RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780123|ref|YP_003064536.1| hypothetical protein CLIBASIA_00010 [Candidatus Liberibacter asiaticus str. psy62] (107 letters) >1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, heat shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A Length = 265 Score = 30.6 bits (69), Expect = 0.097 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 7 EEAVKAKDIPQLLTFLSLITQGLQEALITQDVKAVEAVDPDLKKRVTVLAISYMKRCGDK 66 ++ + + + + SL + LQ+ +DV+ ++ + A +M+RC D Sbjct: 171 KKRLGPGGLDPVEVYESL-PEELQKCFDVKDVQMLQDAISKMDPTD---AKYHMQRCIDS 226 Query: 67 G 67 G Sbjct: 227 G 227 >2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron} Length = 325 Score = 25.8 bits (56), Expect = 2.6 Identities = 4/32 (12%), Positives = 10/32 (31%) Query: 14 DIPQLLTFLSLITQGLQEALITQDVKAVEAVD 45 +P L L+ + +A + + Sbjct: 223 ALPGKGNGLELVLDSVLDATFIYPTNGDKVLQ 254 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.319 0.135 0.368 Gapped Lambda K H 0.267 0.0552 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 860,572 Number of extensions: 34638 Number of successful extensions: 78 Number of sequences better than 10.0: 1 Number of HSP's gapped: 77 Number of HSP's successfully gapped: 6 Length of query: 107 Length of database: 5,693,230 Length adjustment: 71 Effective length of query: 36 Effective length of database: 3,971,906 Effective search space: 142988616 Effective search space used: 142988616 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 50 (23.4 bits)