HHsearch alignment of GI: 254780124 and MMDB domain: 1w36_B_886-964_1014-1180
>1w36_B (B:886-964,B:1014-1180) RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli}
Probab=98.91 E-value=5.3e-10 Score=84.79 Aligned_cols=182 Identities=13% Similarity=0.046 Sum_probs=91.4
Q ss_pred CCCCCCCHHHHHCCCHHHHHHC---------CCCCCC-C-HH-----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 5618423677871832388621---------389998-9-88-----999899999999997245765343220104564
Q gi|254780124|r 5 AFLSASSSHRWLKCPIAPTLES---------KIPQTT-S-IY-----ASEGTFAHNLLAHCLEQGVDAETVSHQKLTFEN 68 (388)
Q Consensus 5 A~LSpSs~~rwl~CP~s~~Le~---------~~pd~~-S-~a-----A~~GT~~H~llE~~l~~~l~~~~~~~~~~~~~~ 68 (388)
+..|.|+..|-.+-+..-.+.. ..|+.+ | .+ |.-||+.|.++|..-- ..+...........
T Consensus 17 ~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~h~~~e~~~~---~~~~l~E~e~~~~l 93 (246)
T 1w36_B 17 RVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDF---ARNKQVEMEFYLPI 93 (246)
T ss_dssp EEESSCSSSCSSCTTHHHHCTTSCTTCCCCCCSCCCSSCCGGGSCCSHHHHHHHHHHTTSCCS---GGGEEEEEEEEEEE
T ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC---HHCCEECCCCCCCC
T ss_conf 013714543223555444455545554344321027767800057648669999999984889---20325412555234
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCCCCCC------
Q ss_conf 53775788999999999998503787368877553200044058999999998599799998113688767446------
Q gi|254780124|r 69 DTRIVDTEMASSVSMVLAYVRTFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVPVKAE------ 142 (388)
Q Consensus 69 ~~~~~~~e~~~~v~~~~~~~r~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~v~a~------ 142 (388)
......+.+...+.. ...... .+..+.+......+.|+||||...+|++.|||||||+-......
T Consensus 94 ~~~~~~~~l~~~l~~-------e~~~~~--~e~~l~~~~~~~~i~G~IDlv~~~dd~~~IIDYKT~~~~~~~~~~~~~al 164 (246)
T 1w36_B 94 SEPLIASQLDTLIRQ-------FDPLSA--GCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAM 164 (246)
T ss_dssp CSCCCHHHHHHHHHH-------HCSSTT--SCCCCCSCCCEEEEEEEEEEEEBSSSCBCCEEEECCCCCSSGGGSBHHHH
T ss_pred CCCCCHHHHHHHHHH-------CCCCCC--CCCCCCCCCCEEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHH
T ss_conf 631008789999973-------262001--25432344540269999999999999999997178998998300289999
Q ss_pred --------CCHHHHHHHHHHHHHCCCCCCC----CCEEEEEEEEEECCCC----CCCCCCCCCHHHHHHHHH
Q ss_conf --------6879999999999843835676----5138999998304887----754302589889999999
Q gi|254780124|r 143 --------NNTQLMLYACGALHQYGDIFGR----PEALTLTIIQPRVRTG----SPINEWVISADDLLEKAK 198 (388)
Q Consensus 143 --------~n~QL~lYALgA~~~~~~~~~~----~~~v~~~I~qpr~~~~----~~vs~~~~s~eeL~~~~~ 198 (388)
..+||.+|++++.+.++..... .....+.-+.+|..+. ..+-.+..+.+.+..+.+
T Consensus 165 ~~~~~~~~Y~~QL~lYa~AL~~~~~~~V~~~ly~l~~G~vi~iflrg~~~~~~~~G~~~~~~~~e~i~~l~~ 236 (246)
T 1w36_B 165 AAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDE 236 (246)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHSSSCCHHHHCCCCEEEESSSCCTTCTTBSCCBCCCCSSHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHH
T ss_conf 999987863999999999999997072679866650781799995798999999976841799999999999