BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780125|ref|YP_003064538.1| prophage antirepressor
[Candidatus Liberibacter asiaticus str. psy62]
(262 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780125|ref|YP_003064538.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039802|gb|ACT56598.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|317120696|gb|ADV02519.1| putative Bro-N family phage antirepressor [Liberibacter phage SC1]
gi|317120739|gb|ADV02561.1| putative Bro-N family phage antirepressor [Liberibacter phage SC2]
gi|317120800|gb|ADV02621.1| putative Bro-N family phage antirepressor [Liberibacter phage SC2]
gi|317120840|gb|ADV02661.1| putative Bro-N family phage antirepressor [Liberibacter phage SC1]
Length = 262
Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE
Sbjct: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS
Sbjct: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT
Sbjct: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ
Sbjct: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
Query: 241 LKWNSNLLVSFLQNELINTPRL 262
LKWNSNLLVSFLQNELINTPRL
Sbjct: 241 LKWNSNLLVSFLQNELINTPRL 262
>gi|315121965|ref|YP_004062454.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495367|gb|ADR51966.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/251 (72%), Positives = 207/251 (82%), Gaps = 3/251 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I PFEFESN+IRT+VD+D I FVAKD+A ALGY+NSNEA+N HCKGV KRYPLKT+GGI
Sbjct: 6 IIPFEFESNRIRTVVDEDNTILFVAKDIAEALGYKNSNEAVNEHCKGVVKRYPLKTDGGI 65
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
QKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS++ KL SA+T++
Sbjct: 66 QKVRVILESDVYRLIVKSKLPSAEKFERWVFEEVLPTLRKTGSYSIKPQKL--PSATTIM 123
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
R HKHLE LAKQAGLKDNQLLLKVNRGVTKITGVDQLE MDIKHL S DNDEYL T+IG
Sbjct: 124 RFHKHLEVLAKQAGLKDNQLLLKVNRGVTKITGVDQLEVMDIKHLLSPDNDEYLAPTEIG 183
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSK-VSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLK 242
+ LNP +A+ LN L GLQ+ K G+ PTPKGEE GGKMCDV +QHVEGST LK
Sbjct: 184 KSLNPVIKAKALNSWLTYLGLQIPKHTKKGFLPTPKGEELGGKMCDVALQHVEGSTPYLK 243
Query: 243 WNSNLLVSFLQ 253
WN ++V +LQ
Sbjct: 244 WNPKVIVPYLQ 254
>gi|315122933|ref|YP_004063422.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496335|gb|ADR52934.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 264
Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 182/252 (72%), Positives = 208/252 (82%), Gaps = 4/252 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGG 62
I PFEFESN+IRT+VD+D I FVAKD+A ALGYENS++AIN HCKGV KRYP+ + G
Sbjct: 6 IIPFEFESNRIRTVVDEDNTILFVAKDIAEALGYENSSKAINDHCKGVTKRYPIVDSLGR 65
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
QKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS++ KL SA+T+
Sbjct: 66 TQKVRVILESDVYRLMVKSKLPSAEKFERWVFEEVLPTLRKTGSYSIKPQKL--PSATTI 123
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
+R HKHLE LAKQAGLKDNQLLLKVNRGVTKITGVDQLE MDIKHL S DNDEYLT T I
Sbjct: 124 MRFHKHLEVLAKQAGLKDNQLLLKVNRGVTKITGVDQLEVMDIKHLLSPDNDEYLTPTAI 183
Query: 183 GERLNPPQRARFLNKLLLKRGLQVSKVSG-GYRPTPKGEERGGKMCDVPMQHVEGSTQQL 241
GE LNP +A+ LN + GLQ+SK +G GY PTPKGEE GGKMCDVP+QHVEGSTQ L
Sbjct: 184 GELLNPVIKAKALNSWMTYLGLQISKHTGKGYIPTPKGEELGGKMCDVPLQHVEGSTQSL 243
Query: 242 KWNSNLLVSFLQ 253
KWN +++ +LQ
Sbjct: 244 KWNPKVIIPYLQ 255
>gi|315122913|ref|YP_004063402.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496315|gb|ADR52914.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 261
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 176/257 (68%), Gaps = 12/257 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I PFEFESNKIRT+VDKD I FVAKD+A ALGY+NSNEA+N HCKGV KRYPLKT+
Sbjct: 1 MSNIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGYKNSNEAVNEHCKGVVKRYPLKTD 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS+ PK +
Sbjct: 61 GGIQKVRVILESDVYRLIVKSKLPSAEKFERWVFEEVLPTLRKTGSYSINPPKPQVFITG 120
Query: 121 TVLRVHKHLEE----LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+L+ + L + L ++AG+ +NQ+L+ +R + + GV+ +DI P+ +N +Y
Sbjct: 121 GLLKELRLLTDNHGNLMRKAGIDENQILIASSRVMESVLGVNPANTLDI---PTPNNSQY 177
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRG-LQVSKVSGGYRP---TPKGEERGGKMCDVPMQ 232
T T +GE+L R +NK L++ G L V G R T KG+E GG++ D +
Sbjct: 178 YTATALGEQLPVKLSGREINKRLVRLGFLLVEHEPSGKRRNILTTKGKELGGRVFDSGKK 237
Query: 233 HVEGS-TQQLKWNSNLL 248
H +GS Q +KW N+L
Sbjct: 238 HSDGSIVQSIKWQENIL 254
>gi|315121946|ref|YP_004062435.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495348|gb|ADR51947.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 262
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/258 (48%), Positives = 168/258 (65%), Gaps = 13/258 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
MS+I PFEFESNKIRT+VDKD I FVAKD+A ALGY+ N+A+N HC G K P+ +
Sbjct: 1 MSSIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGYKRPNDAVNEHCDGTVKHRPIVDS 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G QK R+I EPDVYRL+VKS LPSAQKFERW+FEEVLPTLRKTGSYS++ PK +
Sbjct: 61 LGRKQKTRVIKEPDVYRLIVKSKLPSAQKFERWIFEEVLPTLRKTGSYSIKPPKPQVFIT 120
Query: 120 STVLRVHKHLEE----LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+L+ + L + L ++AG+ +NQ+L+ +R + + GV+ +DI P+ +N +
Sbjct: 121 GGLLKELRLLTDNHGNLMRKAGIDENQILIASSRVMESVLGVNPANTLDI---PTPNNSQ 177
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRG-LQVSKVSGGYRP---TPKGEERGGKMCDVPM 231
Y T T +GE+L R +NK L++ G L V G R T KG+E GG++ D
Sbjct: 178 YYTATALGEQLPVKLSGREINKRLVRLGFLLVEHEPSGKRRNILTTKGKELGGRVFDSGK 237
Query: 232 QHVEGS-TQQLKWNSNLL 248
+H +GS Q +KW N+L
Sbjct: 238 KHSDGSIVQSIKWQENIL 255
>gi|255957589|dbj|BAH96644.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957604|dbj|BAH96656.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/100 (98%), Positives = 98/100 (98%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY PTPKGEE
Sbjct: 1 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYIPTPKGEEY 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL
Sbjct: 61 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 100
>gi|255957559|dbj|BAH96620.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957564|dbj|BAH96624.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957569|dbj|BAH96628.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957574|dbj|BAH96632.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957579|dbj|BAH96636.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957584|dbj|BAH96640.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957594|dbj|BAH96648.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/100 (87%), Positives = 93/100 (93%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLT+T+IGERLNPP AR LNKLLL+ G Q++ + GGYRPTPKGEER
Sbjct: 1 MDIKHLPSSDNDEYLTVTEIGERLNPPFSARCLNKLLLQLGFQINNLLGGYRPTPKGEER 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL
Sbjct: 61 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 100
>gi|255957554|dbj|BAH96616.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957599|dbj|BAH96652.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957609|dbj|BAH96660.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957614|dbj|BAH96664.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957619|dbj|BAH96668.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957624|dbj|BAH96672.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957629|dbj|BAH96676.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957634|dbj|BAH96680.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957639|dbj|BAH96684.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957644|dbj|BAH96688.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957649|dbj|BAH96692.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957654|dbj|BAH96696.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957659|dbj|BAH96700.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957664|dbj|BAH96704.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957669|dbj|BAH96708.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957674|dbj|BAH96712.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957679|dbj|BAH96716.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957684|dbj|BAH96720.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 90/100 (90%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY PTPKGEE
Sbjct: 1 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYIPTPKGEEY 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPM HVEGSTQ LKWNS+LLV +LQNE N L
Sbjct: 61 GGKMCDVPMHHVEGSTQSLKWNSSLLVPYLQNEFNNNQHL 100
>gi|71899745|ref|ZP_00681896.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730440|gb|EAO32520.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 251
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 146/257 (56%), Gaps = 16/257 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF FES+ +RT+VD +WFV DVAT LGY N ++A++AHCKG AKR PL+T
Sbjct: 1 MNAITPFHFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GGIQK+RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 61 GGIQKIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 120
Query: 119 ASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
V + + ++K G+K L + T +T + A+ P
Sbjct: 121 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC---- 176
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQHV 234
L TQ+G+RL+ A+ +N+LL RG Q + T E G C+ +P
Sbjct: 177 LLNATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELT----EAGRVWCEAIPYSRN 230
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ QL WN ++
Sbjct: 231 GHSSYQLLWNPEVIACL 247
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1]
gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 262
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 148/257 (57%), Gaps = 16/257 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ +TPF+FES+ +RT+VD +WFV DVAT LGY N ++A++AHCKG AKR PL+T
Sbjct: 12 MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 71
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GGIQ++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 72 GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 131
Query: 119 ASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
V + + ++K G+K L + T +T + A+ P
Sbjct: 132 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC---- 187
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQHV 234
L TQ+G+RL+ A+ +N+LL RG Q + T E G C+ +P
Sbjct: 188 LLNATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELT----EAGRVWCEAIPYSRN 241
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 242 GHSSYQLLWNPDVIACL 258
>gi|71898928|ref|ZP_00681095.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731340|gb|EAO33404.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 387
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 145/255 (56%), Gaps = 12/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 137 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTP 196
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 197 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 256
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDEY 176
V + + ++K G+K + + I L +I+ LP+ D
Sbjct: 257 QDRVAALLLIGQFVSKVPGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLCM 313
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 314 LNATQLGKQLH--CSAKEANQLLASAGLQFRNERDEWALTEAGRVWGEA---IPYSRNGH 368
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 369 SSYQILWNPTVLDSL 383
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR
Sbjct: 1 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALELLNPRAALAQHVDAENVSKRKT 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 61 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHII 113
>gi|182681747|ref|YP_001829907.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182682342|ref|YP_001830502.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057123|gb|AAO28988.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631857|gb|ACB92633.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182632452|gb|ACB93228.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307578623|gb|ADN62592.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
gi|307580176|gb|ADN64145.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 535
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 88/106 (83%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 167 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTS 226
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+
Sbjct: 227 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGN 272
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 16/257 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 284 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDA 343
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 344 LGRTQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 403
Query: 118 SASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ V + + ++K G+K L + T +T + A+ P
Sbjct: 404 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC--- 460
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
L TQ+G++L+ +A +N+LL GLQ + T G G +P
Sbjct: 461 -LLNATQLGKQLHCSAKA--VNQLLASSGLQFRNERDDWELTEAGRVWGEA---IPYSRN 514
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 515 GHSSYQILWNPTVVDSL 531
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R +D+ + WF A D+ AL N A+ H + V+KR + T G +
Sbjct: 41 LQFESHAVRVQLDEHKRRWFNANDICAALELLNPRAALAQHVDAENVSKRAAIDTIGRTK 100
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
V ++E VY LL+ ST +A++F +W+ E
Sbjct: 101 HVNYLNESGVYALLIGSTKEAAKRFRQWLISE 132
>gi|28199601|ref|NP_779915.1| hypothetical protein PD1726 [Xylella fastidiosa Temecula1]
gi|77747679|ref|NP_779339.2| hypothetical protein PD1133 [Xylella fastidiosa Temecula1]
gi|28057716|gb|AAO29564.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 503
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 88/106 (83%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTS 194
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+
Sbjct: 195 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGN 240
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 16/257 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 252 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDA 311
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 312 LGRTQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 371
Query: 118 SASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ V + + ++K G+K L + T +T + A+ P
Sbjct: 372 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC--- 428
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
L TQ+G++L+ +A +N+LL GLQ + T G G +P
Sbjct: 429 -LLNATQLGKQLHCSAKA--VNQLLASSGLQFRNERDDWELTEAGRVWGEA---IPYSRN 482
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 483 GHSSYQILWNPTVVDSL 499
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R +D+ + WF A D+ AL N A+ H + V+KR + T G +
Sbjct: 9 LQFESHAVRVQLDEHKRRWFNANDICAALELLNPRAALAQHVDAENVSKRAAIDTIGRTK 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
V ++E VY LL+ ST +A++F +W+ E
Sbjct: 69 HVNYLNESGVYALLIGSTKEAAKRFRQWLISE 100
>gi|71901490|ref|ZP_00683577.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728746|gb|EAO30890.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 412
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ AHCKGVAK YP+
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYANHNDALGAHCKGVAKCYPIPDS 220
Query: 61 -GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G +++ RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L
Sbjct: 221 LGRLRETRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGP 280
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ + + + ++ G+K + + I L +I+ LP+ D
Sbjct: 281 TQDRIAALLLIGQYISTVPGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 337
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 338 MLNATQLGKQLH--CSAKEANQLLASAGLQFRNERDEWALTEAGRVWGEA---IPYSRNG 392
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 393 HSSYQILWNPTVLDSL 408
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ AL N A+ H + V+KR
Sbjct: 27 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICAALELLNPRAALAQHVGAENVSKRKT 86
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+ G + ++E VY LL+ ST +A++F RW+ E
Sbjct: 87 INAVGWTKHANYLNESGVYALLIGSTKAAAKRFRRWLISE 126
>gi|273810427|ref|YP_003344898.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097802|gb|ACV41108.1| Bro-N family protein [Xylella phage Xfas53]
Length = 431
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 139/256 (54%), Gaps = 13/256 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP+
Sbjct: 180 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPIPDS 239
Query: 61 -GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G ++ RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L
Sbjct: 240 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGP 299
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ V + + ++K G+K + + I L +I+ LP+ D
Sbjct: 300 TQDRVAALLLIGQFVSKVTGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 356
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 357 MLNATQLGKQLH--CSAKAANQLLASSGLQFRNERDAWELTEAGRMWGEA---IPYSRNG 411
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 412 HSSYQILWNPTVVDSL 427
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR + T G +
Sbjct: 54 LQFESHAVRVQLDEHERRWFNANDICTALELLNPCAALAHHVDAENVSKRAAIDTIGRTK 113
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
V ++E VY LL+ ST +A++F +W+ E
Sbjct: 114 HVNYLNESGVYALLIGSTKEAAKRFRQWLTSE 145
>gi|15837286|ref|NP_297974.1| hypothetical protein XF0684 [Xylella fastidiosa 9a5c]
gi|9105566|gb|AAF83494.1|AE003912_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 503
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/106 (63%), Positives = 85/106 (80%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HCKGV KRYPL+T
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCKGVPKRYPLQTP 194
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
GGIQ++RIISEPD+ RL+V S LP+A++FERWV EVLPT+ KTG+
Sbjct: 195 GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVTSEVLPTIHKTGN 240
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV + L + N +AI +H + V K
Sbjct: 252 NAITPFQFESKDVRIQLDEASAPWFNANDVCSILEFGNPRQAIESHVDVEDVQKLDATDN 311
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G ++ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 312 LGRTRQTNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 371
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ + + + ++ G+K + + I L +I+ LP+ D
Sbjct: 372 TQDRIAALLLIGQYISTVPGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 428
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ +N+LL RGLQ + T G G +P
Sbjct: 429 MLNATQLGKQLH--CSAKAVNQLLASRGLQFRNERDDWELTEAGRVWGEA---IPYSRNG 483
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 484 HSSYQILWNPTVVDSL 499
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR + T G Q
Sbjct: 9 LQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKIIDTIGRTQ 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEAPKLRATSAST 121
+ ++EP V LL+ ST +A++ RW+ E LP ++K G +SV P+ A S ST
Sbjct: 69 RANYLNEPGVLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSV--PQHHAPSIST 125
>gi|15838264|ref|NP_298952.1| hypothetical protein XF1663 [Xylella fastidiosa 9a5c]
gi|9106723|gb|AAF84472.1|AE003992_8 phage-related protein [Xylella fastidiosa 9a5c]
Length = 381
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF FES +RT+VD +WFV KDVA LGY N N+A+ AHCKGVAKRYPL +
Sbjct: 12 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYANHNDALGAHCKGVAKRYPLPDS 71
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G +Q RIISEPD++RL+ S LP+A++FERWVFE VLPT+ KTG+ S
Sbjct: 72 LGRLQYFRIISEPDMFRLIAGSKLPAAERFERWVFEGVLPTIHKTGNRSA 121
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 18/258 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N+++AI +H + K + T
Sbjct: 130 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNAHQAIESHVDVDDLQKLEVIDT 189
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 190 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 249
Query: 118 SASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ V + + ++K G+K L + T +T + A+ P
Sbjct: 250 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC--- 306
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQH 233
L TQ+G+RL+ +A +N+LL G Q + T E G C+ +P
Sbjct: 307 -LLNATQLGKRLHCSAKA--VNQLLASAGFQFRNERDEWELT----EAGRVWCEAIPYSR 359
Query: 234 VEGSTQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 360 NGHSSYQLLWNPDVIACL 377
>gi|71276718|ref|ZP_00652986.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71276734|ref|ZP_00653001.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900867|ref|ZP_00682983.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71902520|ref|ZP_00684445.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162461|gb|EAO12196.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71162476|gb|EAO12210.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71727755|gb|EAO30023.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729338|gb|EAO31453.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 370
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF FES +RT+VD +WFV KDVA LGY N N+A+ HCKGVAKRYPL +
Sbjct: 1 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCKGVAKRYPLPDS 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
G +Q RIISEPD++RL+ S LP+A++FERWVFE VLPT+RKTG+
Sbjct: 61 LGRLQYFRIISEPDMFRLIAGSKLPAAERFERWVFEGVLPTIRKTGN 107
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 121/257 (47%), Gaps = 18/257 (7%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 120 AITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDAL 179
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L +
Sbjct: 180 GRTQRTNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGPT 239
Query: 119 ASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ + + ++ G+K L + T +T + A+ P
Sbjct: 240 QDRIAALLLIGQYISTVPGMKPGIAAAATLACIKSNTNLTTEEIRRALPALQEPLC---- 295
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD-VPMQHV 234
L TQ+G+RL+ +A +N+LL RG Q + T E G C+ +P
Sbjct: 296 LLNATQLGKRLHCSAKA--VNQLLASRGFQFRNERDEWELT----EAGRVWCEAIPYSRN 349
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 350 GHSSYQLLWNPDVIACL 366
>gi|320352343|ref|YP_004193682.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120845|gb|ADW16391.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 252
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M ITPF F + +RT+ D WFVAKDVA LGY N+ +AI+ HCKGV K YPL+T
Sbjct: 1 MPEITPFCFNDSMVRTLT-IDNAPWFVAKDVAELLGYANTKDAISRHCKGVVKHYPLRTA 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
GGIQ++RII+EP++YRL+ S LP+A+KFE W++EEVLP++RKTGSYS
Sbjct: 60 GGIQEIRIINEPNLYRLVAHSKLPAAEKFEAWIYEEVLPSIRKTGSYS 107
>gi|77747608|ref|NP_299802.2| hypothetical protein XF2524 [Xylella fastidiosa 9a5c]
Length = 504
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP L +
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPILDS 194
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
G ++ RIISEPD+ RL+V S LP+A++FERWVFEE+LPTLRKTG+
Sbjct: 195 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTGN 241
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 119/267 (44%), Gaps = 36/267 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG--VAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K +
Sbjct: 253 NAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVIDA 312
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----------- 108
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS
Sbjct: 313 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 372
Query: 109 ----VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
+ A L STV V + A A +K N T +T + +
Sbjct: 373 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSN----------TNLTTEEIRRVLP 422
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGG 224
P L TQ+G++L+ A+ N+LL GLQ + T G G
Sbjct: 423 ALQEPLC----MLNATQLGKQLH--CSAKEANQLLASAGLQFRNERDDWELTEAGRVWGE 476
Query: 225 KMCDVPMQHVEGSTQQLKWNSNLLVSF 251
+P S+ Q+ WN ++ S
Sbjct: 477 A---IPYSRNGHSSYQILWNPTVVDSL 500
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR + T G Q
Sbjct: 9 LQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKIIDTIGRTQ 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEAPKLRATSAST 121
+ ++EP + LL+ ST +A++ RW+ E LP ++K G +SV P+ A S ST
Sbjct: 69 RANYLNEPGMLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSV--PQHHAPSVST 125
>gi|9107730|gb|AAF85322.1|AE004059_12 phage-related protein [Xylella fastidiosa 9a5c]
Length = 530
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP L +
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPILDS 220
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
G ++ RIISEPD+ RL+V S LP+A++FERWVFEE+LPTLRKTG+
Sbjct: 221 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTGN 267
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG--VAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K +
Sbjct: 279 NAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVIDA 338
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 339 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 398
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ + + + ++ G+K + + I L +I+ LP+ +
Sbjct: 399 TQDRIAALLLIGQYISTVPGVKPG---IAAAATLACIKSNTNLTTEEIRRVLPALQEPLC 455
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 456 MLNATQLGKQLH--CSAKEANQLLASAGLQFRNERDDWELTEAGRVWGEA---IPYSRNG 510
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 511 HSSYQILWNPTVVDSL 526
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR + T G Q
Sbjct: 35 LQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKIIDTIGRTQ 94
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEAPKLRATSAST 121
+ ++EP + LL+ ST +A++ RW+ E LP ++K G +SV P+ A S ST
Sbjct: 95 RANYLNEPGMLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSV--PQHHAPSVST 151
>gi|144898901|emb|CAM75765.1| BRO, N-terminal [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 10/161 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ I PFEFE + IR +VD D WFV KDVA LGY N+ +AIN HC+GVAKRYP+
Sbjct: 1 MTNIVPFEFEGSAIR-VVDIDGAPWFVGKDVAERLGYANATDAINKHCRGVAKRYPIIDA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q+ RI+SEPDV RL+V S LP+A +FERWVFEEVLPT+R TG + K +
Sbjct: 60 LGRTQEARILSEPDVLRLIVGSKLPAAVRFERWVFEEVLPTIRTTGGSDIGTTKADDIAQ 119
Query: 120 STVLRVHKHLEELAKQAGLKD---NQLL-----LKVNRGVT 152
V L + +Q G D ++LL L +NR VT
Sbjct: 120 EAARIVLARLGMVPEQIGALDGKVDRLLTVTNELAMNRRVT 160
>gi|269976757|ref|ZP_06183732.1| Bro family antirepressor [Mobiluncus mulieris 28-1]
gi|269934954|gb|EEZ91513.1| Bro family antirepressor [Mobiluncus mulieris 28-1]
Length = 255
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
+ +IRTI + D I F +DVA+ALGY N N+A+ HCKGV RYPL+T GGIQ++R I
Sbjct: 13 QFGQIRTITN-DGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETSGGIQQIRFI 71
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y++
Sbjct: 72 TEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAI 111
>gi|307700655|ref|ZP_07637683.1| BRO family, N-terminal domain protein [Mobiluncus mulieris
FB024-16]
gi|307614185|gb|EFN93426.1| BRO family, N-terminal domain protein [Mobiluncus mulieris
FB024-16]
Length = 255
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
+ +IRTI + D I F +DVA+ALGY N N+A+ HCKGV RYPL+T GGIQ++R I
Sbjct: 13 QFGQIRTITN-DGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETSGGIQQIRFI 71
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y++
Sbjct: 72 TEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAI 111
>gi|306818119|ref|ZP_07451850.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
gi|304649083|gb|EFM46377.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
Length = 267
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
+ +IRTI + D I F +DVA+ALGY N N+A+ HCKGV RYPL+T GGIQ++R I
Sbjct: 25 QFGQIRTITN-DGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETSGGIQQIRFI 83
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y++
Sbjct: 84 TEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAI 123
>gi|281358555|ref|ZP_06245034.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281314903|gb|EFA98937.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 304
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
Query: 7 FEFE-SNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
F FE S IR I +D +Q WFV KDV LGY N +A++ HCKG+ KRYPL+T GG Q
Sbjct: 9 FNFEESTPIRVITIDGEQ--WFVGKDVCQVLGYTNPAKAMSDHCKGITKRYPLETAGGKQ 66
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+VRI+SE DV RL+ S LP+AQKFERWVFEEVLP +R+TGSY+
Sbjct: 67 EVRILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAA 111
>gi|281357128|ref|ZP_06243617.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281316159|gb|EFB00184.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 357
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
Query: 4 ITPFEFE-SNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
++ F FE S IR I +D +Q WFV KDV LGY N +A++ HCKG+ KRYPL+T G
Sbjct: 6 LSVFNFEESTPIRVITIDGEQ--WFVGKDVCQVLGYTNPAKAMSDHCKGITKRYPLETAG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G Q+VRI+SE DV RL+ S LP+AQKFERWVFEEVLP +R+TGSY+
Sbjct: 64 GKQEVRILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYAA 111
>gi|50843068|ref|YP_056295.1| Bro family antirepressor [Propionibacterium acnes KPA171202]
gi|50840670|gb|AAT83337.1| putative antirepressor (Bro family) [Propionibacterium acnes
KPA171202]
gi|313813470|gb|EFS51184.1| BRO family protein [Propionibacterium acnes HL025PA1]
gi|315106935|gb|EFT78911.1| BRO family protein [Propionibacterium acnes HL030PA1]
Length = 253
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E IRTI Q I F KDVATALGY N+ +A+ HCKGV YPL+T GG+Q+VR I
Sbjct: 12 EFGTIRTITSSGQ-ILFCGKDVATALGYANTKDALARHCKGVVNHYPLETAGGVQQVRFI 70
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
SE D+YRL+V S LP+AQKFE WVF+EVLPT+R+ G Y+++
Sbjct: 71 SEGDLYRLIVTSKLPAAQKFETWVFDEVLPTIRRHGIYAID 111
>gi|239621455|ref|ZP_04664486.1| prophage antirepressor [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239515916|gb|EEQ55783.1| prophage antirepressor [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 255
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 84/134 (62%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PFEF N + T+ ++ + F AK VATALGY+ +A+ HCKG R PL+T G
Sbjct: 4 SNVQPFEFRGNPVATVTAENGTVLFCAKHVATALGYKRPADAVKQHCKGSVIRRPLETAG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
GIQ++ I+E DVYRL+ S LPSA +FE W+F+EV+P +R+TG Y + T A
Sbjct: 64 GIQQMVFITEGDVYRLIASSKLPSAVEFEHWLFDEVVPQIRRTGGYIPQGETPEETMARA 123
Query: 122 VLRVHKHLEELAKQ 135
VL K +E+ KQ
Sbjct: 124 VLIAQKTIEDQRKQ 137
>gi|227875065|ref|ZP_03993210.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35243]
gi|304390308|ref|ZP_07372261.1| Bro family antirepressor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|306817352|ref|ZP_07451097.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
gi|227844343|gb|EEJ54507.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35243]
gi|304326064|gb|EFL93309.1| Bro family antirepressor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304649793|gb|EFM47073.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
Length = 254
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
IRTI + D I F KDVATALGY++ A+ HCKGVA +PL+T GGIQ+VR I+E D
Sbjct: 16 IRTITN-DGQILFCGKDVATALGYQDPTNAVKLHCKGVANYHPLETAGGIQQVRFITEGD 74
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+YRL++ S LP+AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 75 LYRLIISSKLPAAQKFEAWVFDEVLPTIRRHGMYAYD 111
>gi|293572132|ref|ZP_06683139.1| phage anti-repressor protein [Enterococcus faecium E980]
gi|291607786|gb|EFF37101.1| phage anti-repressor protein [Enterococcus faecium E980]
Length = 248
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 28/214 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT ++ D +FVA DVA LGY+N ++A N HCK K + +
Sbjct: 1 MNTPQIFNFEQNEVRTFLENDIP-YFVANDVAKTLGYKNPSDATNKHCKKAVKTWGSDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS P+ S +
Sbjct: 60 GRRQSFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-NVPQ----SFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLL-LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE NQLL ++ KI+ +D + L S+D +
Sbjct: 115 QALRLAADLEE--------KNQLLEQQIAEYEPKISYLDTI-------LSSTDT---VAT 156
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+QI A LNKLL + G+Q KVSG +
Sbjct: 157 SQIAADYG--MSAIALNKLLNELGVQ-HKVSGQW 187
>gi|257891044|ref|ZP_05670697.1| BRO [Enterococcus faecium 1,231,410]
gi|257894297|ref|ZP_05673950.1| BRO [Enterococcus faecium 1,231,408]
gi|260562313|ref|ZP_05832827.1| anti-repressor protein [Enterococcus faecium C68]
gi|257827404|gb|EEV54030.1| BRO [Enterococcus faecium 1,231,410]
gi|257830676|gb|EEV57283.1| BRO [Enterococcus faecium 1,231,408]
gi|260073237|gb|EEW61578.1| anti-repressor protein [Enterococcus faecium C68]
Length = 248
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 120/214 (56%), Gaps = 28/214 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT ++ D +FVA DVA LGY+N ++A N HCK K + +
Sbjct: 1 MNTPQIFNFEQNEVRTFLENDIP-YFVANDVAKTLGYKNPSDATNKHCKKAVKTWGSDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS P+ S +
Sbjct: 60 GRRQSFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-NVPQ----SFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLL-LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE NQLL ++ KI+ +D + L S+D +
Sbjct: 115 QALRLAADLEE--------KNQLLEQQIAEYEPKISYLDTI-------LSSTDT---VAT 156
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+QI A LNKLL + G+Q KVSG +
Sbjct: 157 SQIAADYG--MSAIALNKLLNELGVQ-HKVSGQW 187
>gi|315656934|ref|ZP_07909821.1| Bro family antirepressor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492889|gb|EFU82493.1| Bro family antirepressor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 254
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
IRTI D I F KDVATALGY++ A+ HCKGVA +PL+T GGIQ+VR I+E +
Sbjct: 16 IRTIT-TDGQILFCGKDVATALGYQDPTNAVKLHCKGVANYHPLETAGGIQQVRFITEGN 74
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+YRL++ S LP+AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 75 LYRLIISSKLPAAQKFEAWVFDEVLPTIRRHGMYAYD 111
>gi|69244685|ref|ZP_00602949.1| BRO, N-terminal [Enterococcus faecium DO]
gi|258615809|ref|ZP_05713579.1| prophage antirepressor [Enterococcus faecium DO]
gi|68196276|gb|EAN10705.1| BRO, N-terminal [Enterococcus faecium DO]
Length = 248
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 121/214 (56%), Gaps = 28/214 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE +++RT ++ D +FVA DVA LGY+N ++A N HCK + + +
Sbjct: 1 MNTPQIFSFEQHEVRTFLENDIP-YFVANDVAKTLGYKNPSKATNDHCKKSIETWGNDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G QK ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS P+ S +
Sbjct: 60 GRRQKFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-NVPQ----SFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLL-LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE NQLL ++ KI+ +D + L S+D +
Sbjct: 115 QALRLAADLEE--------KNQLLEQQIAEYEPKISYLDTI-------LSSTDT---VAT 156
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+QI A LNKLL + G+Q KVSG +
Sbjct: 157 SQIAADYG--MSAIALNKLLNELGVQ-HKVSGQW 187
>gi|301170189|emb|CBW29793.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 225
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+SN +R I DK+Q WF A DV LGY NS +AI+ HCK GVAKR T+
Sbjct: 7 FSAFTFKSNSVRVITDKNQEPWFCANDVCDILGYSNSRDAISKHCKTGGVAKR-DTPTKS 65
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 66 AVQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 118
>gi|319775359|ref|YP_004137847.1| prophage antirepressor [Haemophilus influenzae F3047]
gi|329122641|ref|ZP_08251220.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
gi|317449950|emb|CBY86162.1| Possible prophage antirepressor [Haemophilus influenzae F3047]
gi|327472655|gb|EGF18084.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
Length = 214
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 101/192 (52%), Gaps = 24/192 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F++ +RTI D + IWF DV LGY N+ +A+ HCK G+AKRY T GG Q
Sbjct: 10 FNFKNFPVRTITDPNSEIWFCGTDVCDILGYSNAPDALRKHCKPKGIAKRY-TPTVGGEQ 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL---RATSAST 121
++ ISEP++YRL VKS P A+ FE W+FEEVLP +RKTG Y + P L T A +
Sbjct: 69 EMIFISEPNLYRLTVKSRKPEAEPFEEWIFEEVLPQIRKTGKYEISQPALPMPEPTYAQS 128
Query: 122 -----------VLRVHKH----LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+L H+ LE L K L ++ +V VT+ V ++ IK
Sbjct: 129 FSQQDINNLVWLLFSHERMRFLLENLYKPLALFNSPFAPQVYGNVTEYKRVHKIAKPLIK 188
Query: 167 HLPS---SDNDE 175
L SDN E
Sbjct: 189 KLLDKLQSDNPE 200
>gi|227540971|ref|ZP_03971020.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183231|gb|EEI64203.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51866]
Length = 282
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTEGGIQKVRI 68
E IRTI Q + F KDVATALGY N+ +A+ HCKGV YPL+T GGIQ+VR
Sbjct: 12 EFGTIRTITSGGQ-VLFCGKDVATALGYANTKDALARHCKGVVVNHYPLETAGGIQQVRF 70
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
ISE D YRL+V S LP+A++FE WVF++VLP++R G Y+++
Sbjct: 71 ISEGDPYRLIVSSKLPAARQFEAWVFDDVLPSIRLHGMYAID 112
>gi|227489381|ref|ZP_03919697.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090559|gb|EEI25871.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51867]
Length = 282
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTEGGIQKVRI 68
E IRTI Q + F KDVATALGY N+ +A+ HCKGV YPL+T GGIQ+VR
Sbjct: 12 EFGTIRTITAGGQ-VLFCGKDVATALGYANTKDALARHCKGVVVNHYPLETAGGIQQVRF 70
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
ISE D+YRL+V S LP A++FE WVF++VLP++R G Y+++
Sbjct: 71 ISEGDLYRLIVSSKLPVARQFEAWVFDDVLPSIRLHGMYAID 112
>gi|270635191|ref|ZP_06222052.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317460|gb|EFA28953.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 163
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F+S+++R I D +Q WF DV LGY+N+ +A+ HCK G+AKRY T+ G Q
Sbjct: 10 FNFKSSQVRVITDPNQEFWFCGSDVCYILGYKNAPDALAKHCKQGGIAKRY-TPTQSGEQ 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 69 EMIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 118
>gi|226940587|ref|YP_002795661.1| bacteriophage antirepressor [Laribacter hongkongensis HLHK9]
gi|226715514|gb|ACO74652.1| Possible bacteriophage antirepressor [Laribacter hongkongensis
HLHK9]
Length = 201
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQ 64
F F+++ +RT D +WF A DV LGY N+ +AI HC KGVAKR L T+GG Q
Sbjct: 14 FSFDAHVVRTHADATGELWFCATDVCDVLGYRNARDAITKHCREKGVAKRDTL-TDGGKQ 72
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
++ ISEP++YRL+VKS P A++FE WV E+VLP +RKTGSY+ AP S S L+
Sbjct: 73 ELVFISEPNLYRLIVKSRKPEAERFETWVMEDVLPAIRKTGSYAAPAPSPAPKSISADLK 132
Query: 125 VHKHL 129
L
Sbjct: 133 ARFDL 137
>gi|38234699|ref|NP_940466.1| putative DNA-binding bacteriophage protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38200963|emb|CAE50682.1| Putative DNA-binding bacteriophage protein [Corynebacterium
diphtheriae]
Length = 264
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
IRTI D + F KDVATALGY N+++A+ H K V RYPL+T GGIQ+VR I+E D
Sbjct: 16 IRTIT-TDVQMPFCGKDVATALGYVNASKAVQDHYKRVLFRYPLETAGGIQQVRFITEGD 74
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+YRL++ S L +AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 75 LYRLIISSKLSAAQKFEAWVFDEVLPTIRRHGVYAYD 111
>gi|315655979|ref|ZP_07908877.1| phage antirepressor protein [Mobiluncus curtisii ATCC 51333]
gi|315490043|gb|EFU79670.1| phage antirepressor protein [Mobiluncus curtisii ATCC 51333]
Length = 266
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE- 60
IT F F+ ++RT+ D + F KDVAT LGYEN +A+ HCK G KRYP++
Sbjct: 6 ITRFVFDGQELRTLT-VDGDTLFCGKDVATILGYENPTKAVRDHCKKDGGLKRYPIQDSL 64
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G Q+ I+EPD+YRL+ S LP+A+KF+RWVFE+VLPT+RKTG Y+
Sbjct: 65 GRTQEAAFITEPDLYRLITHSKLPTAEKFDRWVFEDVLPTIRKTGMYAT 113
>gi|288870166|ref|ZP_06113150.2| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
gi|288868178|gb|EFD00477.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
Length = 253
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E IRT ++D + F KD+A ALGY+ + +AI AHCKGV P + GGIQ+++ I
Sbjct: 19 EFGSIRTF-EQDGKVLFCGKDIAKALGYQRTADAITAHCKGVCV-LPTPSNGGIQRMKFI 76
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E DVYRL+V S LPSA++FERWVF+EVLP++RK G+Y
Sbjct: 77 PEGDVYRLIVHSKLPSAERFERWVFDEVLPSIRKHGAY 114
>gi|294341350|emb|CAZ89766.1| putative Prophage antirepressor [Thiomonas sp. 3As]
Length = 413
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGG 62
I F F +R + D+ FV KDV ALGY + AI H +GV KR+P+ + G
Sbjct: 184 IIHFAFGGKTVRAVHDESGEPCFVGKDVCDALGYADHINAIKQHSRGVVKRHPIIDSLGR 243
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Q+VR++SEPDV RL+V S LP+A+ FER VFEE+LPT+RKTG YS E
Sbjct: 244 TQEVRVLSEPDVMRLIVSSKLPAAEAFERLVFEEILPTIRKTGRYSAE 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKTEGG 62
I +FE N I + +D ++W+ AK + TALG++ EAI H K G + + T GG
Sbjct: 10 IIRLDFEGNPILVQMGEDGSVWYTAKPLCTALGFKKMAEAIERHVKLGDQQSRGVPTGGG 69
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+Q++ ++E + L+ S + ++F++W+ V+
Sbjct: 70 VQQMMHVNEAGMQALVAASHRVATRRFKKWIAAGVI 105
>gi|304436872|ref|ZP_07396836.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370071|gb|EFM23732.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 250
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 24/252 (9%)
Query: 9 FESNKIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGG 62
FES T+ V D+ +FV KDVA LGY N +AI H + V + + + G
Sbjct: 7 FESTAFGTVRTVLIDKEPYFVGKDVAEILGYTNPQKAIRDHVDDEDRTVNESFTVNGTKG 66
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLRATS 118
+ +I+E +Y L+V S LP+A+KF+RWV EVLP +RKTGSY+V + PK R
Sbjct: 67 L----LINESGLYALIVASKLPAAKKFKRWVTSEVLPAIRKTGSYTVPKLEKNPKYRTRM 122
Query: 119 ASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE-Y 176
T +R V EL K G+KD L K + + GV+ E ++ +P +++D +
Sbjct: 123 IGTAVRDVRSTAAELQKLFGVKDGIALAKATSMIERAYGVEMPEVKEL--IPPAEHDTGF 180
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L T IG +L A+ N LL GLQ+ K+ +R T KG+ G +M P +
Sbjct: 181 LNPTAIGAKLG--ISAKDTNLLLKNAGLQM-KIGKEWRITNKGKNYGEEM---PYERNGH 234
Query: 237 STQQLKWNSNLL 248
S Q++WN +++
Sbjct: 235 SGYQIRWNESVV 246
>gi|315654962|ref|ZP_07907867.1| Bro family antirepressor [Mobiluncus curtisii ATCC 51333]
