HHsearch alignment of GI: 254780124 and MMDB domain: 3l0a_A_
>3l0a_A (A:) Putative exonuclease; RER070207002219, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: PE4; 2.19A {Eubacterium rectale}
Probab=99.93 E-value=3.6e-24 Score=177.86 Aligned_cols=225 Identities=14% Similarity=0.078 Sum_probs=146.2
Q ss_pred CCCCCCCHHHHHC------CCHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 5618423677871------83238862--138999898899989999999999724576534322010456453775788
Q gi|254780124|r 5 AFLSASSSHRWLK------CPIAPTLE--SKIPQTTSIYASEGTFAHNLLAHCLEQGVDAETVSHQKLTFENDTRIVDTE 76 (388)
Q Consensus 5 A~LSpSs~~rwl~------CP~s~~Le--~~~pd~~S~aA~~GT~~H~llE~~l~~~l~~~~~~~~~~~~~~~~~~~~~e 76 (388)
..||||++++|+. ||.++.+. .++|...+.++..||++|.++|........... .......+.....+.
T Consensus 17 ~~~S~S~l~~~~~~~~~~~cp~~~~~~~~~~~~~~~~~a~~~Gt~iH~~le~~~~~~~~~~~---~~~~~~~~~~~~~~~ 93 (266)
T 3l0a_A 17 EYXSVSGYKDFAGTYGKXPCEFYGXEKLNGRWEDEKSTALLVGSYVDSYFEGSLDQFKKDNP---EIFTQKGELKANFKQ 93 (266)
T ss_dssp HCEEHHHHHHHHCBTTBCCCHHHHHHHHHTSCCCCCCHHHHHHHHHHHHHHTCHHHHHHHCG---GGBCTTSSBCHHHHH
T ss_pred CCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHHHHHH
T ss_conf 65478689998449510007799999861767888987899978999998727676544173---100212056899999
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEEECCEEEEEEEECCCCCCCCCC--------------
Q ss_conf 999999999998503787368877553200044058999999998599799998113688767446--------------
Q gi|254780124|r 77 MASSVSMVLAYVRTFSGPFLSETEVPLEPFTTEPGATGTADILIFNSTQWIIVDFKYGAGVPVKAE-------------- 142 (388)
Q Consensus 77 ~~~~v~~~~~~~r~~~~~~~ve~E~~~~~~~~~~~~~GtiD~I~~~dg~l~IiDyKtGk~~~v~a~-------------- 142 (388)
....+..+..... .......+.|+.+....++..+.|++|+|+ +.+.|+|||||+.+.....
T Consensus 94 ~~~~~~~~~~~~~-~~~~~~~~~E~~~~~~~~g~~l~GriD~id---~~~~IiDyKT~~~~~~~~~~~~~~~~~~~~~~~ 169 (266)
T 3l0a_A 94 AEEIIARIERDEY-FXKYXSGQKQVIXTGELFGAKWKIKXDSYI---PGVAIVDLKVXASITDLKWVKDIGYLDFVRYWG 169 (266)
T ss_dssp HHHHHHHHHTCHH-HHHHTTSEEEEEEEEEETTEEEEEEEEEEE---TTTEEEEEEEESCSSCCEEETTTEEECHHHHTT
T ss_pred HHHHHHHHHHCCH-HHHHCCCCEEEEEEEEECCEEEEEEEEEEE---CCCEEEEEEECCCCCHHHCCCCHHHHHHHHHCC
T ss_conf 9999999995704-566435763789999876937651467993---687599954336565221244112355788608
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 68799999999998438356765138999998304887754302589889999999999999999857765304776678
Q gi|254780124|r 143 NNTQLMLYACGALHQYGDIFGRPEALTLTIIQPRVRTGSPINEWVISADDLLEKAKEFKERGTLALSLKSKRAVSLEHYG 222 (388)
Q Consensus 143 ~n~QL~lYALgA~~~~~~~~~~~~~v~~~I~qpr~~~~~~vs~~~~s~eeL~~~~~~v~~~a~~~~~~~a~~~~~~~~~~ 222 (388)
...||.+|++++.+.++.. +.+.++..+......+.+.+++.+.+....+.+...+..+... ..+.+++
T Consensus 170 y~~Ql~~Y~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~~~-----~~~~~~p 238 (266)
T 3l0a_A 170 YDIQGAVYQEIVRQNTGEK------LPFFIAGATKQTEPDIRIIHVTDNYLQEALHXVEXNXPRILRV-----KNGEVEP 238 (266)
T ss_dssp HHHHHHHHHHHHHHHHSCC------CCEEEEEEECSSSCCEEEEEECHHHHHHHHHHHHHHHHHHHHH-----HTTSSCC
T ss_pred HHHHHHHHHHHHHHHHCCC------CCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH-----HCCCCCC
T ss_conf 3999999999999986898------7359999977898732388479899999999999999999999-----7598479
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8866667257644562013467876
Q gi|254780124|r 223 VNDDSCRFCRAKVRCPALSRHVLLE 247 (388)
Q Consensus 223 ~~g~~CrfC~~k~~Cra~a~~~l~~ 247 (388)
.++++|+||+|+..|...-..+...
T Consensus 239 ~~~~~C~~C~~~~~c~~~~~~~~~~ 263 (266)
T 3l0a_A 239 DRCELCDCCRHNRVLKKPISIXDLT 263 (266)
T ss_dssp CCCSCSHHHHHHCCCCSCCCHHHHH
T ss_pred CCCCCCCCCCCCCHHCCCCCHHHHH
T ss_conf 9999798861011011201199983