HHsearch alignment for GI: 254780124 and conserved domain: PHA01622

>PHA01622 CRISPR-associated Cas4-like protein.
Probab=98.34  E-value=1.1e-05  Score=56.86  Aligned_cols=131  Identities=18%  Similarity=0.137  Sum_probs=81.2

Q ss_pred             EEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
Q ss_conf             688775532000440589999999985997999981136887--674466879999999999843835676513899999
Q gi|254780124|r   96 LSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGV--PVKAENNTQLMLYACGALHQYGDIFGRPEALTLTII  173 (388)
Q Consensus        96 ~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~--~v~a~~n~QL~lYALgA~~~~~~~~~~~~~v~~~I~  173 (388)
T Consensus        68 nCetEv~Is~ei~GI~IsGRiD~iC~Nd----lIEiKTt~~~~~~p~~~Hl~Qv~vY~~l~----~~q~~~~~~iYi-VY  138 (204)
T PHA01622         68 NCQTEVEIKDEIEGIKISGRIDIVCNND----LLEIKTISYNYFQVKEYHLYQVALYYHIL----KKQNYQINNVYI-VY  138 (204)
T ss_pred             CCEEECCCCCCEEEEEEEEEEEEECCCC----EEEEEEEECCCCCCHHHHHHHHHHHHHHH----CCCCCCCCCEEE-EE
T ss_conf             7457323355401599972550102574----49999630203770588999999999997----347863342799-99


Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             83048877543025898899999999999999998577653047766788866667257644562
Q gi|254780124|r  174 QPRVRTGSPINEWVISADDLLEKAKEFKERGTLALSLKSKRAVSLEHYGVNDDSCRFCRAKVRCP  238 (388)
Q Consensus       174 qpr~~~~~~vs~~~~s~eeL~~~~~~v~~~a~~~~~~~a~~~~~~~~~~~~g~~CrfC~~k~~Cr  238 (388)
T Consensus       139 i~R~--~~eVkef~idesvLet~~~~~~~~i~~yk~~~~e~dyk~v-p~~d~~fCk~CeF~~kCi  200 (204)
T PHA01622        139 LNRN--TREVKQFKIDEKVLETYYQKVIEWIKKFKEYLKETDYKKV-PGVNNYICKSCEFKQKCI  200 (204)
T ss_pred             EECC--CCHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC-CCCCCEEECCCEEEEEEE
T ss_conf             9547--3255721204999999999999999999998520452017-787605751434421377