gi|315490923|gb|EFU80543.1| Bro family antirepressor [Mobiluncus curtisii ATCC 51333]
Length = 270
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL-KTEGGIQKVRI 68
+IRTI + I F AKD+ATALGYEN +A+ HC+ G KRYP+ + G Q+ R
Sbjct: 27 GQIRTITEHGVTI-FCAKDIATALGYENPTKAVRDHCRQDGGPKRYPIIDSLGRTQQARF 85
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y++
Sbjct: 86 ITEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAI 126
>gi|294789953|ref|ZP_06755172.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
gi|294482110|gb|EFG29818.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
Length = 283
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 4 ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
I+ F+F E++ IRTI D+ WF+A DV LGY N +A++ HCK GVAKR TE
Sbjct: 16 ISTFKFSENHSIRTIADEKGEFWFLANDVCGVLGYVNPRDAVSKHCKLKGVAKR-DTPTE 74
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q++ I+EP++YRL++KS P A+ FE WV E+VLPT+RKTGSY
Sbjct: 75 SGNQEMTYINEPNLYRLIIKSRKPEAEAFEEWVMEDVLPTIRKTGSY 121
>gi|295090215|emb|CBK76322.1| Prophage antirepressor [Clostridium cf. saccharolyticum K10]
Length = 245
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 21/216 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E IRT ++D + F KDVA ALGY +AI AHCKGV P + GGIQ+++ I
Sbjct: 11 EFGSIRTF-EQDGKVLFCGKDVAQALGYRRPADAIAAHCKGVCV-LPTPSNGGIQQMKFI 68
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATSASTVLRVHKH 128
E DVYRL+V S LPSA++FERWVF+EVLP++R+ G+Y + E ATS +L++
Sbjct: 69 PEGDVYRLIVHSKLPSAERFERWVFDEVLPSIRQHGAYLTREKLWEVATSPEALLKLCSD 128
Query: 129 -LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN 187
L E K A L+ + L+ K D +D++H S N + + L
Sbjct: 129 LLAEREKNAALQADNARLQ-----GKAVYYDLF--IDLRH---STN-----LRTTAKELE 173
Query: 188 PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
P+R RF+ + LL+R SG P K G
Sbjct: 174 VPER-RFV-RFLLERRYVYRAPSGCVMPYAKSANDG 207
>gi|330977751|gb|EGH77654.1| hypothetical protein PSYAP_13385 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 140
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+TPF+F IR + +F+AKD+A ALGY N+++AIN HCK V+ + + G +
Sbjct: 30 VTPFDFHGFPIRVLDSIHGEPYFIAKDIAEALGYANTSKAINTHCKAVSTCH-TEMGGQV 88
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ V+II E D+YRL++KS LP+A++FE WV +VLP++RKTGSY+V+
Sbjct: 89 RAVQIIPERDLYRLVMKSKLPAAEQFEEWVVGQVLPSIRKTGSYAVQ 135
>gi|312962012|ref|ZP_07776509.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
gi|311283822|gb|EFQ62406.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
Length = 283
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PF+F+ IR I DK + WFVA+DVA ALGY A++ HCK A P K G
Sbjct: 28 SAVIPFDFDGAAIRVITDKLGDPWFVARDVADALGYSKPENAVSRHCK-AATTTP-KQGG 85
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G + II E D+YRL++KS LP+A+KFE WV +VLP++RKTG++S + P
Sbjct: 86 GF--MTIIPERDLYRLVMKSKLPAAEKFEEWVVGQVLPSIRKTGTFSTQGP 134
>gi|309378131|emb|CBX23230.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 282
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ + +RT+ D +WF+A DV LGY N +A+ +CK GV+ RY L
Sbjct: 1 MNAVQVLNFQQSSVRTVADNKGELWFLANDVCEILGYSNPRQAVQKNCKEKGVSNRYTL- 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T GG Q + I+EP++YRL++KS P+A+ FE WV E VLPT+RKTG Y + PK A
Sbjct: 60 TRGGEQSMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPTIRKTGGYQI-TPKTTA 116
>gi|254804765|ref|YP_003082986.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
gi|254668307|emb|CBA05261.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
Length = 282
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N +A+ +CK GV+ RY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYSNPRQAVQKNCKEKGVSNRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GG Q + I+EP++YRL++KS P+A+ FE WV E VLPT+RKTG Y +
Sbjct: 60 TRGGEQSMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPTIRKTGGYQI 110
>gi|154499068|ref|ZP_02037446.1| hypothetical protein BACCAP_03060 [Bacteroides capillosus ATCC
29799]
gi|150271908|gb|EDM99134.1| hypothetical protein BACCAP_03060 [Bacteroides capillosus ATCC
29799]
Length = 309
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 111/218 (50%), Gaps = 31/218 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
++RTI++ ++ + F A DVA ALGY N N+A+N HC+ + KR G +Q + I E
Sbjct: 71 EVRTILEGEK-VLFCAADVAKALGYTNPNKAVNDHCRAITKR-STPISGKVQSINFIPEG 128
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
DVYRL+++S LP+A+KFE WVF+EV+PT+RKTG Y + S + R+ K +
Sbjct: 129 DVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGYMTD---------SLLERIQKEPAVI 179
Query: 133 AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN-------DEYLTITQIGER 185
+ A L+L+ NR V LE I P +D D+ I +
Sbjct: 180 VEFA----QALILEKNR-------VKALECELITAKPKADYYDAFINPDDCTNIRTTAKE 228
Query: 186 LNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L P+R +F+ + LLK SG P K G
Sbjct: 229 LKIPER-KFV-QFLLKEKYLFRSPSGQLLPYNKDSNAG 264
>gi|295101253|emb|CBK98798.1| Prophage antirepressor [Faecalibacterium prausnitzii L2-6]
Length = 333
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 111/218 (50%), Gaps = 31/218 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
++RTI++ ++ + F A DVA ALGY N N+A+N HC+ + KR G +Q + I E
Sbjct: 95 EVRTILEGEK-VLFCAADVAKALGYTNPNKAVNDHCRAITKR-STPISGKVQSINFIPEG 152
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
DVYRL+++S LP+A+KFE WVF+EV+PT+RKTG Y + S + R+ K +
Sbjct: 153 DVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGYMTD---------SLLERIQKEPAVI 203
Query: 133 AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN-------DEYLTITQIGER 185
+ A L+L+ NR V LE I P +D D+ I +
Sbjct: 204 VEFA----QALILEKNR-------VKALECELITAKPKADYYDAFINPDDCTNIRTTAKE 252
Query: 186 LNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L P+R +F+ + LLK SG P K G
Sbjct: 253 LKIPER-KFV-QFLLKEKYLFRSPSGQLLPYNKDSNAG 288
>gi|134287387|ref|YP_001110770.1| putative antirepressor [Clostridium phage phiC2]
gi|93117225|gb|ABE99515.1| putative antirepressor [Clostridium phage phiC2]
Length = 212
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 4/111 (3%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + FE E +IR + + D +FV KD+A +LGY+N+N+AI HCKGV K K
Sbjct: 1 MNNLQIFEKMEFGQIR-MAEIDNKPYFVGKDIAKSLGYKNTNDAILRHCKGVVKHEGFKI 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G K+ +I+E DVYRL+V S LP+A+KFE WVF+EVLPT+R+TG Y +
Sbjct: 60 NG--IKIALITEGDVYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQAQ 108
>gi|116492795|ref|YP_804530.1| phage-encoded protein [Pediococcus pentosaceus ATCC 25745]
gi|116102945|gb|ABJ68088.1| Uncharacterized phage-encoded protein [Pediococcus pentosaceus ATCC
25745]
Length = 267
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 17/249 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F FE N++RT++ D+ +FV KDVATA+GY+N+ +AI H K R + T
Sbjct: 1 MNELQNFNFEGNEVRTVLINDEP-YFVGKDVATAIGYQNTRKAIKDHVKTKYMREERIVT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G Q + +ISEP +Y+L +S LP+A+ F+ W++EEVLP++RK G+Y + A +
Sbjct: 60 PSGTQTMTVISEPGIYQLAGQSKLPTAEPFQDWIYEEVLPSIRKHGAYMTDEKIEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + L+ ++ ++ N L+ R V++L+ + N +T
Sbjct: 120 PDTIISLATQLKNEREKVEVERNGRLIAEQR-------VEELQPKADYYDQILSNKGVVT 172
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
+T I + N A LNKLL + G+Q S+ SG + K ++ G VP H +G
Sbjct: 173 VTSIAK--NYGMTAPELNKLLNRLGVQYSQ-SGSWYLYKKYQKNGYTHTIPVPYSHRDGR 229
Query: 238 TQ---QLKW 243
Q KW
Sbjct: 230 PDIKPQTKW 238
>gi|68250068|ref|YP_249180.1| hypothetical protein NTHI1733 [Haemophilus influenzae 86-028NP]
gi|68058267|gb|AAX88520.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 261
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F+++ +RTI D + IWF DV LGY N+ +A+ HCK G+AKRY + G +
Sbjct: 49 FNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRY-ISYPSGRK 107
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 108 EAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 157
>gi|71899883|ref|ZP_00682031.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730323|gb|EAO32406.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 196
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 197 AGGRQRVNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 256
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ V + + ++K G+K + + I L +I+ LP+ D
Sbjct: 257 TQDRVAALLLIGQFVSKVPGMKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 313
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 314 MLNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDAWELTEAGRVWGEA---IPYSRNG 368
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 369 HSSYQILWNPTVLDSL 384
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR + G +
Sbjct: 9 LQFESHAVRVQLDEHERRWFNANDICTALALLNPRAALAQHVDAENVSKRKTIDAVGWTK 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 69 HANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHII 113
>gi|239998687|ref|ZP_04718611.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|268594538|ref|ZP_06128705.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268547927|gb|EEZ43345.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
Length = 281
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRY-TP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG Y + PK A
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGYQI-TPKTTA 116
>gi|194098248|ref|YP_002001304.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|193933538|gb|ACF29362.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
Length = 281
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRY-TP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG Y + PK A
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGYQI-TPKTTA 116
>gi|254361489|ref|ZP_04977628.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
gi|153093003|gb|EDN74024.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
Length = 225
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F S+ +R I+D +Q WF DV LGY N + + HCK GV+KRY Q
Sbjct: 10 FNFNSSAVRVIIDPNQEPWFCGADVCRILGYVNESLTLQKHCKENGVSKRYLTDKMQRQQ 69
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
K I+EP++YRL++KS P A+KFE WVFEEVLP +RKTG Y+++
Sbjct: 70 KAIFINEPNLYRLIIKSRKPEAEKFEAWVFEEVLPQIRKTGKYALQ 115
>gi|145629495|ref|ZP_01785293.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145638991|ref|ZP_01794599.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae PittII]
gi|144978338|gb|EDJ88102.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145271963|gb|EDK11872.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae PittII]
gi|309750953|gb|ADO80937.1| Putative prophage antirepressor protein [Haemophilus influenzae
R2866]
Length = 213
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F+++ + TI D + IWF DV LGY N+ +A+ HCK G+AKRY + G +
Sbjct: 10 FNFKNSPVHTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRY-ISYPSGRK 68
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 69 EAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 118
>gi|149882791|ref|YP_001294770.1| hypothetical protein MPMin1_gp10 [Microbacterium phage Min1]
gi|148763422|gb|ABR10440.1| hypothetical protein [Microbacterium phage Min1]
Length = 250
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQK 65
F F+ + +R ++ + FVA+DVA+ALGY + AI HC+GVA +P+ G Q
Sbjct: 4 FGFDGHHVRVVLVEGLPR-FVARDVASALGYTDPTSAIKQHCRGVAIHHPITDSLGRTQL 62
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
R+I EPD+ RL+ S LP A++FERW FEEVLPT+ +TGSY+ P L
Sbjct: 63 ARVIGEPDLLRLITGSRLPQAERFERWAFEEVLPTVIRTGSYTAPPPAL 111
>gi|253570718|ref|ZP_04848126.1| bro family antirepressor [Bacteroides sp. 1_1_6]
gi|251839667|gb|EES67750.1| bro family antirepressor [Bacteroides sp. 1_1_6]
Length = 258
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 122/223 (54%), Gaps = 26/223 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQKVR 67
E K+RT V+ +WF A+DVA+ALGY N +A+N HC KGV + L T GG QKV+
Sbjct: 11 EFGKVRT-VEAGGRVWFCARDVASALGYANPKDAVNRHCRPKGVCV-HDLLTAGGRQKVK 68
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
I E ++YRL+ S LPSA++FE W+F+E++P K G Y +E K T A + R +
Sbjct: 69 FIDEGNLYRLMACSRLPSAERFESWIFDELVPRTLKEGGYLLE--KEGETDAELLSRTLQ 126
Query: 128 HLEELAKQ-----AGL-KDNQL-LLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
E K+ +GL K+N L LK++ K+ D ++ H PS+ T+T
Sbjct: 127 LAEAKLKERDRYISGLEKENALNALKLSLQAPKVRYFD-----EVLHSPST-----YTVT 176
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI + L R LN+ L G+Q ++ G + T + ++ G
Sbjct: 177 QIAKELGMSGRE--LNRRLKALGIQF-RLGGTWLLTARYQKEG 216
>gi|14251162|ref|NP_116530.1| hypothetical protein BK5-Tp38 [Lactococcus phage BK5-T]
gi|928839|gb|AAA98590.1| unknown [Lactococcus phage BK5-T]
gi|26005559|emb|CAC80179.1| hypothetical protein [Lactococcus phage BK5-T]
Length = 266
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 22/211 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F F + +RT++ D+ WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MNELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-- 117
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+RK G+Y +A KL
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRKHGAYMTDA-KLEEVLL 118
Query: 118 SASTVLRVHKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ T++ + L+E +QA L +++QL L++ K T +D I +P
Sbjct: 119 NPDTLINLATQLKE-ERQARLGLEKENSQLNLELAAATEKTTYLDL-----ILEIPDD-- 170
Query: 174 DEYLTITQIGER--LNPPQRARFLNKLLLKR 202
+ ITQI + + + R LN+L ++R
Sbjct: 171 ---ILITQIAQDYGFSAVKLNRILNELRIQR 198
>gi|240127893|ref|ZP_04740554.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268686287|ref|ZP_06153149.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626571|gb|EEZ58971.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 283
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVSALAGRKGI 135
>gi|260440833|ref|ZP_05794649.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
gi|291044151|ref|ZP_06569867.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291012614|gb|EFE04603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 283
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVAALAGRKGI 135
>gi|240112608|ref|ZP_04727098.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|268598677|ref|ZP_06132844.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268582808|gb|EEZ47484.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 283
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVSALAGRKGI 135
>gi|299530348|ref|ZP_07043773.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
gi|298721719|gb|EFI62651.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
Length = 255
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 25/259 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENS---------NEAINAHCKGV 51
MS ITPF F+ + + I D D ++ FVA +VA LGY ++ +E N H G
Sbjct: 1 MSNITPFVFDGHNVTVIADDDGSLRFVAMEVADILGYSDAYEMTKRLDDDEKQNRHIAGF 60
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
R V II+E +Y ++ S+ P A+ F++WV EVLP++RKTGSY+ +
Sbjct: 61 GPR----------GVTIITESGLYDAILGSSKPEAKPFQKWVRAEVLPSIRKTGSYTTKV 110
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS- 170
+ + R L +A+ G N + N+ + ++T ++ ++ + HL +
Sbjct: 111 ATTPLKATADAARAFAPLVRVARLLGCDKNAAAISANQAIYQMTSINLMQQLGHTHLEAE 170
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
S ++ T T++G+ + AR N LL + GLQ+ K+ + T G++ ++ D
Sbjct: 171 SQEGQWYTPTELGKVIGAS--ARGTNLLLAEAGLQM-KLGEKWEATDAGKDF-CRLFDTG 226
Query: 231 MQHVEG-STQQLKWNSNLL 248
+H G S Q+KW+ ++
Sbjct: 227 KKHGSGVSVTQMKWSRTVI 245
>gi|240081025|ref|ZP_04725568.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|268597136|ref|ZP_06131303.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268550924|gb|EEZ45943.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 283
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVAALAGRKGI 135
>gi|254493410|ref|ZP_05106581.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|226512450|gb|EEH61795.1| predicted protein [Neisseria gonorrhoeae 1291]
Length = 283
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVAALAGRKGI 135
>gi|300933384|ref|ZP_07148640.1| Bro family antirepressor [Corynebacterium resistens DSM 45100]
Length = 255
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVRIISEP 72
IRT+ +D+ ++F +DV TALGY N+++AI HC+GV RYP+ G Q+ R I+E
Sbjct: 17 IRTVEHEDK-VYFCGRDVVTALGYTNTSKAIQDHCRGVPFRYPIVDALGRTQEARFITEG 75
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
D+YRL+ S LP+AQ FE WV +EVLPT+R+ G Y+++
Sbjct: 76 DLYRLIFSSKLPAAQDFEAWVVDEVLPTIRRHGVYAID 113
>gi|210632120|ref|ZP_03297220.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM 13279]
gi|210159716|gb|EEA90687.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM 13279]
Length = 251
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 2 STITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
S I PF E +RTI ++D + F KDVA ALGY N A+NAHCKG A R
Sbjct: 4 SDIIPFTSEQFGTVRTI-EEDGRVIFCGKDVAAALGYAKPNNALNAHCKGDALIRGITDN 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q+ R I+E D+YRL+ S LPSAQ+FE WVF+EVLP++RK G Y
Sbjct: 63 LGREQQARFITEGDLYRLIASSKLPSAQQFESWVFDEVLPSIRKRGGY 110
>gi|71901327|ref|ZP_00683423.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728911|gb|EAO31046.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 196
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 197 AGGRQRVNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 256
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ + + + ++ G+K + + I L +I+ LP+ D
Sbjct: 257 TQDRIAALLLIGQYISTVPGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 313
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 314 MLNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDAWELTEAGRVWGEA---IPYSRNG 368
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 369 HSSYQILWNPTVLDSL 384
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR
Sbjct: 1 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALALLNPRAALAQHVDAENVSKRKT 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 61 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHII 113
>gi|260579059|ref|ZP_05846958.1| Bro family toxin-antitoxin system, toxin component [Corynebacterium
jeikeium ATCC 43734]
gi|300933482|ref|ZP_07148738.1| Bro family antirepressor [Corynebacterium resistens DSM 45100]
gi|258602810|gb|EEW16088.1| Bro family toxin-antitoxin system, toxin component [Corynebacterium
jeikeium ATCC 43734]
Length = 255
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVRIISEP 72
IRT+ +D+ ++F +DV TALGY N+++AI HC+GV RYP+ G Q+ R I+E
Sbjct: 17 IRTVEHEDK-VYFCGRDVVTALGYTNTSKAIQDHCRGVPFRYPIVDALGRTQEARFITEG 75
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
D+YRL+ S LP+AQ FE WV +EVLPT+R+ G Y+++
Sbjct: 76 DLYRLIFSSKLPAAQDFEAWVVDEVLPTIRRHGVYAID 113
>gi|224541900|ref|ZP_03682439.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
gi|224525134|gb|EEF94239.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
Length = 244
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 117/225 (52%), Gaps = 26/225 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M+ + F FESN +R + ++D WFVAKD A LGY+N +AI+ H K VAK
Sbjct: 1 MNEVQLFNFESNSVRAL-ERDGQAWFVAKDAAKTLGYKNPRDAISKHVDEEDKEVAK--- 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE---APK 113
T GG Q + II+E +Y L++ S LPSA+KF+RWV EVLP LRKTG Y V+ +
Sbjct: 57 CDTLGGRQDIAIINESGLYSLVLSSKLPSAKKFKRWVTSEVLPALRKTGQYQVKELSGQE 116
Query: 114 LRATS---ASTVLRV-HKHLEELAKQAGLKD------NQLLLKVNRGVTKITGVDQLEAM 163
L A + A +VL K +EE+ +A D +L+ + K G+D M
Sbjct: 117 LMAKALIEAQSVLAAKDKQIEEMKPKALFADAVTASHTSILVGELAKILKQNGID----M 172
Query: 164 DIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS 207
K L + ++ I + G N P Q+A L +K G V+
Sbjct: 173 GQKRLFAWLREKGYLIKRQGTDYNMPTQKAMELGLFEIKEGSYVN 217
>gi|240117658|ref|ZP_04731720.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|268603359|ref|ZP_06137526.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268587490|gb|EEZ52166.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
Length = 283
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK A
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPKTTA 116
>gi|319896720|ref|YP_004134913.1| hypothetical protein HIBPF03470 [Haemophilus influenzae F3031]
gi|317432222|emb|CBY80574.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 240
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+ +R I D WF DV LGY NS +A+ HCK GV KRY T+
Sbjct: 49 FSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRY-TPTKS 107
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 108 ADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 160
>gi|319775742|ref|YP_004138230.1| hypothetical protein HICON_10850 [Haemophilus influenzae F3047]
gi|317450333|emb|CBY86549.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 240
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+ +R I D WF DV LGY NS +A+ HCK GV KRY T+
Sbjct: 49 FSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRY-TPTKS 107
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 108 ADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 160
>gi|240123213|ref|ZP_04736169.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|268681838|ref|ZP_06148700.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268622122|gb|EEZ54522.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 283
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK A
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPKTTA 116
>gi|59801452|ref|YP_208164.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|240016839|ref|ZP_04723379.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
gi|240120878|ref|ZP_04733840.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|240125457|ref|ZP_04738343.1| putative phage associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268684051|ref|ZP_06150913.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|59718347|gb|AAW89752.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
gi|268624335|gb|EEZ56735.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 281
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRY-TP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK A
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPKTTA 116
>gi|125624905|ref|YP_001033388.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493713|emb|CAL98701.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071704|gb|ADJ61104.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 252
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F F + +RT++ D+ WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MNELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+RK G+Y +A S
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRKHGAYMTDAKAQDVISG 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+ L +L QAG + QL L+ ++ K D + A
Sbjct: 120 NG-------LADLLLQAGNQIKQLELEKSQMKPKALFADSVSA 155
>gi|240014407|ref|ZP_04721320.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
Length = 278
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRY-TP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK A
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPKTTA 116
>gi|1175791|sp|P44189|Y1418_HAEIN RecName: Full=Uncharacterized protein HI_1418
gi|1574254|gb|AAC23068.1| predicted coding region HI1418 [Haemophilus influenzae Rd KW20]
Length = 201
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY T+
Sbjct: 20 FSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRY-TPTKS 78
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 79 ADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 131
>gi|237745723|ref|ZP_04576203.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377074|gb|EEO27165.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 290
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLL 78
D +WF A DV + LGY NS + I HCK GV KRY + + G ++V I+EP++YRL+
Sbjct: 7 DGEVWFCAADVCSVLGYTNSRKVIADHCKASGVTKRY-ISSGGQNREVIFINEPNLYRLI 65
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
++S P A+KFE WV EEVLP +RKTGSYSV K++ +T++
Sbjct: 66 IRSKKPEAEKFETWVMEEVLPAIRKTGSYSVSINKIQQGELATLI 110
>gi|71276266|ref|ZP_00652544.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900321|ref|ZP_00682456.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162874|gb|EAO12598.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729896|gb|EAO31992.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 408
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 126/256 (49%), Gaps = 13/256 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 157 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 216
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 217 AGGRQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 276
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDE 175
+ + + + ++ G+K + + I L +I+ LP+ D
Sbjct: 277 TQDRIAALLLIGQYISTVPGVKPG---IAAAATLACIKSNTNLTTEEIRRALPALRDPLC 333
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G++L+ A+ N+LL G Q + T G GG+ +P
Sbjct: 334 MLNATQLGKQLH--CSAKAANQLLASSGFQFRNERDAWELTEAG-RVGGEA--IPYSRNG 388
Query: 236 GSTQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 389 HSSYQILWNPTVLDSL 404
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR
Sbjct: 21 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALELLNPCAALAQHVGAENVSKRKT 80
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 81 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHII 133
>gi|30995448|ref|NP_439568.2| hypothetical protein HI1418 [Haemophilus influenzae Rd KW20]
Length = 188
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY T+
Sbjct: 7 FSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRY-TPTKS 65
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 66 ADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 118
>gi|260580749|ref|ZP_05848575.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260092566|gb|EEW76503.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 222
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
+ F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY T+
Sbjct: 7 FSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRY-TPTKS 65
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 66 ADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQL 118
>gi|170730325|ref|YP_001775758.1| hypothetical protein Xfasm12_1177 [Xylella fastidiosa M12]
gi|167965118|gb|ACA12128.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 420
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 15/257 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 169 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 228
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 229 AGGRQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 288
Query: 118 SASTVLRVHKHLEELAKQAGLKDN---QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ + + + ++ G+K L + T +T + A+ P
Sbjct: 289 TQDRIAALLLIGQYISTVPGMKPGIAAAATLACIKSNTNLTTEELRRALPALQEPLC--- 345
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
L TQ+G++L+ A+ N+LL G Q + T G G +P
Sbjct: 346 -LLNATQLGKQLH--CSAKAANQLLASSGFQFRNERDAWELTEAGRMWGEA---IPYSRN 399
Query: 235 EGSTQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 400 GHSSYQILWNPTVLDSL 416
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPLKTEGGIQ 64
+FES+ +R +D+ + WF A D+ AL N A+ H + V+KR + G +
Sbjct: 41 LQFESHAVRVQLDEHERRWFNANDICAALELLNPRAALAQHVGAENVSKRKTIDAVGWTK 100
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 101 HANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHII 145
>gi|317163970|gb|ADV07511.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 108
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRY-TP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTG 106
>gi|206563728|ref|YP_002234491.1| hypothetical protein BCAM1879 [Burkholderia cenocepacia J2315]
gi|198039768|emb|CAR55739.1| hypothetical phage protein [Burkholderia cenocepacia J2315]
Length = 265
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F+ + IRT+ + + +FVA+DVA LGY N +AI HCKGV K + T GG+Q++
Sbjct: 8 FDHDGATIRTLTVEGEP-YFVARDVAEILGYSNYRDAIARHCKGVVK-HDTPTVGGMQEL 65
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
I E DVYRL+++S LP A++FE WV VLP++RK+GSY+V+ + LR+
Sbjct: 66 TYIPERDVYRLVMRSKLPGAERFEEWVVGTVLPSIRKSGSYAVQPAFETPRTLVEALRLA 125
Query: 127 KHLEELAKQAGLK 139
LEE K+A L+
Sbjct: 126 ADLEE--KRAALE 136
>gi|240115355|ref|ZP_04729417.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|268601036|ref|ZP_06135203.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585167|gb|EEZ49843.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 283
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V PK T+
Sbjct: 60 TASDEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQV-GPK---TT 115
Query: 119 ASTVLRVHKHLEELAKQAGL 138
A + + + LA + G+
Sbjct: 116 ADDRTGLRRAVAALAGRKGI 135
>gi|295086054|emb|CBK67577.1| Prophage antirepressor [Bacteroides xylanisolvens XB1A]
Length = 258
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVR 67
E KIRT V+KD IWF AKDVA +LGY N+ +AI+ HCK GV + + T GG QK++
Sbjct: 11 EFGKIRT-VEKDGKIWFCAKDVAASLGYANTRDAIDRHCKQKGVCV-HDIPTRGGRQKIK 68
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E ++YRL+ S LPSA++FE W+F++++P K G Y
Sbjct: 69 FIDEGNMYRLIAGSRLPSAERFESWIFDDLVPRTLKEGGY 108
>gi|265755711|ref|ZP_06090332.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
gi|263234317|gb|EEZ19910.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 258
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVR 67
E KIRT V+KD IWF AKDVA +LGY N+ +AI+ HCK GV + + T GG QK++
Sbjct: 11 EFGKIRT-VEKDGKIWFCAKDVAASLGYANTRDAIDRHCKQKGVCV-HDIPTTGGRQKIK 68
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E ++YRL+ S LPSA++FE W+F++++P K G Y
Sbjct: 69 FIDEGNMYRLIAGSRLPSAERFESWIFDDLVPRTLKEGGY 108
>gi|237717608|ref|ZP_04548089.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229453112|gb|EEO58903.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 257
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ I+ FE E +IRT+ + D IWF A DVA+ALGY N +A+ HCK GV Y
Sbjct: 1 MNKISVFEHPEFGRIRTL-EIDGKIWFCASDVASALGYSNPRDAVARHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLR 115
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y + +
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKDGGYLLGKKGETDN 118
Query: 116 ATSASTVLRVHKHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
A TVL K ++E + ++N +LK+ K+ D++ L S
Sbjct: 119 ELLARTVLLAQKRIKERDSRISALEKENNYAILKLKLQAPKVQYYDKV-------LQSQS 171
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
T TQI + L A LNK L G+Q
Sbjct: 172 T---YTTTQIAKELG--MTAGMLNKRLRWAGIQ 199
>gi|330810751|ref|YP_004355213.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378859|gb|AEA70209.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 283
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+++ PF+F+ IR I D+ + WFVA+DVA ALGY AI+ HCK A P K G
Sbjct: 28 NSVIPFDFDGGAIRVITDELGDPWFVARDVADALGYAKPENAISRHCK-AATTTP-KQGG 85
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G V I E DVYRL+++S L A++FE WV EVLP++RKTG + +P
Sbjct: 86 GFMTV--IPERDVYRLVMRSKLVGAERFEEWVVGEVLPSIRKTGKFDAASP 134
>gi|16801480|ref|NP_471748.1| hypothetical protein lin2418 [Listeria innocua Clip11262]
gi|16414940|emb|CAC97645.1| lin2418 [Listeria innocua Clip11262]
Length = 256
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 85/132 (64%), Gaps = 2/132 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F FE +K+RT++ D+ +FV DVA+ LGY N +A+ HCK A+ +
Sbjct: 1 MTNLKLFNFEGSKVRTVI-LDEEPFFVGIDVASILGYSNPQKAMRDHCKKPAESLVNDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
G ++ ++SE DVYRL+++S LPSA+KFE W+ +EVLP++RK G+Y + +A T
Sbjct: 60 GRPRRTLVLSESDVYRLVLRSDLPSAEKFENWLMDEVLPSIRKHGAYMTDDTIEKAITDP 119
Query: 120 STVLRVHKHLEE 131
++R+ +L+E
Sbjct: 120 DFLIRLATNLKE 131
>gi|298384274|ref|ZP_06993834.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
gi|298262553|gb|EFI05417.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
Length = 256
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ I+ FE E +IRT+ D D IWF A DVA+ALGY N +A+ HCK GVA Y
Sbjct: 1 MNKISIFEHPEFGRIRTL-DIDGKIWFCASDVASALGYANPRDAVARHCKPMGVAI-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T +QK++ I+E +VYRL+ S LP+A+KFE W+F+E++P K G Y
Sbjct: 59 PTRSAVQKIKYINEGNVYRLIAGSKLPAAEKFESWIFDELVPGTLKNGGY 108
>gi|269122504|ref|YP_003310681.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
gi|268616382|gb|ACZ10750.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
Length = 245
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG---GIQKVR 67
++ VD+ +WF A +VA LGY+N ++AI HCK GV R + G QK +
Sbjct: 13 QLEIYVDEKGKVWFPATEVAEMLGYKNPHKAILDHCKEHGVTFREVIANTGFGDSKQKKK 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
I E +V+RL+ KS +P A++FE W+F+E +P + KTG Y ++APK + L K
Sbjct: 73 YIDEGNVFRLITKSHIPGAEEFESWIFDEAIPQIMKTGKYEIKAPKNKILDQEIKL---K 129
Query: 128 HLEELAKQAGLK--DNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGER 185
+ A LK +N L R V ++L DI LPSS+ + T T+IGE+
Sbjct: 130 NSRSRMANAYLKIANNTALPNEYRQVMLTYAANELSGTDILPLPSSEKRTF-TATEIGEK 188
Query: 186 L 186
L
Sbjct: 189 L 189
>gi|118579550|ref|YP_900800.1| BRO domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118502260|gb|ABK98742.1| BRO domain protein [Pelobacter propionicus DSM 2379]
Length = 247
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F FE +RTI +++ WFV KDVA LGY AI CKG K L T GG+Q++
Sbjct: 9 FCFEDAAVRTI-ERNGEPWFVGKDVAEILGYAAPRNAIRDFCKGGIKSM-LPTGGGLQEM 66
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
II E D+YRL+++S LP+A++FE WV EVLP +RKTG Y++
Sbjct: 67 TIIPERDLYRLIMRSKLPAAERFEEWVVAEVLPAIRKTGFYNI 109
>gi|228902050|ref|ZP_04066214.1| hypothetical protein bthur0014_32290 [Bacillus thuringiensis IBL
4222]
gi|228857476|gb|EEN01972.1| hypothetical protein bthur0014_32290 [Bacillus thuringiensis IBL
4222]
Length = 265
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 121/230 (52%), Gaps = 31/230 (13%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRL 77
KD +F A DVA LGY N ++AI HCK GV + + T G Q + I+EP++YRL
Sbjct: 20 KDGKEYFPATDVAKVLGYTNPHKAIRDHCKQEGVNETL-VPTNSGKQMKKFINEPNLYRL 78
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--------VEAPKLRATSASTVLRVHKHL 129
+ KS LP A++FE+WVFEEVLP++RK G+Y ++ P L AS + +
Sbjct: 79 IAKSKLPQAEQFEKWVFEEVLPSIRKHGAYMTPHTINALLQDPDLLIGLASQLKQ----- 133
Query: 130 EELAKQAGLKDNQLLL-KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNP 188
E+ A+Q + N +L +V +KIT +DQ+ L S D +T++QI
Sbjct: 134 EQQARQVAEQKNLMLTQQVAEHASKITYLDQI-------LQSKDT---VTVSQIAADYGL 183
Query: 189 PQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
A LNK+L +Q KV+ + K + +G K + + H +GS
Sbjct: 184 S--AVRLNKILKDEKIQY-KVNNQWLLYAKHQNKGYTKSQTIDVTHSDGS 230
>gi|228937940|ref|ZP_04100567.1| hypothetical protein bthur0008_6160 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970820|ref|ZP_04131460.1| hypothetical protein bthur0003_6070 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977394|ref|ZP_04137789.1| hypothetical protein bthur0002_6090 [Bacillus thuringiensis Bt407]
gi|228782371|gb|EEM30554.1| hypothetical protein bthur0002_6090 [Bacillus thuringiensis Bt407]
gi|228788945|gb|EEM36884.1| hypothetical protein bthur0003_6070 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821731|gb|EEM67732.1| hypothetical protein bthur0008_6160 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938419|gb|AEA14315.1| hypothetical protein CT43_CH0623 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 265
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 121/230 (52%), Gaps = 31/230 (13%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRL 77
KD +F A DVA LGY N ++AI HCK GV + + T G Q + I+EP++YRL
Sbjct: 20 KDGKEYFPATDVAKVLGYTNPHKAIRDHCKQEGVNETL-VPTNSGKQMKKFINEPNLYRL 78
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--------VEAPKLRATSASTVLRVHKHL 129
+ KS LP A++FE+WVFEEVLP++RK G+Y ++ P L AS + +
Sbjct: 79 IAKSKLPQAEQFEKWVFEEVLPSIRKHGAYMTPHTINALLQDPDLLIGLASQLKQ----- 133
Query: 130 EELAKQAGLKDNQLLL-KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNP 188
E+ A+Q + N +L +V +KIT +DQ+ L S D +T++QI
Sbjct: 134 EQQARQVAEQKNLMLTQQVAEHASKITYLDQI-------LQSKDT---VTVSQIAADYGL 183
Query: 189 PQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
A LNK+L +Q KV+ + K + +G K + + H +GS
Sbjct: 184 S--AVRLNKILKDEKIQY-KVNNQWLLYAKHQNKGYTKSQTIDVTHSDGS 230
>gi|291563344|emb|CBL42160.1| Uncharacterized phage-encoded protein [butyrate-producing bacterium
SS3/4]
Length = 252
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E KIRTI ++ + F A D+A +LGY N N+A+N HC+ + K G +Q + I
Sbjct: 11 EFGKIRTIQQGEKTL-FCASDIARSLGYSNPNKAVNDHCRAITK-CSTPISGKMQDINFI 68
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E DVYRL+V S LPSA+KFE WVF+ VLP++RK G Y
Sbjct: 69 PEGDVYRLIVHSKLPSAEKFEHWVFDTVLPSIRKNGGY 106
>gi|256839925|ref|ZP_05545434.1| bro family antirepressor [Parabacteroides sp. D13]
gi|256738855|gb|EEU52180.1| bro family antirepressor [Parabacteroides sp. D13]
Length = 258
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRII 69
K+RTI + + +WF A DVA ALGY N+N+AI HCK G+ Y + T GG QKV+ I
Sbjct: 13 GKVRTI-ENEGKMWFCAADVAQALGYVNTNDAIARHCKTKGIV-FYDIPTAGGRQKVKFI 70
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
E ++YRL+ S LPSA++FE W+F+E++P K G Y +E
Sbjct: 71 DEGNLYRLIAGSRLPSAERFESWIFDELVPRTLKEGGYLLE 111
>gi|23455724|ref|NP_695033.1| antirepressor [Lactococcus phage r1t]
gi|1353522|gb|AAB18680.1| ORF5 [Lactococcus phage r1t]
Length = 265
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 23/211 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M + F F + +RT++ D+ WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MKELQNFNFNNLPVRTVLINDEP-WFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-- 117
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+R T Y +A KL
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRST-EYMTDA-KLEEVLL 117
Query: 118 SASTVLRVHKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ T++ + L+E +QA L +++QL +++ K T +D + L S D+
Sbjct: 118 NPDTLINLATQLKE-ERQARLGLEKENSQLNIELAAATEKTTYLDLI-------LESPDD 169
Query: 174 DEYLTITQIGER--LNPPQRARFLNKLLLKR 202
+ ITQI + + + R LN+L ++R
Sbjct: 170 ---ILITQIAQDYGFSAVKFNRILNELRIQR 197
>gi|319942638|ref|ZP_08016946.1| hypothetical protein HMPREF9464_02165 [Sutterella wadsworthensis
3_1_45B]
gi|319803817|gb|EFW00749.1| hypothetical protein HMPREF9464_02165 [Sutterella wadsworthensis
3_1_45B]
Length = 256
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 31/217 (14%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
I F+FE + +R IV+ + WF A DV ALGY N+ +A+ H K GVAK + T+G
Sbjct: 5 IQTFKFEGSNLRVIVENGEP-WFCAIDVCKALGYSNTRDALRNHTKNKGVAK-HDTPTKG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PKLRAT 117
G+Q + ++E ++YRL+++S L SA++F+ WV EVLPT+RKTGSY P
Sbjct: 63 GVQPLAYLNEGNLYRLIMRSKLESAERFQDWVCGEVLPTIRKTGSYGTRQTPALPDFTNP 122
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + ++ + LA +A +K + + K+ + + A D +H
Sbjct: 123 AIAARAWAEQYEQRLALEAQVKSD---------MPKVEFAEAVTASDAEH---------- 163
Query: 178 TITQIGERLNPPQRARF----LNKLLLKRGLQVSKVS 210
TIT+ + L+ R F + + K+G Q ++S
Sbjct: 164 TITEAAKVLSIRPRKFFDWLRMGGFIYKQGTQAMQIS 200
>gi|296112028|ref|YP_003622410.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
gi|295833560|gb|ADG41441.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
Length = 234
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 8/112 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M+ + F FE+N++RT+V ++ +W VAKDVAT LGY + +A+ AH KGV K
Sbjct: 1 MNEVAVFNFETNEVRTVVINEE-VWLVAKDVATTLGYSRTADAVKAHVDEEDKGVGK--- 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
++T GG Q++ +I++ V L + S LP+A+KF+RWV EV+P++ K GSYS
Sbjct: 57 IQTPGGTQRMTVINQSGVISLALSSKLPTAKKFKRWVTSEVIPSVLKHGSYS 108
>gi|160945875|ref|ZP_02093101.1| hypothetical protein FAEPRAM212_03408 [Faecalibacterium prausnitzii
M21/2]
gi|158443606|gb|EDP20611.1| hypothetical protein FAEPRAM212_03408 [Faecalibacterium prausnitzii
M21/2]
Length = 248
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 22/191 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPL-KTEGGIQKVRIISEPDV 74
+++KD F DV ALGY++S +A+ AHC YPL G Q+ R ISE ++
Sbjct: 17 VIEKDGKYLFCGLDVTAALGYKDSAKALKAHCTSDGWAFYPLIDNVGRTQQTRFISEGNL 76
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR--ATSASTVLRVHKH-LEE 131
YRL+V S LPSA++FERWVF+EVLPT+RK G+Y + KL ATS ++++ L E
Sbjct: 77 YRLIVHSKLPSAERFERWVFDEVLPTIRKHGAY-ITREKLWEVATSPEAMMKLCSDLLAE 135
Query: 132 LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQR 191
K A L++ +L+ + +D+KH S N + + L P+R
Sbjct: 136 REKNAALREENAVLEGKAAFYDLF-------IDLKH---STN-----LRTTAKELAVPER 180
Query: 192 ARFLNKLLLKR 202
RF+ LL +R
Sbjct: 181 -RFIRFLLEQR 190
>gi|304438141|ref|ZP_07398084.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368914|gb|EFM22596.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 288
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 124/252 (49%), Gaps = 29/252 (11%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGY----ENSNEAI-----NAHCKGVAKRYPLKTEG-GI 63
+R + KD N W A+DVA G+ ++ NE + N++ K + T G GI
Sbjct: 10 VRGYIAKDGNAWLNAEDVARGWGFTQIAKSGNEVVRWERVNSYLKEFGF---IPTSGDGI 66
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLRATSA 119
+ + E VYRL K+ AQ F+ + +EVLP +RKTGSY+V + PK R
Sbjct: 67 KPGDFLPENMVYRLGFKANNERAQLFQAKLADEVLPAIRKTGSYTVPKLEKNPKYRTRMV 126
Query: 120 STVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL--PSSDNDEY 176
T +R +H EL K G+K L K + + GVD E +K L P+ +
Sbjct: 127 GTAVRDIHSTAAELQKLFGVKSGIALAKATSMIERAYGVDMEE---VKELIPPAEHETGF 183
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQIG RL AR N LL GLQV + +G +R T KG+ G +M P +
Sbjct: 184 LNATQIGARLGV--NARKANALLQNAGLQV-RFNGMWRLTNKGKCYGEEM---PYERNGH 237
Query: 237 STQQLKWNSNLL 248
S Q++WN +++
Sbjct: 238 SGYQIRWNDSVV 249
>gi|222112392|ref|YP_002554656.1| prophage antirepressor [Acidovorax ebreus TPSY]
gi|221731836|gb|ACM34656.1| prophage antirepressor [Acidovorax ebreus TPSY]
Length = 252
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 13/249 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
MS I PF+FE++ +R VD WF A DV AL N ++AI H ++ T
Sbjct: 1 MSAIIPFQFEAHAVRVQVDDQGQPWFNATDVCDALEMGNPSQAIKTHVDAEDLQKLETLT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q+ ++E +Y L++ ST +A++F+RWV EVLP +RKTG Y+V L A
Sbjct: 61 AGGRQRQNHVNESGLYALILGSTKDAAKRFKRWVTSEVLPAIRKTGGYTVPG-ALATLPA 119
Query: 120 STVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-E 175
T RV L E +AK G+K + + TG+ E + + LPS++
Sbjct: 120 PTHDRVSAILLIGEAVAKVPGVKPGIAAAATLTCIQENTGITT-EVLR-RALPSANEPIC 177
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G+ LN + A+ N++L G Q + T GE G +P
Sbjct: 178 ALNATQLGKLLN--RSAKATNQMLAAGGFQFRNERDEWELTEAGE---GWAEAMPYSRNG 232
