HHsearch alignment of GI: 254780124 and MMDB domain: 3h4r_A_
>3h4r_A (A:) Exodeoxyribonuclease 8; exonuclease, recombination, hydrolase; 2.80A {Escherichia coli k-12}
Probab=99.90 E-value=2.8e-23 Score=171.99 Aligned_cols=223 Identities=13% Similarity=0.040 Sum_probs=140.4
Q ss_pred CCCCCCCCCHHHHHCCCHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------C-------
Q ss_conf 775618423677871832388621--389998988999899999999997245765343220104-------5-------
Q gi|254780124|r 3 HHAFLSASSSHRWLKCPIAPTLES--KIPQTTSIYASEGTFAHNLLAHCLEQGVDAETVSHQKLT-------F------- 66 (388)
Q Consensus 3 ~HA~LSpSs~~rwl~CP~s~~Le~--~~pd~~S~aA~~GT~~H~llE~~l~~~l~~~~~~~~~~~-------~------- 66 (388)
.+..||+|++.+|+.||.+++|+. +++.+.++++.+||++|.+++.+.+.............. .
T Consensus 9 ~~~~~S~S~l~~~~~Cp~~~~~~~~~~~~~~~~~~~~~G~~~H~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (265)
T 3h4r_A 9 AGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLELEEFSNRFIVAPEFNRRTNAGKEEEKAFLMEC 88 (265)
T ss_dssp --CCBCHHHHHHHHHCHHHHHHHTTSCCCCCCCSCCTHHHHHHHHHSSHHHHTCC-------------------------
T ss_pred CCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89983988999998599999999737899999779987299999874722321233246630234566667999998655
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHH-------CCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCC
Q ss_conf -64537757889999999999985-------0378736887755320004405899999999859979999811368876
Q gi|254780124|r 67 -ENDTRIVDTEMASSVSMVLAYVR-------TFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVP 138 (388)
Q Consensus 67 -~~~~~~~~~e~~~~v~~~~~~~r-------~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~ 138 (388)
........+.+...+..++.... ..........|+.+.....+..+.|++|+|+ +|.+.|||||||+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~G~iD~i~--~~~~~IiDyKTg~~~~ 166 (265)
T 3h4r_A 89 ASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKII--PEFHWIMDVKTTADIQ 166 (265)
T ss_dssp ---------CCCTTHHHHHHHHHTTSHHHHHHHSSSCBSSCCEEEECTTTCCEEEECCSEEE--GGGTEEEEEEEESCHH
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEE--CCCCEEEEEEECCCHH
T ss_conf 53165421299999999999999829546766542023147899997676648888899997--7997488983026777
Q ss_pred CC------CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74------46687999999999984383567651389999983048--87754302589889999999999999999857
Q gi|254780124|r 139 VK------AENNTQLMLYACGALHQYGDIFGRPEALTLTIIQPRVR--TGSPINEWVISADDLLEKAKEFKERGTLALSL 210 (388)
Q Consensus 139 v~------a~~n~QL~lYALgA~~~~~~~~~~~~~v~~~I~qpr~~--~~~~vs~~~~s~eeL~~~~~~v~~~a~~~~~~ 210 (388)
.. ....+||.+|++++.+.++... ....++..... ....+.....+.+.+....+.+...+..+...
T Consensus 167 ~~~~~~~~~~~~~Ql~lY~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (265)
T 3h4r_A 167 RFKTAYYDYRYHVQDAFYSDGYEAQFGVQP-----TFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDC 241 (265)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHSSCC-----EEEEEEEESSCBTTBCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHCCCCC-----CEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 653201233779999999999998429998-----639999983356776227999689999999999999999999999
Q ss_pred HHHHHCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 76530477667-888666672576445
Q gi|254780124|r 211 KSKRAVSLEHY-GVNDDSCRFCRAKVR 236 (388)
Q Consensus 211 ~a~~~~~~~~~-~~~g~~CrfC~~k~~ 236 (388)
.. ++.++ ++++++|+||+||+.
T Consensus 242 ~~----~~~~~~~~~~~~C~~C~~k~~ 264 (265)
T 3h4r_A 242 LN----TDEWPAIKTLSLPRWAKEYAN 264 (265)
T ss_dssp HH----TCCCCCCCCCCCCTTCTTCC-
T ss_pred HH----CCCCCCCCCCCCCCCCCCCCC
T ss_conf 96----697999864678845110005