaticus str. psy62]
gi|317120684|gb|ADV02507.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
gi|317120726|gb|ADV02548.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
gi|317120787|gb|ADV02608.1| hypothetical protein SC2_gp135 [Liberibacter phage SC2]
gi|317120828|gb|ADV02649.1| hypothetical protein SC1_gp135 [Liberibacter phage SC1]
Length = 130
Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 1 MGALKNHFHDEINENFYFHSHPNA----DPDISIEMQISENQRYLDEEISQCNAVVDVFK 56
MG LK ++ +EI N+ F S N +P+ + E+++ E L+ + ++
Sbjct: 1 MGQLKQYYLEEIEANYEFLSAVNPRMGIEPESNYEVEVIEK---LERALKTSKKLIHFRD 57
Query: 57 RSDSTILDKLDAMDDLKTYISLLQATAKNLKSLL---KEYW----EESLDGEDDEEIYEH 109
R+ T + + D ++++ I L +A + L+ + E W E D E E EH
Sbjct: 58 RTIRTHILE-DLIEEVNRIIVLAKAHKRRLELKIFEDNEVWRLLDEAREDCEGCENCSEH 116
Query: 110 PDQEHREDYYANQI 123
PDQEH+EDYYA+QI
Sbjct: 117 PDQEHKEDYYASQI 130
>gi|149923595|ref|ZP_01911994.1| hypothetical protein PPSIR1_00390 [Plesiocystis pacifica SIR-1]
gi|149815564|gb|EDM75098.1| hypothetical protein PPSIR1_00390 [Plesiocystis pacifica SIR-1]
Length = 450
Score = 37.8 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 51 VVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGED 102
++ V +RSD +L + + I L A A+ ++ ++E WE + ED
Sbjct: 72 LITVRERSD--LLRPVGDRTRYRRIIDALMALARRSEAFIRETWEWRPECED 121
>gi|9630051|ref|NP_046269.1| hypothetical protein OpmnVgp113 [Orgyia pseudotsugata MNPV]
gi|1911359|gb|AAC59112.1| unknown [Orgyia pseudotsugata MNPV]
Length = 361
Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 37 NQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDD------------LKTYISLLQATAK 84
L+E + +V F DS ++ LDAM D +K +L T
Sbjct: 187 LISRLEEALHGECFIVWTFDELDSYVVQSLDAMRDKTITQFAEYTGFIKNTNRVLAFTMN 246
Query: 85 NLKSLLKEYWEESLDGEDDEEIYEHPDQEHR 115
N + LL +YW + E + YEH D R
Sbjct: 247 NAEMLLHDYWGDRERIEANFTHYEHVDDLRR 277
>gi|196008771|ref|XP_002114251.1| hypothetical protein TRIADDRAFT_57859 [Trichoplax adhaerens]
gi|190583270|gb|EDV23341.1| hypothetical protein TRIADDRAFT_57859 [Trichoplax adhaerens]
Length = 1173
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 7 HFHDEINENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILDKL 66
+ + + E F S+ + E + E+ + L + Q + + +DST + +
Sbjct: 587 FYGESVEELFEQVSNGDEIEWPEEEDAVPEDAKDLITRLLQQDPATRLGTTTDSTEVKEH 646
Query: 67 DAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHREDYYAN 121
+ D+ + SLL+ + + L E D D H D+E E+Y ++
Sbjct: 647 ELFQDID-WASLLRQKVEFVPELDNEEDTSYFDPRTDRYCRTHSDEESDENYDSD 700
>gi|219130227|ref|XP_002185271.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403186|gb|EEC43140.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 373
Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 51 VVDVFKRSDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYW 94
V+ VF + D+ +++LD +D + Y+ + NL+ L++E W
Sbjct: 248 VLYVFNKIDAITIEELDILDQMPNYVPISSQHEWNLEELMEEIW 291
>gi|320170807|gb|EFW47706.1| hypoxia up-regulated protein [Capsaspora owczarzaki ATCC 30864]
Length = 1035
Score = 33.9 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 58 SDSTILDKLDAMDDLKTYISLLQATAKNLKSLLKEYWEESLDGEDDEEIYEHPDQEHRED 117
S +TI +LDA+ + + L+A +L+SL+ + S E+DEE+ H QE R++
Sbjct: 750 SLTTITARLDAVRESERKRRQLEAAKNDLESLV---YSISARLEEDEELRAHTSQEQRDE 806
Query: 118 YYA 120
A
Sbjct: 807 LLA 809
>gi|309775269|ref|ZP_07670278.1| sensor histidine kinase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916932|gb|EFP62663.1| sensor histidine kinase [Erysipelotrichaceae bacterium 3_1_53]
Length = 570
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 8 FHDEINEN---FYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILD 64
F +I E+ + + + S + +++ R + V K ++++
Sbjct: 302 FQTDIEESLGMYEPLKSNLQNIEASFQDAVAQEVRSQNMRTELITNVSHDLKTPLTSMIS 361
Query: 65 KLDAM-------DDLKTYISLLQATAKNLKSLLKEYWE 95
+D + ++ YI++L+A + LK L+++ +E
Sbjct: 362 YIDLLKNEELPQEERSRYIAILEAGSNRLKHLIEDLFE 399
>gi|168704774|ref|ZP_02737051.1| hypothetical protein GobsU_34877 [Gemmata obscuriglobus UQM 2246]
Length = 737
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 10/108 (9%)
Query: 14 ENFYFHSHPNADPDISIEMQISENQRYLDEEISQCNAVVDVFKRSDSTILDKLDAMDDLK 73
E+F H H + +P + ++ R L E C V KR + D ++
Sbjct: 207 ESFARHIHSSLNP-TEVAYHVANEGRKLIECDRLCVGVRHDRKRVTVEAVSGADVVEKAS 265
Query: 74 TYISLLQATAKNLKSLLKEY--WEESLDGEDDEEIYEHPDQEHREDYY 119
T + L+ L++ W E+L + +++ PD H D Y
Sbjct: 266 T-------HVRRLRLLMQAVLQWGETLTFKGEKDPGLPPDVSHALDDY 306
Database: nr
Posted date: May 5, 2011 12:50 PM
Number of letters in database: 999,999,510
Number of sequences in database: 2,987,262
Database: /data/usr2/db/fasta/nr.01
Posted date: May 5, 2011 12:58 PM
Number of letters in database: 999,999,740
Number of sequences in database: 2,896,872
Database: /data/usr2/db/fasta/nr.02
Posted date: May 5, 2011 1:04 PM
Number of letters in database: 999,999,277
Number of sequences in database: 2,907,728
Database: /data/usr2/db/fasta/nr.03
Posted date: May 5, 2011 1:11 PM
Number of letters in database: 999,999,899
Number of sequences in database: 2,932,281
Database: /data/usr2/db/fasta/nr.04
Posted date: May 5, 2011 1:15 PM
Number of letters in database: 750,261,346
Number of sequences in database: 2,116,963
Lambda K H
0.311 0.129 0.335
Lambda K H
0.267 0.0394 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,995,655,753
Number of Sequences: 13841106
Number of extensions: 62390304
Number of successful extensions: 242846
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 242602
Number of HSP's gapped (non-prelim): 429
length of query: 123
length of database: 4,750,259,772
effective HSP length: 89
effective length of query: 34
effective length of database: 3,518,401,338
effective search space: 119625645492
effective search space used: 119625645492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 75 (33.6 bits)