Query: 236 GSTQQLKWN 244
S Q+ WN
Sbjct: 233 HSGYQILWN 241
>gi|237714170|ref|ZP_04544651.1| bro family antirepressor [Bacteroides sp. D1]
gi|262408452|ref|ZP_06084999.1| bro family antirepressor [Bacteroides sp. 2_1_22]
gi|293368921|ref|ZP_06615522.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CMC 3f]
gi|294644479|ref|ZP_06722239.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CC 2a]
gi|294808551|ref|ZP_06767297.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
xylanisolvens SD CC 1b]
gi|229445662|gb|EEO51453.1| bro family antirepressor [Bacteroides sp. D1]
gi|262354004|gb|EEZ03097.1| bro family antirepressor [Bacteroides sp. 2_1_22]
gi|292635941|gb|EFF54432.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CMC 3f]
gi|292640170|gb|EFF58428.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CC 2a]
gi|294444232|gb|EFG12953.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
xylanisolvens SD CC 1b]
Length = 257
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ ++ FE E +IRT+ + D IWF A DVA ALGY N +A+ HCK GV Y
Sbjct: 1 MNKVSIFEHPEFGRIRTL-EIDGKIWFCASDVAAALGYSNPRDAVVRHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKNGGY 108
>gi|148380344|ref|YP_001254885.1| BRO family protein [Clostridium botulinum A str. ATCC 3502]
gi|148289828|emb|CAL83936.1| BRO family protein [Clostridium botulinum A str. ATCC 3502]
Length = 266
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
+VD+++ WF A D+AT LGY N +AI HCK G R L T+GG Q + I E ++
Sbjct: 18 LVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRSVL-TKGGKQNKKFIDEGNL 76
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+ S LPSA+KFE W+F+E+LPT+RKTG Y
Sbjct: 77 YRLITHSELPSAEKFEIWIFDEILPTIRKTGGY 109
>gi|196042528|ref|ZP_03109769.1| antirepressor, phage associated [Bacillus cereus NVH0597-99]
gi|196026685|gb|EDX65351.1| antirepressor, phage associated [Bacillus cereus NVH0597-99]
Length = 257
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
I+ KD +F A VA LGY N+ EAI HCK GVA + + T G+Q + I+EP++
Sbjct: 17 ILMKDGKEYFPATYVANLLGYANATEAIKRHCKNEGVA-FHEVPTTSGVQNKKFINEPNL 75
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+VKS LP A+ FE+WVFEEVLP++RK G+Y
Sbjct: 76 YRLIVKSKLPQAEHFEKWVFEEVLPSIRKHGAY 108
>gi|229188001|ref|ZP_04315096.1| Antirepressor, phage associated [Bacillus cereus BGSC 6E1]
gi|228595481|gb|EEK53206.1| Antirepressor, phage associated [Bacillus cereus BGSC 6E1]
Length = 262
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 3/93 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
I+ K+ +F A DVA ALGY N ++AI HCK GV + + T GIQ + I+EP++
Sbjct: 23 ILIKEGKEFFPATDVAKALGYSNPHKAIKDHCKPEGVNESL-VPTNSGIQTKKFINEPNL 81
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+VKS LP A++FE+WVFEEVLP++RK G+Y
Sbjct: 82 YRLIVKSKLPQAEQFEKWVFEEVLPSIRKHGAY 114
>gi|261208361|ref|ZP_05923011.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|260077422|gb|EEW65141.1| anti-repressor protein [Enterococcus faecium TC 6]
Length = 251
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 112/214 (52%), Gaps = 28/214 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RTI+ D+ +FV KDVA LGY N +AI H K
Sbjct: 4 MNTPQIFNFEQNEVRTILVNDEP-YFVGKDVADVLGYSNPQKAIRDHVDLEDKTQNDSFT 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V +I+E +Y L++KS LPSA+KF+RWV EVLPT+RKTGSYS P+ S +
Sbjct: 63 VNGTAVVLINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKTGSYS-NVPQ----SFA 117
Query: 121 TVLRVHKHLEELAKQAGLKDNQLL-LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE NQLL ++ KI+ +D + L S+D +
Sbjct: 118 QALRLAADLEE--------KNQLLEQQIAEYEPKISYLDTI-------LSSTDT---VAT 159
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+QI A LNKLL + G+Q KVSG +
Sbjct: 160 SQIAADYG--MSAIALNKLLNELGVQ-HKVSGQW 190
>gi|237718973|ref|ZP_04549454.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229451751|gb|EEO57542.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 257
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ + FE E +IRT+ + D IWF A DVA ALGY N +A+ HCK GV Y
Sbjct: 1 MNKVLIFEHPEFGRIRTL-EIDGKIWFCASDVAAALGYSNPRDAVVRHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKNGGY 108
>gi|289566846|ref|ZP_06447256.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|294616694|ref|ZP_06696464.1| phage anti-repressor protein [Enterococcus faecium E1636]
gi|289161377|gb|EFD09267.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|291590448|gb|EFF22187.1| phage anti-repressor protein [Enterococcus faecium E1636]
Length = 248
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 112/214 (52%), Gaps = 28/214 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RTI+ D+ +FV KDVA LGY N +AI H K
Sbjct: 1 MNTPQIFNFEQNEVRTILVNDEP-YFVGKDVADVLGYSNPQKAIRDHVDLEDKTQNDSFT 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V +I+E +Y L++KS LPSA+KF+RWV EVLPT+RKTGSYS P+ S +
Sbjct: 60 VNGTAVVLINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKTGSYS-NVPQ----SFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLL-LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE NQLL ++ KI+ +D + L S+D +
Sbjct: 115 QALRLAADLEE--------KNQLLEQQIAEYEPKISYLDTI-------LSSTDT---VAT 156
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+QI A LNKLL + G+Q KVSG +
Sbjct: 157 SQIAADYG--MSAIALNKLLNELGVQ-HKVSGQW 187
>gi|196037168|ref|ZP_03104483.1| antirepressor, phage associated [Bacillus cereus W]
gi|195990272|gb|EDX54325.1| antirepressor, phage associated [Bacillus cereus W]
Length = 256
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
I+ KD +F A DVA ALGY N ++AI HCK GV + + T G Q+ + I+E ++
Sbjct: 17 ILIKDGKEYFPATDVAKALGYSNPHKAIKDHCKSEGVNETI-VPTNSGKQRKKFINESNL 75
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
YRL+VKS LP A++FE+WVFEEVLPT+RK G+Y E
Sbjct: 76 YRLIVKSKLPQAEQFEKWVFEEVLPTIRKHGAYMTE 111
>gi|53803190|ref|YP_115046.1| hypothetical protein MCA2642 [Methylococcus capsulatus str. Bath]
gi|53756951|gb|AAU91242.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 252
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 13/249 (5%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MST + PF+FE +R + D WFVA DVA +L Y +++ + ++T
Sbjct: 1 MSTELIPFDFEGRPVRVVTDAQGEPWFVAADVAQSLEYRMASDMTRSLDDDEKGTQIVRT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q++ +I+E +Y ++KS P A++F+RWV EVLP +RKTG+Y+ A L A
Sbjct: 61 PSGNQEMLVINESGLYSAILKSRKPEAKRFKRWVTHEVLPAIRKTGAYAAGA-TLPALPV 119
Query: 120 STVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-E 175
T RV L E +AK G+K + + + TG+ +E + + LP+++
Sbjct: 120 PTQDRVSSILLIGEAVAKVPGVKAGIAMAATLTCIQENTGL-AVETLR-RALPAANAPIC 177
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G+ +N + A+ N+LL GLQ + T GE M P
Sbjct: 178 SLNATQLGKLIN--RSAKATNQLLAATGLQFRNKRDEWELTEAGEAWAEAM---PYSRNG 232
Query: 236 GSTQQLKWN 244
S Q+ WN
Sbjct: 233 HSGYQILWN 241
>gi|314950087|ref|ZP_07853373.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
gi|313643528|gb|EFS08108.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
Length = 261
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 23/209 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D+ +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 4 MNTPQIFNFEQNEVRTILVNDEP-YFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
G +++ II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y + E + +
Sbjct: 63 SGQSREMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + L Q K+ KI+ +D + L S+D+ +T
Sbjct: 123 PDTIIQLATQLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---VT 168
Query: 179 ITQIGER--LNPPQRARFLNKLLLKRGLQ 205
I+QI ++P Q +NKLL K G+Q
Sbjct: 169 ISQIAADYGMSPQQ----MNKLLHKLGIQ 193
>gi|295089924|emb|CBK76031.1| Prophage antirepressor [Clostridium cf. saccharolyticum K10]
Length = 248
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 116/228 (50%), Gaps = 23/228 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS I F E +++++ F D A ALGY+++ + AHC GVA +
Sbjct: 1 MSQIEVFNNEEFGSIRVIEENGKYLFCGLDAAKALGYKDTVNDLKAHCSKDGVAFYHLTD 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL--RA 116
G QKV+ ISE ++YRL+V S LPSA++FERWVF+EVLP++RK G+Y V KL A
Sbjct: 61 NLGRKQKVKFISEGNLYRLIVYSKLPSAERFERWVFDEVLPSIRKHGAY-VTKEKLWKVA 119
Query: 117 TSASTVLRVHKH-LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS +L++ L E + A L++ LL+ +K D +D+ H S N
Sbjct: 120 TSPEALLKLCSDLLAEREENAALREENALLE-----SKAAFYDLF--IDLNH---STN-- 167
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + L P+R RF+ + LL++ SG P K G
Sbjct: 168 ---LRTTAKELVVPER-RFV-RFLLEQRFVYRTASGNVLPYAKPSNDG 210
>gi|257879465|ref|ZP_05659118.1| BRO [Enterococcus faecium 1,230,933]
gi|257881736|ref|ZP_05661389.1| BRO [Enterococcus faecium 1,231,502]
gi|257890224|ref|ZP_05669877.1| BRO [Enterococcus faecium 1,231,410]
gi|260558840|ref|ZP_05831029.1| anti-repressor protein [Enterococcus faecium C68]
gi|293560440|ref|ZP_06676932.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|293570339|ref|ZP_06681398.1| phage anti-repressor protein [Enterococcus faecium E980]
gi|294621638|ref|ZP_06700803.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|257813693|gb|EEV42451.1| BRO [Enterococcus faecium 1,230,933]
gi|257817394|gb|EEV44722.1| BRO [Enterococcus faecium 1,231,502]
gi|257826584|gb|EEV53210.1| BRO [Enterococcus faecium 1,231,410]
gi|260075299|gb|EEW63612.1| anti-repressor protein [Enterococcus faecium C68]
gi|291598803|gb|EFF29855.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|291605588|gb|EFF35030.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|291609585|gb|EFF38848.1| phage anti-repressor protein [Enterococcus faecium E980]
Length = 258
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 23/209 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D+ +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 1 MNTPQIFNFEQNEVRTILVNDEP-YFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
G +++ II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y + E + +
Sbjct: 60 SGQSREMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + L Q K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATQLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGER--LNPPQRARFLNKLLLKRGLQ 205
I+QI ++P Q +NKLL K G+Q
Sbjct: 166 ISQIAADYGMSPQQ----MNKLLHKLGIQ 190
>gi|293366199|ref|ZP_06612884.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319665|gb|EFE60026.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 238
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 10/121 (8%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRY 55
MS + F FE +RT+ VDK+ + FV KDVA LGY+ + +AI H KGV K
Sbjct: 1 MSELQTFNFEELPVRTLTVDKEPH--FVGKDVARILGYKRTADAIRDHVELEDKGVGK-- 56
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
++T GG+Q V II+E +Y L+ S L SA++F+RWV EVLPTLRKTG+Y + ++
Sbjct: 57 -IQTPGGMQNVTIINESGLYSLIFSSKLESAKRFKRWVTSEVLPTLRKTGTYQIPNDPMQ 115
Query: 116 A 116
A
Sbjct: 116 A 116
>gi|229002959|ref|ZP_04160826.1| Antirepressor, phage associated [Bacillus mycoides Rock3-17]
gi|228758310|gb|EEM07490.1| Antirepressor, phage associated [Bacillus mycoides Rock3-17]
Length = 263
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F ++ I+ KD +F A VA LGY N+ EAI HCK GVA + +
Sbjct: 7 MNQLQNFSHDAFGKLEILMKDGKEYFPATYVANLLGYANATEAIKRHCKTEGVA-FHEVP 65
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T G+Q + I+EP++YRL+VKS L A++FE+WVFEEVLP++RK G+Y
Sbjct: 66 TTSGVQNKKFINEPNLYRLIVKSKLTQAEQFEKWVFEEVLPSIRKHGAY 114
>gi|260555806|ref|ZP_05828026.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
gi|260410717|gb|EEX04015.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
Length = 184
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------- 47
M+ IT F+F+S +R ++D +Q WF DV AL S++ +
Sbjct: 1 MNAITHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDISRSSDLLQIQRGDVKNETPKRNG 60
Query: 48 ---CKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
KGVA Y T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKT
Sbjct: 61 ALDSKGVAD-YHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKT 119
Query: 105 GSYSV 109
GSYS
Sbjct: 120 GSYSA 124
>gi|71898940|ref|ZP_00681107.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731352|gb|EAO33416.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WF+A DVA ALGY ++ A + H KG + + T
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFIATDVAVALGYRDAANAARHVGLHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q++ I+SE +YRL+++S P A F WV +EVLP++RKTGSYS + +
Sbjct: 60 IKGNQELTIVSEGGLYRLVLRSRKPEAVAFSDWVTDEVLPSIRKTGSYSTTGTMVNDDAL 119
Query: 120 STVLRVHKHLEEL 132
+ + H ++L
Sbjct: 120 CAIWFLCDHFKKL 132
>gi|307580159|gb|ADN64128.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 188
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WFVA DVA ALGY ++ A + AH KG + + T
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFVATDVAVALGYRDAANAARHVGAHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+SE +YRL+++S A F WV +EVLP++RKTGSYS P
Sbjct: 60 IKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGSYSASHP 112
>gi|28199008|ref|NP_779322.1| hypothetical protein PD1116 [Xylella fastidiosa Temecula1]
gi|182681723|ref|YP_001829883.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057106|gb|AAO28971.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631833|gb|ACB92609.1| prophage antirepressor [Xylella fastidiosa M23]
Length = 188
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WFVA DVA ALGY ++ A + AH KG + + T
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFVATDVAVALGYRDAANAARHVGAHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+SE +YRL+++S A F WV +EVLP++RKTGSYS P
Sbjct: 60 IKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGSYSASHP 112
>gi|125974244|ref|YP_001038154.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125714469|gb|ABN52961.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 254
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
+F A D A LGY + +AIN H KG K L T GG Q+++ I E D+YRL+VKS LP
Sbjct: 25 YFPATDCARILGYSDPYDAINRHTKGSVKHRVL-TSGGEQEIKFIPEGDLYRLIVKSKLP 83
Query: 85 SAQKFERWVFEEVLPTLRKTGSYSVE 110
A++FERWVF+EVLP++RK G Y+ +
Sbjct: 84 KAERFERWVFDEVLPSIRKHGIYATD 109
>gi|169796904|ref|YP_001714697.1| hypothetical protein ABAYE2900 [Acinetobacter baumannii AYE]
gi|213156693|ref|YP_002318354.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|294840370|ref|ZP_06785053.1| gp54 protein [Acinetobacter sp. 6014059]
gi|301346240|ref|ZP_07226981.1| gp54 protein [Acinetobacter baumannii AB056]
gi|301513005|ref|ZP_07238242.1| gp54 protein [Acinetobacter baumannii AB058]
gi|301597472|ref|ZP_07242480.1| gp54 protein [Acinetobacter baumannii AB059]
gi|169149831|emb|CAM87722.1| hypothetical protein from bacteriophage [Acinetobacter baumannii
AYE]
gi|213055853|gb|ACJ40755.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|323517038|gb|ADX91419.1| hypothetical protein ABTW07_0983 [Acinetobacter baumannii
TCDC-AB0715]
Length = 184
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------- 47
M+ +T F+F+S +R ++D +Q WF DV AL S++ +
Sbjct: 1 MNAVTHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDISRSSDLLQIQRGDVKNETPKRNG 60
Query: 48 ---CKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
KGVA Y T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKT
Sbjct: 61 ALDSKGVAD-YHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKT 119
Query: 105 GSYSV 109
GSYS
Sbjct: 120 GSYSA 124
>gi|283797212|ref|ZP_06346365.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
gi|291075174|gb|EFE12538.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
Length = 248
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 26/220 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQKV 66
E IR +++++ F D+ATALGY A+N+HC+ KR +P E I +
Sbjct: 11 EFGSIR-VIEENGKYLFCGLDIATALGYAKPRNAVNSHCRYALKRGVPHPQNPECSID-M 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL--RATSASTVLR 124
I E DVYRL+ S LPSA++FERWVF+EVLPT+RK G+Y + KL ATS +++
Sbjct: 69 TFIPEGDVYRLITHSKLPSAERFERWVFDEVLPTIRKHGAY-ITREKLWEVATSPEAMIK 127
Query: 125 VHKH-LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
+ L E K A L++ +L+ + +D+KH S N +
Sbjct: 128 LCSDLLAEREKNAALREENAMLEGKAAFYDLF-------IDLKH---STN-----LRTTA 172
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L P+R RF+ + LL++ SG P K G
Sbjct: 173 KELVVPER-RFI-RFLLEQRFVYRAPSGNVLPYAKPANDG 210
>gi|155042960|ref|YP_001425627.1| Phage associated-antirepressor [Bacillus virus 1]
gi|115529864|gb|ABJ09643.1| associated-antirepressor [Bacillus virus 1]
Length = 244
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ I F E ++ ++ I+F A DVA LGY N ++AI HCK GV R
Sbjct: 1 MTEIRAFNHEMFGELQVLVENGEIYFPATDVAIILGYTNPHKAIKDHCKEKGVTIR-SAP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GG Q+ + I+E ++YRL+ +S LP A+KFE WVF+EVLPT+RKTG Y
Sbjct: 60 TAGGEQQKKFITEGNLYRLIARSKLPEAEKFESWVFDEVLPTIRKTGGY 108
>gi|71901481|ref|ZP_00683568.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728737|gb|EAO30881.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 188
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WFVA DVA ALGY ++ A + AH KG + + T
Sbjct: 4 SIIPFDFHSHSVR-VVMRDGNPWFVATDVAVALGYRDAANAARHVGAHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+SE +YRL+++S A F WV +EVLP++RKTG YS P
Sbjct: 60 IKGNQSLTIVSEGGLYRLVLRSRRTEAVAFSDWVTDEVLPSIRKTGGYSASHP 112
>gi|319646356|ref|ZP_08000586.1| prophage antirepressor [Bacillus sp. BT1B_CT2]
gi|317392106|gb|EFV72903.1| prophage antirepressor [Bacillus sp. BT1B_CT2]
Length = 257
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
IV + ++F A + AT LGY N ++AI+ HCK GVA L + GG Q+ + I+E ++
Sbjct: 17 IVYIENKVYFGATESATTLGYVNPHDAISKHCKKEGVAFHEVL-SNGGPQRKKFINEGNL 75
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+ +S LPSA+KFE WVF+EV+PT+RKTG Y
Sbjct: 76 YRLISRSKLPSAEKFESWVFDEVIPTIRKTGGY 108
>gi|41179298|ref|NP_958516.1| putative antirepressor [Lactobacillus prophage Lj928]
gi|42519327|ref|NP_965257.1| Lj928 prophage antirepressor [Lactobacillus johnsonii NCC 533]
gi|38731427|gb|AAR27357.1| putative antirepressor [Lactobacillus prophage Lj928]
gi|41583615|gb|AAS09223.1| Lj928 prophage antirepressor [Lactobacillus johnsonii NCC 533]
Length = 253
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F FE+ ++RT+ D+ +FV KDVAT LGY+N + IN H K RY + T G ++
Sbjct: 8 FNFENQQVRTLT-VDEEPYFVGKDVATILGYKNGSRDINTHVDEEDKLRYQISTAGQMRD 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+I+E +Y L++ S LP+A+KF+RWV EVLP +RK G+Y + A V+R
Sbjct: 67 QILINESGLYSLILSSKLPNAKKFKRWVTSEVLPAIRKHGAYMTDEK------AFDVVRN 120
Query: 126 HKHLEELAKQAG 137
L +L +QA
Sbjct: 121 KTGLADLLQQAA 132
>gi|118445202|ref|YP_891171.1| antirepressor, phage associated [Bacillus thuringiensis str. Al
Hakam]
gi|118419763|gb|ABK88181.1| antirepressor, phage associated [Bacillus thuringiensis str. Al
Hakam]
Length = 262
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDV 74
I+ K+ +F A DVA LGY N ++AI HCK GV + + T G+Q + I+EP++
Sbjct: 23 ILIKEGKEFFPATDVAKVLGYSNPHKAIKDHCKPEGVNETL-VPTNSGVQTKKFINEPNL 81
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+VKS LP A++FE WVFEEVLP++RK G+Y
Sbjct: 82 YRLIVKSKLPQAEQFETWVFEEVLPSIRKHGAY 114
>gi|273810441|ref|YP_003344912.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097816|gb|ACV41122.1| Bro-N family protein [Xylella phage Xfas53]
Length = 188
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WFVA DVA ALGY ++ A + AH KG + + T
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFVATDVAVALGYRDAANAARHVGAHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+SE +YRL+++S A F WV +EVLP++RKTG YS P
Sbjct: 60 IKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGGYSASHP 112
>gi|255103227|ref|ZP_05332204.1| prophage antirepressor [Clostridium difficile QCD-63q42]
Length = 347
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ--KVRIIS 70
+IRTI +++ +FVA D+A ALGY+++ AI HCK V K + + + +V II
Sbjct: 22 EIRTIRIENEP-YFVATDIAKALGYKDTTNAIKQHCKWVVKHHIPHPQSKTKTLEVNIIP 80
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E D+YRL+ S LPSA+KFERWVF+EVLP++R+ G+Y
Sbjct: 81 EGDMYRLITNSELPSAEKFERWVFDEVLPSIREHGAY 117
>gi|190573874|ref|YP_001971719.1| putative phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011796|emb|CAQ45416.1| putative phage-related protein [Stenotrophomonas maltophilia K279a]
Length = 253
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 14/250 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG--VAKRYPLK 58
MS I PF+FE++ +R VD WF A DV AL N ++AI +H G + K +
Sbjct: 1 MSAIIPFQFEAHAVRIQVDGAGLPWFNASDVCNALEMGNPSQAIKSHVDGDDLQKLEVID 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G Q+ ++E +Y L++ ST +A++F+RW+ EVLP +RKTGSY+ + L A
Sbjct: 61 NLGRTQRANHVNESGLYALILGSTKDAAKRFKRWLTSEVLPAIRKTGSYAAPS-ALAALP 119
Query: 119 ASTVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND- 174
A T RV L E +AK G+K + + TG+ E + + LPS++
Sbjct: 120 APTHDRVSAILLIGEAVAKVPGVKPGIAAAATLTCIQENTGI-TTEVLR-RALPSANEPI 177
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
L TQ+G+ LN + A+ N++L G Q + T GE M P
Sbjct: 178 CALNATQLGKLLN--RSAKATNQMLAAGGFQFRNDRDEWELTEAGEAWAEAM---PYSRN 232
Query: 235 EGSTQQLKWN 244
S Q+ WN
Sbjct: 233 GHSGYQILWN 242
>gi|255652582|ref|ZP_05399484.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 347
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ--KVRIIS 70
+IRTI +++ +FVA D+A ALGY+++ AI HCK V K + + + +V II
Sbjct: 22 EIRTIRIENEP-YFVATDIAKALGYKDTTNAIKQHCKWVVKHHIPHPQSKTKTLEVNIIP 80
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E D+YRL+ S LPSA+KFERWVF+EVLP++R+ G+Y
Sbjct: 81 EGDMYRLITNSELPSAEKFERWVFDEVLPSIREHGAY 117
>gi|218290598|ref|ZP_03494700.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
gi|218239382|gb|EED06579.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
Length = 256
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M T+ PFE+E ++R +V D W+VAKDV LG N + A+ + KG++ +
Sbjct: 4 MDTLLPFEYEGKQVRVVV-VDGEPWWVAKDVCDVLGIGNPSMALSRLDDDEKGLSS---I 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+T GG+Q+V +++EP +Y L++ S P A+ F+RW+ +VLPTLRKTG Y E P ++T
Sbjct: 60 ETPGGVQQVAVVNEPGLYTLILGSRKPEAKAFKRWITHDVLPTLRKTGRY--EMPDRKST 117
Query: 118 SASTVLRVHKHLEELAKQAGL 138
+ R + + QA L
Sbjct: 118 EDEEMKRERLAVMRMNAQARL 138
>gi|167034436|ref|YP_001669667.1| prophage antirepressor [Pseudomonas putida GB-1]
gi|166860924|gb|ABY99331.1| prophage antirepressor [Pseudomonas putida GB-1]
Length = 285
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-----GVAKRYPL 57
T+ F FE +R ++ D WF A+DVA LGY N +A+ HCK GV + L
Sbjct: 25 TVNLFNFEGFDVRVVL-VDGEPWFSARDVAEGLGYSNPQKAVRDHCKSPRPVGVNDSFTL 83
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
I I E DVYRL+++S +P A++FE WV EVLP++RKTG Y+ A
Sbjct: 84 GPSANI-----IPERDVYRLVMRSKMPQAERFEEWVVSEVLPSIRKTGGYTAPA 132
>gi|291531549|emb|CBK97134.1| Prophage antirepressor [Eubacterium siraeum 70/3]
Length = 254
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIIS 70
+IRTI D++ + F D+A ALGY N+ +A+ HCK GV + G Q + I+
Sbjct: 14 EIRTI-DENGTVLFCGSDMAKALGYSNTKDALARHCKEDGVVFHDLIDNMGREQHAKFIN 72
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
E +VYRL+ S LP+A++FE WVF+EVLPT+R+ G+Y +
Sbjct: 73 EGNVYRLITHSKLPAAEQFESWVFDEVLPTIRRNGAYMTD 112
>gi|300935454|ref|ZP_07150449.1| BRO family protein [Escherichia coli MS 21-1]
gi|300459336|gb|EFK22829.1| BRO family protein [Escherichia coli MS 21-1]
Length = 186
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------R 54
M+ + F F+ +++T++ D+ FVA DVA ALGY +A+ HC + K R
Sbjct: 1 MNKVVKFSFDDKQVQTVIYADKPA-FVAMDVARALGYTTPQDAVKKHCNSLIKIKCREMR 59
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ L E Q V +I EPDV+RL++ S L SA++F+ WVFEEVLP++R+ G Y E PK
Sbjct: 60 H-LGFEPIPQGVTLIHEPDVFRLIMHSKLESAERFQDWVFEEVLPSIRRNGYYG-EKPKT 117
Query: 115 RATSASTV 122
A+ V
Sbjct: 118 PDDMAAHV 125
>gi|160939356|ref|ZP_02086706.1| hypothetical protein CLOBOL_04249 [Clostridium bolteae ATCC
BAA-613]
gi|158437566|gb|EDP15328.1| hypothetical protein CLOBOL_04249 [Clostridium bolteae ATCC
BAA-613]
Length = 248
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVR 67
E IR IV+++ F DVA +LGY+++ A+ HC+ GVA + G QK +
Sbjct: 11 EFGSIR-IVEENGKYLFCGADVAKSLGYKDTVNALKTHCREDGVAFYHLTDNLGREQKAK 69
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
ISE ++YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y
Sbjct: 70 FISEGNLYRLIVHSKLPSAERFEQWVFDEVLPTIRKHGAY 109
>gi|154500129|ref|ZP_02038167.1| hypothetical protein BACCAP_03789 [Bacteroides capillosus ATCC
29799]
gi|150271085|gb|EDM98354.1| hypothetical protein BACCAP_03789 [Bacteroides capillosus ATCC
29799]
Length = 248
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI- 68
E IR I + D+ + F DVA +LGY N +AI HC+ V KR + +K+ +
Sbjct: 11 EFGSIRVIEENDKYL-FCGLDVANSLGYSNPRDAIIRHCRCVVKRDAPHPQSPDRKISMT 69
Query: 69 -ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATSASTVLRVH 126
I E DVYRL+V S LPSA++FERWVF++VLP +RK G+Y ATS +L++
Sbjct: 70 FIPEGDVYRLIVHSKLPSAERFERWVFDQVLPIIRKHGAYMTREKLWEVATSPEALLKLC 129
Query: 127 KH-LEELAKQAGLKDNQLLLK 146
L E K L++ +L+
Sbjct: 130 SDLLAEREKNTALREENAMLE 150
>gi|58040895|ref|YP_192859.1| Phage-related DNA binding protein [Gluconobacter oxydans 621H]
gi|58003309|gb|AAW62203.1| Phage-related DNA binding protein [Gluconobacter oxydans 621H]
Length = 240
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ IT F FE + + ++D + F A VA ALGY ++++A+ HCK AK YP++
Sbjct: 1 MTEITLFRFEDFDVVAALLDGEPQ--FAASQVAAALGYADTDQAVRKHCKA-AKTYPVEM 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G ++ V++I E DVYRL+++S P+A+ FE V E+LP++RKTG Y AP +
Sbjct: 58 TGQVRNVKMIPERDVYRLILRSKKPTAEAFEEKVVGEILPSIRKTGGYKA-APAI 111
>gi|71899744|ref|ZP_00681895.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730439|gb|EAO32519.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+I PF+F S+ +R +V +D N WF A DVA ALGY ++ A + AH KG + + T
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFAATDVAVALGYRDAANAARHVGAHQKGT---HIVST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q + I+SE +YRL+++S A F WV +EVLP +RKTGSY+ + +
Sbjct: 60 IKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPLIRKTGSYTATGTMVNDDAL 119
Query: 120 STVLRVHKHLEEL 132
+ + H ++L
Sbjct: 120 CAIWFLCDHFKKL 132
>gi|255103042|ref|ZP_05332019.1| prophage antirepressor [Clostridium difficile QCD-63q42]
Length = 108
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ--KVRIIS 70
+IRT V+ D ++FVA D+A LGY+++ AI HCK V K + + + +V +I
Sbjct: 15 EIRT-VEIDGKLYFVATDIARCLGYKDTTNAIKQHCKWVVKHHIPHPQSKTKTLEVNVIP 73
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
D+YRL+ S LPSA+KFERWVF+EVLP++RKTG
Sbjct: 74 AGDMYRLITNSELPSAEKFERWVFDEVLPSIRKTG 108
>gi|326559977|gb|EGE10374.1| BRO family protein [Moraxella catarrhalis 7169]
gi|326569705|gb|EGE19757.1| BRO family protein [Moraxella catarrhalis BC1]
Length = 294
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 14/173 (8%)
Query: 2 STITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLK 58
+ I+ F FES K +RT + +IWF DVA L +NS + + KGV K Y
Sbjct: 3 TQISIFNFESTKQVRTAIRDGGDIWFCLPDVAGILAIKNSRDIVAKQLDKKGVEKIYT-P 61
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q++ I+EP++YR++ +S A KF+ WVF+EVLPT+RKTG Y ++ S
Sbjct: 62 TVGGQQELTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGRYVAKS----TVS 117
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
T LR + + L + GL VN + G ++ +D+ LP +
Sbjct: 118 DRTPLR--QAVSMLVSRCGLDYGTAYTMVN----QYMGTQHIDEIDLADLPRA 164
>gi|325264650|ref|ZP_08131380.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. D5]
gi|291548605|emb|CBL24867.1| Prophage antirepressor [Ruminococcus torques L2-14]
gi|295099486|emb|CBK88575.1| Prophage antirepressor [Eubacterium cylindroides T2-87]
gi|324030312|gb|EGB91597.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. D5]
Length = 248
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI- 68
E IR +++++ F DVA ALGY NS +AI HC+ V KR + +K+ +
Sbjct: 11 EFGSIR-VIEENGKYLFCGTDVAAALGYSNSRDAIIRHCRYVVKRDAPHPQSPDRKISMT 69
Query: 69 -ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y
Sbjct: 70 FIPEGDLYRLIVHSKLPSAEQFEQWVFDEVLPTIRKHGAY 109
>gi|302388049|ref|YP_003823871.1| prophage antirepressor [Clostridium saccharolyticum WM1]
gi|302198677|gb|ADL06248.1| prophage antirepressor [Clostridium saccharolyticum WM1]
Length = 276
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 27/133 (20%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVR-------------IIS 70
+F A DVA ALGY N A+ HCKG PL K EG +QKV I+
Sbjct: 45 FFCASDVAKALGYVNPYAAVKRHCKG-----PLTKREGVVQKVNQYGDAGEQVVEIAFIT 99
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--------VEAPKLRATSASTV 122
E DVYRL+V S LPSA++FE WVF+EVLP++RK G Y ++ P++ T A +
Sbjct: 100 EGDVYRLIVHSKLPSAERFEHWVFDEVLPSIRKHGVYMSDSILDQVIQHPEVIYTLAQEL 159
Query: 123 LRVHKHLEELAKQ 135
+ + LE + KQ
Sbjct: 160 VAEREQLEGIRKQ 172
>gi|227543461|ref|ZP_03973510.1| prophage antirepressor [Lactobacillus reuteri CF48-3A]
gi|300910130|ref|ZP_07127590.1| phage antirepressor protein [Lactobacillus reuteri SD2112]
gi|227186549|gb|EEI66620.1| prophage antirepressor [Lactobacillus reuteri CF48-3A]
gi|300892778|gb|EFK86138.1| phage antirepressor protein [Lactobacillus reuteri SD2112]
Length = 255
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGG 62
F F ++RT+ D+ +FV KDVAT LGY N+ +A++ H KGVAK L T GG
Sbjct: 5 FNFNGQQVRTVTINDEP-YFVGKDVATILGYSNTRDALSHHVDDEDKGVAK---LDTLGG 60
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAST 121
Q II+E +Y L++ S LP+A++F+ WV EVLP++RK G+Y +A S T
Sbjct: 61 RQNQTIINESGLYSLILGSKLPTAKEFKHWVTSEVLPSIRKHGAYMTPQTIEKALLSPDT 120
Query: 122 VLRVHKHLEELAKQ 135
++ + L+E +Q
Sbjct: 121 IINLATQLKEEQEQ 134
>gi|154502963|ref|ZP_02040023.1| hypothetical protein RUMGNA_00784 [Ruminococcus gnavus ATCC 29149]
gi|153796502|gb|EDN78922.1| hypothetical protein RUMGNA_00784 [Ruminococcus gnavus ATCC 29149]
Length = 248
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI- 68
E IR +++++ F DVA ALGY N +AI HC+ V KR + +K+ +
Sbjct: 11 EFGSIR-VIEENGKYLFCGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHPQSPDRKISMT 69
Query: 69 -ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y
Sbjct: 70 FIPEGDLYRLIVHSKLPSAEQFERWVFDEVLPTIRKHGAY 109
>gi|307693704|ref|ZP_07635941.1| prophage antirepressor [Ruminococcaceae bacterium D16]
Length = 248
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV--R 67
E IR +++++ F DVA ALGY N +AI HC+ V KR + +K+
Sbjct: 11 EFGSIR-VIEENGKYLFCGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHPQSPDRKICMT 69
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y
Sbjct: 70 FIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAY 109
>gi|317487090|ref|ZP_07945897.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316921662|gb|EFV42941.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 272
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--RY---PLKTEGGIQ 64
E K+R +++ + WFVA DVA ALGYE +A+N HCK K +Y P + +
Sbjct: 11 EFGKVR-VMEYNGAPWFVASDVAKALGYERPADAVNIHCKKANKITQYCDSPDRVKTPPI 69
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ II E DVYRL+++S LP A++F+ WV EEVLP +RKTG Y
Sbjct: 70 NLNIIPESDVYRLVMRSNLPGAERFQDWVVEEVLPAIRKTGGYG 113
>gi|261366370|ref|ZP_05979253.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571627|gb|EFB77162.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 248
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI- 68
E IR +++++ F DVA ALGY N +AI HC+ V KR + +K+ +
Sbjct: 11 EFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHPQSPDRKISMT 69
Query: 69 -ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y
Sbjct: 70 FIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAY 109
>gi|325674674|ref|ZP_08154361.1| phage antirepressor protein [Rhodococcus equi ATCC 33707]
gi|325554260|gb|EGD23935.1| phage antirepressor protein [Rhodococcus equi ATCC 33707]
Length = 257
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + PF++E+ ++R ++D D WFV D+ LG + + +GV++ + L+T G
Sbjct: 6 AQLVPFQYENERVR-VLDIDGEPWFVLTDLCRVLGLGTPSRVRDRLAEGVSQTHTLQTAG 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA---PKLRATS 118
G Q++ ++SEP +Y ++++S P A +F RW+ EVLPT+R+TG+Y A P+L A +
Sbjct: 65 GPQQMILVSEPGMYEVVIRSDKPEAARFRRWITSEVLPTIRRTGAYGTPALTGPELMARA 124
Query: 119 ---ASTVLRVHKH-LEELAKQAGLKD 140
A VL + ELA +A D
Sbjct: 125 LVEAKQVLAAKDATIAELAPKAAYVD 150
>gi|266623878|ref|ZP_06116813.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
gi|288864310|gb|EFC96608.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
Length = 248
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI- 68
E IR +++++ F DVA ALGY N +AI HC+ V KR + +K+ +
Sbjct: 11 EFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHPQSPDRKISMT 69
Query: 69 -ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y
Sbjct: 70 FIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAY 109
>gi|228994920|ref|ZP_04154698.1| Antirepressor, phage associated [Bacillus pseudomycoides DSM 12442]
gi|228764822|gb|EEM13598.1| Antirepressor, phage associated [Bacillus pseudomycoides DSM 12442]
Length = 247
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVRIISEPDVY 75
I+ KD +F A DVA ALGY N ++AI HCK L T G Q+ + I+E ++Y
Sbjct: 7 ILIKDGKEYFPATDVAKALGYSNPHKAIKDHCKSEGVNETLVPTNSGRQRKKFINESNLY 66
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
RL+VKS LP A +FE+WV EEVLPT+RK G Y
Sbjct: 67 RLIVKSKLPQADQFEKWVIEEVLPTIRKHGVY 98
>gi|317487261|ref|ZP_07946056.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921451|gb|EFV42742.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 325
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKRYPLKTEGG 62
F K+RT+ + N+WFVAKDVA LG+ + AI HC PL T
Sbjct: 81 FPVTRQKVRTVW-HEGNVWFVAKDVAECLGFTHPQSAIIDHCNHAKVLKGGETPLLTSSP 139
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ + II E DVYRL+++S LP+A++F+ WV EEVLP++RKTG Y P
Sbjct: 140 -RGINIIPESDVYRLVMRSKLPAAEQFQTWVCEEVLPSIRKTGGYGRVVP 188
>gi|300853540|ref|YP_003778524.1| putative prophage antirepressor [Clostridium ljungdahlii DSM 13528]
gi|300433655|gb|ADK13422.1| putative prophage antirepressor [Clostridium ljungdahlii DSM 13528]
Length = 257
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
MS I F+ E +RTI +++ I F D+A++LGY N +AI HC+ GV R +
Sbjct: 1 MSEIQIFKNPEFGTVRTI-EENGKIIFCGTDIASSLGYTNPQKAIKDHCREDGVTFRSVI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q+ + I E ++YRL+ S LP+A +FE WVF+EVLPT+RK G+Y
Sbjct: 60 DNIGRTQQAKFIDEGNLYRLITHSKLPAADRFEGWVFDEVLPTIRKHGAY 109
>gi|317487300|ref|ZP_07946095.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921490|gb|EFV42781.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 269
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK----VRIISE 71
+V+ WFVA DVA ALGY N EA HCK V K P K+ +++ + II E
Sbjct: 18 VVEHKGEPWFVASDVAKALGYANPQEATREHCKKVNKITQPSKSLTSVKRPPTFINIIPE 77
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
DVYRL+++S LP A +F+ WV EEV+PT+RK+G Y P
Sbjct: 78 SDVYRLVMRSNLPGAVEFQDWVCEEVIPTIRKSGGYLATKP 118
>gi|254518972|ref|ZP_05131028.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226912721|gb|EEH97922.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 216
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
I++ D +F A A+ LGY N+ A+N HCK K Y + T GG Q V I E D++R
Sbjct: 24 ILELDGKDYFQAVQCASMLGYSNARAALNRHCKHSIK-YKIATIGGNQDVSFIPEGDLFR 82
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L+V S LP A+KFE WVF+E+LP++R G Y+ +
Sbjct: 83 LIVHSKLPYAEKFESWVFDEILPSIRSKGIYATD 116
>gi|225374560|ref|ZP_03751781.1| hypothetical protein ROSEINA2194_00175 [Roseburia inulinivorans DSM
16841]
gi|257438076|ref|ZP_05613831.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
gi|225213620|gb|EEG95974.1| hypothetical protein ROSEINA2194_00175 [Roseburia inulinivorans DSM
16841]
gi|257199407|gb|EEU97691.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
Length = 276
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 27/133 (20%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVR-------------IIS 70
+F A DVA ALGY N A+ HC+G PL K EG +QKV I+
Sbjct: 45 FFCASDVAKALGYVNPYAAVKRHCRG-----PLTKREGVVQKVNQYGDAGEQVVEISFIT 99
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--------VEAPKLRATSASTV 122
E DVYRL+V S LPSA++FE WVF+EVLP++RK G Y ++ P++ T A +
Sbjct: 100 EGDVYRLIVHSKLPSAERFEHWVFDEVLPSIRKHGVYMSDSILDQVIQHPEVIYTLAQEL 159
Query: 123 LRVHKHLEELAKQ 135
+ + LE + KQ
Sbjct: 160 VAEREQLEGIRKQ 172
>gi|326574475|gb|EGE24417.1| BRO family protein [Moraxella catarrhalis 101P30B1]
Length = 292
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 13/171 (7%)
Query: 1 MSTITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK 58
MS I+ F FES K +RT + +IWF DVA L N+N + N GV K Y +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMY-IS 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y ++ S
Sbjct: 60 YESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGRYVAKS----TVS 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
T LR + + L + GL VN+ + ++ +D+ LP
Sbjct: 116 DRTPLR--QAVSMLVSRCGLDYGTAYTMVNQYME----TQHIDEIDLADLP 160
>gi|298694368|gb|ADI97590.1| prophage, antirepressor, putative [Staphylococcus aureus subsp.
aureus ED133]
gi|298695205|gb|ADI98427.1| Phage antirepressor protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 237
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ + D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRTL-EVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y V + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQVPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
I ++ N QR+ + +V K++G
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 195
>gi|294102125|ref|YP_003553983.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
gi|293617105|gb|ADE57259.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
Length = 257
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + FEFE+ +R +D+ N W+VA+DV LGY N+ +A+N H + + R +
Sbjct: 1 MKGLQIFEFENQDVRVRIDEAGNPWWVARDVCDVLGYSNARDAVNNHVR-IKHRDAVAIP 59
Query: 61 GGI---QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ Q +ISEP +Y L+++S LPSA +F+ WV EEVLP +RK +Y
Sbjct: 60 DAMGRNQLTSVISEPGLYSLVLRSKLPSAVRFQDWVTEEVLPAIRKHSAY 109
>gi|257885097|ref|ZP_05664750.1| BRO [Enterococcus faecium 1,231,501]
gi|257820949|gb|EEV48083.1| BRO [Enterococcus faecium 1,231,501]
Length = 258
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 23/209 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D+ +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 1 MNTPQIFSFEQNEVRTILVNDEP-YFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
G +++ II+E +Y L++KS L +A+KF+RWV EVLP +RK G Y + E + +
Sbjct: 60 SGQSREMTIINESGLYSLILKSKLSNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + L Q K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATKLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGER--LNPPQRARFLNKLLLKRGLQ 205
I+Q+ ++P Q +NKLL K G+Q
Sbjct: 166 ISQVAADYGMSPQQ----MNKLLHKLGIQ 190
>gi|258419948|ref|ZP_05682907.1| phage associated antirepressor [Staphylococcus aureus A9719]
gi|295407535|ref|ZP_06817329.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|297246961|ref|ZP_06930727.1| conserved hypothetical protein [Staphylococcus aureus A8796]
gi|257844073|gb|EEV68463.1| phage associated antirepressor [Staphylococcus aureus A9719]
gi|294967644|gb|EFG43679.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|297176205|gb|EFH35505.1| conserved hypothetical protein [Staphylococcus aureus A8796]
Length = 237
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ + D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRTL-EVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y V + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQVPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
I ++ N QR+ + +V K++G
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 195
>gi|296113177|ref|YP_003627115.1| BRO family protein [Moraxella catarrhalis RH4]
gi|295920871|gb|ADG61222.1| BRO family protein [Moraxella catarrhalis RH4]
Length = 263
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 1 MSTITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK 58
MS I+ F FES K +RT + +IWF DVA L N+N + N GV K Y +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMY-IS 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y
Sbjct: 60 YESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGQY 108
>gi|184157378|ref|YP_001845717.1| prophage antirepressor [Acinetobacter baumannii ACICU]
gi|183208972|gb|ACC56370.1| Prophage antirepressor [Acinetobacter baumannii ACICU]
Length = 250
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
MS I+ F F N+IRT++ D IWFVA DVAT L Y ++ I + KGV+ + L
Sbjct: 1 MSNISVFNFNQNEIRTVLKDDGEIWFVASDVATVLEYSVASAMIRHLDEDEKGVSIVHTL 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q+V IISE +Y +KS P A++F++W+ +VLP++RK G Y
Sbjct: 61 ---GGEQEVSIISESGLYSATLKSRKPEAKQFKKWITSDVLPSIRKNGGY 107
>gi|303229286|ref|ZP_07316081.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
atypica ACS-134-V-Col7a]
gi|302516059|gb|EFL58006.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
atypica ACS-134-V-Col7a]
Length = 256
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI-ISEPDVY 75
I++KD +WFVAKDVA LGY+N + +N H + + +G K I I+E +Y
Sbjct: 17 ILEKDNELWFVAKDVADTLGYQNGSRDVNRHTDEEDRTKTMVFDGNQNKETILINESGLY 76
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
L++ S LP+A++F+RWV EV+P +RKTG+YS+ PK
Sbjct: 77 SLVLSSKLPTAKQFKRWVTSEVIPQIRKTGAYSMNIPK 114
>gi|257899103|ref|ZP_05678756.1| BRO [Enterococcus faecium Com15]
gi|257837015|gb|EEV62089.1| BRO [Enterococcus faecium Com15]
Length = 260
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 25/211 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT++ ++ +FV KDVA LGY +S+ A++ + + L +
Sbjct: 1 MNTPQIFNFEQNEVRTVLVNNEP-YFVGKDVAEILGYSDSSSAVSKNVDNEDRTTLLLEQ 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRA 116
G K II+E +Y L++KS LPSA+KF+RWV EVLPT+RK G Y + E +
Sbjct: 60 AGSNYKSKTTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKHGGYLTPEKVEEAL 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ T++++ L+E + L Q K+ KI+ +D + L S+D+
Sbjct: 120 LNPDTIIQLATQLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS--- 165
Query: 177 LTITQIGER--LNPPQRARFLNKLLLKRGLQ 205
+TI+QI ++P Q +NKLL K G+Q
Sbjct: 166 VTISQIAADYGMSPQQ----MNKLLHKLGIQ 192
>gi|170730310|ref|YP_001775743.1| hypothetical protein Xfasm12_1161 [Xylella fastidiosa M12]
gi|167965103|gb|ACA12113.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 193
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKTEG 61
+I PF+F S+ +R ++ +D N WFVA DV TALGY N ++AI H + L
Sbjct: 4 SIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGYRNPSKAIADHLDDDERSNEQLDRSR 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
K IISE +Y L+++S P A+KF +WV EV+P++RKTG YS
Sbjct: 63 MGSKAVIISESGLYALILRSRKPEARKFAKWVTSEVMPSIRKTGGYS 109
>gi|284024170|ref|ZP_06378568.1| hypothetical protein Saura13_06244 [Staphylococcus aureus subsp.
