HHsearch alignment of GI: 254780124 and MMDB domain: 3h4r_A_

>3h4r_A (A:) Exodeoxyribonuclease 8; exonuclease, recombination, hydrolase; 2.80A {Escherichia coli k-12}
Probab=99.90  E-value=2.8e-23  Score=171.99  Aligned_cols=223  Identities=13%  Similarity=0.040  Sum_probs=140.4

Q ss_pred             CCCCCCCCCHHHHHCCCHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------C-------
Q ss_conf             775618423677871832388621--389998988999899999999997245765343220104-------5-------
Q gi|254780124|r    3 HHAFLSASSSHRWLKCPIAPTLES--KIPQTTSIYASEGTFAHNLLAHCLEQGVDAETVSHQKLT-------F-------   66 (388)
Q Consensus         3 ~HA~LSpSs~~rwl~CP~s~~Le~--~~pd~~S~aA~~GT~~H~llE~~l~~~l~~~~~~~~~~~-------~-------   66 (388)
                      .+..||+|++.+|+.||.+++|+.  +++.+.++++.+||++|.+++.+.+..............       .       
T Consensus         9 ~~~~~S~S~l~~~~~Cp~~~~~~~~~~~~~~~~~~~~~G~~~H~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (265)
T 3h4r_A            9 AGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLELEEFSNRFIVAPEFNRRTNAGKEEEKAFLMEC   88 (265)
T ss_dssp             --CCBCHHHHHHHHHCHHHHHHHTTSCCCCCCCSCCTHHHHHHHHHSSHHHHTCC-------------------------
T ss_pred             CCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             89983988999998599999999737899999779987299999874722321233246630234566667999998655


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHH-------CCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCC
Q ss_conf             -64537757889999999999985-------0378736887755320004405899999999859979999811368876
Q gi|254780124|r   67 -ENDTRIVDTEMASSVSMVLAYVR-------TFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVP  138 (388)
Q Consensus        67 -~~~~~~~~~e~~~~v~~~~~~~r-------~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~  138 (388)
                       ........+.+...+..++....       ..........|+.+.....+..+.|++|+|+  +|.+.|||||||+.+.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~G~iD~i~--~~~~~IiDyKTg~~~~  166 (265)
T 3h4r_A           89 ASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKII--PEFHWIMDVKTTADIQ  166 (265)
T ss_dssp             ---------CCCTTHHHHHHHHHTTSHHHHHHHSSSCBSSCCEEEECTTTCCEEEECCSEEE--GGGTEEEEEEEESCHH
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEE--CCCCEEEEEEECCCHH
T ss_conf             53165421299999999999999829546766542023147899997676648888899997--7997488983026777


Q ss_pred             CC------CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74------46687999999999984383567651389999983048--87754302589889999999999999999857
Q gi|254780124|r  139 VK------AENNTQLMLYACGALHQYGDIFGRPEALTLTIIQPRVR--TGSPINEWVISADDLLEKAKEFKERGTLALSL  210 (388)
Q Consensus       139 v~------a~~n~QL~lYALgA~~~~~~~~~~~~~v~~~I~qpr~~--~~~~vs~~~~s~eeL~~~~~~v~~~a~~~~~~  210 (388)
                      ..      ....+||.+|++++.+.++...     ....++.....  ....+.....+.+.+....+.+...+..+...
T Consensus       167 ~~~~~~~~~~~~~Ql~lY~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (265)
T 3h4r_A          167 RFKTAYYDYRYHVQDAFYSDGYEAQFGVQP-----TFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDC  241 (265)
T ss_dssp             HHHHHHHHHTTTHHHHHHHHHHHHHHSSCC-----EEEEEEEESSCBTTBCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHCCCCC-----CEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             653201233779999999999998429998-----639999983356776227999689999999999999999999999


Q ss_pred             HHHHHCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf             76530477667-888666672576445
Q gi|254780124|r  211 KSKRAVSLEHY-GVNDDSCRFCRAKVR  236 (388)
Q Consensus       211 ~a~~~~~~~~~-~~~g~~CrfC~~k~~  236 (388)
                      ..    ++.++ ++++++|+||+||+.
T Consensus       242 ~~----~~~~~~~~~~~~C~~C~~k~~  264 (265)
T 3h4r_A          242 LN----TDEWPAIKTLSLPRWAKEYAN  264 (265)
T ss_dssp             HH----TCCCCCCCCCCCCTTCTTCC-
T ss_pred             HH----CCCCCCCCCCCCCCCCCCCCC
T ss_conf             96----697999864678845110005