HHsearch alignment for GI: 254780125 and conserved domain: pfam03374
>pfam03374 ANT Phage antirepressor protein KilAC domain. This domain was called the KilAC domain by Iyer and colleagues.
Probab=99.41 E-value=6.7e-13 Score=108.10 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=81.0
Q ss_pred HHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHCC--CCCC
Q ss_conf 30234200134666541558732399999973899888999999997897685379944365789754355304--7534
Q gi|254780125|r 155 TGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD--VPMQ 232 (262)
Q Consensus 155 ~~i~~~~pk~~~~d~~~~~~~~l~~t~iak~l~~~~sa~~~N~lL~~~g~q~Rk~~~~W~lt~kg~~~g~~~~~--~p~~ 232 (262)
T Consensus 3 ~~i~~~~PKv~~~D~~~~~~~~~~i~~~AK~l~--i~~~~L~~~L~~~~~l~r~~~~~~~pyq~~i~~Gyf~~k~~~~~~ 80 (112)
T pfam03374 3 QQLAEAAPKAEYADAIAASDGLVLVGQIAKLLG--IGENRLFKWLRENGILYRRGSGRWLPYQKHIEKGYFEVKTGVITR 80 (112)
T ss_pred HHHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHC--CCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCEEEEEEEEEC
T ss_conf 588771852699999975799587999999929--999999999998892898899975224789859988999999875
Q ss_pred CC--CCCCEEEEECHHHHHHHHHHH
Q ss_conf 68--833116754501776565310
Q gi|254780125|r 233 HV--EGSTQQLKWNSNLLVSFLQNE 255 (262)
Q Consensus 233 ~~--g~~~~q~~w~~~v~~~~~~~~ 255 (262)
T Consensus 81 ~~G~~~~~~~t~vT~KG~~-~i~~~ 104 (112)
T pfam03374 81 SDGTEHIKPTTKVTPKGQL-WIYEL 104 (112)
T ss_pred CCCCEEEEEEEEEECHHHH-HHHHH
T ss_conf 8998788777799550799-99999