aureus 132]
Length = 237
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 23/215 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ + D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRTL-EVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y + + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQIPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
I ++ N QR+ + +V K++G
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 195
>gi|294795001|ref|ZP_06760136.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
gi|294454363|gb|EFG22737.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
Length = 256
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI-ISEPDVY 75
I++KD +WFVAKDVA LGY+N + +N H + + +G K I I+E +Y
Sbjct: 17 ILEKDNELWFVAKDVADTLGYQNGSRDVNRHTDEEDRTKTMVFDGNQNKETILINESGLY 76
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
L++ S LP+A++F+RW+ EV+P +RKTG+YS+ PK
Sbjct: 77 SLVLSSKLPTAKQFKRWITSEVIPQIRKTGAYSMNIPK 114
>gi|9107709|gb|AAF85304.1|AE004058_5 hypothetical protein XF_2506 [Xylella fastidiosa 9a5c]
Length = 460
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+I PF+F S+ +R +V +D N WFVA DV TALGY N ++A+ H K G
Sbjct: 192 SIIPFDFHSHAVR-VVMRDGNPWFVATDVCTALGYRNPSKAVADHLDDDEKSNQSLGLAG 250
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ V IISE +Y L+++S P A+KF +WV EVLP++RKT Y+V
Sbjct: 251 -KPVIIISESGLYALVLRSRKPEARKFSKWVTSEVLPSIRKTCEYTVH 297
>gi|326562741|gb|EGE13040.1| BRO family protein [Moraxella catarrhalis 103P14B1]
Length = 150
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 1 MSTITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK 58
MS I+ F FES K +RT + +IWF DVA L N+N + N GV K Y +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMY-IS 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y
Sbjct: 60 YESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGRY 108
>gi|169633393|ref|YP_001707129.1| hypothetical protein ABSDF1750 [Acinetobacter baumannii SDF]
gi|169152185|emb|CAP01089.1| hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 260
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--K 58
MS ++ F F N+IRTIV D IWF+A DVAT LGY N+ + + A + L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFIAADVATVLGYRNAPDMVRNLDVDEADTHNLRIR 60
Query: 59 TEGGI---QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+E G+ ++V II+E +Y +KS P A++F++WV +VLP++RK G Y
Sbjct: 61 SENGVLQDRQVSIINESGLYSATLKSRKPEAKQFKKWVTSDVLPSIRKNGGY 112
>gi|77747607|ref|NP_299784.2| hypothetical protein XF2506 [Xylella fastidiosa 9a5c]
Length = 272
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+I PF+F S+ +R ++ +D N WFVA DV TALGY N ++A+ H K G
Sbjct: 4 SIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGYRNPSKAVADHLDDDEKSNQSLGLAG 62
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ V IISE +Y L+++S P A+KF +WV EVLP++RKT Y+V
Sbjct: 63 -KPVIIISESGLYALVLRSRKPEARKFSKWVTSEVLPSIRKTCEYTVH 109
>gi|255020306|ref|ZP_05292374.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
gi|254970226|gb|EET27720.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
Length = 257
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 120/263 (45%), Gaps = 36/263 (13%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---------AHCKG 50
MST + PF+FE +R + D WFVA DV L N+ A+ +G
Sbjct: 1 MSTELIPFDFEGRPVRVVTDAQGEPWFVAADVCAVLELPNTTRALARLDPDEQALISIQG 60
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+++ G +V +++EP +Y L++ S A++F+RWV EVLP +RKTGSY+
Sbjct: 61 ISR--------GNDQVNVVNEPGLYSLVLGSRKREAKRFKRWVTHEVLPAIRKTGSYT-- 110
Query: 111 APKLRAT-SASTVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
AP R T A T RV L E +AK G+K + + + TG+ +E + +
Sbjct: 111 APSARPTLPAPTQDRVAALLLIGEAVAKVPGVKPGIAMAATLTCIQENTGL-AVETLR-R 168
Query: 167 HLPSSDNDE-----YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEE 221
LP+ D L TQ+G L A+ +N+ L GLQ+ + T GE
Sbjct: 169 ALPARDTAANEAICSLNATQLGRLLG--LSAKAINQRLAHHGLQLRNERDEWELTEAGEA 226
Query: 222 RGGKMCDVPMQHVEGSTQQLKWN 244
M P S Q+ WN
Sbjct: 227 WAEAM---PYSRNGHSGYQILWN 246
>gi|71899743|ref|ZP_00681894.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730438|gb|EAO32518.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 203
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 10/111 (9%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-ENSNEA-----INAHCKGVAKRYP 56
+I PF+F S+ +R +V +D N WFVAKDV AL Y E SN A I + KGV P
Sbjct: 4 SIIPFDFHSHVVR-VVMRDGNPWFVAKDVMDALDYAETSNPARVTEHIPSEWKGVN---P 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ T GG QK+ ++EP +Y L +S P A F++W+ EVLP++RKTGSY
Sbjct: 60 IHTLGGEQKLLCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGSY 110
>gi|157325452|ref|YP_001468876.1| gp36 [Listeria phage A006]
gi|66733457|gb|AAY53271.1| gp36 [Listeria phage A006]
Length = 257
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 9/136 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ +++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEP-HFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y +A
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYMTNDTIEKA 116
Query: 117 -TSASTVLRVHKHLEE 131
T ++R+ +L+E
Sbjct: 117 ITDPDFLIRLATNLKE 132
>gi|300765043|ref|ZP_07075031.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL N1-017]
gi|300514343|gb|EFK41402.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL N1-017]
Length = 154
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 9/141 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ +++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEP-HFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y +A
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYMTNDTIEKA 116
Query: 117 -TSASTVLRVHKHLEELAKQA 136
T ++R+ +L+E +A
Sbjct: 117 ITDHDFLIRLATNLKEEKTKA 137
>gi|309776219|ref|ZP_07671210.1| toxin-antitoxin system, toxin component, Bro family
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916170|gb|EFP61919.1| toxin-antitoxin system, toxin component, Bro family
[Erysipelotrichaceae bacterium 3_1_53]
Length = 248
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQKV 66
E IR +++++ F DVA ALGY N +AI HC+ V KR +P + I +
Sbjct: 11 EFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHPQSLDRKIS-M 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I E D+YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y
Sbjct: 69 TFIPEGDLYRLIVHSKLPSAERFEQWVFDEVLPTIRKHGAY 109
>gi|292491104|ref|YP_003526543.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579699|gb|ADE14156.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 316
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI------------NAHC 48
M+ + PF F+ + IR ++ D WFVAKD+ L N +EA+ N
Sbjct: 1 MNDLIPFNFDGHDIRVVM-IDGEPWFVAKDLCDVLEIGNPSEAMKRLDDDEKMTLSNTEG 59
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ + GG Q +++E VY L+ S P A++F RWV E+LPTLRKTG Y+
Sbjct: 60 QKINTESHSGKRGGAQFFNVVNESGVYNLIFASRKPEARRFRRWVTSELLPTLRKTGHYA 119
Query: 109 V-----EAPKLRATSASTVL---RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ P++ A A ++ RV + + + AGL L + N V + TG+D L
Sbjct: 120 MLGAEPSGPRVPAHEADKLVAADRVFRAMLRAGRAAGLPTPTALKRANLEVVRQTGIDIL 179
Query: 161 E 161
E
Sbjct: 180 E 180
>gi|108763205|ref|YP_630118.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
gi|108467085|gb|ABF92270.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
Length = 270
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 19/260 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ F+FES+ +R + D WFVAKD+A +L Y +++ + + ++T+
Sbjct: 1 MNQPVAFDFESHHVRVVTDAHGEHWFVAKDIAESLEYRMASDLTRVLATDEVRTHDVRTD 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQK------FERWVFEEVLPTLRKTGSYSVE-APK 113
G +++ IISEP +YR + + S +K F RWV VLP++RKTGSY+ AP
Sbjct: 61 AGTREMSIISEPGLYRAIFAAKPHSHEKAEKVERFRRWVTHTVLPSIRKTGSYTAPGAPS 120
Query: 114 LRATSASTVLRVHKHLEELAKQA----GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ + ++V HLE A GLK + + TG+ +E K LP
Sbjct: 121 PQPRPSPLQVQVLAHLEVARTLASFVPGLKPELAAACALDAIHRDTGL-TMEPHR-KGLP 178
Query: 170 -SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
+++ L TQ+G++L AR +N L GLQ + T G E
Sbjct: 179 AAAEPPARLNATQLGQKLG--LSARKMNLRLAACGLQGRNEREEWELTDAGREYAEA--- 233
Query: 229 VPMQHVEGSTQQLKWNSNLL 248
VP + QL W +L
Sbjct: 234 VPFSRNGHAAYQLLWRPEVL 253
>gi|16799158|ref|NP_469426.1| hypothetical protein lin0080 [Listeria innocua Clip11262]
gi|224503549|ref|ZP_03671856.1| hypothetical protein LmonFR_13752 [Listeria monocytogenes FSL
R2-561]
gi|16412500|emb|CAC95313.1| lin0080 [Listeria innocua Clip11262]
gi|313633540|gb|EFS00348.1| toxin-antitoxin system, toxin component, Bro family [Listeria
seeligeri FSL N1-067]
Length = 257
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 8/111 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ +++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIENEP-HFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAY 107
>gi|297528606|ref|YP_003669881.1| prophage antirepressor [Geobacillus sp. C56-T3]
gi|297251858|gb|ADI25304.1| prophage antirepressor [Geobacillus sp. C56-T3]
Length = 251
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 9/99 (9%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
V+ + N V DVA ALGY +EAI++HCKG A Y + T GG Q V++I E D+YR
Sbjct: 17 FVEINNNPHAVGNDVAKALGYSRPHEAISSHCKG-AVTYRILTNGGEQTVKVIPEGDIYR 75
Query: 77 LLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSY 107
L++K+ S A++FE+W+FE VLPT+R+TG Y
Sbjct: 76 LIIKAADQSKNPEIRQKAEEFEKWIFEVVLPTIRRTGGY 114
>gi|312134841|ref|YP_004002179.1| prophage antirepressor [Caldicellulosiruptor owensensis OL]
gi|311774892|gb|ADQ04379.1| prophage antirepressor [Caldicellulosiruptor owensensis OL]
Length = 246
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQKVRI 68
E +IR I+ KD WFV KD+A L Y+ ++AI H + + +YP+ T GGIQ+ I
Sbjct: 11 EFGEIRIIM-KDNEPWFVGKDIAEILKYKEPHKAIVRHVEEEDRMKYPIPTNGGIQESWI 69
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+E +Y L++ S LP A+KF++WV EVLP +RKTG Y
Sbjct: 70 INESGLYSLILSSELPEAKKFKKWVTSEVLPAIRKTGGY 108
>gi|329737799|gb|EGG74035.1| BRO family, N-terminal domain protein [Staphylococcus epidermidis
VCU028]
Length = 238
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-PLKT 59
M + F FE +RT+ ++ +FV KDVA LGY N+ +A+ H G K L T
Sbjct: 1 MQDLQIFNFEELPVRTLT-VNEEPFFVGKDVAEILGYSNTRDALYRHVDGEDKDVVKLDT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
GG Q II+E +Y L+ S L SA++F+RWV EVLPTLRKTG+Y + ++A
Sbjct: 60 LGGKQSQTIINESGLYSLIFSSKLESAKRFKRWVTSEVLPTLRKTGTYQIPNDPMQA 116
>gi|282850924|ref|ZP_06260298.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
gasseri 224-1]
gi|282557876|gb|EFB63464.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
gasseri 224-1]
Length = 241
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F+FE ++RT+ + + WFV KD+ LGY+N + IN+H K RY + T G +++
Sbjct: 8 FKFEGKEVRTL-EVNGTPWFVGKDLTNILGYKNGSRDINSHVDEEDKLRYQISTAGQMRE 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRATSASTVLR 124
+++E ++ L++ S LPSA+KF+ WV EVLP +RKTGSY + + P+ R A +
Sbjct: 67 QILVNESGMFSLILSSQLPSAKKFKHWVTSEVLPAIRKTGSYQLPQTPEERLKLA---ME 123
Query: 125 VHKHLEE 131
HL+E
Sbjct: 124 ATIHLDE 130
>gi|261366474|ref|ZP_05979357.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571744|gb|EFB77279.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 247
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 27/220 (12%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQK 65
E IR V+ D W V KDVA ALGY+N EAI H KGV++ + T GGIQK
Sbjct: 11 EFGAIRA-VEIDGEPWLVGKDVALALGYKNPQEAIRNHVDAEDKGVSE---ILTPGGIQK 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATSASTVLR 124
+ II+E +Y L++ S LP A++F RWV EVLP++R+ G+Y + E ATS +L+
Sbjct: 67 LPIINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRQHGAYLTREKLWEVATSPEALLK 126
Query: 125 VHKH-LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
+ L E K A L+ + L+ K D +D++H S N +
Sbjct: 127 LCSDLLAEREKNAALQADNARLQ-----GKAVYYDLF--IDLRH---STN-----LRTTA 171
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L P+R RF+ + LL+R SG P K G
Sbjct: 172 KELEVPER-RFV-RFLLERRYVYRAPSGCVLPYAKSANEG 209
>gi|220920614|ref|YP_002495915.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
gi|219945220|gb|ACL55612.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
Length = 295
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPL 57
M+ + F+FES +R+ ++D +WFVA DV ALG NS A+ A KGV+ Y
Sbjct: 1 MNALQTFDFESQAVRSF-ERDGQVWFVAADVCRALGLTNSRMALQALDDDEKGVSSIY-- 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVK---STLPSA--QKFERWVFEEVLPTLRKTGSYSVEAP 112
T GG Q++ IISEP +Y ++++ +T P + +F +WV EVLP LRKTG YS+ A
Sbjct: 58 -TPGGRQEMAIISEPGLYTIILRCREATKPGSLPHRFRKWVTGEVLPALRKTGRYSMRAG 116
Query: 113 KLRATS 118
+ A++
Sbjct: 117 EGEAST 122
>gi|302876386|ref|YP_003845019.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579243|gb|ADL53255.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 253
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQK 65
E ++RT+V ++ WF+ KDVA LGY N +A+N H KGVA T GG Q
Sbjct: 11 EFGQVRTVVINNEP-WFIGKDVAEKLGYSNGRDALNKHVDEDDKGVAN---CDTPGGKQD 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLR 124
+ II+E +Y L++ S LP+A+KF++WV EVLP++RK G Y +A TS +++
Sbjct: 67 LVIINESGLYSLILGSKLPNAKKFKKWVTSEVLPSIRKHGVYMTNDTIEKAITSPDFLIQ 126
Query: 125 VHKHLEELAKQAGLKDNQL 143
+ +L+E ++ L +++L
Sbjct: 127 LATNLKEEQQKRKLAEDKL 145
>gi|229004103|ref|ZP_04161904.1| BRO [Bacillus mycoides Rock1-4]
gi|228756964|gb|EEM06208.1| BRO [Bacillus mycoides Rock1-4]
Length = 272
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 17/127 (13%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQKVRIISEPDV 74
+++ D WF A + A L Y N +A+ HC +G+ R L TEGG Q+ + I+E ++
Sbjct: 125 VLEIDGKPWFPAIECAEILIYTNPRKAMRDHCLSEGITNRSVL-TEGGNQEKKYINEDNL 183
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAK 134
YRL++KS LPSAQ FERWVF+EVL +LR+ Y VE S + + KH
Sbjct: 184 YRLIIKSKLPSAQSFERWVFDEVLLSLRQNKGYVVE--------TSEIEFIEKHF----- 230
Query: 135 QAGLKDN 141
GL DN
Sbjct: 231 -TGLSDN 236
>gi|313123987|ref|YP_004034246.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280550|gb|ADQ61269.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 259
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKTEGG 62
+ F FES+ +R +++ D WFV KDVA LGY N +A+ H R + T G
Sbjct: 5 VQTFNFESSPVR-VIEIDNEPWFVGKDVAKVLGYSNPQKALRDHVDEEDSRGERIVTPSG 63
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
IQ ++I+E +Y L++ S LP+A+KF+RWV VLP++RK G ++ E
Sbjct: 64 IQTTKVINESGLYSLILSSKLPTAKKFKRWVTSVVLPSIRKHGMFATE 111
>gi|282934410|ref|ZP_06339674.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|281301531|gb|EFA93811.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
Length = 268
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
MS + F F IRT+ D+ +FV KDVA LGY+N+ +A+ H KR + T
Sbjct: 1 MSELQIFNFNGENIRTLT-IDEEPYFVGKDVAEVLGYKNTKDALIRHVADDDKRGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q + +ISE +Y L++ S LP+A+KF+ WV EVLP +RK G+Y + +
Sbjct: 60 PSGRQTMTVISESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVVNN 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQL 143
+ L L++ A+Q KD Q+
Sbjct: 120 KSGLA--DLLQQAAEQLKQKDIQI 141
>gi|227431802|ref|ZP_03913829.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352485|gb|EEJ42684.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 237
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGG 62
+ F FE++++RT+ +D IWFV KDVA LGY S A++ H K + + G
Sbjct: 5 VQVFNFETSRVRTLNLEDV-IWFVGKDVADTLGYSASRNALSKHVDNDDKLTHQISASGQ 63
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+++ +I+E +Y L++ S P+A+KF+RWV EVLPT+R+TG Y + APK
Sbjct: 64 KREMTLINESGLYSLILSSKQPNAKKFKRWVTSEVLPTIRQTGGYQL-APK 113
>gi|125974155|ref|YP_001038065.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125714380|gb|ABN52872.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 265
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 7/106 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQ 64
EF K+ I K+ +F A D A LGY N ++A+ HCK + KR +P E I
Sbjct: 11 EFGELKVLVIDGKE---YFPATDCARMLGYSNPHKAVIDHCKYLTKREVPHPQNPEKTIN 67
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ I E D++RL+VKS LP+A++FE+WVF+EVLPT+RK G Y+ +
Sbjct: 68 -INYIPEGDLFRLIVKSQLPAAERFEKWVFDEVLPTIRKYGVYATD 112
>gi|160898695|ref|YP_001564277.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364279|gb|ABX35892.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 270
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN---EAINAHCKGVAKRYPL 57
MS ITPF+F+ ++I + + WF+AK+V+ LGY ++ ++ KG+ L
Sbjct: 1 MSNITPFKFQDHEITVLTNDSGEPWFIAKEVSGVLGYSEASAMTRTLDDDEKGLQV---L 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+T+GG Q+V +I+E +Y ++KS A++F++WV EVLP++R+TGSY+
Sbjct: 58 QTQGGTQRVIVINESGLYSAILKSERQEAKRFKKWVTSEVLPSIRRTGSYT 108
>gi|22296547|ref|NP_680507.1| putative antirepressor [Lactobacillus phage A2]
gi|6599316|emb|CAB63662.1| putative antirepressor [Lactobacillus phage A2]
Length = 160
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M+ + F+F+ ++RT+V D FV KD+A LGY A+N + KGV K
Sbjct: 1 MNELQHFDFKGRQVRTVV-VDNEPMFVGKDIAEVLGYSKPANAVNKYVPDKFKGVTK--- 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L T GG Q +I+EP +Y+L+ KS +P+A +F WV E+VLP++RK G+Y
Sbjct: 57 LMTPGGKQDFVVIAEPGLYKLVFKSDMPNADEFTDWVAEKVLPSIRKHGAY 107
>gi|169824680|ref|YP_001692291.1| putative phage-associated antirepressor [Finegoldia magna ATCC
29328]
gi|325849668|ref|ZP_08170871.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|167831485|dbj|BAG08401.1| putative phage-associated antirepressor [Finegoldia magna ATCC
29328]
gi|325480009|gb|EGC83087.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 244
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +AI H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAIYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|227500518|ref|ZP_03930574.1| phage antirepressor protein [Anaerococcus tetradius ATCC 35098]
gi|227217369|gb|EEI82697.1| phage antirepressor protein [Anaerococcus tetradius ATCC 35098]
Length = 244
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +AI H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAIYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|254975131|ref|ZP_05271603.1| prophage antirepressor [Clostridium difficile QCD-66c26]
gi|255314258|ref|ZP_05355841.1| prophage antirepressor [Clostridium difficile QCD-76w55]
gi|255516937|ref|ZP_05384613.1| prophage antirepressor [Clostridium difficile QCD-97b34]
gi|255650040|ref|ZP_05396942.1| prophage antirepressor [Clostridium difficile QCD-37x79]
gi|260686783|ref|YP_003217916.1| hypothetical protein CDR20291_1419 [Clostridium difficile R20291]
gi|306519575|ref|ZP_07405922.1| hypothetical protein CdifQ_05352 [Clostridium difficile QCD-32g58]
gi|260212799|emb|CBE03962.1| putative uncharacterized protein [Clostridium difficile R20291]
Length = 269
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 34/201 (16%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEP 72
+++ + WFV KD+A LGY+++++A+ H KGV + + T GG Q +++I+E
Sbjct: 17 VIELNGEFWFVGKDIAEQLGYKDTSDALKRHVDDEDKGVGE---IPTPGGNQNMKVINES 73
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
+Y L++ S LPSA+ F+RWV E+LP++R TG+Y++ L+ +T +HL E
Sbjct: 74 GLYSLILSSKLPSAKLFKRWVTNEILPSIRSTGTYNM--IDLQTKLPTTYKEALQHLIEQ 131
Query: 133 AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL-PSSD-------NDEYLTITQIGE 184
+ + QL L+ +++ IK L P +D N +TITQI +
Sbjct: 132 VEV----NEQLQLE-----------SKMKDQVIKELKPKADYTDMILKNKGLVTITQIAK 176
Query: 185 RLNPPQRARFLNKLLLKRGLQ 205
+ + +NK+L +RG+Q
Sbjct: 177 --DYGMSGKEMNKILHERGIQ 195
>gi|257866260|ref|ZP_05645913.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257873224|ref|ZP_05652877.1| prophage antirepressor [Enterococcus casseliflavus EC10]
gi|257800218|gb|EEV29246.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257807388|gb|EEV36210.1| prophage antirepressor [Enterococcus casseliflavus EC10]
Length = 257
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK- 58
M+ + F FE+N++RT++ D+ +FV KD+A LGY N+ +A++ H K R ++
Sbjct: 6 MNQLEIFNFENNEVRTVLVDDEP-YFVGKDIAEVLGYINTRDALSKHVDLEDKHRVAIRD 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T G Q V I+E +Y L++ S LP+A+KF+RWV +EVLP++RK G Y+
Sbjct: 65 TIGRSQNVVAINESGLYSLIISSKLPNAKKFKRWVTKEVLPSIRKHGMYA 114
>gi|218439362|ref|YP_002377691.1| prophage antirepressor [Cyanothece sp. PCC 7424]
gi|218172090|gb|ACK70823.1| prophage antirepressor [Cyanothece sp. PCC 7424]
Length = 230
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
MS + F FE+ ++R + D W VA+DV TAL +N+++ + ++ KG+ L
Sbjct: 1 MSDLIIFGFENQEVRFVGTPDHLEW-VAQDVCTALEIKNASDTLAKFDSDEKGITN---L 56
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
T GG+Q++ ++E +YRL+ KS A++F+RW+F EVLP+LR+TGSYS+ K
Sbjct: 57 NTLGGVQELLTVTEAGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSINQSK 112
>gi|282882756|ref|ZP_06291363.1| phage antirepressor protein [Peptoniphilus lacrimalis 315-B]
gi|281297417|gb|EFA89906.1| phage antirepressor protein [Peptoniphilus lacrimalis 315-B]
Length = 244
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ TI++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTIIEKDGEFFFIANEVATMLGYANPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|262046894|ref|ZP_06019854.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
gi|260572876|gb|EEX29436.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
Length = 267
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M+ +T F FE++++R +V D WFV KDVA LGY + A++ + KG+ +
Sbjct: 1 MNQLTLFNFENSQLR-VVKIDGEPWFVGKDVAQILGYSQPSVAVSKNVPTKDKGITE--- 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++T GG QKV IISEP +Y+L+ KS +A++F +V EVLP +RK G+Y
Sbjct: 57 METPGGKQKVTIISEPGMYKLIFKSHASNAERFNDYVATEVLPAIRKHGAY 107
>gi|260665450|ref|ZP_05866297.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260560718|gb|EEX26695.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 277
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
MS + F F IRT+ D+ +FV KDVA LGY+N+ +A+ H KR + T
Sbjct: 1 MSDLQIFNFSGADIRTLT-IDEEPYFVGKDVAEVLGYKNTKDALIRHVDDDDKRGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q + +ISE +Y L++ S LP+A+KF+ WV EVLP +RK G+Y + +
Sbjct: 60 PSGRQTMIVISESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVVNN 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQL 143
+ L L++ A Q KD Q+
Sbjct: 120 KSGLA--DLLQQAADQLKQKDIQI 141
>gi|269955332|ref|YP_003325121.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
gi|269304013|gb|ACZ29563.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
Length = 259
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F+F +R I D+ + WFVA DVA AL N + +++ + ++T GG Q
Sbjct: 8 FDFHGAGVRIITDEHGDPWFVAADVAAALSLGNIHSSLSLLDDDEKGLHTVETLGGAQTT 67
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA---PKLRA 116
++EP +Y L+++S P A+ F+RWV +VLP +RKTGSY V A P+L A
Sbjct: 68 STVNEPGLYSLVLRSRKPEAKAFKRWVTHDVLPAIRKTGSYGVPALTGPELMA 120
>gi|227496445|ref|ZP_03926729.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
gi|226834027|gb|EEH66410.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
Length = 262
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
MS + PF++E R + D WFVA DV ALG N ++ + KGV + +
Sbjct: 1 MSEVIPFDYEGTNFRALQDSAGEPWFVANDVCEALGLSNPRSSLALLDEDEKGV---HSM 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T GG Q + I+SE +Y L+++S P A+ F+RWV EVLP +R+ G Y+
Sbjct: 58 DTPGGTQNLAIVSEAGLYSLILRSRKPEAKAFKRWVTHEVLPAIRRHGVYA 108
>gi|94995078|ref|YP_603176.1| phage antirepressor protein [Streptococcus pyogenes MGAS10750]
gi|94548586|gb|ABF38632.1| phage antirepressor protein [Streptococcus pyogenes MGAS10750]
Length = 244
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|307067493|ref|YP_003876459.1| hypothetical protein SPAP_0868 [Streptococcus pneumoniae AP200]
gi|306409030|gb|ADM84457.1| Uncharacterized phage-encoded protein [Streptococcus pneumoniae
AP200]
Length = 244
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|261207383|ref|ZP_05922070.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|289566797|ref|ZP_06447209.1| antirepressor [Enterococcus faecium D344SRF]
gi|260078443|gb|EEW66147.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|289161424|gb|EFD09312.1| antirepressor [Enterococcus faecium D344SRF]
Length = 261
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 114/215 (53%), Gaps = 35/215 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+T F F ++RT++ D+ +FV KDVA LGYE ++ A+ H + + +
Sbjct: 4 MNTPQIFNFGQQEVRTVLLNDEP-YFVGKDVAEILGYERADNAVRNHVDEEDRLMHRISA 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
G + + II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y + E + +
Sbjct: 63 SGQNRNMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 122
Query: 119 ASTVLRVHKHLEE------LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T++++ L+E +A+Q K+ KI+ +D + L S+D
Sbjct: 123 PDTIIQLATQLKEERIGRLIAEQ----------KIAEYEPKISYLDSI-------LSSTD 165
Query: 173 NDEYLTITQIGER--LNPPQRARFLNKLLLKRGLQ 205
+ +TI+QI ++P Q +NKLL K G+Q
Sbjct: 166 S---VTISQIAADYGMSPQQ----MNKLLHKLGIQ 193
>gi|148912801|ref|YP_001293380.1| Conserved hypothetical protein; putative antirepressor [Pseudomonas
phage F10]
Length = 265
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKTE 60
+ P++F S +++ +VD++ WF+A +VA LGY ++ E ++ K + L T
Sbjct: 3 LIPYDFNSKRLQVLVDENGEPWFIAMEVAEILGYSDAYEMTKRLDEDEKSNRQIAGLGTA 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV---EAPKLRAT 117
G + V I+E +Y ++ S P A+ F+RWV +VLP++R+TGSYS+ +AP L +
Sbjct: 63 SGGRGVTTINESGLYSSIIGSNKPEAKPFKRWVTHDVLPSIRRTGSYSIGHQQAPALTSD 122
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + E +++ L + L R K+ D L A + P D ++
Sbjct: 123 ACQII-------ESMSRTLNLAPSATLGMYQRLGAKVGHADLLPAYTVDS-PDQDGTSHV 174
Query: 178 T--ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
T ++ + AR + KL+ GL V ++S RP+ KG
Sbjct: 175 TAALSDLLRSHEVQASARQVYKLMEAAGL-VERLS---RPSSKG 214
>gi|297588649|ref|ZP_06947292.1| phage antirepressor protein [Finegoldia magna ATCC 53516]
gi|297574022|gb|EFH92743.1| phage antirepressor protein [Finegoldia magna ATCC 53516]
Length = 244
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|307154373|ref|YP_003889757.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306984601|gb|ADN16482.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 253
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYP 56
MS +T F FE ++R + D W VA+DV LG E++ +A+ + KG+A
Sbjct: 1 MSNLTIIFTFEEQQVRFVGTTDNPEW-VAQDVCDVLGIESARDALQDFDPDEKGIA---A 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T GG++ + ++E +YRL+ +S P A+KF+RW+F EV+P++R+TGSYSV
Sbjct: 57 IPTSGGLRSMLTVTEAGLYRLIFRSNKPVAKKFQRWIFHEVIPSIRRTGSYSVPGANTEV 116
Query: 117 TSASTVLRVHKHLEELAK 134
+ RV + E AK
Sbjct: 117 ETIGLAERVERLELEQAK 134
>gi|326802732|ref|YP_004320550.1| BRO family, N-terminal domain protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650785|gb|AEA00968.1| BRO family, N-terminal domain protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 244
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|294619297|ref|ZP_06698766.1| phage anti-repressor protein [Enterococcus faecium E1679]
gi|291594457|gb|EFF25865.1| phage anti-repressor protein [Enterococcus faecium E1679]
Length = 301
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 23/209 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+T F F ++RT++ D+ +FV KDVA LGYE ++ A+ H + + +
Sbjct: 44 MNTPQIFNFGQQEVRTVLLNDEP-YFVGKDVAEILGYERADNAVRNHVDEEDRLMHRISA 102
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
G + + II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y + E + +
Sbjct: 103 SGQNRNMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 162
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + L Q K+ KI+ +D + L S+D+ +T
Sbjct: 163 PDTIIQLATKLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---VT 208
Query: 179 ITQIGER--LNPPQRARFLNKLLLKRGLQ 205
I+QI ++P Q +NKLL K G+Q
Sbjct: 209 ISQIAADYGMSPQQ----MNKLLHKLGIQ 233
>gi|256821181|ref|YP_003142380.1| prophage antirepressor [Anaerococcus prevotii DSM 20548]
gi|256799161|gb|ACV29815.1| prophage antirepressor [Anaerococcus prevotii DSM 20548]
Length = 244
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|270692618|ref|ZP_06222930.1| BRO family protein [Haemophilus influenzae HK1212]
gi|270316045|gb|EFA28074.1| BRO family protein [Haemophilus influenzae HK1212]
Length = 184
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 35 LGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
LGY N +AI+ HCK GVAKRY + G ++ I+EP++YRL++KS P A+ FE W
Sbjct: 1 LGYANPRDAISKHCKVAGVAKRY-ISYPSGKKEATFINEPNLYRLIIKSRKPEAEPFEAW 59
Query: 93 VFEEVLPTLRKTGSYSVEAPKL 114
VFEEVLP +RKTG Y ++ +L
Sbjct: 60 VFEEVLPQIRKTGKYQLQPQQL 81
>gi|325847959|ref|ZP_08170113.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480787|gb|EGC83842.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 244
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKMFKAWVTREVLPSIRKNGGY 109
>gi|193077627|gb|ABO12461.2| hypothetical protein A1S_2034 [Acinetobacter baumannii ATCC 17978]
Length = 266
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 9/174 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKT 59
M+ I+ F F ++ + D WF DV L + ++ + + KG+A + T
Sbjct: 1 MNAISNFTFHNDYNVRVQLIDAEPWFCLADVCCVLSVDRTSRLLRDLDEKGLADCH-TPT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP--KLRAT 117
GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG Y P K
Sbjct: 60 NGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYEAPKPVEKRNYL 119
Query: 118 SASTVLRVHKHLEELAKQAGLKD--NQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ S + + + + A G K NQ + R V TGV +++HLP
Sbjct: 120 NNSDMNNIKRLIWTCADHFGHKGSFNQAIWACLRDV---TGVPSPAKFEVEHLP 170
>gi|256544723|ref|ZP_05472095.1| phage antirepressor protein [Anaerococcus vaginalis ATCC 51170]
gi|256399612|gb|EEU13217.1| phage antirepressor protein [Anaerococcus vaginalis ATCC 51170]
Length = 244
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIV 111
>gi|153954528|ref|YP_001395293.1| prophage antirepressor [Clostridium kluyveri DSM 555]
gi|146347386|gb|EDK33922.1| Predicted prophage antirepressor [Clostridium kluyveri DSM 555]
Length = 267
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQKVRIISEPDVYRLLVK 80
I FVA D+A ALGY+N+N+AI HC+ VAK +P +++ + +V I E D+YRL+
Sbjct: 24 IHFVAVDIARALGYKNTNDAILKHCRWVAKCEVPHP-QSKTKVIEVNAIPEGDIYRLVAN 82
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSY 107
S LP AQ+FE W+F++VLP + TG Y
Sbjct: 83 SELPGAQEFESWIFDKVLPQINHTGGY 109
>gi|307150782|ref|YP_003886166.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306981010|gb|ADN12891.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 230
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
MS + F FE+ K+R + DQ W +A+DV L N+ + KG+ Y +
Sbjct: 1 MSDLIVFGFENQKVRCVGTPDQPEW-IAQDVCDVLSVGLASNTLRNFDFDEKGM---YSI 56
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T GG Q++ ++EP +YRL+ KS A++F+RW+F EVLP+LR+TGSYS++ + ++
Sbjct: 57 HTPGGEQEMLTVTEPGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSIQQNQ-QSP 115
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLL 145
A V R + EL + Q L+
Sbjct: 116 KALIVARAINEINELVVDISPRLAQYLI 143
>gi|19745758|ref|NP_606894.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|139474141|ref|YP_001128857.1| putative phage antirepressor protein [Streptococcus pyogenes str.
Manfredo]
gi|306827713|ref|ZP_07460986.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
gi|19747899|gb|AAL97393.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|134272388|emb|CAM30644.1| putative phage antirepressor protein [Streptococcus pyogenes str.
Manfredo]
gi|304430099|gb|EFM33135.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
Length = 253
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLK-TEGGIQ 64
F F+ ++RT+ D+ +FV KDVA LGY + AI +H K+ P++ T GG Q
Sbjct: 5 FNFKGQEVRTVTIDDEP-YFVGKDVAEILGYAKARNAIASHVDDEDKKDAPIQGTLGGTQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ II+E +Y L++ S LP A++F+RWV EVLPT+RK G Y+ +
Sbjct: 64 TMTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPTIRKHGMYATD 109
>gi|304440044|ref|ZP_07399937.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371536|gb|EFM25149.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 244
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y +
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYII 111
>gi|150017135|ref|YP_001309389.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
gi|149903600|gb|ABR34433.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG-------GIQKVR--IISEPDVY 75
+ V D+A ALGY+ N+AI+ HC+G K G IQ V +I E D+Y
Sbjct: 25 YAVGIDIAKALGYKKPNDAISRHCRGSVKHGVGVVTGKRKDGTDAIQNVEMSVIPEGDIY 84
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
RL+ KS LP A+KFE W+F+EVLP +RKTG Y+ +
Sbjct: 85 RLVAKSELPGAEKFEAWIFDEVLPCIRKTGMYATD 119
>gi|300814660|ref|ZP_07094911.1| BRO family, N-terminal domain protein [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300511279|gb|EFK38528.1| BRO family, N-terminal domain protein [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 244
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|150018030|ref|YP_001310284.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
gi|149904495|gb|ABR35328.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
Length = 250
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 9/95 (9%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKR----YPLKTEGGIQKVR-----IISEPDVY 75
+ V D+A ALGY+N +AI HCKGV K K G + ++ +I E D+Y
Sbjct: 25 YAVGIDIAKALGYKNPRDAILRHCKGVVKHDIGVVTGKRRDGTEVIQNIEMSVIPEGDIY 84
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
RL KS LP A+KFE W+F+EVLP++RKTG Y+ +
Sbjct: 85 RLAAKSELPGAEKFEAWIFDEVLPSIRKTGMYATD 119
>gi|302380822|ref|ZP_07269286.1| BRO family, N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
gi|302311422|gb|EFK93439.1| BRO family, N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
Length = 244
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|195867515|ref|ZP_03079518.1| phage antirepressor protein [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|195660759|gb|EDX54013.1| phage antirepressor protein [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
Length = 244
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|320120505|gb|ADW16170.1| hypothetical protein HMPREF0389_01726 [Filifactor alocis ATCC
35896]
Length = 114
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 9/112 (8%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRY 55
MS++ FE E K+ T+++KD +F+ K+VA LGY N+ +A+ H KGV K
Sbjct: 1 MSSLITFENMEFGKL-TVMEKDGEFFFIGKEVAEKLGYSNTRDALVRHIAEEDKGVVKHD 59
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L GG Q II+E +Y L++ S LP A+ F+RWV EVLP++RK G Y
Sbjct: 60 TL---GGRQSFTIINESGLYSLILSSKLPQAKDFKRWVTTEVLPSIRKNGGY 108
>gi|313890912|ref|ZP_07824535.1| BRO family, N-terminal domain protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|313120709|gb|EFR43825.1| BRO family, N-terminal domain protein [Streptococcus pseudoporcinus
SPIN 20026]
Length = 244
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|310286594|ref|YP_003937852.1| phage anti-repressor protein [Bifidobacterium bifidum S17]
gi|309250530|gb|ADO52278.1| putative phage anti-repressor protein [Bifidobacterium bifidum S17]
Length = 260
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + PF+F+ N++R + DK WFVAKDV LGY+N+++AI H K L E
Sbjct: 4 NNLQPFDFKGNQVRILTDKKGEPWFVAKDVCNVLGYQNASKAITDHVDAGDK---LNNES 60
Query: 62 ----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G + +I+E +Y L++ S L A++F +WV EVLP +R+TG Y
Sbjct: 61 LSSLGQRGGWVINESGLYCLILSSKLERAREFRKWVTSEVLPQIRRTGGY 110
>gi|260664719|ref|ZP_05865571.1| prophage antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260561784|gb|EEX27756.1| prophage antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 256
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 90/181 (49%), Gaps = 25/181 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+ + F FE ++RT V D +FV KDVA LGY N + IN H ++ Y T
Sbjct: 1 MNNLQVFNFEDARVRT-VSIDGKPYFVGKDVAEILGYSNGSRDINRHVDSEDRQNYQNGT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE--------- 110
+ + +I+E +Y L++ S LP+A+KF+RWV EVLPT+RK G+Y E
Sbjct: 60 FESPRGLTVINESGLYSLILSSKLPTAKKFKRWVTSEVLPTIRKHGAYMTEQKIEEALLN 119
Query: 111 -------APKLRATSASTVLRVHKHLEELAKQAGLKD------NQLLLKVNRGVTKITGV 157
A +L+A +L K +EE+ +A D N +L++ + GV
Sbjct: 120 PDTLITLAKQLKAEKEQRLL-AQKQVEEMTPKAIFHDAVASAENTMLVRDVAHFLRQNGV 178
Query: 158 D 158
D
Sbjct: 179 D 179
>gi|313889093|ref|ZP_07822749.1| BRO family, N-terminal domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844833|gb|EFR32238.1| BRO family, N-terminal domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 244
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE + T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKKFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|322689040|ref|YP_004208774.1| phage antirepressor [Bifidobacterium longum subsp. infantis 157F]
gi|320460376|dbj|BAJ70996.1| putative phage antirepressor [Bifidobacterium longum subsp.
