HHsearch alignment for GI: 254780125 and conserved domain: pfam03374

>pfam03374 ANT Phage antirepressor protein KilAC domain. This domain was called the KilAC domain by Iyer and colleagues.
Probab=99.41  E-value=6.7e-13  Score=108.10  Aligned_cols=98  Identities=17%  Similarity=0.107  Sum_probs=81.0

Q ss_pred             HHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHCC--CCCC
Q ss_conf             30234200134666541558732399999973899888999999997897685379944365789754355304--7534
Q gi|254780125|r  155 TGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD--VPMQ  232 (262)
Q Consensus       155 ~~i~~~~pk~~~~d~~~~~~~~l~~t~iak~l~~~~sa~~~N~lL~~~g~q~Rk~~~~W~lt~kg~~~g~~~~~--~p~~  232 (262)
T Consensus         3 ~~i~~~~PKv~~~D~~~~~~~~~~i~~~AK~l~--i~~~~L~~~L~~~~~l~r~~~~~~~pyq~~i~~Gyf~~k~~~~~~   80 (112)
T pfam03374         3 QQLAEAAPKAEYADAIAASDGLVLVGQIAKLLG--IGENRLFKWLRENGILYRRGSGRWLPYQKHIEKGYFEVKTGVITR   80 (112)
T ss_pred             HHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHC--CCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCEEEEEEEEEC
T ss_conf             588771852699999975799587999999929--999999999998892898899975224789859988999999875


Q ss_pred             CC--CCCCEEEEECHHHHHHHHHHH
Q ss_conf             68--833116754501776565310
Q gi|254780125|r  233 HV--EGSTQQLKWNSNLLVSFLQNE  255 (262)
Q Consensus       233 ~~--g~~~~q~~w~~~v~~~~~~~~  255 (262)
T Consensus        81 ~~G~~~~~~~t~vT~KG~~-~i~~~  104 (112)
T pfam03374        81 SDGTEHIKPTTKVTPKGQL-WIYEL  104 (112)
T ss_pred             CCCCEEEEEEEEEECHHHH-HHHHH
T ss_conf             8998788777799550799-99999