infantis 157F]
Length = 259
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
++I F+F+ +RT+ D+ WFVAKDV LG ENS +A A K ++G
Sbjct: 3 NSIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGLENSRKA-TAELDSDEKNTVTISDG 61
Query: 62 --GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G IISEP +YRL+++S P A++F+RWV EVLP++R+ G+Y E+
Sbjct: 62 IAGNPNKTIISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTES 113
>gi|307544693|ref|YP_003897172.1| prophage antirepressor [Halomonas elongata DSM 2581]
gi|307216717|emb|CBV41987.1| prophage antirepressor [Halomonas elongata DSM 2581]
Length = 262
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M +I PF F+S ++R I D FVAKDVA ALGY N A+ H +GV +
Sbjct: 1 MQSIQPFNFDSQQVRVIQGDDGEPMFVAKDVAAALGY-NWQVALVKHVPEEWRGVTQS-- 57
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY---SVEAPK 113
T G+Q++ +++E +Y + +S P A F++W+ EVLP++RKTG Y +EA
Sbjct: 58 -NTPSGVQRLTVLTEQGLYFFVARSDKPKALPFQKWLAGEVLPSIRKTGQYQAPGIEAAN 116
Query: 114 LRATSA 119
+ AT A
Sbjct: 117 VPATMA 122
>gi|212695600|ref|ZP_03303728.1| hypothetical protein ANHYDRO_00117 [Anaerococcus hydrogenalis DSM
7454]
gi|212677478|gb|EEB37085.1| hypothetical protein ANHYDRO_00117 [Anaerococcus hydrogenalis DSM
7454]
Length = 244
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTLGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|307244380|ref|ZP_07526491.1| BRO family, N-terminal domain protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492199|gb|EFM64241.1| BRO family, N-terminal domain protein [Peptostreptococcus stomatis
DSM 17678]
Length = 243
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 9/112 (8%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRY 55
MS++ FE E K+ T+++KD +F+ K+VA LGY N+ +A+ H KGV K
Sbjct: 1 MSSLITFENMEFGKL-TVMEKDGEFFFIGKEVAEKLGYSNTRDALVRHIAEEDKGVVKH- 58
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GG Q II+E +Y L++ S LP A+ F+RWV EVLP++RK G Y
Sbjct: 59 --DTLGGRQSFTIINESGLYSLILSSKLPQAKDFKRWVTTEVLPSIRKNGGY 108
>gi|260887043|ref|ZP_05898306.1| toxin-antitoxin system, toxin component, Bro family [Selenomonas
sputigena ATCC 35185]
gi|330839179|ref|YP_004413759.1| prophage antirepressor [Selenomonas sputigena ATCC 35185]
gi|260863105|gb|EEX77605.1| toxin-antitoxin system, toxin component, Bro family [Selenomonas
sputigena ATCC 35185]
gi|329746943|gb|AEC00300.1| prophage antirepressor [Selenomonas sputigena ATCC 35185]
Length = 247
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 8/139 (5%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQKVRI 68
E +RTI+ K+ +FV KDVA+ LGY AI AH K + G +++ I
Sbjct: 12 EFGTVRTII-KNGEPYFVGKDVASILGYTAERNAIAAHVDEEDKLTHRFSASGQNREMTI 70
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
I+E +Y L++ S LP+A+KF+RWV EVLP++RKTGSY+ + K S K
Sbjct: 71 INESGLYSLILSSKLPAAKKFKRWVTSEVLPSIRKTGSYTAKHAKPDDAMQS------KR 124
Query: 129 LEELAKQAGLKDNQLLLKV 147
LE + + A + LLLK+
Sbjct: 125 LEVMERNARTRAANLLLKI 143
>gi|283852564|ref|ZP_06369831.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
gi|283572012|gb|EFC20005.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
Length = 323
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE----NSNEAINAHCKGVAKRYPL 57
S PF FES++IRT+++ D N WFVA+DV A+ S AI K V K P
Sbjct: 13 SNPVPFAFESHEIRTVINGDGNPWFVARDVCAAMNISWQGMKSLSAIPDTWKRVGK-LPT 71
Query: 58 KTEGG---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+T G + V ISEP VY+L +S P A +F W+ EV+P LR+ G Y +
Sbjct: 72 RTRDGRKQVNDVATISEPAVYKLAFRSNKPEADRFTNWIASEVIPALRRQGKYEI 126
>gi|291087469|ref|ZP_06346557.2| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
gi|291074759|gb|EFE12123.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
Length = 161
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 8/102 (7%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQK 65
E ++RT++ ++ WFV KDVA L Y N +AI+ H KGV K T GG+Q
Sbjct: 13 EFGQVRTLIINNEP-WFVGKDVAEILNYTNPRKAISDHIDEEDKGVTK---CDTLGGVQN 68
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP+A++F+ WV EVLP++RKTG Y
Sbjct: 69 LTIINESGLYSLILSSKLPNAKRFKHWVTSEVLPSIRKTGGY 110
>gi|325956990|ref|YP_004292402.1| prophage antirepressor [Lactobacillus acidophilus 30SC]
gi|325333555|gb|ADZ07463.1| prophage antirepressor [Lactobacillus acidophilus 30SC]
Length = 269
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------GVAKR 54
M I F+FE N++RT+ D+ +FV KDVA LGY N+ +A+ H GV R
Sbjct: 1 MEEIKLFKFEGNEVRTLKINDEP-YFVGKDVAEILGYSNTRKALQDHVDLEDKKDGVTIR 59
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPK 113
+ G Q+ II+E +Y L++ S +P+A++F+RWV EVLP +RK G+Y E +
Sbjct: 60 DSI---GRSQRPTIINESGLYSLILSSKMPNAKRFKRWVTSEVLPAIRKHGAYMTDEKIE 116
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQL 143
T T++++ L++ +Q L + QL
Sbjct: 117 EVLTDPDTIIKLATQLKD-ERQQRLIEQQL 145
>gi|288573073|ref|ZP_06391430.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568814|gb|EFC90371.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 370
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S +T FEFE +R +V D N W+VAKDV L N EA+ + LK+ G
Sbjct: 112 SDVTLFEFERMVVR-VVFIDGNPWWVAKDVCDILSLGNVTEALRGLDEDELTSVILKSGG 170
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+++++I+EP +Y L+++S P A++F+RW+ E+LPT+RKTGSY++
Sbjct: 171 QSREMKVINEPGLYSLILRSRKPEAKRFKRWLTHELLPTIRKTGSYAL 218
>gi|303233469|ref|ZP_07320133.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
gi|302495420|gb|EFL55162.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
Length = 244
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 68/114 (59%), Gaps = 13/114 (11%)
Query: 1 MSTITPFEFESNKIR---TIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAK 53
+S + FE NKI T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFE---NKIFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK 58
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 ---WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKTWVTREVLPSIRKNGGY 109
>gi|325300515|ref|YP_004260432.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324320068|gb|ADY37959.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 283
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGG---IQKVRII 69
I T+ ++ + F DVA ALGY ++ +A+ HCKGV P + + G + + I
Sbjct: 18 INTVETENGKVLFKGNDVARALGYSDAPQAVRMHCKGVVVLTTPSENQYGTVVMLPTKYI 77
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
E DVYRL+++S LP A+KF+ WV EEVLP++RK G Y +A R + L
Sbjct: 78 PEADVYRLVMRSKLPEAEKFQDWVCEEVLPSIRKHGGYLTDAALQRVVTEPDFL 131
>gi|255652579|ref|ZP_05399481.1| antirepressor, phage associated protein [Clostridium difficile
QCD-37x79]
Length = 248
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-VRIISE 71
+IRTI + D +WFV KDVA ALGY N+ EA+ H + +G + ++I +E
Sbjct: 15 EIRTI-EIDNEVWFVGKDVAIALGYANTREALKTHIDSEDIADVVIHDGSQNRNMKITNE 73
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+Y L+ S LP+A+KF+ WV +EVLP++RKTGSY +
Sbjct: 74 SGLYSLIFGSKLPTAKKFKNWVTKEVLPSIRKTGSYDI 111
>gi|220903506|ref|YP_002478818.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867805|gb|ACL48140.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 180
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN--------EAINAHCKGVAKRYPLK 58
F F ++ +R D+ +WFVAKDVA AL Y+ S+ ++I KG+ P+K
Sbjct: 8 FVFGNSDVRVAQDETGVLWFVAKDVAEALEYQESSITQIINLVQSIPEEWKGLK---PIK 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GG Q+V ++EP +Y L +S P A F++W++ EVLP++RKTG Y +
Sbjct: 65 TLGGRQEVHCLAEPGLYWFLGRSDKPKALPFQKWIYGEVLPSIRKTGGYDL 115
>gi|160886636|ref|ZP_02067639.1| hypothetical protein BACOVA_04648 [Bacteroides ovatus ATCC 8483]
gi|156107047|gb|EDO08792.1| hypothetical protein BACOVA_04648 [Bacteroides ovatus ATCC 8483]
Length = 269
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 113/232 (48%), Gaps = 38/232 (16%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK- 58
M+ IT F+ E ++RT + F A DVA ALGY N+ +AI+ HCK V KR +
Sbjct: 1 MNEITIFKNERFGEVRTATSESGEPLFAAVDVARALGYANTRDAISKHCKRVTKRDGVSR 60
Query: 59 -------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ ++ I+E DV RL+++S LP A+ F+ WV EE+LP++RK G+Y
Sbjct: 61 TTNQHGVVTNQVVEMSFINEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAY---- 116
Query: 112 PKLRATSASTVLRVHKHLEELAK-QAGLKDNQ---LLLKVNRGVTKITGVDQLEAMDIKH 167
+ TV+++ ++ + L + LK Q LL+ R +EAM K
Sbjct: 117 -----MTPETVVQMFQNPDALIQLLTTLKSEQEQNALLRAQREA----NAKAIEAMQPKA 167
Query: 168 ------LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
L SS +T I +L A+ LNK L + G+Q K SG Y
Sbjct: 168 EYFDTVLSSSS---LITTNTIAAKLGIS--AQRLNKFLCESGIQY-KQSGLY 213
>gi|330433318|gb|AEC18377.1| BRO family, N-terminal domain protein [Gallibacterium anatis
UMN179]
Length = 226
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS +T F FE ++I+TI++ ++ I+F A +A L Y N ++AI H + KR +
Sbjct: 1 MSNLTIFNFEHSQIQTIIENNE-IFFRATQLAELLEYSNPHKAIKDHVDPDDLTKREVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T Q+V ++E +Y L++ S LPSA+K +RWV EVLP +RKTG YS++ +L
Sbjct: 60 TIRRKQRVLFVNESGMYSLVLGSKLPSAKKVKRWVTSEVLPQIRKTGKYSLQNQQL 115
>gi|229551636|ref|ZP_04440361.1| probable antirepressor protein [Lactobacillus rhamnosus LMS2-1]
gi|229314954|gb|EEN80927.1| probable antirepressor protein [Lactobacillus rhamnosus LMS2-1]
Length = 253
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT V + IWF A DV ALG +N ++AI + R+ L +
Sbjct: 1 MNELQLFQFEDNQIRT-VSSNGIIWFAAVDVTDALGIKNPSDAIKPLDEDERTRFNLGRQ 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y
Sbjct: 60 GS---ANFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAY 103
>gi|160884995|ref|ZP_02065998.1| hypothetical protein BACOVA_02991 [Bacteroides ovatus ATCC 8483]
gi|156109345|gb|EDO11090.1| hypothetical protein BACOVA_02991 [Bacteroides ovatus ATCC 8483]
Length = 269
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 113/232 (48%), Gaps = 38/232 (16%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK- 58
M+ IT F+ E ++RT + F A DVA ALGY N+ +AI+ HCK V KR +
Sbjct: 1 MNEITIFKNERFGEVRTATSESGEPLFAAVDVARALGYANTRDAISKHCKRVTKRDGVSR 60
Query: 59 -------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ ++ I+E DV RL+++S LP A+ F+ WV EE+LP++RK G+Y
Sbjct: 61 TTNQHGVVTNQVVEMSFINEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAY---- 116
Query: 112 PKLRATSASTVLRVHKHLEELAK-QAGLKDNQ---LLLKVNRGVTKITGVDQLEAMDIKH 167
+ TV+++ ++ + L + LK Q LL+ R +EAM K
Sbjct: 117 -----MTPETVVQMFQNPDALIQLLTTLKSEQEQNALLRAQREA----NAKAIEAMQPKA 167
Query: 168 ------LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
L SS +T I +L A+ LNK L + G+Q K SG Y
Sbjct: 168 EYFDTVLSSSS---LITTNTIAAKLGIS--AQRLNKFLCESGIQY-KQSGLY 213
>gi|41179234|ref|NP_958573.1| putative antirepressor [Lactobacillus prophage Lj965]
gi|42518392|ref|NP_964322.1| Lj965 prophage antirepressor [Lactobacillus johnsonii NCC 533]
gi|38731504|gb|AAR27450.1| putative antirepressor [Lactobacillus prophage Lj965]
gi|41582677|gb|AAS08288.1| Lj965 prophage antirepressor [Lactobacillus prophage Lj965]
Length = 278
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKTEGGIQK 65
F+FE+N+IR ++ + WFV KD+A LGY N+ +AI H R + T G Q
Sbjct: 10 FDFENNQIR-VLKINNEPWFVGKDLANVLGYSNTQKAIRDHIDPDDLRGERIVTPSGKQM 68
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
I +E +Y L++ S LPSA+KF+RWV EVLP +R+ G+Y + ++ S
Sbjct: 69 TIITNESGMYSLILSSKLPSAKKFKRWVTSEVLPAIREDGAYITDNKAMQLMS 121
>gi|322412205|gb|EFY03113.1| putative antirepressor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 253
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLK-TEGGIQ 64
++F+ ++RT V D +FV KDVA LGY + AI +H K+ P++ T GG Q
Sbjct: 5 YKFKGQEVRT-VTIDNEPYFVGKDVAEILGYAKARNAIASHVDDEDKKDAPIQGTLGGTQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ II+E +Y L++ S LP A++F+RWV EVLPT+RK G Y+ +
Sbjct: 64 TMTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPTIRKHGMYATD 109
>gi|37527835|ref|NP_931180.1| hypothetical protein plu3980 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787271|emb|CAE16352.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 190
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TEG 61
++TPF FE+ ++RT++ K+ N WFVA+DV AL NS EAI A K L T G
Sbjct: 5 SVTPFIFENQQVRTLI-KNGNFWFVAQDVCDALKITNSREAI-AKLGDDEKDVALSDTLG 62
Query: 62 GIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G QKV II+E +Y L + K TLP +F +WV EVLP +RKTGSY
Sbjct: 63 GEQKVNIINESGMYFLTIRCRDAVKKGTLP--HRFRKWVTSEVLPLIRKTGSY 113
>gi|255092521|ref|ZP_05321999.1| prophage antirepressor [Clostridium difficile CIP 107932]
gi|260683185|ref|YP_003214470.1| hypothetical protein CD196_1442 [Clostridium difficile CD196]
gi|260209348|emb|CBA62771.1| putative uncharacterized protein [Clostridium difficile CD196]
Length = 257
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEP 72
++D + WFV KDVA LGY+++++A+ H KGV + + T GG Q ++II+E
Sbjct: 18 VIDLNGEPWFVGKDVAETLGYKDTSDALKRHVDDEDKGVGE---IPTPGGNQNMKIINES 74
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+Y L++ S L +A+KF+ WV +VLP++RKTG+YS
Sbjct: 75 GLYSLILSSKLLTAKKFKHWVTRDVLPSIRKTGTYS 110
>gi|223984990|ref|ZP_03635090.1| hypothetical protein HOLDEFILI_02394 [Holdemania filiformis DSM
12042]
gi|239624256|ref|ZP_04667287.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|223963061|gb|EEF67473.1| hypothetical protein HOLDEFILI_02394 [Holdemania filiformis DSM
12042]
gi|239520642|gb|EEQ60508.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 255
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-----VAKRYPLKTEG--G 62
E IRT+ +++ + F DVATALGY N +A+ H +G + + K +G
Sbjct: 11 EFGSIRTL-EQNGKVLFCGTDVATALGYTNPRKAVRDHTRGGTKCSIGVQTGKKADGSPA 69
Query: 63 IQKVRI--ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATSA 119
+Q V + I E D+YRL+ S LPSA++FE+WVF+EVLP +RK G+Y + ATS
Sbjct: 70 VQMVEMLFIPEGDLYRLIAHSKLPSAERFEQWVFDEVLPAIRKHGAYLTKEKLWEIATSP 129
Query: 120 STVLRVHKH-LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++++ L E + A L++ LL+ +K D +D+ H S N
Sbjct: 130 EALIKLCSELLAEREENASLREENALLE-----SKAAFYDLF--IDLNH---STN----- 174
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + L P+R RF+ LL KR SG P K G
Sbjct: 175 LRTTAKELLVPER-RFVRFLLEKR-FVYRTASGNVLPYAKPANEG 217
>gi|307692652|ref|ZP_07634889.1| prophage antirepressor [Ruminococcaceae bacterium D16]
Length = 255
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-----VAKRYPLKTEG--G 62
E IRT+ +++ + F DVATALGY N +A+ H +G + + K +G
Sbjct: 11 EFGSIRTL-EQNGKVLFCGTDVATALGYTNPRKAVRDHTRGGTKCSIGVQTGKKADGSPA 69
Query: 63 IQKVRI--ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATSA 119
+Q V + I E D+YRL+ S LPSA++FE+WVF+EVLP +RK G+Y + ATS
Sbjct: 70 VQMVEMLFIPEGDLYRLIAHSKLPSAERFEQWVFDEVLPVIRKHGAYLTKEKLWEIATSP 129
Query: 120 STVLRVHKH-LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++++ L E + A L++ LL+ +K D +D+ H S N
Sbjct: 130 EALIKLCSELLAEREENASLREENALLE-----SKAAFYDLF--IDLNH---STN----- 174
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + L P+R RF+ LL KR SG P K G
Sbjct: 175 LRTTAKELLVPER-RFVRFLLEKR-FVYRTASGNVLPYAKPANEG 217
>gi|312114251|ref|YP_004011847.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
gi|311219380|gb|ADP70748.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
Length = 256
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLK 58
+ I PF+FE N +R IV++D WFV DV L N A + H + + +
Sbjct: 5 AAIVPFDFEGNNVR-IVNRDGEAWFVLADVCRVLEIANVGNASARLKEHEQNSIRLTDVI 63
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS---VEAPKLR 115
G V II+EP YRL+++S P+A++F+ WV EVLP++RKTGSYS E P+ R
Sbjct: 64 RRGN-PNVTIINEPGFYRLVLRSDKPAAERFQDWVVTEVLPSIRKTGSYSARQAEEPRRR 122
>gi|148986125|ref|ZP_01819111.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP3-BS71]
gi|149004088|ref|ZP_01828893.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP14-BS69]
gi|147757900|gb|EDK64909.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP14-BS69]
gi|147921839|gb|EDK72966.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP3-BS71]
gi|301799176|emb|CBW31689.1| unnamed protein product [Streptococcus pneumoniae OXC141]
Length = 236
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQK 65
F F ++RT+ D+ WFV KDVA LGY + AI H + A + + T GG Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAITLHVDEEDALKQGIPTSGGTQD 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 MLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 105
>gi|12697190|emb|CAC28354.1| putative antirepressor [Neisseria gonorrhoeae]
Length = 128
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQK 65
F F ++RT+ D+ WFV KDVA LGY + AI H + A + + T GG Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQD 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 MLIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGF 105
>gi|315650289|ref|ZP_07903361.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
gi|315487400|gb|EFU77710.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
Length = 259
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Query: 25 WFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
WFV KDVA LGY N +A++ H KGVAK T GG Q + +I+E +Y L++
Sbjct: 28 WFVGKDVAEVLGYSNPRDALSKHVDSEDKGVAK---CDTLGGSQDLTVINESGLYSLILS 84
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
S LP+A+ F+RWV EVLP +RK G Y+ E
Sbjct: 85 SKLPNAKAFKRWVTSEVLPAIRKHGLYAKE 114
>gi|303234375|ref|ZP_07321014.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
gi|302494491|gb|EFL54258.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
Length = 244
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++KD +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKIFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP+++K G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIKKNGGY 109
>gi|308180883|ref|YP_003925011.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308046374|gb|ADN98917.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 250
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF FE +++RTI +++ IWF D++ +LG NS+ AI + ++ L
Sbjct: 1 MNQITPFNFEGHQVRTI-ERENIIWFAMPDISKSLGLSNSSVAIKSLDNDEVTKFNL--- 56
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS- 118
GG+ ISEP +Y+L+ S P A++F RWV VLP++RK G Y + T
Sbjct: 57 GGLSGNTNFISEPGLYKLIGASRKPEAKRFNRWVTHNVLPSIRKNGVYMTDQTAYDITHD 116
Query: 119 ----ASTVLRVHKHLE-------ELAKQAGLKDNQLLLKVNRGVTKITGV 157
+L+ L+ EL QA D+ L N+G+ I+ +
Sbjct: 117 KDALGDLLLKAGSQLKQKDLVIRELKPQADYTDSML---ANKGLETISMI 163
>gi|32469446|ref|NP_862854.1| gp15 [Streptococcus phage SM1]
gi|32441598|gb|AAP81897.1| gp15 [Streptococcus phage SM1]
Length = 239
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQK 65
F F ++RT+ D+ WFV KDVA LGY + AI H + A + + T GG Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQD 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 MLIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGF 105
>gi|167039880|ref|YP_001662865.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300915306|ref|ZP_07132620.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307724796|ref|YP_003904547.1| prophage antirepressor [Thermoanaerobacter sp. X513]
gi|166854120|gb|ABY92529.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300888582|gb|EFK83730.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307581857|gb|ADN55256.1| prophage antirepressor [Thermoanaerobacter sp. X513]
Length = 263
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPL 57
M+ IT F +E N +RT++ KD N W+V KDV + L NS + +++ KGV +
Sbjct: 1 MNKITLFNYEGNTVRTVM-KDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVD---II 56
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
T GG Q+V II+E +Y +++ S P A+KF+RWV EVLP++R+ G Y+ +
Sbjct: 57 DTPGGKQEVSIINESGLYSVILVSRKPEAKKFKRWVTHEVLPSIRRHGLYATD 109
>gi|229176557|ref|ZP_04303983.1| Antirepressor, phage associated [Bacillus cereus MM3]
gi|228606913|gb|EEK64309.1| Antirepressor, phage associated [Bacillus cereus MM3]
Length = 256
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKTEGGIQKVRI 68
E ++RT++ + +++WFVAKDVA LGY N+++AI H K P+ + ++
Sbjct: 11 EFGQVRTVI-QGEDVWFVAKDVAEVLGYNNTSKAIQMHVDEDEKADLPIWDGRQNRNQKV 69
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+E +Y L++ S LPSA+KF++WV EVLP++RK G+Y
Sbjct: 70 INESGLYSLILSSKLPSAKKFKKWVTSEVLPSIRKHGAY 108
>gi|329295791|ref|ZP_08253127.1| phage anti-repressor protein [Plautia stali symbiont]
Length = 263
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 5/90 (5%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG---GIQKVRIISEP--DVYRLLVK 80
F A ++A ALGY + ++A+N HCK + K ++TE G + II P DVYRL+++
Sbjct: 32 FFAVELAKALGYNDPHQALNKHCKSLIKLDSVETEEMGLGFKPKGIILTPESDVYRLILR 91
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
S LPSA++ + WV EEVLPTLR+ GSYS++
Sbjct: 92 SKLPSAERVQDWVCEEVLPTLRQQGSYSMK 121
>gi|325478398|gb|EGC81513.1| BRO family, N-terminal domain protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 244
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ T+++K +F+A +VAT LGY N +A+ H KGV K
Sbjct: 2 ISNLKTFENKNFGKLTVIEKGGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 59 WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 109
>gi|291457579|ref|ZP_06596969.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
gi|291380632|gb|EFE88150.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
Length = 259
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG-- 61
I F+F+ +R + D++ WF+AKDV LG ENS +A A K ++G
Sbjct: 5 IQRFDFKGAALRALTDENGEPWFIAKDVCDVLGLENSRKA-TAELDSDEKNTVTISDGIA 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRATSA 119
G IISEP +Y L++KS P A++F+RWV EVLP +RKTG Y + +A A
Sbjct: 64 GNPNKTIISEPGLYCLVMKSRKPEAKEFKRWVTHEVLPQIRKTGGYIPTTDADDDMTILA 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQL 143
V+ + +EE ++ +++ +
Sbjct: 124 KAVMIGQRTMEEQKRRIAAQESHI 147
>gi|257881838|ref|ZP_05661491.1| BRO [Enterococcus faecium 1,231,502]
gi|257817496|gb|EEV44824.1| BRO [Enterococcus faecium 1,231,502]
Length = 258
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 25/210 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLK 58
M+T F FE +++RT+ D+ +FV KDVA LGY+N + IN H V R Y
Sbjct: 1 MNTPQIFNFEQHEVRTVTIHDEP-FFVGKDVAKVLGYQNGSRDINRHVD-VEDRQNYQNG 58
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
T + + II+E +Y L++ S P+A+KF+RWV EVLP +RK G Y + E +
Sbjct: 59 TFESPRGLTIINESGLYSLILGSKQPNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALL 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ T++++ L+E + L Q K+ KI+ +D + L S+D+ +
Sbjct: 119 NPDTIIQLATKLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---V 164
Query: 178 TITQIGER--LNPPQRARFLNKLLLKRGLQ 205
TI+QI ++P Q +NKLL K G+Q
Sbjct: 165 TISQIAADYGMSPQQ----MNKLLHKLGIQ 190
>gi|314948564|ref|ZP_07851944.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
gi|313645061|gb|EFS09641.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
Length = 258
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 25/210 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLK 58
M+T F FE +++RT+ D+ +FV KDVA LGY+N + IN H V R Y
Sbjct: 1 MNTPQIFNFEQHEVRTVTIHDEP-FFVGKDVAKVLGYQNGSRDINRHVD-VEDRQNYQNG 58
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
T + + II+E +Y L++ S P+A+KF+RWV EVLP +RK G Y + E +
Sbjct: 59 TFESPRGLTIINESGLYSLILGSKQPNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALL 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ T++++ L+E + L Q K+ KI+ +D + L S+D+ +
Sbjct: 119 NPDTIIQLATKLKE-ERTGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---V 164
Query: 178 TITQIGER--LNPPQRARFLNKLLLKRGLQ 205
TI+QI ++P Q +NKLL K G+Q
Sbjct: 165 TISQIAADYGMSPQQ----MNKLLHKLGIQ 190
>gi|260556769|ref|ZP_05828987.1| gp30 [Acinetobacter baumannii ATCC 19606]
gi|260410028|gb|EEX03328.1| gp30 [Acinetobacter baumannii ATCC 19606]
Length = 262
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKT 59
M+ I+ F F ++ + D WF DV L + ++ + + KG+A + T
Sbjct: 1 MNAISNFTFHNDYNVRVQLIDAEPWFCLADVCCVLSVDRTSRLLRDLDEKGLADCHT-PT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP--KLRAT 117
GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG Y P K
Sbjct: 60 NGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYEAPKPIEKRNYI 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ + +L + + + A K + + + + +TGV +++HLP
Sbjct: 120 NNNDMLNIKRLIWCCAGHLDQKQS-VSSAIWYSLRNVTGVPSPAKFEVEHLP 170
>gi|307150458|ref|YP_003885842.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306980686|gb|ADN12567.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 230
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE+ +R + D+ W VA+DV T L + +++ + ++T
Sbjct: 1 MSDLIVFGFENQDVRFVGTPDKPEW-VAQDVCTVLEIKRTSDTLRNFDDDEKGTVTIRTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q+ ++EP +YRL+ KS A++F+RW+F EVLP+LR+TGSYS+ K
Sbjct: 60 GGEQEFLTVTEPGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSINQSK 112
>gi|291037232|ref|ZP_06568196.1| hypothetical protein GxylN3_00150 [Gluconacetobacter xylinus NBRC
3288]
Length = 246
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYPLKTEGGIQ 64
P+ F +R++ + WFVA DVA AL YE++ AI VAK + ++TEGG Q
Sbjct: 26 PYAFGGKLVRSVF-INGFTWFVADDVARALDYESARSAIRYLDADEVAKAF-IETEGGPQ 83
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ I+SE +Y L KST A+ F RWV EVLP +R+TGSY
Sbjct: 84 TMLIVSESGIYHLTFKSTKRKAKDFRRWVTHEVLPQIRRTGSY 126
>gi|71276717|ref|ZP_00652985.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900866|ref|ZP_00682982.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162475|gb|EAO12209.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729337|gb|EAO31452.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 264
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN------EAINAHCKGVAKRYP 56
+I PF+F S+ +R ++ +D N WFVAKDV AL Y ++ E I A V +
Sbjct: 4 SIIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAATSNPARVTEHIPAEWVCVNR--- 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G +K ++EP +Y L +S P A F++W+ EVLP++RKTG Y+V P L
Sbjct: 60 IHTNAGERKALCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGEYTVN-PDLEY 118
Query: 117 TSASTVLRVHKHLEEL 132
+ + K +EEL
Sbjct: 119 DQMRSYSKDRKQMEEL 134
>gi|218666564|ref|YP_002425473.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218518777|gb|ACK79363.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 211
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F+F S ++RT VD+D +WF A DVA AL Y ++ + + + ++T GG Q+V
Sbjct: 20 FQFHSTEVRT-VDRDGQVWF-AGDVAKALNYADAVQMTRVLDEDEKGLHTMQTLGGNQQV 77
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++SE +Y L+KS P A+ F RWV EVLP +R+ G+ SV A ++
Sbjct: 78 VVLSESGLYHALLKSRKPEARPFRRWVTAEVLPAIRRNGTSSVAAAQI 125
>gi|326571054|gb|EGE21078.1| BRO family protein [Moraxella catarrhalis BC7]
Length = 279
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 1 MSTITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCK------ 49
MS I+ F FES K +RT + +IWF DVA L S++ + A K
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANVLEISRSSDLLQVAKPAFVKNETSSK 60
Query: 50 -------GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
GV K Y + E G ++V I+EP++YR++ +S A KF+ WVF+EVLPT+R
Sbjct: 61 RGALDPAGVHKMY-ISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIR 119
Query: 103 KTGSY 107
KTG Y
Sbjct: 120 KTGQY 124
>gi|213692400|ref|YP_002322986.1| phage antirepressor protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213523861|gb|ACJ52608.1| phage antirepressor protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320458542|dbj|BAJ69163.1| putative phage antirepressor [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 259
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN--EAINAHCKGVAKRYPL 57
MST I F+F+ +RT+ D+ WFVAKDV LG + ++ E++++ +
Sbjct: 1 MSTEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEG 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T G K IISEP +YRL+++S P A++F+RWV EVLP++R+ G+Y E+ +A
Sbjct: 61 NTRGNPNKT-IISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAV 119
Query: 118 SASTVL 123
+ L
Sbjct: 120 TEPDFL 125
>gi|315612382|ref|ZP_07887295.1| phage antirepressor protein [Streptococcus sanguinis ATCC 49296]
gi|315315363|gb|EFU63402.1| phage antirepressor protein [Streptococcus sanguinis ATCC 49296]
Length = 236
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQK 65
F F ++RT+ D WFV KDVA LGY + AI H + A + + T GG Q
Sbjct: 5 FNFHGQEVRTLT-IDGEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPTSGGTQD 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 MLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 105
>gi|189427129|ref|YP_001949805.1| putative anti-repressor protein [Staphylococcus phage phiMR25]
gi|189339040|dbj|BAG48104.1| putative anti-repressor protein [Staphylococcus phage phiMR25]
Length = 255
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ ++ +FV KDVA LGY+N + INAH K Y + T
Sbjct: 1 MQALQTFNFEELPVRTLT-VNEEPYFVGKDVADILGYKNGSRDINAHVDAEDKLTYQIST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + II+E +Y L+ S L SA++F+RWV +VLP +RK G Y+ +
Sbjct: 60 AGQRRNQTIINESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATD 110
>gi|209560008|ref|YP_002286480.1| Antirepressor [Streptococcus pyogenes NZ131]
gi|209541209|gb|ACI61785.1| Antirepressor [Streptococcus pyogenes NZ131]
Length = 253
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F F+ ++RT V D +FV KDVA LGY NS +A++ H K + T G ++
Sbjct: 5 FNFKGQEVRT-VTIDNEPYFVGKDVADILGYSNSRDALSKHVDTEDKLTSQIATAGQMRN 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
II+E +Y L++ S LP A++F+RWV EVLP +RK G+Y
Sbjct: 64 QTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGAY 105
>gi|66396351|ref|YP_240708.1| ORF019 [Staphylococcus phage 88]
gi|62636766|gb|AAX91877.1| ORF019 [Staphylococcus phage 88]
Length = 254
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ ++ +FV KDVA LGY+N + INAH K Y + T
Sbjct: 1 MQALQTFNFEELPVRTLT-VNEEPYFVGKDVADILGYKNGSRDINAHVDAEDKLTYQIST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + II+E +Y L+ S L SA++F+RWV +VLP +RK G Y+ +
Sbjct: 60 AGQRRNQTIINESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATD 110
>gi|320352352|ref|YP_004193691.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120854|gb|ADW16400.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 263
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ PF+FESN+IR + D + WFVA+DV L Y ++++A + G
Sbjct: 11 VIPFQFESNEIRALT-IDGDPWFVARDVCDVLEYADASDATQFLDDDEKLVRQIAGAGQT 69
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + IISE +Y L+++S P A+ F +WV EVLP++RKTG Y++
Sbjct: 70 RNMLIISESGLYTLIIRSNKPQAKPFRKWVTAEVLPSIRKTGGYAL 115
>gi|307153658|ref|YP_003889042.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306983886|gb|ADN15767.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 216
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS +T F FE ++R + D+ W +A+DV LG E + + + + T
Sbjct: 1 MSNLTIFTFEEQQVRFVGTADKPEW-IAQDVCNVLGIEEPSSVLRNFDPDEKGVHLMHTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
GG Q + ++E +YRL+ +S P A+KF+RW+ +EV+P++R+TGSY+V
Sbjct: 60 GGKQSMLTVTEFGLYRLIFRSNKPIAKKFQRWIIQEVIPSIRRTGSYTV 108
>gi|192291449|ref|YP_001992054.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
gi|192285198|gb|ACF01579.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
Length = 270
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 16/117 (13%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKT 59
T++PF+FE +R +V++ WFVA DVA LGY + + ++ KG+ P+ T
Sbjct: 5 TVSPFQFEGRNVR-LVEQGGETWFVATDVARELGYGLATDLTKHLDVDEKGMC---PVHT 60
Query: 60 EGGIQKVRIISEPDVYRLLVK---------STLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q + +ISEP +YR +V+ + +F+RWVF ++LPTLRK G Y
Sbjct: 61 PGGEQALAVISEPGLYRAIVQRKTNKKHDGALTEKIGRFQRWVFHDILPTLRKHGRY 117
>gi|307592430|ref|YP_003900021.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306986075|gb|ADN17955.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 288
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 7/131 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
+++ F + +N+IR IV D WFVAKDV L + + + A + ++ KG + + T
Sbjct: 6 SLSVFSYGNNQIR-IVLIDGEPWFVAKDVCNVLEHSDVSMACQRLKSYEKGTS---IVCT 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q++ IISE +YRL++ S P A+ F+ WV +EVLP++R+TG Y V+ P+ +A
Sbjct: 62 PGGNQEMAIISESGLYRLVLTSRKPQAEPFQDWVCQEVLPSIRQTGRYEVQPPQPKAQGE 121
Query: 120 STVLRVHKHLE 130
++ + +E
Sbjct: 122 LILMLAQEAVE 132
>gi|150388676|ref|YP_001318725.1| prophage antirepressor [Alkaliphilus metalliredigens QYMF]
gi|149948538|gb|ABR47066.1| prophage antirepressor [Alkaliphilus metalliredigens QYMF]
Length = 276
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGG 62
FE E ++ +D WFV KD+A +LGY+N ++A+ H K +AK T GG
Sbjct: 8 FEKEEFGQVRVLRQDGQPWFVGKDIADSLGYKNPSDALLKHVDEEDKALAK---CDTLGG 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q++ II+E +Y L++ S LP+A++F+RWV EVLP++++ G Y
Sbjct: 65 TQQMTIINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGVY 109
>gi|330985509|gb|EGH83612.1| prophage antirepressor [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 285
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
+S + PF FE+ ++RT++ DQ WFVA DV+ AL Y ++ A+ H K + +T
Sbjct: 8 VSNVIPFRFEAKEVRTLLINDQP-WFVANDVSAALLYSEAS-AMTRHLDDDEKGLSIVQT 65
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q++ +I+E +Y +++S A++F++WV EVLP +RKTG Y A ++
Sbjct: 66 LGGDQEMLVINESGLYSAILRSRKAEAKRFKKWVTGEVLPAIRKTGRYEEPAGRMATLIG 125
Query: 120 STV 122
T+
Sbjct: 126 QTI 128
>gi|291557181|emb|CBL34298.1| Prophage antirepressor [Eubacterium siraeum V10Sc8a]
Length = 262
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQKVRIISEPD 73
++ +D N F A + A LGYE N AI+ HC+ KR +P I+K+ I E D
Sbjct: 19 VIFEDGNPLFPATECAKILGYEKPNNAISRHCRYSLKRGVPHPQSANKTIEKL-FIPEGD 77
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+YRL+++S LP AQ+FE WV + +LP+LRK G+Y
Sbjct: 78 LYRLIMRSKLPEAQEFESWVCDRILPSLRKHGAY 111
>gi|255652573|ref|ZP_05399475.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Query: 25 WFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
WFV KDVA LGY NS +A+ H KGVAK L+ G Q + II+E +Y L++
Sbjct: 28 WFVGKDVAEMLGYSNSRDALKKHIDEEDKGVAKCDTLR---GRQILTIINESGLYSLILS 84
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSY 107
S L A+KF+RWV EVLPT+R+ G+Y
Sbjct: 85 SKLAEAKKFKRWVTNEVLPTIRRHGAY 111
>gi|213967380|ref|ZP_03395528.1| phage protein [Pseudomonas syringae pv. tomato T1]
gi|213927681|gb|EEB61228.1| phage protein [Pseudomonas syringae pv. tomato T1]
Length = 285
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
+S + PF FE+ ++RT++ DQ WFVA DV+ AL Y ++ A+ H K + +T
Sbjct: 8 VSNVIPFRFETKEVRTLLINDQP-WFVANDVSAALLYSEAS-AMTRHLDDDEKGLSIVQT 65
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q++ +I+E +Y +++S A++F++WV EVLP +RKTG Y
Sbjct: 66 LGGDQEMLVINESGLYSAILRSRKAEAKRFKKWVTAEVLPAIRKTGRY 113
>gi|303237921|ref|ZP_07324473.1| BRO family, N-terminal domain protein [Prevotella disiens
FB035-09AN]
gi|302481886|gb|EFL44929.1| BRO family, N-terminal domain protein [Prevotella disiens
FB035-09AN]
Length = 214
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 14/108 (12%)
Query: 9 FESNK----IRT-IVDKDQNIWFVAKDVATALGYENSNEA----INAHCKGVAKRYPLKT 59
F++NK IRT +++K+ WFVAKDV LG +N+ +A ++ KGV Y + T
Sbjct: 15 FDNNKLGVRIRTQVINKEP--WFVAKDVCHVLGIQNARQAMAKTLDEDEKGV---YTIYT 69
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG QK+ +I+E +Y L+ +S P AQ F RWV E+LP++RKTG Y
Sbjct: 70 LGGAQKMNLINESGLYHLIFQSRKPKAQTFRRWVTGEILPSIRKTGRY 117
>gi|317056068|ref|YP_004104535.1| prophage antirepressor [Ruminococcus albus 7]
gi|315448337|gb|ADU21901.1| prophage antirepressor [Ruminococcus albus 7]
Length = 256
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 25 WFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
W V KD+A LGY N ++AI H KGV + T GG Q+ +I+E Y L++
Sbjct: 25 WLVGKDIALMLGYSNPHKAIRDHVDDEDKGVNESV---TPGGRQRTIVINESGFYCLVLS 81
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
S LPSA+K +RWV E+LPT+RKTG Y +A K T
Sbjct: 82 SKLPSAKKIKRWVTSEILPTIRKTGGYVNDADKFVNT 118
>gi|260768856|ref|ZP_05877790.1| phage antirepressor protein [Vibrio furnissii CIP 102972]
gi|260616886|gb|EEX42071.1| phage antirepressor protein [Vibrio furnissii CIP 102972]
Length = 284
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRI 68
+++ + D D WF+ +VA LGY+N +A+ H KGVA T GG Q+V
Sbjct: 36 ELKVVTDVDCQPWFIGGEVAKTLGYKNPRDALAKHVDIEDKGVANH---DTLGGEQEVTT 92
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
I+E +Y L+ S LP A+ F+RWV EVLP++RK G Y+
Sbjct: 93 INESGLYALIFSSKLPKAKAFKRWVTSEVLPSIRKHGGYT 132
>gi|319942313|ref|ZP_08016628.1| hypothetical protein HMPREF9464_01847 [Sutterella wadsworthensis
3_1_45B]
gi|319804186|gb|EFW01086.1| hypothetical protein HMPREF9464_01847 [Sutterella wadsworthensis
3_1_45B]
Length = 326
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
MS + F FE+NK+RT+ + + F+A DV AL + N +A+ + + + ++T
Sbjct: 43 MSDVIAFSFENNKVRTLGTPETPL-FIAADVCAALKHSNPRQALRDNVDPEDQIKVEIET 101
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q V ++E +Y L+ S L +A++F+RWV EVLPT+R+TG Y EAPK
Sbjct: 102 NGGRQTVNAVNESGLYALIFGSKLDTAKRFKRWVTSEVLPTIRRTGRY--EAPK 153
>gi|258543092|ref|YP_003188525.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256634170|dbj|BAI00146.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256637230|dbj|BAI03199.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-03]
gi|256640282|dbj|BAI06244.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-07]
gi|256643339|dbj|BAI09294.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-22]
gi|256646394|dbj|BAI12342.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-26]
gi|256649447|dbj|BAI15388.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-32]
gi|256652433|dbj|BAI18367.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655491|dbj|BAI21418.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-12]
Length = 234
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN---EAINAHCKGVAKRYPL 57
MS I PF FE + +R ++ +D WFV DV L + NS + + + V+ Y
Sbjct: 1 MSNIIPFNFEDHAVR-VITRDGEPWFVLADVCDVLEHTNSRVVADRLEDDERDVSNVY-- 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T GG Q + II+E +Y L+ S P A++F +WV EVLP +RKTGSY++ P +
Sbjct: 58 -TPGGPQDMSIINESGLYNLIFTSRKPEAKRFRKWVTGEVLPAIRKTGSYAL--PTDKQE 114
Query: 118 SASTVLRVHKHLEELAKQAGLKD 140
S RV + L + A K+
Sbjct: 115 WFSRFARVLGMWDTLGESAAEKE 137
>gi|256850685|ref|ZP_05556110.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
gi|256712553|gb|EEU27549.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
Length = 294
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + F+FE+ +R I+ + WFV KD+ LGY + IN+H K + ++T
Sbjct: 1 MNDLEFFDFENQPVR-ILKIENEPWFVGKDLTNILGYTHGARDINSHVADEDKLKSQIRT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRATS 118
G +++ +++E +Y L++ S +P+A+KF+ WV EVLPT+RK G+Y E + T
Sbjct: 60 AGQMREQILVNESGLYSLILSSKMPNAKKFKHWVTHEVLPTIRKHGAYMTDEKIEEVLTD 119
Query: 119 ASTVLRVHKHLEELAKQ 135
T++++ L++ +Q
Sbjct: 120 PDTIIKLATQLKDERQQ 136
>gi|301168933|emb|CBW28528.1| putative antirepressor protein encoded by prophage cp-933n
(putative antirepressor protein) [Haemophilus influenzae
10810]
Length = 289
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLK 58
S ++ F FES IRT+ ++ WFVAKDV A+G +N+ +A+ A KGV Y L
Sbjct: 5 SQLSTFNFESKSIRTLAINNEP-WFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTL- 62
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
GG Q++ IISE +Y L++ K ++P +F +WV EVLPT+RKTG Y +
Sbjct: 63 --GGQQEMNIISESGMYTLILRCRDAVKKGSIP--HRFRKWVTAEVLPTIRKTGKYESK- 117
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
TS + + + L + GL + + + V+ +E + ++ LP +
Sbjct: 118 -----TSVNDRTGLRNAVNMLVSKKGL----IYSDAYHLIHQRFNVESIEDLTLEQLPQA 168
Query: 172 DNDEYLT-ITQIGERLNPPQRARFLNKLLLKRGLQ 205
EY+ I GE + P++ N +R LQ
Sbjct: 169 --VEYVHRIVLEGELITTPKKDECFNFEFTERELQ 201
>gi|170720501|ref|YP_001748189.1| prophage antirepressor [Pseudomonas putida W619]
gi|169758504|gb|ACA71820.1| prophage antirepressor [Pseudomonas putida W619]
Length = 256
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKT 59
+ PF F ++IR + D WFVAKD+A LGY + + AH +GV + T
Sbjct: 3 LIPFNFNGHEIRVVKDHANEPWFVAKDIADDLGYSWAGTSTIAHVPEQWRGVRS---VLT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q++ ++SE +Y L +S P A + WV EV+P++RKTGSY + T A
Sbjct: 60 PSGNQQMAVLSEQGLYFFLGRSDKPGALPLQMWVAGEVIPSIRKTGSY-----QRPMTPA 114
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+L + + L +Q + Q+ L+ R + T ++Q+ +D +PS + TI
Sbjct: 115 EQLLAQAQTMVTLERQQA--EQQVALE--RVEDRTTKLEQVRYLD--SVPSG----FETI 164
Query: 180 TQIGERLN 187
T I +R+N
Sbjct: 165 TTIRDRIN 172
>gi|320540203|ref|ZP_08039858.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
gi|320029869|gb|EFW11893.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
Length = 254
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 8/117 (6%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAK----RYP-LKTEGGIQKVRIISEPDVYRLLVK 80
F A +VA ALGYE +A+ HCK + K P L E V +++EPD+YRL+++
Sbjct: 32 FFAVEVAKALGYERPQDALAKHCKSLIKINFGEMPKLGLEPKPTGVILLTEPDLYRLILR 91
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQA 136
S LPSA+K + WV EEVLP++R+TG Y + PK S S LR+ L E +A
Sbjct: 92 SKLPSAEKVQDWVCEEVLPSIRQTGGYQL--PKQPVPQSLSEALRLAADLAEQRDEA 146
>gi|167769194|ref|ZP_02441247.1| hypothetical protein ANACOL_00517 [Anaerotruncus colihominis DSM
17241]
gi|167668834|gb|EDS12964.1| hypothetical protein ANACOL_00517 [Anaerotruncus colihominis DSM
17241]
Length = 241
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK--------TEGGIQKVRIISEPDV 74
+F A A LGY N+ +AI HCK GV KR + T +++ I+E ++
Sbjct: 25 YFPATACAKMLGYGNARDAIKRHCKEEGVVKRDGVSQTTNQHGVTTCQTVEMKFINEGNL 84
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
YRL+V S LP+A++FE+WVF+EVLP +RKTG Y
Sbjct: 85 YRLIVHSKLPAAERFEKWVFDEVLPAIRKTGGY 117
>gi|160946092|ref|ZP_02093306.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
gi|158447824|gb|EDP24819.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
Length = 255
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F+ N++RTI+ KD WFVAKDV L N A+ ++ L +
Sbjct: 1 MNQLKVFGFKQNEVRTIL-KDGEPWFVAKDVCEILEITNPTMALQRLDDDERAKFNLGRQ 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + I++EP +Y L++ S P A++F+RW+ EV+P +RKTGSYS+
Sbjct: 60 G---ETNIVNEPGLYTLILGSRKPEAKEFKRWITHEVIPAIRKTGSYSIMDS---YAIDD 113
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ R + +EE ++ LK L+L +VN K + D + N L+
Sbjct: 114 PIERAKRWIEEEQERQKLKTENLVLTQQVNELQPKASYYDLI----------LQNKSLLS 163
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQ 205
IT+I + A LNK L + G+Q
Sbjct: 164 ITKIAKDYGMSGMA--LNKKLHELGVQ 188
>gi|167462755|ref|ZP_02327844.1| putative phage antirepressor protein [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 264
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R +V KD + W+VAKDV+ LG+ +++ ++T
Sbjct: 14 MNQLQVFNFTGKDVRVVV-KDGHPWWVAKDVSELLGFRMASDFTRTLDDDEKDTQIVRTP 72
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
GG Q+V II+E +Y ++KS P A++F+RWV EVLP +RKTG Y+ +
Sbjct: 73 GGNQEVTIINESGLYSAILKSRKPEAKQFKRWVTHEVLPAIRKTGMYATD 122
>gi|238855028|ref|ZP_04645357.1| prophage antirepressor [Lactobacillus jensenii 269-3]
gi|282934068|ref|ZP_06339348.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|313472087|ref|ZP_07812579.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 1153]
gi|238832399|gb|EEQ24707.1| prophage antirepressor [Lactobacillus jensenii 269-3]
gi|281301870|gb|EFA94134.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|313449066|gb|EFR61324.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 1153]
Length = 283
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ + F F +RT++ D +FV KDVA LGY N+ +A+ H K+ +
Sbjct: 1 MNNLQIFNFNGLDVRTVL-IDGEPYFVGKDVAEVLGYRNTRDALKKHVDNEDKKSEIVNS 59
Query: 58 ----KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ G Q + +I+E VY L+ S LP+A+KF+ WV EVLP +R+ G+Y +
Sbjct: 60 SQLSQNATGYQNIDLITESGVYSLIFGSKLPTAKKFKHWVTSEVLPAIREHGAYMTDEKA 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQL 143
+ L L++ A Q KD Q+
Sbjct: 120 FDVVNNKAGLA--DLLQQAADQLKQKDIQI 147
>gi|321157186|emb|CBW39171.1| Phage antirepressor protein [Streptococcus phage 11865]
Length = 245
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F F ++RT++ D+ WFV KD+A LGY NS +A+ H K + T G ++
Sbjct: 14 FNFHGQEVRTVMFDDEP-WFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIATAGQMRN 72
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+I+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 73 QTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 114
>gi|307126200|ref|YP_003878231.1| gp15 [Streptococcus pneumoniae 670-6B]
gi|306483262|gb|ADM90131.1| gp15 [Streptococcus pneumoniae 670-6B]
Length = 236
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F F ++RT++ D+ WFV KD+A LGY NS +A+ H K + T G ++
Sbjct: 5 FNFHGQEVRTVMFDDEP-WFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIATAGQMRN 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+I+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 QTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 105
>gi|218665269|ref|YP_002425545.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517482|gb|ACK78068.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 313
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 123/310 (39%), Gaps = 77/310 (24%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN--------------A 46
M + PFE+E IR I ++ W+VA DV ALG +++ A+
Sbjct: 1 MQNVIPFEYEGRDIRVIPGENGEPWWVAVDVCRALGLVDASVAMRKLDEDEKTTLCLTPG 60
Query: 47 HCK-GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
H K G++ P + + +++EP +YRL++ S P A F+RWV EVLP +RKTG
Sbjct: 61 HVKQGLSDNAPGTS------LNLVNEPGLYRLILTSRKPEAHAFKRWVTHEVLPMIRKTG 114
Query: 106 SY--SVEAPK---LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV--- 157
Y S PK V R+H + +AK + + + V + GV
Sbjct: 115 KYETSPAQPKYARFADVDWPAVARMHAAYKRVAKSRKIPVAAQVTVADLAVELLIGVPLR 174
Query: 158 ----DQLEAMDIKHLPSSD------NDEYLTITQIGE---RLNPPQRARF---------- 194
D + + P++D E++ I I E RL+P
Sbjct: 175 AIISDAIAQLGDLTEPTTDVRTKAGPSEHVAIDSIQETDVRLSPEATLNVSDLGALLGGY 234
Query: 195 ----LNKLLLKRGLQVSKVSGG---YRPTPKG---------EERGGKMCDVPMQHVEGST 238
N+LL G QV G + PT KG GG+ DVP
Sbjct: 235 TGIAFNRLLYGLGYQVRHTIRGKSEWHPTEKGTPFAVKIFVPRTGGRGADVP-------- 286
Query: 239 QQLKWNSNLL 248
QL W + +L
Sbjct: 287 -QLLWKAGIL 295
>gi|321157137|emb|CBW39123.1| Phage antirepressor protein [Streptococcus phage 23782]
Length = 245
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F F ++RT++ D+ WFV KD+A LGY NS +A+ H K + T G ++
Sbjct: 14 FNFHGQEVRTVMFDDEP-WFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIATAGQMRN 72
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+I+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 73 QTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 114
>gi|196251077|ref|ZP_03149758.1| prophage antirepressor [Geobacillus sp. G11MC16]
gi|196209449|gb|EDY04227.1| prophage antirepressor [Geobacillus sp. G11MC16]
Length = 241
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 7/104 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F + ++RTI+ K+ +WF+AKDV + L +NS +A+ + KGV T GG
Sbjct: 6 FTYGETQVRTII-KNGEVWFIAKDVCSVLDIKNSRDALGRLDEDEKGVV---LTDTLGGK 61
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q++ ++E +Y L+++S P A++F+RWV EVLPT+RKTG Y
Sbjct: 62 QQMLCVNEAGLYNLVLRSRKPEAKQFKRWVTHEVLPTIRKTGGY 105
>gi|50955842|ref|YP_063130.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952324|gb|AAT90025.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 260
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I PF FE +RT++ D WF+ +DV + LG N EA+ + + L +G
Sbjct: 6 IIPFTFEEVNVRTVL-VDGEPWFILRDVLSVLGLSNPTEAVRSLDEDEFSTTELSLDGQR 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ +++EP +Y L+++S A+ F+RWV EVLP +R+TGSYSV
Sbjct: 65 RNYYLVNEPGLYSLILRSRKTEARAFKRWVTHEVLPQIRRTGSYSV 110
>gi|169632805|ref|YP_001706541.1| putative prophage antirepressor [Acinetobacter baumannii SDF]
gi|169151597|emb|CAP00374.1| conserved hypothetical protein; putative prophage antirepressor
[Acinetobacter baumannii]
Length = 268
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
MS ++ F FE N I+ + N WFVAKD+ ALG N +AI + KGVA
Sbjct: 1 MSNLSVFNFEQNSQIRIIMINSNPWFVAKDICDALGLSNHRDAISKLDKDEKGVAL---T 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAP 112
T GG Q++ +I+E +Y L+++S + KF +WV EVLP++RKTG Y EAP
Sbjct: 58 DTLGGQQELSVINESGMYALVMRSRDAMKEGTPQHKFRKWVTSEVLPSIRKTGKY--EAP 115
Query: 113 K 113
K
Sbjct: 116 K 116
>gi|288904646|ref|YP_003429867.1| prophage antirepressor [Streptococcus gallolyticus UCN34]
gi|288731371|emb|CBI12922.1| putative prophage antirepressor [Streptococcus gallolyticus UCN34]
Length = 258
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F F ++RT+ D WFVA DVA LGY N +A++ H K ++ +
Sbjct: 5 FNFHGQEVRTVT-VDNEPWFVANDVANVLGYANQRDALSKHVDDEDKITLTSQNATLENI 63
Query: 67 -----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I+E +Y L++ S LP A+ F+RWV EVLPT+RK G Y+V+
Sbjct: 64 PNRGLSAINESGLYSLILSSKLPQAKDFKRWVTSEVLPTIRKHGMYAVD 112
>gi|308048839|ref|YP_003912405.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
gi|307631029|gb|ADN75331.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
Length = 260
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 18/119 (15%)
Query: 7 FEFESNKIRTIVD-KDQNIWFVAKDVATALGYENSNEAINAHCKG--VAKRYPLKTEGGI 63
F F + IR I D KD +FVAKDVA ALG++ + A+ H V + L E G
Sbjct: 120 FNFNTASIRVIPDFKDGQPYFVAKDVAEALGFDRPSNALKCHTTDAVVVTKRDLSLESGP 179
Query: 64 Q---------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ++ +I E D+YRL+++S LPSAQ F+ WV + VLP +RK G+Y
Sbjct: 180 RYQELSASLFQGIGQYRIALIPESDLYRLVMRSNLPSAQDFQDWVCKTVLPAIRKDGAY 238
>gi|322806605|emb|CBZ04174.1| phage antirepressor protein [Clostridium botulinum H04402 065]
Length = 261
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 1 MSTITPF---EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYP 56
MS + F EF S +RTI K++ IWFV KDVA LGYE +AI K P
Sbjct: 1 MSNLQIFKNQEFGS--VRTIKKKNE-IWFVGKDVAKCLGYERPTKAIQDRVDNEDKDEVP 57
Query: 57 LK-TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
++ + G Q II+E +Y L++ S LP+A+KF+RWV EVLP +RK G Y+
Sbjct: 58 IQDSMGRNQNTPIINESGLYSLVLSSKLPAAKKFKRWVTSEVLPNIRKYGMYA 110
>gi|285002341|ref|YP_003422405.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343601|gb|ACH69416.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 496
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 23/153 (15%)
Query: 31 VATALGYENSNEAINAHCK--------GVAKRYPLKTEGGIQKVRI--------ISEPDV 74
VA LGY+N+ +AI+ H K VA R PL T ++ + ISE V
Sbjct: 34 VAEFLGYKNTRDAIHKHVKPQWKATWETVANRDPLVTSLAQAEIPVNWQPNTVFISEAGV 93
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEE--- 131
Y L+++S LP+A++F+RW+FEEVLP LR++G YS++ + + + + +K+L+E
Sbjct: 94 YALIMRSKLPAAEEFQRWLFEEVLPELRRSGKYSIQDNQQKQQDCNMLNWANKYLQEIIP 153
Query: 132 ----LAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
LA N+L++ TK+ V+Q
Sbjct: 154 LQNQLATIRADHRNELVMCRAEFETKLRDVEQC 186
>gi|62181158|ref|YP_217575.1| hypothetical protein SC2588 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128791|gb|AAX66494.1| hypothetical protein SCH_2588 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715647|gb|EFZ07218.1| hypothetical protein SCA50_2768 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 261
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 2 STITPFEFESNKIRTI-VDKDQ---NIWFVAKDVATALGYENSNEAINAHCKGVAK-RYP 56
S I FEF+S++ + +D + F+A +A ALGY N +A+ HCK + K Y
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 57 LKTEGGI----QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
E G + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 K 113
K
Sbjct: 123 K 123
>gi|294649666|ref|ZP_06727078.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824445|gb|EFF83236.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 141
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+ +T F+F+S+ +R D++ F DV L S++ + V P
Sbjct: 1 MNAVTHFDFKSSSVRIAYDENGEPLFCLADVCKVLNISRSSDLLQIQRGCVKNETPKRHG 60
Query: 57 -----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ T GG Q++ I+EP++YR++ +S P A F+ WVF EVLP++RKTG
Sbjct: 61 ALDPIGVHKISVSTNGGKQELIFINEPNLYRVIFRSNKPEAINFQNWVFAEVLPSIRKTG 120
Query: 106 SYS 108
SYS
Sbjct: 121 SYS 123
>gi|167993641|ref|ZP_02574735.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205328358|gb|EDZ15122.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
Length = 261
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 2 STITPFEFESNKIRTI-VDKDQ---NIWFVAKDVATALGYENSNEAINAHCKGVAK-RYP 56
S I FEF+S++ + +D + F+A +A ALGY N +A+ HCK + K Y
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 57 LKTEGGI----QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
E G + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 K 113
K
Sbjct: 123 K 123
>gi|294674626|ref|YP_003575242.1| putative antirepressor [Prevotella ruminicola 23]
gi|294472209|gb|ADE81598.1| putative antirepressor [Prevotella ruminicola 23]
Length = 232
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---VAKRYPLKTEGGIQKVRII 69
+IRT +Q I FVAKDVATALGY N+ +AI H + +R+ L G ++ V II
Sbjct: 15 EIRTCQVNNQ-IMFVAKDVATALGYTNTPKAIRDHIDDDDKLTERFVL--SGQVRSVIII 71
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATSASTVL 123
+E +Y L++ S LP A+ F+ WV EVLP +R+TG Y A R SA +L
Sbjct: 72 NESGLYALILSSKLPQAKAFKHWVTSEVLPQIRQTGGYIPTRAADGRDLSAVEIL 126
>gi|224582866|ref|YP_002636664.1| hypothetical protein SPC_1057 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224467393|gb|ACN45223.1| hypothetical protein SPC_1057 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 261
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 2 STITPFEFESNKIRTI-VDKDQ---NIWFVAKDVATALGYENSNEAINAHCKGVAK-RYP 56
S I FEF+S++ + +D + F+A +A ALGY N +A+ HCK + K Y
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 57 LKTEGGI----QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
E G + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 K 113
K
Sbjct: 123 K 123
>gi|225855765|ref|YP_002737276.1| gp15 [Streptococcus pneumoniae P1031]
gi|225725028|gb|ACO20880.1| gp15 [Streptococcus pneumoniae P1031]
Length = 237
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT++ D+ WFV KDVA LGY + AI H K+ G +Q
Sbjct: 5 FNFHGQEVRTLIIDDEP-WFVGKDVADILGYSKARNAIALHVDEDDALKQGLTDNLGRVQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 ETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|307243557|ref|ZP_07525704.1| toxin-antitoxin system, toxin component, Bro family
[Peptostreptococcus stomatis DSM 17678]
gi|306493057|gb|EFM65063.1| toxin-antitoxin system, toxin component, Bro family
[Peptostreptococcus stomatis DSM 17678]
Length = 240
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG--GIQKVR 67
E ++R+++ ++NIWFV KDVA LGY N+ +AI H K +G G
Sbjct: 12 EFGEVRSVI-IEENIWFVGKDVAQILGYSNTRKAIIDHIDEDDKNTVTIRDGIKGNPNQV 70
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
II+E +Y L++ S LP+A+KF+RWV EVLP +RK G Y
Sbjct: 71 IINESGLYSLILSSKLPNAKKFKRWVTSEVLPAIRKQGFY 110
>gi|66395745|ref|YP_240116.1| ORF016 [Staphylococcus phage 37]
gi|62636168|gb|AAX91279.1| ORF016 [Staphylococcus phage 37]
Length = 257
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQK 65
+F +I TI +K+ +F A VA LGY N +AI+ H K GV K + + G Q
Sbjct: 11 QFGDLEILTIDNKE---YFPAIKVAEILGYTNPRDAISRHTKKRGVVKHDVIDSLGRKQV 67
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ I E ++YRL+ +S LP A++FE W+F+EVLP +RK G Y+ ++
Sbjct: 68 KKFIDEGNLYRLISRSKLPQAEQFEEWIFDEVLPAIRKHGIYATDS 113
>gi|313618470|gb|EFR90474.1| toxin-antitoxin system, toxin component, Bro family [Listeria
innocua FSL S4-378]
Length = 259
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 12/108 (11%)
Query: 25 WFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
+FV KDVA+ LGY NS +A+ H KGV K T GG Q + II+E +Y L++
Sbjct: 24 YFVGKDVASILGYSNSRKALIDHVDEEDKGVTK---CDTLGGKQDLIIINESGLYCLILS 80
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLR 124
S +P+A+KF+RWV EVLP +RK G Y + P L A +A T L+
Sbjct: 81 SKMPNAKKFKRWVTSEVLPAIRKHGLYVTDDLIANPDL-AIAAFTALK 127
>gi|38232815|ref|NP_938582.1| putative anti-repressor protein [Corynebacterium diphtheriae NCTC
13129]
gi|38199073|emb|CAE48694.1| Putative anti-repressor protein [Corynebacterium diphtheriae]
Length = 272
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKTE 60
+ PF F + +R +V ++ +V +DV L +NS +A I+ G+A T
Sbjct: 3 LKPFNFRGHNVRVLVAENGEPLWVGRDVCAVLEIKNSRDALSRIDPEGVGIADTL---TP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
GGIQK+++++E +Y LL +S +P A++F RWV EVLP +R+ G Y+ A
Sbjct: 60 GGIQKLKVVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHGMYATTA 110
>gi|329113875|ref|ZP_08242646.1| Hypothetical protein APO_0652 [Acetobacter pomorum DM001]
gi|326696885|gb|EGE48555.1| Hypothetical protein APO_0652 [Acetobacter pomorum DM001]
Length = 236
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F+FE + +RTI ++D W+V D+ L + ++A + R + T GG Q++
Sbjct: 10 FDFEGHAVRTI-NRDGEPWWVLVDLCAVLELGSPHKAADRLDDDEKGRTIIPTLGGPQEM 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
+I+E ++ L++ S P+A++F++WV VLP+LR+TGS+SVEA L + +A VL
Sbjct: 69 TVINESGLFSLILTSRKPAAKRFKKWVTAVVLPSLRRTGSFSVEAAILASQNAVKVL 125
>gi|295100755|emb|CBK98300.1| Prophage antirepressor [Faecalibacterium prausnitzii L2-6]
Length = 229
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG------- 62
E ++RT V+ + W V KDVA ALGY+N +AI AH KR+ + ++G
Sbjct: 11 EFGQVRT-VELNGQPWLVGKDVAEALGYKNPGKAIIAHVDEEDKRFEMLSQGADSQNGNV 69
Query: 63 --IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
K+ +I+E +Y L++ S +P A+ F+ WV EVLP LRK G Y
Sbjct: 70 SPSSKIALINESGLYSLILSSKMPKAKAFKHWVTSEVLPALRKNGVYE------------ 117
Query: 121 TVLRVHKHLEEL 132
++ +H+E+L
Sbjct: 118 -TVKAQQHIEQL 128
>gi|145636030|ref|ZP_01791706.1| putative antirepressor protein [Haemophilus influenzae PittAA]
gi|145266718|gb|EDK06746.1| putative antirepressor protein [Haemophilus influenzae PittAA]
Length = 149
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE---AINAHCKGVAKRYPLKTE 60
++ F FESN IRT+ ++ WFVAKDV A+G NS A++ KGV+ Y T
Sbjct: 7 LSTFNFESNSIRTLAINNEP-WFVAKDVCDAIGLTNSRISLIALDEDEKGVSLIY---TP 62
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q+V IISE +Y L++ K ++P +F +WV EVLPT+RKTG Y
Sbjct: 63 SGQQEVNIISESGMYTLILRCRDAVKKGSIP--HRFRKWVTAEVLPTIRKTGKY 114
>gi|224282988|ref|ZP_03646310.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313140143|ref|ZP_07802336.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313132653|gb|EFR50270.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
Length = 260
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I F+F +RT+ DK WFVAKDV LG+ N + A++ ++ L +G
Sbjct: 5 IQRFDFRGALLRTLTDKAGEPWFVAKDVCDILGHSNVSMALDRLDDDERSKFNLGRQG-- 62
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
+ I++E +Y L++ S P A +F+RWV EVLP++R+TG Y P A T+L
Sbjct: 63 -ETNIVNEAGLYVLVLGSRKPEAHEFKRWVTHEVLPSIRRTGGY---IPTTDADDDMTIL 118
>gi|256833346|ref|YP_003162073.1| phage antirepressor protein [Jonesia denitrificans DSM 20603]
gi|256686877|gb|ACV09770.1| phage antirepressor protein [Jonesia denitrificans DSM 20603]
Length = 244
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 6/137 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKT 59
M+++ PF + + +IRTI+ D+ F+ +D+ AL S+ A+ + KGV Y T
Sbjct: 1 MTSLQPFVYGTQEIRTIMVNDEPA-FITRDLLEALDLNRSSIALLDDDEKGVHTVY---T 56
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG+Q++ ++E +Y L++KS P A+ F+RW+ EVLP +R+TG Y++ AP+ A +
Sbjct: 57 PGGMQEMGYVTEAGMYSLVLKSRKPEAKAFKRWITHEVLPQIRRTGGYTM-APRSYAEAL 115
Query: 120 STVLRVHKHLEELAKQA 136
+ V + E L +A
Sbjct: 116 RALADVEERKELLESEA 132
>gi|256851403|ref|ZP_05556792.1| prophage antirepressor [Lactobacillus jensenii 27-2-CHN]
gi|260660825|ref|ZP_05861740.1| prophage antirepressor [Lactobacillus jensenii 115-3-CHN]
gi|282933147|ref|ZP_06338534.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|256616465|gb|EEU21653.1| prophage antirepressor [Lactobacillus jensenii 27-2-CHN]
gi|260548547|gb|EEX24522.1| prophage antirepressor [Lactobacillus jensenii 115-3-CHN]
gi|281302651|gb|EFA94866.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
Length = 258
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------GVAKR 54
M+ + F F IRT+ D +FV KDVA LGY+NS + + H GVA R
Sbjct: 1 MTDLQIFNFNGTDIRTLT-IDNEPYFVGKDVAKVLGYKNSRDTLMKHVDEEDKKDGVAIR 59
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ G Q I+E +Y L++ S LP+A+KF+ WV EVLP +RK G Y
Sbjct: 60 DSI---GRNQSAVAINESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGGY 109
>gi|325849035|ref|ZP_08170527.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480280|gb|EGC83343.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 260
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-IQKVRI 68
E KIR I+D++ WFV KDVA L Y N + I H + ++ + +G +++ +
Sbjct: 11 EFGKIRIILDENNEPWFVGKDVAEILEYRNGSRDIKRHVDELDRKKEMVHDGNQLKETIL 70
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I+E +Y L+ S + A++F+RWV EVLPT+RK G+Y +
Sbjct: 71 INESGLYSLIFSSKMDKAREFKRWVTSEVLPTIRKHGAYMTD 112
>gi|322376768|ref|ZP_08051261.1| toxin-antitoxin system, toxin component, Bro family [Streptococcus
sp. M334]
gi|321282575|gb|EFX59582.1| toxin-antitoxin system, toxin component, Bro family [Streptococcus
sp. M334]
Length = 329
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT+ D+ WFV KDVA LGY + AI H K+ G +Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEDDALKQGLTDNLGRVQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 ETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|145642113|ref|ZP_01797683.1| possible prophage antirepressor [Haemophilus influenzae R3021]
gi|145273192|gb|EDK13068.1| possible prophage antirepressor [Haemophilus influenzae 22.4-21]
Length = 210
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE-NSNEAINAHCKGVAKRYPLKTE 60
+ I+ F F+SN IR V ++ +F KDV AL + S E + +GV + + T
Sbjct: 3 TQISTFNFKSNSIRIEVINNEP-FFALKDVCDALAIKVASPERFRLNFEGVTRNV-IPTS 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G Q++ I+EP++YR++ +S A +F+ W+FEEVLP +RKTG Y + P L
Sbjct: 61 SGNQELTFINEPNLYRIIFRSNKAEAIEFQNWIFEEVLPQIRKTGKYEISQPAL 114
>gi|227535711|ref|ZP_03965760.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227186678|gb|EEI66745.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 254
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT V + IWF A DV AL N+ A+ + ++ L
Sbjct: 1 MNELQLFQFEDNQIRT-VSSNGIIWFSAPDVTNALKLTNTTVALKSLDGDEVTKFNL--- 56
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG+ + ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y
Sbjct: 57 GGLSGETNFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAY 104
>gi|48697283|ref|YP_025050.1| putative antirepressor protein [Lactobacillus phage phiAT3]
gi|47607174|gb|AAT36510.1| putative antirepressor protein [Lactobacillus phage phiAT3]
Length = 254
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT V + IWF A DV AL N+ A+ + ++ L
Sbjct: 1 MNELQLFQFEDNQIRT-VSSNGIIWFSAPDVTNALKLTNTTVALKSLDGDEVTKFNL--- 56
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG+ + ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y
Sbjct: 57 GGLSGETNFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAY 104
>gi|168490127|ref|ZP_02714326.1| gp15 [Streptococcus pneumoniae SP195]
gi|183571458|gb|EDT91986.1| gp15 [Streptococcus pneumoniae SP195]
Length = 237
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT+ D+ WFV KDVA LGY + AI H K+ G +Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEDDALKQGLTDNLGRVQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 ETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|258515114|ref|YP_003191336.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
gi|257778819|gb|ACV62713.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
Length = 272
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQK 65
F +E ++RT++ + WF AKDV L NS A + + + L G ++
Sbjct: 13 FNYEGQQVRTVLINGEP-WFAAKDVCDILEISNSRHATSRLPERMKDTVVLSDAVGRTKE 71
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ IISEP +Y+L+V+S P A+KF WV EEVLP++RKTG+YS
Sbjct: 72 MTIISEPGLYKLVVRSDKPEAEKFTDWVVEEVLPSIRKTGTYS 114
>gi|168494934|ref|ZP_02719077.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575159|gb|EDT95687.1| gp15 [Streptococcus pneumoniae CDC3059-06]
Length = 237
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT+ D+ WFV KDVA LGY + AI H K+ G +Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEDDALKQGLTDNLGRVQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 ETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|317486781|ref|ZP_07945597.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316921944|gb|EFV43214.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 258
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 13/167 (7%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + FE E K+R +V++D WFVAKDV L + ++ I+ ++T
Sbjct: 1 MSEMQIFEKAEFGKVR-VVERDGQPWFVAKDVCECLELTDVSKTISLLDDDEKGTNSIRT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLR 115
GG Q++ ++SEP +Y L+++S P A+ F+RWV +V+P++RK G Y+ VEA
Sbjct: 60 PGGEQQMLVVSEPGLYSLILRSRKPEAKAFKRWVTHDVIPSIRKRGLYATPQTVEAMLAD 119
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+A +L K EE AK A L KV + K+ D + A
Sbjct: 120 PDTAIKLLTSLK--EERAKSAALA-----AKVEQDAPKVLFADSVAA 159
>gi|183603712|ref|ZP_02964456.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183603728|ref|ZP_02964463.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183603747|ref|ZP_02964470.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575125|gb|EDT95653.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575245|gb|EDT95773.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575276|gb|EDT95804.1| gp15 [Streptococcus pneumoniae CDC3059-06]
Length = 252
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT+ D+ WFV KDVA LGY + AI H K+ G +Q
Sbjct: 20 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYSKARNAIALHVDEDDALKQGLTDNLGRVQ 78
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 79 ETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 121
>gi|209552444|ref|YP_002284359.1| hypothetical protein PAJU2_gp25 [Pseudomonas phage PAJU2]
gi|209528717|dbj|BAG75009.1| hypothetical protein [Pseudomonas phage PAJU2]
Length = 286
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLK 58
+ + PF+F++ ++RT++ DQ WFVA DVA +LGY + + ++ KG+ +
Sbjct: 4 AKVIPFQFDAREVRTMLIDDQP-WFVATDVAASLGYPAAPQMTRNLDEDEKGMQN---VH 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q++ +I+E +Y +++S A++F++WV EVLP +RK G Y + K+
Sbjct: 60 TPGGDQEMLVINESGLYSAILRSRKAEAKRFKKWVTAEVLPAIRKHGRYEDSSNKMATLV 119
Query: 119 ASTV 122
T+
Sbjct: 120 GETI 123
>gi|169346810|ref|ZP_02865761.1| phage antirepressor protein [Clostridium perfringens C str.
JGS1495]
gi|169297092|gb|EDS79214.1| phage antirepressor protein [Clostridium perfringens C str.
JGS1495]
Length = 256
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------YPLKTEGGI 63
E +IRT+ +++ W V KD+ LGY NS++A+ H K+ YP + G
Sbjct: 12 EFGQIRTLFIENEG-WLVGKDITDILGYSNSSDALKNHVDEDDKKKIAFSDYP---QFGN 67
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTV 122
+ +I+E +Y L+++S LP A+KF+RWV EVLP++R G+Y E +A TS +
Sbjct: 68 KGAVLINESGLYSLILRSNLPKAKKFKRWVTSEVLPSIRNYGAYMTENTLEKALTSPDFL 127
Query: 123 LRVHKHLEE 131
+++ +L+E
Sbjct: 128 IQLATNLKE 136
>gi|15320633|ref|NP_203477.1| hypothetical protein Mx8p63 [Myxococcus phage Mx8]
gi|15281743|gb|AAK94398.1|AF396866_63 p63 [Myxococcus phage Mx8]
Length = 245
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 6 PFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
PF FE S +IR +VD+ WFVA+D+A AL Y +++ + + ++T G +
Sbjct: 13 PFLFEGSTRIRVVVDEAGEPWFVAQDIAHALEYRMASDLTRLLKPHHLRTHAVRTNRGER 72
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
IISEP +YR + S A+ F+ WV +VL ++RKTG+Y V +R A L
Sbjct: 73 SATIISEPAMYRAVFLSKSKKAEPFQEWVTSDVLRSIRKTGAYGVPMAAIRQAVAERFLG 132
Query: 125 V 125
V
Sbjct: 133 V 133
>gi|126642079|ref|YP_001085063.1| hypothetical protein A1S_2034 [Acinetobacter baumannii ATCC 17978]
Length = 220
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
KG+A + T GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG Y
Sbjct: 4 KGLADCH-TPTNGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYE 62
Query: 109 VEAP--KLRATSASTVLRVHKHLEELAKQAGLKD--NQLLLKVNRGVTKITGVDQLEAMD 164
P K + S + + + + A G K NQ + R V TGV +
Sbjct: 63 APKPVEKRNYLNNSDMNNIKRLIWTCADHFGHKGSFNQAIWACLRDV---TGVPSPAKFE 119
Query: 165 IKHLP 169
++HLP
Sbjct: 120 VEHLP 124
>gi|66396424|ref|YP_240782.1| ORF018 [Staphylococcus phage 92]
gi|62636838|gb|AAX91949.1| ORF018 [Staphylococcus phage 92]
Length = 245
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y V +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSEVLPTLRKTGAYQVPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ N I ++ N QR+ + +V K++G
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 203
>gi|296277289|ref|ZP_06859796.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
MR1]
Length = 246
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 6 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 64
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y + +
Sbjct: 65 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQIPS 124
Query: 112 PKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 125 DPMQA------LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 169
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ N I ++ N QR+ + +V K++G
Sbjct: 170 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 208
>gi|238898668|ref|YP_002924349.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|238899089|ref|YP_002924771.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466427|gb|ACQ68201.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466849|gb|ACQ68623.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 263
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAK---RYPLKTEGGIQKVRIISEP--DVYRLLVK 80
F A ++A ALGY+N +EA+ +CK + K L+ G + II P D+YRL++K
Sbjct: 32 FFAVELAKALGYKNPHEALQDNCKLLIKLNSSQTLELNLGFKPKGIILAPESDLYRLILK 91
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSV 109
S LPSA++ + WV EEVLPTLR+ GSYS+
Sbjct: 92 SKLPSAERVQDWVCEEVLPTLRQQGSYSM 120
>gi|329121988|ref|ZP_08250598.1| phage antirepressor protein [Dialister micraerophilus DSM 19965]
gi|327467169|gb|EGF12677.1| phage antirepressor protein [Dialister micraerophilus DSM 19965]
Length = 109
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
+S + FE ++ + T+++KD +F+A +V T LGY N +A+ H K V K
Sbjct: 2 ISNLKTFENKNFEKLTVIEKDSEFFFIANEVVTMLGYVNPRKAVYDHVDEEDKDVTK--- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
T GGIQ + II+E +Y L+ S LP A+ F+ WV EVLP++RK
Sbjct: 59 WNTPGGIQNISIINESGLYSLIFSSKLPQAKIFKVWVIREVLPSIRK 105
>gi|319411146|emb|CBY91551.1| Uncharacterized protein HI1418 [Neisseria meningitidis WUE 2594]
Length = 280
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F N I+ +++K+ WF+A +VA LGY +S + + T
Sbjct: 1 MNQVQYFNFNQNAIQ-VINKNGEAWFIASEVAAMLGYRDSYNMTRILDNDEKGTHNVSTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
GG Q V +I+E Y KS P + F +WV EVLPT+RKTG Y +
Sbjct: 60 GGNQDVSVINESGFYHAAFKSRKPEVKPFRKWVTSEVLPTIRKTGGYQI 108
>gi|57505941|ref|ZP_00371865.1| putative antirepressor [Campylobacter upsaliensis RM3195]
gi|57015741|gb|EAL52531.1| putative antirepressor [Campylobacter upsaliensis RM3195]
Length = 281
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRY---PLKTEGG 62
F+ E K+R I ++ F KD+ +L +N+ + NA K A R P +T+G
Sbjct: 20 FQREEKKLRIIKNESGEPLFCLKDICDSLEIQNNADIKNAILKEFEAPRLNLAPFQTQGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
IQ +I+EP +Y +L++S P A++F +WV EVLP++RK +Y +E
Sbjct: 80 IQHFTMITEPQLYFMLMRSDKPKAREFRQWVINEVLPSIRKNRAYRLE-----FGLNDKA 134
Query: 123 LRVHKHLEELAKQAGLKD 140
R+ K L+++ K + LKD
Sbjct: 135 FRLEKELDKMKKVSKLKD 152
>gi|317487091|ref|ZP_07945898.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921663|gb|EFV42942.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 231
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKTEGGIQKV 66
E KIR +V+ WFV KDV L NS +A ++ KGVA + T GG Q++
Sbjct: 11 EFGKIR-VVEHSGTPWFVGKDVCDCLEIGNSRDAAASLDDDEKGVA---LIDTPGGKQEM 66
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
IISEP +Y L+++S P A+ F+RW+ EVLP +RK G Y
Sbjct: 67 SIISEPGLYFLVLRSRKPEAKAFKRWIVHEVLPAIRKHGGY 107
>gi|311064272|ref|YP_003970997.1| phage antirepressor protein [Bifidobacterium bifidum PRL2010]
gi|310866591|gb|ADP35960.1| phage antirepressor protein [Bifidobacterium bifidum PRL2010]
Length = 264
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 24/131 (18%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN--EAI---------NAHCKGVA 52
I F+F +RT+ D+ WFVAKD LG + ++ EA+ N+
Sbjct: 5 IQRFDFRGASLRTLTDEAGEPWFVAKDACDILGIDTNHLREALDDDEITNLRNSEVWNQP 64
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
R PL IISEP +Y+L+++S P A++F+RWV EVLP +RKTG Y P
Sbjct: 65 GRAPL----------IISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPAIRKTGGY---IP 111
Query: 113 KLRATSASTVL 123
A T+L
Sbjct: 112 TTDADDDMTIL 122
>gi|292397744|ref|YP_003517810.1| BRO-F [Lymantria xylina MNPV]
gi|291065461|gb|ADD73779.1| BRO-F [Lymantria xylina MNPV]
Length = 249
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI---- 68
+I VD ++N+WF AK++A AL Y N+ ++I + K K I ++ I
Sbjct: 36 EIYIFVDNNKNLWFKAKEIAQALDYNNTKQSIQINVNECDKTEWNKLGYTIDQLEIPSNW 95
Query: 69 ------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
I+E +Y L+++S P AQ F+ WV EVLP+++KTG Y + + +A+S++ V
Sbjct: 96 HPKTIFINESGLYSLILRSKKPEAQHFKHWVTSEVLPSIKKTGKYDMCS---QASSSTEV 152
Query: 123 LRVHKHLEELAKQA---GLKDNQLLLKVNRGVTKI 154
+ K L + QA L + Q++ K + V ++
Sbjct: 153 VNYDKQLADAQIQALRLQLLNTQIIAKYDAQVAEL 187
>gi|325661340|ref|ZP_08149966.1| hypothetical protein HMPREF0490_00699 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472289|gb|EGC75501.1| hypothetical protein HMPREF0490_00699 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 275
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQKVRI 68
E ++RTIV ++ WFV KDVA ALGY N A+ H K ++ G + V +
Sbjct: 29 EFGQVRTIVINNEP-WFVGKDVAEALGYANPKNAVPKHVLDEDKLSTQIEYAGQRRTVTV 87
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA----TSASTVLR 124
I+E +Y L+ S L SA++F+ WV EVLP++RKTG+Y +LR V++
Sbjct: 88 INESGLYALIFGSKLESAKRFKHWVTSEVLPSIRKTGNYISNEDQLRLGLFDKDPLVVVQ 147
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ-LEAMDIKHLPSSDNDEYLTITQIG 183
H+ L + ++V+R + + ++ H + D+ + T I
Sbjct: 148 SHQKL-------------VAIEVDRATAPLIAENTVMKPKADYHDEVLNKDDLINTTVIA 194
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER-GGKMCDVPMQHVEGSTQQLK 242
+ L A+ LN ++ + SG + P E D +VE S LK
Sbjct: 195 KDLGLRSAAK-LNNIMHSNNIIYKNSSGTWCPYADYEWLITENYADYKSYNVENSNPCLK 253
Query: 243 W 243
W
Sbjct: 254 W 254
>gi|168483731|ref|ZP_02708683.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|168484683|ref|ZP_02709635.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|168484796|ref|ZP_02709741.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|169834001|ref|YP_001693458.1| hypothetical protein SPH_0034 [Streptococcus pneumoniae
Hungary19A-6]
gi|307066662|ref|YP_003875628.1| prophage antirepressor [Streptococcus pneumoniae AP200]
gi|168996503|gb|ACA37115.1| gp15 [Streptococcus pneumoniae Hungary19A-6]
gi|172042037|gb|EDT50083.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|172042144|gb|EDT50190.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|172042990|gb|EDT51036.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|306408199|gb|ADM83626.1| Prophage antirepressor [Streptococcus phage PhiSpn_200]
Length = 237
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTE-GGIQ 64
F F ++RT+ D+ WFV KDVA LGY +AI+ H + + +Y L G Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 NTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|301170323|emb|CBW29929.1| unnamed protein product [Haemophilus influenzae 10810]
Length = 209
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS +T F+FE+ ++TIV+ ++ I+F A +A L Y+N ++AI H + KR +
Sbjct: 1 MSNLTIFKFENAPVQTIVENNE-IFFRAAQLAELLQYKNPHKAIKDHVDPDDLTKREVVN 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T +V ++E +Y L++ S L A+K +RWV EVLP +RKTG Y ++ +L
Sbjct: 60 TINKRAQVLFVNESGMYSLVLSSKLEQAKKVKRWVTSEVLPAIRKTGKYQLQPQQL 115
>gi|148998964|ref|ZP_01826398.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP11-BS70]
gi|225857837|ref|YP_002739347.1| gp15 [Streptococcus pneumoniae 70585]
gi|303255434|ref|ZP_07341498.1| hypothetical protein CGSSpBS455_08120 [Streptococcus pneumoniae
BS455]
gi|303259316|ref|ZP_07345294.1| gp15 [Streptococcus pneumoniae SP-BS293]
gi|303261072|ref|ZP_07347021.1| gp15 [Streptococcus pneumoniae SP14-BS292]
gi|303263400|ref|ZP_07349323.1| gp15 [Streptococcus pneumoniae BS397]
gi|303265565|ref|ZP_07351465.1| gp15 [Streptococcus pneumoniae BS457]
gi|303267877|ref|ZP_07353679.1| gp15 [Streptococcus pneumoniae BS458]
gi|147755172|gb|EDK62225.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP11-BS70]
gi|225721476|gb|ACO17330.1| gp15 [Streptococcus pneumoniae 70585]
gi|302597574|gb|EFL64656.1| hypothetical protein CGSSpBS455_08120 [Streptococcus pneumoniae
BS455]
gi|302637909|gb|EFL68395.1| gp15 [Streptococcus pneumoniae SP14-BS292]
gi|302639734|gb|EFL70191.1| gp15 [Streptococcus pneumoniae SP-BS293]
gi|302642573|gb|EFL72918.1| gp15 [Streptococcus pneumoniae BS458]
gi|302645005|gb|EFL75252.1| gp15 [Streptococcus pneumoniae BS457]
gi|302647173|gb|EFL77397.1| gp15 [Streptococcus pneumoniae BS397]
Length = 237
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTE-GGIQ 64
F F ++RT+ D+ WFV KDVA LGY +AI+ H + + +Y L G Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
II+E +Y L++ S LP A++F+RWV EVLP +RK G +
Sbjct: 64 NTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGF 106
>gi|268592716|ref|ZP_06126937.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291311859|gb|EFE52312.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 197
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I+ FE ++R IV + N WFVAKDV AL NS A+ A + + T GG
Sbjct: 31 ISVIRFEDVQVR-IVKINNNPWFVAKDVCDALQLTNSRAALLALDEDEKDVSLIYTLGGN 89
Query: 64 QKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSV 109
QK+ IISE Y+L+ +S + A +F WVF +V+P++RKTG+Y V
Sbjct: 90 QKLNIISESGFYKLIARSRKATTKGTFAHRFTNWVFRDVIPSIRKTGAYGV 140
>gi|211731852|gb|ACJ10151.1| conserved hypothetical protein [Bacteriophage APSE-4]
Length = 255
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 25 WFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF +++ L EN + + KGV K Y T+GG Q + ++EP++YR++ +S
Sbjct: 27 WFCLRNICEVLNIENHRDLMAKQLDKKGVEKIYT-PTKGGNQLLTFVNEPNLYRVIFRSN 85
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL------RATSASTVLRVHKHLEELAKQA 136
P A++F+ WVF +VLP++RKTG Y P+ R T + T R HL
Sbjct: 86 KPEAKQFQDWVFNDVLPSIRKTGKYDHPQPQTQPKAVERFTHSDT--RNLTHLVWCMTNG 143
Query: 137 GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ V + ++TG E I+H+P DE I I E L
Sbjct: 144 FRFEQSWTRAVWLALREVTGTPSPERFQIEHIPLM-ADECRRIYYITETL 192
>gi|304439200|ref|ZP_07399118.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372332|gb|EFM25920.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 277
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 10/110 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL---------KTE 60
E IRT+V + WFV KD+A LGY NS++A+ H + K++ +
Sbjct: 25 EFKDIRTMVMNGEP-WFVGKDIAENLGYSNSSKAVINHVETEDKQFIMLDLADSQNGNVP 83
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G K +I+E +Y L++ S LP A+KF+RWV EVLP++R+ G Y+ +
Sbjct: 84 KGQTKTAVINESGLYSLILSSKLPQAKKFKRWVTSEVLPSIRRHGMYATD 133
>gi|309806834|ref|ZP_07700823.1| phage antirepressor protein [Lactobacillus iners LactinV 03V1-b]
gi|308166808|gb|EFO68998.1| phage antirepressor protein [Lactobacillus iners LactinV 03V1-b]
Length = 264
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----RYPLK 58
I F FE+N+IR + + D +FV KDVA LGY + N+A+ H K L
Sbjct: 6 IQIFNFENNEIRAL-NIDGKPYFVGKDVADVLGYADQNKALAMHVDDEDKLNDKTASSLG 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
GG +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y + T
Sbjct: 65 QRGGW----LINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVYMTDKKAYDITH 120
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQL 143
+ + L++ A Q KD Q+
Sbjct: 121 DRSGATLADLLQQAADQLKQKDIQI 145
>gi|307826181|ref|ZP_07656392.1| prophage antirepressor [Methylobacter tundripaludum SV96]
gi|307732820|gb|EFO03686.1| prophage antirepressor [Methylobacter tundripaludum SV96]
Length = 193
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATAL-----GYENSNEAINAHCKGVAKRYPLKTE 60
PF+F IRT D+ +WF AKDV TAL G + E + + KGV K E
Sbjct: 10 PFQFSELDIRTATDEHSEVWFNAKDVCTALDIVWSGSSATLENMPENWKGVWKLQTPSAE 69
Query: 61 ----GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q+ I+E +Y L+ +S P A++F WV E VLP +RKTG +
Sbjct: 70 NGRGGGEQEAVFINEAGLYHLIFRSNKPKAKEFANWVCETVLPEIRKTGFF 120
>gi|284800079|ref|ZP_05985661.2| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
gi|284796123|gb|EFC51470.1| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
Length = 322
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+++ F F N+I+ +++K+ WF+A +VA LGY +S + + T G
Sbjct: 45 NSVQSFNFNQNQIQ-VINKNGEAWFIASEVAAMLGYRDSYNMTRILDNDEKGTHNVSTLG 103
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G Q V +I+E Y KS P + F +WV EVLP +RKTG Y V
Sbjct: 104 GNQDVSVINESGFYHAAFKSRKPEVKPFRKWVTSEVLPAIRKTGGYQV 151
>gi|187477955|ref|YP_785979.1| phage protein [Bordetella avium 197N]
gi|115422541|emb|CAJ49066.1| phage protein [Bordetella avium 197N]
Length = 374
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 17/117 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE------ 60
F F + +R +V +D WFVA DV AL Y+N+++A+ H + E
Sbjct: 60 FNFGDHPVRVVV-RDCEPWFVATDVCAALDYKNASKAVGDHLDDDERMTIAANESHSNDS 118
Query: 61 ----------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG + + II+E +Y L+++S P A+KF +WV EVLP +RKTG+Y
Sbjct: 119 NQSLESSCGRGGARSLVIINESGLYALVLRSRKPEARKFAKWVTSEVLPQIRKTGAY 175
>gi|260588388|ref|ZP_05854301.1| toxin-antitoxin system, toxin component, Bro family [Blautia
hansenii DSM 20583]
gi|260541262|gb|EEX21831.1| toxin-antitoxin system, toxin component, Bro family [Blautia
hansenii DSM 20583]
Length = 219
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHC----KGVA 52
MS + FE E ++R IV D WFV KDVA ALGY ++ N AI H KGV
Sbjct: 1 MSELKIFENKEFGQVR-IVMIDGEPWFVGKDVARALGYGEGKSLNNAIANHVDDEDKGVT 59
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ + T GG Q + II+E +Y L+ S L SA++F+ WV EVLP++ KTG Y
Sbjct: 60 E---MMTPGGKQNMTIINESGLYALIFGSKLKSAKEFKHWVTSEVLPSVHKTGKY 111
>gi|261492257|ref|ZP_05988821.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312117|gb|EEY13256.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 196
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC---KGVAKRYPLK 58
+ I+ F F+SN +R + K++ +F DV + +NS +NA +GV K Y +
Sbjct: 23 TQISTFNFKSNPVRIEIIKNEP-YFCLVDVCLVMNIQNSRR-VNADMLNQEGVRKAY-VP 79
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
T G Q++ I+EP++YR++ KS A +F+ WVFEEVLP +RKTG Y +
Sbjct: 80 TTSGNQELTFINEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKYQAQ 131
>gi|76809803|ref|YP_333048.1| BRO domain-containing protein [Burkholderia pseudomallei 1710b]
gi|76579256|gb|ABA48731.1| BRO family, N-terminal domain protein [Burkholderia pseudomallei
1710b]
Length = 239
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS +T F+FE +RT V + + WFVAKDV LG N ++A+ A + L
Sbjct: 1 MSDLTLFKFEGRNLRT-VKINGDPWFVAKDVCDVLGITNPSDALTALDDDEKASFNLGLR 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G R++SE +Y L+++S P A+ F +WV VLP +RK GSY
Sbjct: 60 GSAP--RVVSESGLYALIMRSRKPQARAFRKWVTSVVLPAIRKDGSY 104
>gi|226940701|ref|YP_002795775.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
gi|226715628|gb|ACO74766.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
Length = 214
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVAKRYPLK 58
F FES+ +RTI +D IWFV DV AL + +A AH V+ +
Sbjct: 17 FSFESHSVRTIY-RDGEIWFVLNDVTEALAFSRGRDAARMLDDDERGAHIVRVSSNNQHE 75
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ +V I++E +Y L+++S P A++F++WV EVLP +RKTG+YS
Sbjct: 76 SFDREVEVTIVNESGLYSLILRSRKPEAKRFKKWVTSEVLPAIRKTGAYS 125
>gi|85059215|ref|YP_454917.1| hypothetical protein SG1237 [Sodalis glossinidius str. 'morsitans']
gi|84779735|dbj|BAE74512.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 215
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 23/180 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ITPF FE + +RT+V D+ WF A DV +AL +N ++A+ + L +G
Sbjct: 5 SITPFTFEDHLVRTVVINDEP-WFFAVDVYSALDIQNPSKALKILDSNERSNFKLGRQGD 63
Query: 63 IQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK-- 113
IISE ++ L+++ TLP +F +WV EVLP++RKTG Y K
Sbjct: 64 ---ANIISESGMFTLVLRCRYAVKQDTLP--HRFRKWVTSEVLPSIRKTGKYEHRVYKPE 118
Query: 114 ----LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
A AS + R+ H+ + N + + ++TG+ M+++H+P
Sbjct: 119 SHELFTANDASNLARLIWHMSHNFRFKQAWSNGIWY----NLREVTGIPSPHPMEVRHIP 174
>gi|237795001|ref|YP_002862553.1| antirepressor, phage associated [Clostridium botulinum Ba4 str.
657]
gi|229261612|gb|ACQ52645.1| antirepressor, phage associated [Clostridium botulinum Ba4 str.
657]
Length = 246
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE-GGIQKVRIISE 71
+RTI K+ IWFV KDVA LGYE +AI K P++ G Q II+E
Sbjct: 15 VRTI-QKENAIWFVGKDVAKCLGYERPTKAIQDRVDNEDKDEVPIQDSIGRNQNTPIINE 73
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+Y L++ S L +A+KF+RWV EVLP +R+TG Y
Sbjct: 74 SGLYSLVLSSKLSTAKKFKRWVTSEVLPQIRQTGGY 109
>gi|224475960|ref|YP_002633566.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420567|emb|CAL27381.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 255
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE +RT++ D+ +FV KDVA LGY N+ +A+N H K+
Sbjct: 1 MSELQVFNFEELPVRTLIMDDEP-YFVGKDVAEVLGYSNTRDALNKHVDEDDKKILTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ ++
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSKVLPAIRKHGIYATDS 115
>gi|145295994|ref|YP_001138815.1| hypothetical protein cgR_1918 [Corynebacterium glutamicum R]
gi|57158152|dbj|BAD84121.1| putative antirepressor [Corynebacterium glutamicum]
gi|140845914|dbj|BAF54913.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 260
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 83/146 (56%), Gaps = 10/146 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLK 58
+I PF F+ +++R + +D +VA DV+ LG+ ++ A+ H KG++ +
Sbjct: 2 SIQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEAS-AMTRHLDDEEKGLSS---WQ 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
T GG Q++ I+E +Y +++S P A++F+RWV EVLP++R+ G Y + A
Sbjct: 58 TPGGSQQMITITESGLYSAILRSRKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALD 117
Query: 118 SASTVLRVHKHL-EELAKQAGLKDNQ 142
T++R+ L EE A++A L+ Q
Sbjct: 118 DPDTIIRLATSLKEERARRAALETQQ 143
>gi|312873812|ref|ZP_07733856.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
gi|311090693|gb|EFQ49093.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
Length = 252
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKT 59
I F FE+N++RT+ + D +FV KD+A LGY N +A+ AH K V + + T
Sbjct: 6 IQIFNFENNEVRTL-NIDGKPYFVGKDIAAVLGYSNPQKALRAHVDEEDKTVNESF---T 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G + V +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y
Sbjct: 62 VNGTKAV-LINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVY 108
>gi|109392527|ref|YP_655656.1| gp77 [Mycobacterium phage Che12]
gi|91980677|gb|ABE67396.1| gp77 [Mycobacterium phage Che12]
Length = 280
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQKVR---IISEP 72
+V D WFVAKDV LG++N A+N H G + + T G + R +I+E
Sbjct: 31 VVQLDGEPWFVAKDVTDILGFKNGRGAVNDHVLPGQVQTERIATPGQVVPHRDMLVINEA 90
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT----SASTVLRVHKH 128
+YRL+++S +P+A F+ WV VLPT+RKTG + AP +A +ST L K
Sbjct: 91 GLYRLIMRSNVPAAAPFQDWVTAVVLPTIRKTGGAYI-APGSKAALDLMDSSTALEAIKK 149
Query: 129 LEELAKQAGLK 139
+A++A K
Sbjct: 150 AVAIAEEAQAK 160
>gi|37526773|ref|NP_930117.1| hypothetical protein plu2883 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786205|emb|CAE15257.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 314
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 73/119 (61%), Gaps = 11/119 (9%)
Query: 2 STITPFEFESNK-----IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RY 55
S I FEF+S+ + + K + ++F A ++A LGY N ++A+ HCK + K Y
Sbjct: 65 SIIKHFEFKSSNDQLVTVSGLKYKGKPVFF-AVELAEGLGYTNPSKALKDHCKSLIKLNY 123
Query: 56 PLKTEGGI----QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
E G+ + V + + D++RL+++S LPSA++F+ WV E VLP++ +TGSYS++
Sbjct: 124 NDSLELGLGDNPRGVILAGQSDMFRLVMRSNLPSAERFQDWVCEAVLPSIMETGSYSIK 182
>gi|312868619|ref|ZP_07728813.1| BRO family, N-terminal domain protein [Lactobacillus oris
PB013-T2-3]
gi|311095828|gb|EFQ54078.1| BRO family, N-terminal domain protein [Lactobacillus oris
PB013-T2-3]
Length = 264
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG---- 62
F F+ ++RT+ D +FV KDVA LGY++ N AIN H ++ + G
Sbjct: 6 FNFKGQQVRTVT-IDGEPYFVGKDVAEILGYKDLNRAINQHVDSDDRKALSRKNSGDSYA 64
Query: 63 --------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
KV +I+E VY L+ S LP A++F+ WV EVLP +RK G+Y A
Sbjct: 65 TLWSLNDWTNKV-VITESGVYSLIFSSELPQAKEFKHWVTSEVLPAIRKHGAYMTSAKIE 123
Query: 115 RA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T T++++ L++ ++ L Q KVN K T D++ A +
Sbjct: 124 EVLTDPDTIIQLATQLKQ-EREGRLIAEQ---KVNELTPKATYYDKVLA----------D 169
Query: 174 DEYLTITQIGERLNPPQRARFLNKLL 199
+TITQI + RA +NK L
Sbjct: 170 KSLVTITQIAKDYGMSGRA--MNKKL 193
>gi|238821325|ref|YP_002925141.1| hypothetical protein PH10_gp08 [Streptococcus phage PH10]
gi|238804907|emb|CAY56501.1| hypothetical protein [Streptococcus phage PH10]
Length = 237
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTE-GGIQ 64
F F ++RT+ D+ WFV KDVA LGY +AI+ H + + +Y L G Q
Sbjct: 5 FNFHGQEVRTLTIDDEP-WFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTDNLGRTQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
II+E +Y L++ S LP A++F+RWV EVLP +R+ G +
Sbjct: 64 NTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRRQGGF 106
>gi|218689443|ref|YP_002397655.1| putative antirepressor protein from phage origin [Escherichia coli
ED1a]
gi|218690200|ref|YP_002398412.1| putative antirepressor protein in prophage [Escherichia coli ED1a]
gi|218427007|emb|CAV17743.1| putative antirepressor protein from phage origin [Escherichia coli
ED1a]
gi|218427764|emb|CAR08674.2| putative antirepressor protein in prophage [Escherichia coli ED1a]
Length = 304
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 16/114 (14%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
T F+F ++IR +++K WFVAKDV AL NS +A+ A KGV Y L
Sbjct: 11 FTIFKFGDSEIR-VINKCGEPWFVAKDVCDALNLTNSRKALTALDDDEKGVTLSYTL--- 66
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q + I+SE +Y L++ K ++P KF +WV EVLP++RKTGSY
Sbjct: 67 GGEQNLSIVSESGMYTLVLRCRDAVNKGSVP--HKFRKWVTAEVLPSIRKTGSY 118
>gi|148544033|ref|YP_001271403.1| prophage antirepressor [Lactobacillus reuteri DSM 20016]
gi|184153427|ref|YP_001841768.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|227364953|ref|ZP_03848995.1| prophage antirepressor [Lactobacillus reuteri MM2-3]
gi|325682425|ref|ZP_08161942.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|148531067|gb|ABQ83066.1| prophage antirepressor [Lactobacillus reuteri DSM 20016]
gi|183224771|dbj|BAG25288.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|227070007|gb|EEI08388.1| prophage antirepressor [Lactobacillus reuteri MM2-3]
gi|324978264|gb|EGC15214.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
Length = 257
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ-- 64
F F ++RT+ ++ +FV KDVAT LGY+ AI H + K L G
Sbjct: 5 FNFNGQQVRTVTINNEP-YFVGKDVATILGYKKPENAIANHVENEDKTTTLIQGTGSNYK 63
Query: 65 -KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K II+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y
Sbjct: 64 SKSVIINESGLYSLILSSKLPTAKEFKHWVTSEVLPAIRKHGAY 107
>gi|169334329|ref|ZP_02861522.1| hypothetical protein ANASTE_00727 [Anaerofustis stercorihominis DSM
17244]
gi|169259046|gb|EDS73012.1| hypothetical protein ANASTE_00727 [Anaerofustis stercorihominis DSM
17244]
Length = 237
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ I FE E ++R+++ D +FV KDVA LGY A+ H K+ +
Sbjct: 1 MNEIKIFENSEFGRVRSLM-IDNEPYFVGKDVAEILGYAKPLNALANHIDEYDSLKQGLI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ G Q+ I+E +Y L++ S LPSA+KF+RWV EVLP++RKTG Y P ++
Sbjct: 60 DSMGRTQETIFINESGLYSLILSSKLPSAKKFKRWVTSEVLPSIRKTGEYKTTEP-IKEM 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVN--------RGVTKITGVDQLEAMDIKHLP 169
A LR A ++ + LK+ R + + L + LP
Sbjct: 119 LAEAKLR----------NARAREASIWLKIGQNIKSEDYRQICSSYASEALAGSAVIPLP 168
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
+ Y T TQ+G+ L A + ++ + L+ S+ Y K K DV
Sbjct: 169 EV-RETYYTATQLGDMLGIS--ANRIGRIANEHKLKTSRFGKWYHDKGKN---SSKEVDV 222
Query: 230 PMQHVEGSTQQLKW 243
+ EG Q K+
Sbjct: 223 FRYNSEGLEQIKKY 236
>gi|227497456|ref|ZP_03927688.1| conserved hypothetical protein [Actinomyces urogenitalis DSM
15434]
gi|226833081|gb|EEH65464.1| conserved hypothetical protein [Actinomyces urogenitalis DSM
15434]
Length = 69
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK 65
+RTIVD +NI+ AKD ATALGY N+N+AI HCKGV KRYPL+T GG Q+
Sbjct: 16 LRTIVD-GENIYICAKDAATALGYANTNKAIKDHCKGVTKRYPLETPGGTQE 66
>gi|284009383|emb|CBA76571.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 254
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 25 WFVAKDVATALGY-ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
WF KDV L S E KG+ K + T+GG Q++ ++EP++YR++ +S
Sbjct: 27 WFCLKDVCEILSIIVASPERFRMDDKGITK-HVTPTKGGNQQLVYVNEPNLYRVIFRSNK 85
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
P A++F+ WVF EVLP++RKTG Y P+ + +A H L N L
Sbjct: 86 PEAKQFQDWVFNEVLPSIRKTGRYDRHQPQPQTKAAERF--SHSDSRNLTHLVWCMTNGL 143
Query: 144 LLK------VNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ V + ++TG E ++H+P DE I I E L
Sbjct: 144 RFERSWSNAVWLALREVTGTPSPERFQVEHIPLM-ADECRRIYYITESL 191
>gi|240950412|ref|ZP_04754663.1| putative antirepressor protein [Actinobacillus minor NM305]
gi|240295032|gb|EER45888.1| putative antirepressor protein [Actinobacillus minor NM305]
Length = 223
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 16/116 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
++ F FE + IR I ++ WFVAKDV A+G NS A+ A KGV+ Y L
Sbjct: 7 LSTFNFEKSSIRVIAVNNEP-WFVAKDVCNAIGLSNSRMALLALDDDEKGVSSTYTL--- 62
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
GG Q + I+SE +Y L++ K ++P +F +WV EVLP +RKTG Y V
Sbjct: 63 GGEQDLAIVSESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPQIRKTGRYQV 116
>gi|113461541|ref|YP_719610.1| prophage antirepressor [Haemophilus somnus 129PT]
gi|112823584|gb|ABI25673.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 204
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPLKTE 60
+ I+ F F+S+++R I + +F DV LG S E N + KG L T+
Sbjct: 3 TQISTFNFKSHQVR-IQSFNNEPYFCLSDVCDVLGLNRRSAETFNLNEKGCNNIATL-TK 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q + I+EP++YR++ KS A +F+ WVFEEVLP +RKTG Y ++ PK
Sbjct: 61 GGEQIITFINEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKYQLK-PK 112
>gi|117530195|ref|YP_851038.1| prophage antirepressor [Microcystis phage Ma-LMM01]
gi|117165807|dbj|BAF36115.1| prophage antirepressor [Microcystis phage Ma-LMM01]
Length = 270
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGGI- 63
F F + +IR I+ D WF+A DV L + N++ A+ K K+ P + G +
Sbjct: 11 FNFNNQEIRVII-IDNEPWFIAADVCAVLEHTNTSVAL-LRLKVYEKQLVDPKQYLGSVS 68
Query: 64 -QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q + ISE +YRL++ S P A+ F+ WV +EVLPT+RKTG YSV K+ T +
Sbjct: 69 NQYISAISESGLYRLVLSSRKPQAELFQDWVVQEVLPTIRKTGRYSVSDFKIPTTYGEAL 128
Query: 123 LRVHKHLEEL 132
L + EL
Sbjct: 129 LEAGRLALEL 138
>gi|329114008|ref|ZP_08242775.1| Hypothetical protein APO_0784 [Acetobacter pomorum DM001]
gi|326696755|gb|EGE48429.1| Hypothetical protein APO_0784 [Acetobacter pomorum DM001]
Length = 249
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLKTEGG 62
F+FE + +RTI ++D + +V DV + L NS +A N +GVA T GG
Sbjct: 9 AFDFEGHTVRTI-NRDGVVLWVLTDVCSVLDIRNSRDAANRLDDDERGVA---ITDTLGG 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLRATS 118
Q++ +I+E +Y L++ S +A++F++WV EVLP LR+TG+YS+ + + + +
Sbjct: 65 SQEMTVINESGLYSLVLTSRKAAAKRFKKWVTAEVLPALRRTGTYSICTQPDIGHVLSVA 124
Query: 119 ASTVLRVHKHLEELAKQA 136
+ ++ + ++ LA QA
Sbjct: 125 EAAIVVSQQAVQTLAPQA 142
>gi|222778500|ref|YP_002576137.1| putative antirepressor, BRO family [Campylobacter lari RM2100]
gi|222539785|gb|ACM64885.1| putative antirepressor, BRO family [Campylobacter lari RM2100]
Length = 183
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA----KRY 55
MS++ FE E K+RTI DK+ F KD+ L +NS + N + R
Sbjct: 1 MSSVILFENKELGKVRTIRDKNNEPLFCLKDICDILEIQNSRDVRNTILREFELRRLNRR 60
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKL 114
T GI++ +I EP +Y +L++S P A+ F +WV +EVLP++RK G Y+ APKL
Sbjct: 61 SFDTGFGIKEFTMIDEPQLYFVLMRSDKPKAKPFRQWVIKEVLPSIRKQGYYAFNNAPKL 120
>gi|22538015|ref|NP_688866.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
agalactiae 2603V/R]
gi|22534917|gb|AAN00739.1|AE014276_20 prophage LambdaSa2, antirepressor protein, putative [Streptococcus
agalactiae 2603V/R]
Length = 236
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F ++RT+ ++ WFV KDVA LGY S AI H K+ G +Q
Sbjct: 5 FVFHGQEVRTVTINNEP-WFVGKDVADILGYSKSRNAIALHVDEDDALKQGITDNLGRMQ 63
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S LP ++F+RWV EVLP +R+ G+Y
Sbjct: 64 ETIIINESGLYSLILSSKLPQVKEFKRWVTSEVLPQIRQQGAY 106
>gi|261227201|ref|ZP_05941482.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. FRIK2000]
gi|261258792|ref|ZP_05951325.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. FRIK966]
Length = 188
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
T F+F ++IR +++K WFVAKDV AL NS +A+ A KGV Y L
Sbjct: 11 FTIFKFGDSEIR-VINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTL--- 66
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q + I+SE +Y L++ K ++P KF +WV EVLP++RK G Y K
Sbjct: 67 GGEQNLSIVSESGMYTLVLRCRDAVNKGSVP--HKFRKWVTAEVLPSIRKHGEYV----K 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ T+ + + L + GL+++ V++ G+D ++ + I+ +P
Sbjct: 121 GKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRF----GIDSIDELSIEQIP 172
>gi|258515121|ref|YP_003191343.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
gi|257778826|gb|ACV62720.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
Length = 299
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT------- 59
F +E K+RT++ + WFV DV L NS +AI+ + P ++
Sbjct: 49 FNYEGQKVRTVLINGEP-WFVGVDVCNILEINNSRQAISYLDVDEKQTIPSRSLTVINSD 107
Query: 60 --EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+GG Q + II+EP +Y L+++S P A+ F+RW+ EV+P++RKTG+Y +
Sbjct: 108 SQKGGAQYITIINEPGLYSLILRSRKPEAKAFKRWITHEVIPSIRKTGAYEM 159
>gi|299144345|ref|ZP_07037425.1| toxin-antitoxin system, toxin component, Bro family [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298518830|gb|EFI42569.1| toxin-antitoxin system, toxin component, Bro family [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 243
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS++ FE E K+ T+++KD +F+ K+VA LGY N+ +A+ H + + +
Sbjct: 1 MSSLITFENMEFGKL-TVMEKDGEFFFIGKEVAEKLGYANTRDALVRHVD-IDDKADVVF 58
Query: 60 EGGIQKVRIIS--EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q+ ++S E +Y L++ S LP A+ F+RWV EVLP++RK G Y
Sbjct: 59 HDGRQRRNMVSINESGLYALILSSKLPQAKDFKRWVTTEVLPSIRKNGGY 108
>gi|15801289|ref|NP_287306.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 EDL933]
gi|15830811|ref|NP_309584.1| antirepressor protein [Escherichia coli O157:H7 str. Sakai]
gi|168749693|ref|ZP_02774715.1| antirepressor protein [Escherichia coli O157:H7 str. EC4113]
gi|168756450|ref|ZP_02781457.1| antirepressor protein [Escherichia coli O157:H7 str. EC4401]
gi|168762502|ref|ZP_02787509.1| antirepressor protein [Escherichia coli O157:H7 str. EC4501]
gi|168771643|ref|ZP_02796650.1| antirepressor protein [Escherichia coli O157:H7 str. EC4486]
gi|168776098|ref|ZP_02801105.1| antirepressor protein [Escherichia coli O157:H7 str. EC4196]
gi|168783549|ref|ZP_02808556.1| antirepressor protein [Escherichia coli O157:H7 str. EC4076]
gi|168787563|ref|ZP_02812570.1| antirepressor protein [Escherichia coli O157:H7 str. EC869]
gi|195938935|ref|ZP_03084317.1| putative antirepressor protein [Escherichia coli O157:H7 str.
EC4024]
gi|208806147|ref|ZP_03248484.1| antirepressor protein [Escherichia coli O157:H7 str. EC4206]
gi|208815980|ref|ZP_03257159.1| antirepressor protein [Escherichia coli O157:H7 str. EC4045]
gi|208822624|ref|ZP_03262943.1| antirepressor protein [Escherichia coli O157:H7 str. EC4042]
gi|209400295|ref|YP_002270016.1| antirepressor protein [Escherichia coli O157:H7 str. EC4115]
gi|217328298|ref|ZP_03444380.1| antirepressor protein [Escherichia coli O157:H7 str. TW14588]
gi|254792556|ref|YP_003077393.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. TW14359]
gi|12514734|gb|AAG55918.1|AE005325_11 putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. EDL933]
gi|13361021|dbj|BAB34980.1| putative antirepressor protein [Escherichia coli O157:H7 str.
Sakai]
gi|187768494|gb|EDU32338.1| antirepressor protein [Escherichia coli O157:H7 str. EC4196]
gi|188016020|gb|EDU54142.1| antirepressor protein [Escherichia coli O157:H7 str. EC4113]
gi|188999134|gb|EDU68120.1| antirepressor protein [Escherichia coli O157:H7 str. EC4076]
gi|189356395|gb|EDU74814.1| antirepressor protein [Escherichia coli O157:H7 str. EC4401]
gi|189359642|gb|EDU78061.1| antirepressor protein [Escherichia coli O157:H7 str. EC4486]
gi|189367136|gb|EDU85552.1| antirepressor protein [Escherichia coli O157:H7 str. EC4501]
gi|189372554|gb|EDU90970.1| antirepressor protein [Escherichia coli O157:H7 str. EC869]
gi|208725948|gb|EDZ75549.1| antirepressor protein [Escherichia coli O157:H7 str. EC4206]
gi|208732628|gb|EDZ81316.1| antirepressor protein [Escherichia coli O157:H7 str. EC4045]
gi|208738109|gb|EDZ85792.1| antirepressor protein [Escherichia coli O157:H7 str. EC4042]
gi|209161695|gb|ACI39128.1| antirepressor protein [Escherichia coli O157:H7 str. EC4115]
gi|217318725|gb|EEC27151.1| antirepressor protein [Escherichia coli O157:H7 str. TW14588]
gi|254591956|gb|ACT71317.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. TW14359]
gi|320187822|gb|EFW62492.1| Phage antirepressor protein [Escherichia coli O157:H7 str. EC1212]
gi|326339368|gb|EGD63180.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1044]
gi|326341501|gb|EGD65292.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1125]
Length = 292
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
T F+F ++IR +++K WFVAKDV AL NS +A+ A KGV Y L
Sbjct: 11 FTIFKFGDSEIR-VINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTL--- 66
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q + I+SE +Y L++ K ++P KF +WV EVLP++RK G Y K
Sbjct: 67 GGEQNLSIVSESGMYTLVLRCRDAVNKGSVP--HKFRKWVTAEVLPSIRKHGEYV----K 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ T+ + + L + GL+++ V++ G+D ++ + I+ +P
Sbjct: 121 GKKTTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRF----GIDSIDELSIEQIP 172
>gi|294678098|ref|YP_003578713.1| BRO family protein [Rhodobacter capsulatus SB 1003]
gi|294476918|gb|ADE86306.1| BRO family, N-terminal domain protein [Rhodobacter capsulatus SB
1003]
Length = 249
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 1 MSTITPFEF------ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR 54
M+ +T F+F ES + V D WF+A+DV LG +N +A+ +
Sbjct: 1 MNELTTFQFQPAEGTESARPVRTVTIDGEPWFIARDVCDVLGLDNVTKALLSLDPDEKAL 60
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+++ GG Q IISE +Y L+++S P A+ F +WV VLPT+RKTGSY
Sbjct: 61 NNVQSLGGAQTTNIISESGLYALVLRSRRPEAKAFRKWVTATVLPTIRKTGSY 113
>gi|322384069|ref|ZP_08057789.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321151225|gb|EFX44522.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 236
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
+V KD + W+VAKDV+ LG+ +++ ++T GG Q+V II+E +Y
Sbjct: 1 MVVKDGHPWWVAKDVSELLGFRMASDFTRTLDDDEKDTQIVRTPGGNQEVTIINESGLYS 60
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
++KS P A++F+RWV EVLP +RKTG Y+ +
Sbjct: 61 AILKSRKPEAKQFKRWVTHEVLPAIRKTGMYATD 94
>gi|85059070|ref|YP_454772.1| hypothetical protein SG1092 [Sodalis glossinidius str. 'morsitans']
gi|84779590|dbj|BAE74367.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 259
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKT 59
+I PF FE +++RT + + WFV DV +ALG N+ +A+ + K +
Sbjct: 5 SIVPFTFEKHEVRTTILNGEP-WFVGIDVCSALGISNNRDALSKLDDDEKTTVALTDSQP 63
Query: 60 EGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYS---- 108
G Q++ +ISEP ++ L+++ TLP +F +WV E+LP++RKTG Y
Sbjct: 64 GTGAQRISLISEPSMFTLVLRCRDAVKQGTLP--HRFRKWVTSEILPSIRKTGKYEHPVY 121
Query: 109 -VEAPKLRATS-ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
E+ +L T+ S + R+ H+ + N + + ++TG+ + M+++
Sbjct: 122 KPESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWY----ALREVTGIPSPQPMEVR 177
Query: 167 HLP 169
H+P
Sbjct: 178 HIP 180
>gi|66395901|ref|YP_240269.1| ORF016 [Staphylococcus phage 96]
gi|62636322|gb|AAX91433.1| ORF016 [Staphylococcus phage 96]
Length = 241
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +R I + + +F+ KDVA LGY ++ AI H + + +
Sbjct: 1 MQELQTFNFEELPVRKI-EVEGEPFFLGKDVAEILGYARADNAIRNHVDSEDRLMHQISA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y V +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQVPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ N I ++ N QR+ + +V K++G
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 203
>gi|66396285|ref|YP_240644.1| ORF018 [Staphylococcus phage 52A]
gi|62636701|gb|AAX91812.1| ORF018 [Staphylococcus phage 52A]
gi|116235520|gb|ABJ88855.1| putative antirepressor [Staphylococcus phage 80]
Length = 241
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +R I + + +F+ KDVA LGY ++ AI H + + +
Sbjct: 1 MQELQTFNFEELPVRKI-EVEGEPFFLGKDVAEILGYARADNAIRNHVDSEDRLMHQISA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y + +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQIPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ N I ++ N QR+ + +V K++G
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGA 203
>gi|319776454|ref|YP_004138942.1| putative antirepressor protein [Haemophilus influenzae F3047]
gi|329123939|ref|ZP_08252491.1| antirepressor protein Ant [Haemophilus aegyptius ATCC 11116]
gi|317451045|emb|CBY87276.1| Putative antirepressor protein [Haemophilus influenzae F3047]
gi|327468134|gb|EGF13621.1| antirepressor protein Ant [Haemophilus aegyptius ATCC 11116]
Length = 289
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 16/116 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLK 58
+ ++ F FES IRT+ ++ WFVAKDV A+G +N+ +A+ A KGV Y
Sbjct: 5 TQLSTFNFESKSIRTLAINNEP-WFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSY--- 60
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GG Q++ IISE +Y L++ K ++P +F +WV EVL T+RKTG Y
Sbjct: 61 TPGGQQEMNIISESGMYTLILRCRDAVKKGSIP--HRFRKWVTAEVLLTIRKTGKY 114
>gi|293394090|ref|ZP_06638393.1| phage antirepressor protein [Serratia odorifera DSM 4582]
gi|291423452|gb|EFE96678.1| phage antirepressor protein [Serratia odorifera DSM 4582]
Length = 274
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
Query: 3 TITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
I F+F+S+ +R+++ +Q WF+A DV ALG ++++A+NA KR
Sbjct: 4 VIKTFDFKSSTGELLASVRSVL-IEQAPWFIAIDVCEALGLSHTHKALNA-VDDEDKREQ 61
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G +K +++E +Y L++KS P A++F+RW+ EVLP++R TGSYS+
Sbjct: 62 EDYSGSGRKPLLVNESGLYSLIIKSRKPQAKRFKRWITSEVLPSIRATGSYSL 114
>gi|273809598|ref|YP_003344836.1| possible bacteriophage antirepressor [Aggregatibacter phage S1249]
gi|261410505|gb|ACX80336.1| possible bacteriophage antirepressor [Aggregatibacter phage S1249]
Length = 217
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLK 58
MS + F F SN +R + +Q F DV +NS + +GV Y L
Sbjct: 1 MSDLQIFNFNSNPVRVELFDNQPH-FCLLDVCEIFEIQNSRRVQSQMLDPQGVRLAYILA 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ ++ I+EP++YR++ +S P A+ F+ WVFEEVLP +RKTG Y ++ P L A
Sbjct: 60 KDEKQRRTAFINEPNLYRIIFRSEKPIAKNFQNWVFEEVLPQIRKTGQYQLQQPALPA 117
>gi|288572745|ref|ZP_06391102.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568486|gb|EFC90043.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 376
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S +T FEFE +R +V + N W+VAKDV LG + +++ + + L G
Sbjct: 118 SDVTLFEFERMVVR-VVFINGNPWWVAKDVCDVLGLSDVSKSCSKLDEDEKLIRKLFVSG 176
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ +ISE +Y L+++S P A++F+RWV E+LPT+RKTGSY++
Sbjct: 177 QNRDTLLISESGLYILIMRSNKPGAKRFKRWVTHELLPTIRKTGSYAL 224
>gi|323517747|gb|ADX92128.1| prophage antirepressor [Acinetobacter baumannii TCDC-AB0715]
Length = 253
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
M+ ++ F F ++RTIV KD IWFV DV L N + A + A+ L T
Sbjct: 1 MNNVSVFNFNQKEVRTIVKKDGEIWFVLSDVCNVLEIGNVSMAA---SRLDAEEITLSTI 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
EG + +++E +Y L++ S P A++F++WV +VLP++RK G Y
Sbjct: 58 EGSHRPTNLVNESGLYSLVLTSRKPEAKQFKKWVTSDVLPSIRKNGGY 105
>gi|268599838|ref|ZP_06134005.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583969|gb|EEZ48645.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 284
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 122
Query: 122 VLRV 125
+ R
Sbjct: 123 LRRA 126
>gi|254494526|ref|ZP_05107697.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|268604438|ref|ZP_06138605.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682892|ref|ZP_06149754.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|226513566|gb|EEH62911.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|268588569|gb|EEZ53245.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268623176|gb|EEZ55576.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 284
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 117
>gi|240081486|ref|ZP_04726029.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|240118724|ref|ZP_04732786.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|240124263|ref|ZP_04737219.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
Length = 280
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|240113766|ref|ZP_04728256.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
Length = 280
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|300764695|ref|ZP_07074686.1| hypothetical protein LMHG_11073 [Listeria monocytogenes FSL N1-017]
gi|300514581|gb|EFK41637.1| hypothetical protein LMHG_11073 [Listeria monocytogenes FSL N1-017]
Length = 269
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 27/211 (12%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRY 55
M+ + FE E +RT++ D FV KDVA+ LGY N +A+ H K V + +
Sbjct: 14 MNELKVFENAEFGSVRTVMIGDVP-HFVGKDVASILGYTNPQKALRDHVDEEDKTVNESF 72
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+ I +I+E +Y L++ S +P+A+KF+RWV EVLP++R+ G Y+ E +
Sbjct: 73 SVNGTMAI----LINESGLYSLIISSKMPNAKKFKRWVTNEVLPSIRQHGVYATEDFITK 128
Query: 116 AT-SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ + + V K L+E + ++ Q++L++ V+ + Q N+
Sbjct: 129 SIEDPAWAISVLKQLQEKKEMVAMQ-QQMILEMKPKVSYYDLILQ-------------NN 174
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
++I++I + +A +NKLL + G+Q
Sbjct: 175 SVMSISKISKDYGMSSQA--MNKLLHELGIQ 203
>gi|240950437|ref|ZP_04754688.1| putative anti-repressor protein [Actinobacillus minor NM305]
gi|240295057|gb|EER45913.1| putative anti-repressor protein [Actinobacillus minor NM305]
Length = 211
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLK 58
+ ++ F FE++ IRTI +++ WF+AKDV A+ N +AI + KGVA
Sbjct: 5 TQLSTFNFETHAIRTIAINNES-WFIAKDVCEAVNISNYRDAIERLDEDEKGVAL---TD 60
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
T GG Q++ IISE +Y L++ K ++P +F +WV EVLP +RKTG YS
Sbjct: 61 TLGGQQEMNIISESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPQIRKTGQYSQNV 118
Query: 112 PKLRATSAS---TVLRVHKHLEELAK 134
++ V+ H+ E++AK
Sbjct: 119 AQITPAEPEPKPDVVIPHEKAEQIAK 144
>gi|240017344|ref|ZP_04723884.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
Length = 280
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|37651371|ref|NP_932668.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499280|gb|AAQ91679.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 320
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 28/179 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
I F+F ++ +R ++++DQ + FVAKDVA +LGYE S A+N H K Y E
Sbjct: 6 IGQFKFGEDTFTLRYVLERDQQVKFVAKDVANSLGYEKSRNAVNQHVDDKYKFTYEQAPE 65
Query: 61 GGIQKVR----------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
G +I++ V +L++KS LP A + + W+FEEV+P + T
Sbjct: 66 NGALAANSAVKQGDPLYLHPSTVLITKEGVIQLIMKSKLPYAVELQAWLFEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRA----TSASTVLRVHKHLEELAK--QAGLKDNQLLLKVNRGVTKITGV 157
G Y AP ++ T ++ +++ + L E+A+ A + N L+ N + T V
Sbjct: 126 GKY---APAIKMETDETLSTALIKSNTDLAEIARGLMAANERNNALVTQNNALMAQTQV 181
>gi|237746236|ref|ZP_04576716.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377587|gb|EEO27678.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 268
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATAL--GYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
F F++ +R I +++ +IWF+A DV A+ G E ++ KG+ + +T GG Q
Sbjct: 60 FNFDNFPVRAI-NRNGDIWFIAADVCAAIDIGTEQIRR-LDDDEKGL---HLTQTPGGKQ 114
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ II+E +Y L+++S P A++F +WV EVLP +RKTG Y+V +
Sbjct: 115 EMSIINESGLYALILRSRKPEAKRFRKWVTSEVLPAIRKTGKYAVNS 161
>gi|285002410|ref|YP_003422474.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343670|gb|ACH69485.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 241
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ------------- 64
V+KD N + +A LGY+ +AI H K K + EG I
Sbjct: 22 VEKD-NFMYGGHGIAHVLGYKQPKDAIRNHVKPQWKTNWEEIEGAINHRPLMTSLDQDNI 80
Query: 65 ------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
ISE VY L++KS LP+A++F+RW+FEEVLP LRK+G YS++ +
Sbjct: 81 PVNWQPNTVFISEAGVYALIMKSKLPAAEEFQRWLFEEVLPELRKSGIYSIKDQQ----C 136
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ V+ K L + A ++ QL LK++ T I D + +I +S +EY
Sbjct: 137 SKDVVNYDKKLAD----AQMETLQLKLKLSEANTTIAKYD-AKVAEINQQHASQINEYCL 191
Query: 179 ITQIGERLNPPQRARF 194
+R Q A F
Sbjct: 192 ANVEMKRNYEHQMAEF 207
>gi|317496640|ref|ZP_07954986.1| BRO family domain-containing protein [Gemella moribillum M424]
gi|316913254|gb|EFV34754.1| BRO family domain-containing protein [Gemella moribillum M424]
Length = 243
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS++ FE T+++KD +F+ K+VA LGY N+ +A+ H K + +
Sbjct: 1 MSSLITFENMGFGKLTVMEKDGEFFFIGKEVAEKLGYANTRDALVRHVDTDDKADVVFHD 60
Query: 61 GGIQKVRI-ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G ++ + I+E +Y L++ S LP A+ F+RW+ EVLP++RK G Y
Sbjct: 61 GRQRRNMVSINESGLYSLILSSKLPQAKDFKRWITTEVLPSIRKNGGY 108
>gi|59801979|ref|YP_208691.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|59718874|gb|AAW90279.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
Length = 332
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 55 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 111
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 112 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 165
>gi|258541362|ref|YP_003186795.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01]
gi|256632440|dbj|BAH98415.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01]
gi|256635497|dbj|BAI01466.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-03]
gi|256638552|dbj|BAI04514.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-07]
gi|256641606|dbj|BAI07561.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-22]
gi|256644661|dbj|BAI10609.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-26]
gi|256647716|dbj|BAI13657.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-32]
gi|256650769|dbj|BAI16703.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653760|dbj|BAI19687.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-12]
Length = 247
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ PF FE ++R ++D+ ++V DV L + A N R + T GG
Sbjct: 5 LIPFSFEGTEVR-VLDRKGTPFWVHADVCAVLEIAQPHHAANRLDDDEKGRAIVTTLGGP 63
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
Q++ +I+E ++ L++ S P+A++F++W+ EV+P++RKTG Y V AP
Sbjct: 64 QEMTVINESGLWSLVLTSRKPAAKRFKKWITSEVIPSIRKTGGYMVAAP 112
>gi|268602172|ref|ZP_06136339.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268586303|gb|EEZ50979.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 284
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 117
>gi|194099532|ref|YP_002002662.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|239999738|ref|ZP_04719662.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|240126473|ref|ZP_04739359.1| putative phage associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268685058|ref|ZP_06151920.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|193934822|gb|ACF30646.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|268625342|gb|EEZ57742.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 280
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|268687322|ref|ZP_06154184.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627606|gb|EEZ60006.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 284
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 117
>gi|240014896|ref|ZP_04721809.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
Length = 277
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|268597587|ref|ZP_06131754.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268551375|gb|EEZ46394.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 301
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 134
>gi|240128936|ref|ZP_04741597.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 280
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|240116501|ref|ZP_04730563.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|240121966|ref|ZP_04734928.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|260439742|ref|ZP_05793558.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
Length = 280
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|312898469|ref|ZP_07757859.1| toxin-antitoxin system, toxin component, Bro family [Megasphaera
micronuciformis F0359]
gi|310620388|gb|EFQ03958.1| toxin-antitoxin system, toxin component, Bro family [Megasphaera
micronuciformis F0359]
Length = 256
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-V 66
EF S +I T++D + + V KDVA LGY ++++A+ H K T+ G + +
Sbjct: 11 EFGSVRI-TVIDGEP--FLVGKDVAEILGYRDTSDALKRHVDEEDKLTRCFTDSGQNREM 67
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
II+E +Y L+++S LP A+KF+RWV EVLP +R+ G Y+++
Sbjct: 68 YIINESGLYSLILRSQLPKARKFKRWVTSEVLPAIRRHGMYAID 111
>gi|309379882|emb|CBX21293.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 281
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTEG 61
T++ F+F++ + + ++ F DVA L N+N N GV K Y + T+G
Sbjct: 2 TLSIFQFQAEQSVRVEFQNNEPLFCLTDVARILEISNANPLRFNMKRDGVHKMYSVDTKG 61
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y +
Sbjct: 62 RKNEITYINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI 109
>gi|78356784|ref|YP_388233.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219189|gb|ABB38538.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 184
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 15 RTIVDKDQNIWFVAKDVATALGYE--NSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
RTIVD++ +WFVA DV LG + +S ++ K R L + G + + II+EP
Sbjct: 16 RTIVDENGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPG-KPLLIINEP 74
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
+Y L+ +S P A F+ WV EEVLP++RK G+Y + P + ++++ + EL
Sbjct: 75 GLYTLIFQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKP---TDTDESIIQKAMQIIEL 131
Query: 133 AKQ 135
A++
Sbjct: 132 ARE 134
>gi|71908129|ref|YP_285716.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71847750|gb|AAZ47246.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 172
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTEGGIQKVRIISEPDV 74
+ +DKD WF+A DV ALG + + + ++ KGV + L GGIQ+V IISE +
Sbjct: 38 SALDKDGQAWFIAADVCKALGLDRTATSRLDEDEKGVCSTHTL---GGIQQVAIISESGL 94
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Y L+ +S A++F++WV V+P++RK G Y
Sbjct: 95 YSLIFRSRKELAKRFKKWVTSVVIPSIRKHGGY 127
>gi|317165032|gb|ADV08573.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 278
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 113
>gi|268595552|ref|ZP_06129719.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|293398333|ref|ZP_06642524.1| phage associated protein [Neisseria gonorrhoeae F62]
gi|268548941|gb|EEZ44359.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|291611257|gb|EFF40341.1| phage associated protein [Neisseria gonorrhoeae F62]
Length = 301
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 134
>gi|255066414|ref|ZP_05318269.1| toxin-antitoxin system, toxin component, Bro family [Neisseria
sicca ATCC 29256]
gi|255049294|gb|EET44758.1| toxin-antitoxin system, toxin component, Bro family [Neisseria
sicca ATCC 29256]
Length = 323
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKT 59
M+ + F F +++R + + + F DVA L +N+ + N GV K Y
Sbjct: 1 MNQVQHFNFNQSQVRVEMHNGEPL-FCLTDVAQILEIQNTKSSRFNLKEDGVHKMYLTDK 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G Q+ ISEP++YR++ +S A KF+ W+FEEV+PT+RKTG Y ++
Sbjct: 60 LGRNQEATFISEPNLYRVIFRSNKAEAIKFQDWIFEEVIPTIRKTGGYQAKS 111
>gi|56419054|ref|YP_146372.1| phage associated-antirepressor [Geobacillus kaustophilus HTA426]
gi|56378896|dbj|BAD74804.1| phage associated-antirepressor [Geobacillus kaustophilus HTA426]
Length = 246
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQK 65
F + +++RTI+ KD +WFVAKDV L ++ +A+ + P+ G Q+
Sbjct: 8 FIYSGSQVRTII-KDDEVWFVAKDVCEILDIADARKAVQRLDEDERSLIPVTDSLGRKQE 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I++EP +Y L++ S A++F+RWV EV+PT+RKTG Y
Sbjct: 67 TFIVNEPGLYTLILGSRKSEAKQFKRWVTHEVIPTIRKTGGY 108
>gi|260664103|ref|ZP_05864956.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260561989|gb|EEX27958.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 260
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-----Y 55
M+ + F+F +RT++ D +FV KDV LGY+N+++A+ H K
Sbjct: 11 MNDLQIFKFNGLDVRTVL-IDGEPYFVGKDVTEILGYKNASKALADHVDSEDKLNNETLS 69
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
L GG +++E +Y L++ S LP+A+KF+ WV EVLP +RK G+Y +
Sbjct: 70 SLGQRGGW----LVNESGLYSLIISSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFD 125
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQL 143
+ + L L++ A Q KD Q+
Sbjct: 126 VVNNKSGLA--DLLQQAADQLKRKDIQI 151
>gi|167746117|ref|ZP_02418244.1| hypothetical protein ANACAC_00813 [Anaerostipes caccae DSM 14662]
gi|167654632|gb|EDR98761.1| hypothetical protein ANACAC_00813 [Anaerostipes caccae DSM 14662]
Length = 232
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 23/146 (15%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--------CKGV 51
M + FE E ++RT+ ++ WFV KDVATALGY + A+ H C+
Sbjct: 1 MKDLMIFENVEFGQMRTVTINNEP-WFVGKDVATALGYADYFGALKKHVDLEDKQNCQNN 59
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ P + + +I+E +Y L+ S L SA+KF+ WV EVLP+LRKTGSY +
Sbjct: 60 SFDSP-------RGMTVINESGLYALIFGSKLESAKKFKHWVTSEVLPSLRKTGSYEM-- 110
Query: 112 PKLRATSASTVLRVHKHLEELAKQAG 137
K +T +L H E++ K G
Sbjct: 111 -KNYSTEMKAILM---HDEKIVKIDG 132
>gi|293410709|ref|ZP_06654285.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471177|gb|EFF13661.1| conserved hypothetical protein [Escherichia coli B354]
Length = 314
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
T F+F ++IR +++K + WFVAKDV AL NS +A+ A KGV Y L
Sbjct: 33 FTIFKFGDSEIR-VINKCGDPWFVAKDVCDALTLTNSRKALTALDDDEKGVTLSYTL--- 88
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q + I+SE +Y L++ K ++P KF +WV EVLP++RK G Y K
Sbjct: 89 GGEQNLSIVSESGMYTLVLRCRDAVNKGSVP--HKFRKWVTAEVLPSIRKHGEYV----K 142
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ T+ + + L + GL+ + V++ G+D ++ + I+ +P
Sbjct: 143 GKKTTVEERTPLRDAVNMLVGKKGLRYDDAYNMVHQRF----GIDSIDELSIEQIP 194
>gi|291042992|ref|ZP_06568730.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291013131|gb|EFE05100.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 301
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT + + WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRTQILGAEP-WFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTA 134
>gi|238909831|ref|ZP_04653668.1| putative antirepressor protein in prophage [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
Length = 195
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I+ F K+R IV+ + WF+AKDV AL + + + Y + T GGI
Sbjct: 31 ISVIRFGGIKVR-IVNMGGDPWFIAKDVCAALEIVDHKVPMRRLNDNEKEGYSIPTLGGI 89
Query: 64 QKVRIISEPDVYRLLVKS---TLP--SAQKFERWVFEEVLPTLRKTGSYSV 109
Q + I+SE Y+L+ +S ++P +A +F WVF EV+P++RKTGSY V
Sbjct: 90 QTMTIVSESGFYKLIARSRKASIPGTAANRFSEWVFGEVIPSIRKTGSYGV 140
>gi|159039271|ref|YP_001538524.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|159039322|ref|YP_001538575.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|157918106|gb|ABV99533.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|157918157|gb|ABV99584.1| prophage antirepressor [Salinispora arenicola CNS-205]
Length = 283
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
IT FEF +RT+ ++ WFVA DV AL N +A++ ++ P+ T+ G
Sbjct: 22 ITTFEFGDLPLRTVTVGNEP-WFVAVDVCRALEIGNPRQAVSYLDDDEVRQAPVTTDDGS 80
Query: 64 QKV---RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+V ++SE +Y L+++S P A+ F+RWV +VLP +R TG Y
Sbjct: 81 DRVLMTNVVSEAGLYSLILRSRKPEAKAFKRWVTHDVLPAIRATGRY 127
>gi|222148720|ref|YP_002549677.1| Prophage antirepressor protein [Agrobacterium vitis S4]
gi|221735706|gb|ACM36669.1| Prophage antirepressor protein [Agrobacterium vitis S4]
Length = 263
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN--------------- 45
MS F+FE+ +R + D WFVA DV L ENS +A+
Sbjct: 1 MSGFLTFDFENQAVRAF-EHDGQEWFVAVDVCRCLRLENSRQALTRLSDDEKRSCNLNTL 59
Query: 46 AHCKGVAKRYPLKTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
KG+ ++G G I++EP +YRL+ ST P A++ +R+VF EVLP LR
Sbjct: 60 TDSKGIIFNAINDSDGIRAGNPNATIVNEPGLYRLIFTSTKPEAERLKRFVFHEVLPALR 119
Query: 103 KTGSYSVE 110
TG ++ E
Sbjct: 120 HTGCFAPE 127
>gi|71906428|ref|YP_284015.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71846049|gb|AAZ45545.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 172
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 7 FEFES-----NKIRTIVDKDQNIWFVAKDVATALGYENSN-EAINAHCKGVAKRYPLKTE 60
F+F++ N + +DKD WFV DV ALG + + ++ +GVA + L
Sbjct: 24 FQFDNVATGDNFALSALDKDGQAWFVGADVCKALGLDRTAIRRLDDDERGVASTHTL--- 80
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
GG Q+V II+EP +Y L+ S SA++F++WV V+P++R+ G Y
Sbjct: 81 GGTQQVSIINEPGLYSLIFSSRKESAKRFKKWVTSVVIPSIRQNGGY 127
>gi|219563224|ref|YP_002455816.1| antirepressor [Lactobacillus phage Lv-1]
gi|215536991|gb|ACJ68928.1| antirepressor [Lactobacillus phage Lv-1]
Length = 275
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F F +RT++ D +FV KDVA LGY+ A+ H K L
Sbjct: 1 MKDLQIFNFRGLDVRTVL-IDGEPYFVGKDVADVLGYKKPENAVANHVDEEDKTTTLIQG 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
G K I++E +Y L++ S LP+A+KF+ WV EVLP +RK G+Y +
Sbjct: 60 TGSNYKSKTVIVNESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVV 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQL 143
+ + L L++ A Q KD Q+
Sbjct: 120 NNKSGLA--DLLQQAADQLKQKDIQI 143
>gi|162290117|ref|YP_001604100.1| putative anti-repressor protein [Staphylococcus phage phiMR11]
gi|161958547|dbj|BAF95102.1| putative anti-repressor protein [Staphylococcus phage phiMR11]
Length = 229
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT+ + D +FV D+A LGY+ AI H K L
Sbjct: 1 MQALQTFNFEELPVRTL-EVDGEPYFVGSDIAKILGYQKPQNAIATHVDSEDKTTTLIQG 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G II+E +Y L+ S L +A++F+RWV EVLPTLR+TG+Y
Sbjct: 60 TGSNYKSNAVIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRRTGTY 109
>gi|116512815|ref|YP_811722.1| phage-encoded protein [Lactococcus lactis subsp. cremoris SK11]
gi|116108469|gb|ABJ73609.1| Uncharacterized phage-encoded protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 260
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + F F + +RT++ D+ WFV KDVA LGY N+ +A+ H K + T
Sbjct: 1 MNELQNFNFNNLPVRTVLIDDEP-WFVGKDVAKILGYANTKDALLKHVDDEDKLGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + +++E +Y L++ ++ A++F+RW+ EVLPT+RK G+Y +A
Sbjct: 60 SGQKRNMVVVNESGLYNLILGASKQGKNQEIKEKARQFKRWITHEVLPTIRKHGAYMTDA 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLK 146
S + L +L QAG + QL L+
Sbjct: 120 KAQDVISGNG-------LADLLLQAGNQIKQLELE 147
>gi|200389320|ref|ZP_03215931.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199601765|gb|EDZ00311.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 288
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 2 STITPFEF---ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
+ I P F E++ +R V D WF KDV L N + + +GV K Y
Sbjct: 41 AVIAPVTFSFHETHDVRIQV-IDGEPWFCLKDVCGVLCIANPRDLMAKQLDKEGVDKIYT 99
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L T+GG Q++ ++EP++YR++ +S A++F+ WVF +VLPT+RK+G Y
Sbjct: 100 L-TDGGKQQLVYVNEPNLYRVIFRSNKQEAKQFQDWVFNDVLPTIRKSGRY 149
>gi|31544021|ref|NP_852746.1| putative antirepressor protein Ant [Haemophilus phage Aaphi23]
gi|31408065|emb|CAD90799.1| putative antirepressor protein Ant [Haemophilus phage Aaphi23]
Length = 298
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 16/116 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLK 58
S ++ + FES+ IRT+ ++ WF+AKDV A+G +N+ +A+ A KGV
Sbjct: 5 SQLSTYNFESHTIRTLAINNEP-WFIAKDVCDAIGIDNNRKALLALDEDEKGVTLS---N 60
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T GG Q++ IISE +Y L++ K ++P +F +WV EVLP +RKTG Y
Sbjct: 61 TLGGKQEMNIISESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPAIRKTGKY 114
>gi|284009362|emb|CBA76554.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 252
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF DV AL NS++ ++ GV K Y L+++G ++ ++EP++YR++ +S
Sbjct: 26 WFCLNDVCKALTVINSSDLLSKQLDKAGVEKIY-LRSDGQRRQFAFVNEPNLYRVIFRSN 84
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS--ASTVLRVHKHLEELAKQAGLKD 140
A++F+ WVF EVLP++RKTG Y P +A+ + + R HL +
Sbjct: 85 KLEAKQFQDWVFNEVLPSIRKTGKYEHPQPHPKASERFSHSDTRNLTHLVWCMTNGFRFE 144
Query: 141 NQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN 187
V + ++TG E + H+P DE I I E L+
Sbjct: 145 RSWSNAVWLALREVTGTASPERFQVAHIPLMA-DECRRIYYITESLH 190
>gi|293367985|ref|ZP_06614620.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291317882|gb|EFE58293.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 246
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKT 59
M+ + F FE +RT+ D+ +FV KDVA LGY +AI H K + P++
Sbjct: 1 MNELQTFNFEELPVRTLSIDDEP-YFVGKDVADILGYSRGAKAIQDHIDKEDIRVVPIQD 59
Query: 60 EGG-IQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G QK +I+E +Y L++ + S A+ F+RW+ EVLP++RKTGSY V
Sbjct: 60 RTGRYQKASLINESGLYTLVIDAARQSNNRSIKEKAKAFKRWITNEVLPSIRKTGSYQVP 119
Query: 111 APKLRA 116
+ + A
Sbjct: 120 SDPMDA 125
>gi|256021965|ref|ZP_05435830.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia sp. 4_1_40B]
gi|325497772|gb|EGC95631.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia fergusonii ECD227]
Length = 292
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTE 60
T F+F ++IR +++K WFVAKDV AL NS +A+ A KGV Y L
Sbjct: 11 FTIFKFGDSEIR-VINKCGEPWFVAKDVCDALDLTNSRKALTALDDDEKGVTLSYTL--- 66
Query: 61 GGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
GG Q + I+SE +Y L++ K ++P KF +WV EVLP++RK G Y K
Sbjct: 67 GGEQNLSIVSESGMYTLVLRCRDAVNKGSVP--HKFRKWVTAEVLPSIRKHGEYV----K 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ T+ + + L + GL+ + V++ G+D ++ + I+ +P
Sbjct: 121 GKKTTVEERTPLRDAVNMLVGKKGLRYDDAYNMVHQRF----GIDSIDELSIEQIP 172
>gi|300902126|ref|ZP_07120131.1| BRO family protein [Escherichia coli MS 84-1]
gi|301306877|ref|ZP_07212924.1| BRO family protein [Escherichia coli MS 124-1]
gi|300405791|gb|EFJ89329.1| BRO family protein [Escherichia coli MS 84-1]
gi|300837886|gb|EFK65646.1| BRO family protein [Escherichia coli MS 124-1]
gi|315252740|gb|EFU32708.1| BRO family protein [Escherichia coli MS 85-1]
gi|320180575|gb|EFW55505.1| prophage antirepressor [Shigella boydii ATCC 9905]
Length = 192
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGIQK 65
F+S +R +V + + WFVAKDV AL NS A+ + KGV Y T GG Q
Sbjct: 30 FDSVNVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTY---TPGGNQN 85
Query: 66 VRIISEPDVYRLLVKS---TLPS--AQKFERWVFEEVLPTLRKTGSYSV 109
+RIISE Y+L+ +S T P A +F WVF V+P +RKTG+Y +
Sbjct: 86 MRIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGTYGI 134
>gi|187732643|ref|YP_001880699.1| putative antirepressor protein encoded by prophage CP-933N
[Shigella boydii CDC 3083-94]
gi|187429635|gb|ACD08909.1| putative antirepressor protein encoded by prophage CP-933N
[Shigella boydii CDC 3083-94]
Length = 192
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGIQK 65
F+S +R +V + + WFVAKDV AL NS A+ + KGV Y T GG Q
Sbjct: 30 FDSVNVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTY---TPGGNQN 85
Query: 66 VRIISEPDVYRLLVKS---TLPS--AQKFERWVFEEVLPTLRKTGSYSV 109
+RIISE Y+L+ +S T P A +F WVF V+P +RKTG+Y +
Sbjct: 86 MRIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGTYGI 134
>gi|325171055|ref|YP_004251030.1| putative antirepressor protein [Vibrio phage ICP1]
gi|323512450|gb|ADX87905.1| putative antirepressor protein [Vibrio phage ICP1]
gi|323512681|gb|ADX88135.1| phage associated-antirepressor [Vibrio phage ICP1_2006_D]
gi|323512909|gb|ADX88362.1| phage associated-antirepressor [Vibrio phage ICP1_2006_C]
gi|323513137|gb|ADX88589.1| phage associated-antirepressor [Vibrio phage ICP1_2006_B]
gi|323513364|gb|ADX88815.1| phage associated-antirepressor [Vibrio phage ICP1_2006_A]
gi|323513596|gb|ADX89046.1| phage associated-antirepressor [Vibrio phage ICP1_2005_A]
gi|323513823|gb|ADX89272.1| phage associated-antirepressor [Vibrio phage ICP1_2001_A]
Length = 242
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGI-------QKVRIISEPDVYRL 77
F+A +V+ LGY+ + AHCK + K P + G+ Q + I E DVYR+
Sbjct: 27 FIANEVSDILGYKQHKDG-RAHCKSLIKLSLPDLRKLGLESLATNPQGIIICPEKDVYRM 85
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+++S LP A++F+ WV EEVLPT+RKTG + + ++ T
Sbjct: 86 VMRSNLPKAEEFQDWVMEEVLPTIRKTGGFVSDVDQIIDT 125
>gi|70731107|ref|YP_260848.1| phage protein [Pseudomonas fluorescens Pf-5]
gi|68345406|gb|AAY93012.1| probable phage protein YPO2126 [Pseudomonas fluorescens Pf-5]
Length = 294
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-----------KG 50
+ + F F ++RT++ DQ WFVA DV +L N + A+N KG
Sbjct: 6 TNVISFNFGKQQVRTLLIDDQP-WFVAADVCVSLAIGNVSLAVNGRADRETDGLDEDEKG 64
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+A + T G Q++ +++E +Y L+ KS A++F++WV EVLP +RK G Y
Sbjct: 65 IA---TVNTPSGAQEMLVVNESGLYALIFKSRKAEAKRFKKWVTAEVLPAIRKHGRY 118
>gi|126011070|ref|YP_001039895.1| putative antirepressor [Streptococcus phage phi3396]
gi|124389339|gb|ABN10781.1| putative antirepressor [Streptococcus phage phi3396]
Length = 251
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI--- 63
F F K+RT+ ++ +FV KDVA LGY NSN+A+ H K+ K++
Sbjct: 5 FNFNGQKVRTLTINNEP-YFVGKDVADVLGYTNSNDALKNHVDSDDKQILQKSQNATLEI 63
Query: 64 --QKVRIISEPDVYRLLVKSTLPSA--------QKFERWVFEEVLPTLRKTGSY 107
+ V II+E VY L+ + SA QKF+RWV EVLP +RK G Y
Sbjct: 64 PNRGVTIITESGVYNLIFAAAKQSANPEIKEKAQKFKRWVTSEVLPQIRKQGLY 117
>gi|19745462|ref|NP_606598.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|21910223|ref|NP_664491.1| putative antirepressor - phage associated [Streptococcus pyogenes
MGAS315]
gi|28876152|ref|NP_795379.1| hypothetical protein SpyM3_0687 [Streptococcus pyogenes phage
315.1]
gi|28896075|ref|NP_802425.1| antirepressor (phage associated) [Streptococcus pyogenes SSI-1]
gi|19747577|gb|AAL97097.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|21904417|gb|AAM79294.1| putative antirepressor - phage-associated [Streptococcus pyogenes
phage 315.1]
gi|28811325|dbj|BAC64258.1| putative antirepressor (phage associated) [Streptococcus pyogenes
SSI-1]
Length = 239
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK- 65
F F K+RT+ ++ +FV KDVA LGY+N +AI H K + G +
Sbjct: 5 FNFNGQKVRTLTINNEP-YFVGKDVADVLGYQNPQKAIRDHVDFDDKLTEQIVQSGQNRE 63
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y L++ S L A++F+RWV EVLP +RK G+Y
Sbjct: 64 MIIINESGLYSLILSSKLQQAKEFKRWVTSEVLPQIRKQGAY 105
>gi|167463768|ref|ZP_02328857.1| phage antirepressor protein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 234
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R I+ KD W++AKD+ + L + + + A+ + L
Sbjct: 1 MNQLQVFNFTGKDVRVIM-KDGQPWWLAKDICSVLDHSDVSMAVKRLDEDEKLTQTLFVS 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + V ++EP +Y L++ S P A++F+RWV EVLP +RKTG Y+ +
Sbjct: 60 GQNRNVWFVNEPGLYSLILTSRKPEAKQFKRWVTHEVLPAIRKTGMYATD 109
>gi|78357837|ref|YP_389286.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220242|gb|ABB39591.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 15 RTIVDKDQNIWFVAKDVATALGYE--NSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
RTIVD+D +WFVA DV LG + +S ++ K R L + G + + II+EP
Sbjct: 29 RTIVDEDGELWFVAMDVCKHLGLKPRDSVRYLDDDMKKHLPRTALGMKPG-KPLLIINEP 87
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+Y L+ +S P A F+ WV +EVLP++RK G+Y + P
Sbjct: 88 GLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKP 127
>gi|154486258|ref|ZP_02027665.1| hypothetical protein BIFADO_00061 [Bifidobacterium adolescentis
L2-32]
gi|154084121|gb|EDN83166.1| hypothetical protein BIFADO_00061 [Bifidobacterium adolescentis
L2-32]
Length = 263
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN--EAI---------NAHCKG 50
+ I F+F+ +R + + WFVAKD LG + ++ EA+ N+
Sbjct: 3 TEIQRFDFKGESLRALTNMAGEPWFVAKDACDILGIDTNHLREALDDDEITNLRNSEVWN 62
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R PL IISEP +Y+L+++S P A++F+RWV EVLP++RK G+Y +
Sbjct: 63 QPGRAPL----------IISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQ 112
Query: 111 APKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+A TS ++++ L+E +Q +K+ + K T + D L D L
Sbjct: 113 QTLDKALTSPDFLIQLATKLKE--EQEKVKELEPKAKALDDFTNVP--DALLVRDAAKLL 168
Query: 170 SSDNDEYLTITQIGE 184
S+D++ QIGE
Sbjct: 169 SNDSN-----IQIGE 178
>gi|22549522|ref|NP_689295.1| BRO-E [Mamestra configurata NPV-B]
gi|22476701|gb|AAM95107.1| BRO-E [Mamestra configurata NPV-B]
Length = 349
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----PLKTEGGIQKVR-- 67
I TI D WF AK+ A+ +GYE + I+ K K+Y L+ G
Sbjct: 21 IETIDDDKVQFWFAAKEFASCMGYERPDLVISKVDKNYQKKYEQFYDLRLTGITSSTHPH 80
Query: 68 --IISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEA 111
++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 81 TVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKIDT 128
>gi|294836533|ref|ZP_06781216.1| gp54 protein [Acinetobacter sp. 6013113]
gi|294860016|ref|ZP_06797785.1| gp54 protein [Acinetobacter sp. 6013150]
Length = 118
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
Y T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKTGSYS
Sbjct: 4 YHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKTGSYSA 58
>gi|167463798|ref|ZP_02328887.1| putative phage antirepressor protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383795|ref|ZP_08057546.1| hypothetical protein PL1_1715 [Paenibacillus larvae subsp. larvae
B-3650]
gi|322384421|ref|ZP_08058106.1| hypothetical protein PL1_2765 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321150751|gb|EFX44212.1| hypothetical protein PL1_2765 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152007|gb|EFX44950.1| hypothetical protein PL1_1715 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 250
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R I+ KD W++AKD+ + L + + + A+ + L
Sbjct: 1 MNQLQVFNFTGKDVRVIM-KDGQPWWLAKDICSVLDHSDVSMAVKRLDEDEKLTQTLFVS 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + V ++EP +Y L++ S P A++F+RWV EVLP +RKTG Y+ +
Sbjct: 60 GQNRNVWFVNEPGLYSLILTSRKPEAKQFKRWVTHEVLPAIRKTGMYATD 109
>gi|148368936|ref|YP_001257066.1| bro-6 [Spodoptera litura granulovirus]
gi|147883449|gb|ABQ52058.1| bro-6 [Spodoptera litura granulovirus]
Length = 485
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 23/124 (18%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCK--------GVAKRYPLKTEGGIQKVRI- 68
V+KD+ + +A LGY+N+ +AI H K VA R T Q V +
Sbjct: 22 VEKDK-FMYGGHGIAEFLGYKNTRDAIQKHVKPQWKTTWESVANRDSFVTSS--QPVNLP 78
Query: 69 ---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
ISE VY L+++S LP+A++F+RW+FEEVLP LRKTG Y+++ + A+S
Sbjct: 79 VNWHPHTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRKTGKYNIQDQQ--ASSG 136
Query: 120 STVL 123
+ ++
Sbjct: 137 TDII 140
>gi|281422525|ref|ZP_06253524.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281403447|gb|EFB34127.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 288
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-------AHCKGVAKRYPLKTEGG 62
E KIRT+ D++ F AKD+ LGY+ S A+N A +GV L+ +G
Sbjct: 26 EFGKIRTLTDENGEPLFCAKDLCDILGYKKSRNAVNQLVNHLDALKQGVKVSGSLRKDGS 85
Query: 63 ----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q++ ++E Y L++ S L +A KF+ WV +VLP +RKTG Y P S
Sbjct: 86 RTVRTQQMIFVNESGFYALVLGSKLSTAVKFKNWVTADVLPQIRKTGGY---IPVQPGES 142
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
+R H EE+ + A LK+ + LLK R
Sbjct: 143 DEETIR---HAEEILR-ATLKEKENLLKKQR 169
>gi|254466455|ref|ZP_05079866.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
gi|206687363|gb|EDZ47845.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
Query: 1 MSTIT-------PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK 53
M+TIT F+F + ++R +V +D + WFVAKDV ALG N + A+ + +
Sbjct: 1 MNTITKIIAETQSFDFNTKQVR-VVSRDGSPWFVAKDVCDALGIGNPSMAVASLEE---D 56
Query: 54 RYPLKT-EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L T EG + +ISE +Y L+ +S A+ F +WV VLP +RKTGSY
Sbjct: 57 EVTLSTIEGSHRPTNLISESGLYALIFQSRKAEAKAFRKWVTSTVLPAIRKTGSY 111
>gi|289706266|ref|ZP_06502628.1| toxin-antitoxin system, toxin component, Bro family [Micrococcus
luteus SK58]
gi|289556989|gb|EFD50318.1| toxin-antitoxin system, toxin component, Bro family [Micrococcus
luteus SK58]
Length = 261
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 1 MSTITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ +TPF++ + +RT ++D + + FVA D+ L +A + KR L
Sbjct: 1 MTALTPFQYGATAVRTAVIDGEPH--FVAADLCAVLEIGRQQDATR-YLDADEKRGCLVD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
T G Q + +++E +Y L+++S P A+ F+RW+ EVLP +RKTG+YSV+
Sbjct: 58 TPSGPQTMVVVTEAGMYSLVLRSRKPEAKAFKRWLTHEVLPAIRKTGAYSVQ 109
>gi|312872362|ref|ZP_07732432.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2062A-h1]
gi|311092185|gb|EFQ50559.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2062A-h1]
Length = 254
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-----YPLK 58
I F FE+N+IR + + D +FV KDVA LGY N ++A+ H K L
Sbjct: 7 IQIFNFENNEIRAL-NIDDKPYFVGKDVADILGYANPSKALADHVDEEDKLNNDSLLSLG 65
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
GG +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y +
Sbjct: 66 QRGG----WLINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVYMTD 113
>gi|281422299|ref|ZP_06253298.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281403620|gb|EFB34300.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 335
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-------AHCKGVAKRYPLKTEGG 62
E KIRT+ D++ F AKD+ LGY+ S A+N A +GV L+ +G
Sbjct: 26 EFGKIRTLTDENGEPLFCAKDLCDILGYKKSRNAVNQLVNHLDALKQGVKVSGSLRKDGT 85
Query: 63 IQKVR----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
K R ++E Y L++ S L +A KF+ WV +VLP +RKTG Y P S
Sbjct: 86 PSKRRQQMIFVNESGFYALVLGSKLSTAVKFKNWVTADVLPQIRKTGGYIPVQP---GES 142
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
+R H EE+ + A LK+ + LLK R
Sbjct: 143 DEETIR---HAEEILR-ATLKEKENLLKKQR 169
>gi|270598466|ref|ZP_06221528.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270318313|gb|EFA29482.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 194
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 13/116 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLK 58
S ++ F FESN IRT+V ++ WFVAKDV L N ++A+ + K +
Sbjct: 5 SQLSTFNFESNSIRTLVINNEP-WFVAKDVCDTLKISNVSDALLKLDDDEKATIGLTDSQ 63
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q + IISE +Y L++ K ++P +F +WV EVLP +RKTG Y
Sbjct: 64 AGNGAQSISIISESGMYTLILRCRDAVKKGSIP--HRFRKWVTAEVLPAIRKTGKY 117
>gi|118466591|ref|YP_880110.1| gp54 protein [Mycobacterium avium 104]
gi|118167878|gb|ABK68775.1| gp54 protein [Mycobacterium avium 104]
Length = 262
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYP 56
MS + F + ++R I D D + WFV D+ L N+ + + KGV +
Sbjct: 1 MSAVELFTYAGGYQVRVIRDDDGDPWFVLADLCRVLDIRNARDVAARLADDQKGVDQ--- 57
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ T GG Q++ ++SE +Y ++++S A F RWV EVLP +RKTG+YS
Sbjct: 58 VDTPGGRQQMTLVSEAGMYEVVIRSDKSEAVSFRRWVTGEVLPAIRKTGTYS 109
>gi|66395673|ref|YP_240038.1| ORF017 [Staphylococcus phage 47]
gi|282905889|ref|ZP_06313744.1| antirepressor [Staphylococcus aureus subsp. aureus Btn1260]
gi|282919256|ref|ZP_06326991.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|284024541|ref|ZP_06378939.1| hypothetical protein Saura13_08120 [Staphylococcus aureus subsp.
aureus 132]
gi|62636097|gb|AAX91208.1| ORF017 [Staphylococcus phage 47]
gi|282317066|gb|EFB47440.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|282331181|gb|EFB60695.1| antirepressor [Staphylococcus aureus subsp. aureus Btn1260]
Length = 258
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT+ D +FV KDVA LGY N+ +A++ H K
Sbjct: 1 MQALQTFNFEELPVRTLT-VDNEPYFVGKDVAEILGYSNTRDALSKHVDEDDKEILTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ ++
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATDS 115
>gi|20069910|ref|NP_613114.1| BRO-c [Mamestra configurata NPV-A]
gi|20043304|gb|AAM09139.1| BRO-c [Mamestra configurata NPV-A]
Length = 486
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 31 VATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-------------------VRIISE 71
VA LGY A+ H K ++ K +G + + ISE
Sbjct: 34 VAQFLGYVKPRNALQQHVKPAWRKNWEKIKGALNQGPLMTSLNQDNIPVNWQPNTVFISE 93
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEE 131
VY L+++S LP+A +F W+FEEVLP LRKTG YSV+ ++ +S++ ++ K L E
Sbjct: 94 AGVYALIMRSKLPAADEFRSWLFEEVLPELRKTGKYSVQ-DNVKQSSSTKIVNYDKKLAE 152
Query: 132 LAKQAGLKDNQLLLKVNRGVTKITGVD 158
A ++ +L LK++ T I D
Sbjct: 153 ----AQMEAMKLKLKLSEAHTTIAKCD 175
>gi|303257617|ref|ZP_07343629.1| toxin-antitoxin system, toxin component, Bro family
[Burkholderiales bacterium 1_1_47]
gi|302859587|gb|EFL82666.1| toxin-antitoxin system, toxin component, Bro family
[Burkholderiales bacterium 1_1_47]
Length = 290
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLK 58
MS F FE + T++ D + FVAK V + LG+++ A+ AH + + K L
Sbjct: 1 MSNALSFTFERGSL-TVLGDDLSPLFVAKQVCSFLGFKDPINAVKAHVDPEDLCKVEMLD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Q V ++E +Y L+ S LP A++F+RWV EVLP +RK G YS +
Sbjct: 60 RLNRKQLVNCVNESGLYALIFGSKLPKAKQFKRWVTNEVLPAIRKQGCYSAQ 111
>gi|292491103|ref|YP_003526542.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579698|gb|ADE14155.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 351
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 7 FEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGI 63
F+F+ S +R IV + + WF +DV L + + ++ GV K + + G
Sbjct: 113 FQFQQSYPVRVIVLEGEP-WFCLRDVCDVLEIKQPTKVVSTQLNEDGVNKIHVTDSLGRN 171
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE--APKLRATSA 119
Q+ ISEP++YR++ +S A++F+ WVFEEVLP +RKTG Y P+ R +SA
Sbjct: 172 QETWFISEPNLYRVIFRSNKKEARQFQDWVFEEVLPAIRKTGRYDAHDFEPEPRLSSA 229
>gi|330719224|ref|ZP_08313824.1| putative antirepressor - phage associated protein [Leuconostoc
fallax KCTC 3537]
Length = 160
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPL---KTEG 61
F+ +R ++ +++ W VA+DV A+GY NS +AI H KGV K L G
Sbjct: 13 FDDVPVRAVLLQNKT-WLVARDVTKAMGYSNSRQAIKNHVSKLDKGVTKIDTLTNGSVGG 71
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G+Q+ II+E L++ S P A+KF+R++ EV+P + +TG Y
Sbjct: 72 GLQEATIINESGFNALILHSKKPKAKKFQRFITSEVIPQILRTGKY 117
>gi|269119942|ref|YP_003308119.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
gi|268613820|gb|ACZ08188.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
Length = 236
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E K+RT++ +++ +WFV D+ L N + I + ++ L + GI II
Sbjct: 11 EFGKVRTVLIENE-VWFVLIDICKILELSNPSSVIKRLDEDEVTKFDLGSLSGI--TNII 67
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPK-LRATSASTVLRVHK 127
+E +Y+++ +S P A +F +WV +VLP+LRKTGSYS+ + PK L L+ +
Sbjct: 68 NESGLYKVIFRSDKPQANQFTKWVTHDVLPSLRKTGSYSINQTPKELELKEKEIQLKTAE 127
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN 187
L +A + + + +L N TK+ D L LP Y + T+IG+ LN
Sbjct: 128 FLNNMADSILIPEYKQIL--NAHATKVLTGDFLLP-----LPVVGEITY-SATEIGKMLN 179
>gi|270692868|ref|ZP_06222953.1| hypothetical protein HAINFHK1212_1303 [Haemophilus influenzae
HK1212]
gi|270316010|gb|EFA28052.1| hypothetical protein HAINFHK1212_1303 [Haemophilus influenzae
HK1212]
Length = 169
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 15/93 (16%)
Query: 25 WFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV-- 79
WFVAKDV A+G +N+ +A+ A KGV Y L GG Q++ IISE +Y L++
Sbjct: 10 WFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTL---GGQQEMNIISESGMYTLILRC 66
Query: 80 -----KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K ++P +F +WV EVLPT+RKTG Y
Sbjct: 67 RDAVKKGSIP--HRFRKWVTAEVLPTIRKTGKY 97
>gi|298253797|ref|ZP_06977386.1| prophage antirepressor [Gardnerella vaginalis 5-1]
gi|297532133|gb|EFH71106.1| prophage antirepressor [Gardnerella vaginalis 5-1]
Length = 263
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-VRIISEPDVYRLLVKSTL 83
+FV KDVA LGY ++++A+ H K T+ G + + +I+E +Y L+++S L
Sbjct: 25 YFVGKDVAEILGYRDTSDALKRHVDEDDKLTRCFTDSGQNREMYVINESGLYSLILRSQL 84
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLK 139
P A +F+RWV +VLP++RK G Y+ + A V K EE AK+ L+
Sbjct: 85 PKACQFKRWVTSQVLPSIRKHGMYATDELINNPDMAIAVFNALK--EERAKREALE 138
>gi|170719065|ref|YP_001784220.1| prophage antirepressor [Haemophilus somnus 2336]
gi|168827194|gb|ACA32565.1| prophage antirepressor [Haemophilus somnus 2336]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPLKTEGG 62
I+ F F+S +R V + +F DVA+ LG N S + +GV K T G
Sbjct: 5 ISTFNFKSFPVRIHVLGSEP-FFCLLDVASVLGLCNRSVSKFKFNPQGVEK-LSTPTTSG 62
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Q++ I+EP++YR++ +S P A +F+ WVFEEVLP +RKTG Y ++
Sbjct: 63 DQEMIFINEPNLYRVIFRSNKPEAVEFQNWVFEEVLPQIRKTGKYQLK 110
>gi|270702410|ref|ZP_06223066.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270315833|gb|EFA27940.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 15/93 (16%)
Query: 25 WFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV-- 79
WFVAKDV A+G +N+ +A+ A KGV Y L GG Q++ IISE +Y L++
Sbjct: 22 WFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTL---GGQQEMNIISESGMYTLILRC 78
Query: 80 -----KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K ++P +F +WV EVLPT+RKTG Y
Sbjct: 79 RDAVKKGSIP--HRFRKWVTAEVLPTIRKTGKY 109
>gi|15923845|ref|NP_371379.1| anti-repressor [Staphylococcus aureus subsp. aureus Mu50]
gi|156979181|ref|YP_001441440.1| hypothetical protein SAHV_0850 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255005643|ref|ZP_05144244.2| hypothetical protein SauraM_04210 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14246624|dbj|BAB57017.1| similar to anti-repressor [Staphylococcus aureus subsp. aureus
Mu50]
gi|156721316|dbj|BAF77733.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 259
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT+ + D +F+ KDVA LGY N +A++ H K+
Sbjct: 1 MQALQTFNFEELPVRTL-EVDGEPYFIGKDVADILGYANGRDALSKHVDEDDKKVLTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ +
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKYGIYATD 114
>gi|164519328|ref|YP_001649115.1| BRO-H [Helicoverpa armigera granulovirus]
gi|163869514|gb|ABY47824.1| BRO-H [Helicoverpa armigera granulovirus]
Length = 463
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 26/147 (17%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-------------------V 66
+ VA +LGY+ AI H K ++ + +G + +
Sbjct: 29 YAGHGVAESLGYKKPRNAILTHVKPEWRKTWAEIKGALNQGFLVTSSNETQLPANWQPNT 88
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + A+ ++T++
Sbjct: 89 VFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSEA---ASKSTTIVHYD 145
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTK 153
K L E A +++ QL L +++ V K
Sbjct: 146 KKLAE----AQIENLQLKLDLSQTVAK 168
>gi|184153732|ref|YP_001842073.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|183225076|dbj|BAG25593.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
Length = 257
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---VAKRYPLKTEGGI 63
F F ++RT+ D+ +F+ +D+ L Y N +AI H + +R L G
Sbjct: 7 FNFHGQQVRTMTLNDEP-YFIGRDLTAILQYSNGPKAIRDHVDADDKLTERIVLA--GQH 63
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++V +I+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y
Sbjct: 64 REVTLINESGLYSLILGSKLPTAKEFKHWVTSEVLPAIRKHGAY 107
>gi|28557094|dbj|BAC57553.1| antirepressor protein [Clostridium sordellii]
Length = 187
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 13/95 (13%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKV----------RIISEP 72
+F A +A LGY N ++A+ HC+ GV + + E G K + I E
Sbjct: 22 YFDAIPIAKTLGYSNPHDALMRHCQKEGVV-FHEVGVETGKYKSGDAIMQFVSKKFIDEG 80
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++YRL++KS L +KFE WVFEEVLPT+RK G Y
Sbjct: 81 NLYRLILKSKLKKVRKFEMWVFEEVLPTIRKHGEY 115
>gi|148544366|ref|YP_001271736.1| phage antirepressor protein [Lactobacillus reuteri DSM 20016]
gi|227363210|ref|ZP_03847343.1| phage antirepressor protein [Lactobacillus reuteri MM2-3]
gi|325681629|ref|ZP_08161150.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|325682686|ref|ZP_08162202.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|148531400|gb|ABQ83399.1| phage antirepressor protein [Lactobacillus reuteri DSM 20016]
gi|227071750|gb|EEI10040.1| phage antirepressor protein [Lactobacillus reuteri MM2-3]
gi|324977036|gb|EGC13987.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|324979094|gb|EGC16040.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
Length = 267
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---VAKRYPLKTEGGI 63
F F ++RT+ D+ +F+ +D+ L Y N +AI H + +R L G
Sbjct: 17 FNFHGQQVRTMTLNDEP-YFIGRDLTAILQYSNGPKAIRDHVDADDKLTERIVLA--GQH 73
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++V +I+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y
Sbjct: 74 REVTLINESGLYSLILGSKLPTAKEFKHWVTSEVLPAIRKHGAY 117
>gi|15617593|ref|NP_258393.1| hypothetical protein [Spodoptera litura NPV]
gi|15553329|gb|AAL01807.1|AF325155_119 hypothetical protein [Spodoptera litura NPV]
Length = 478
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 25/142 (17%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
+A LGY+ +AI H K G K+ PL T V + ISE
Sbjct: 34 IAEFLGYKLPAKAIRDHVKPAWRKNWEEIEGDLKQTPLVTSSAPVNVPVNWQPHTVFISE 93
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEE 131
VY L+++S LP+A++F+RW+FEEVLP LRK+G YS+E ++ + V+ K L +
Sbjct: 94 AGVYALIMRSKLPAAEEFQRWLFEEVLPELRKSGKYSIE-----TSNCTDVVNYEKQLAD 148
Query: 132 LAKQAGLKDNQLLLKVNRGVTK 153
A+ ++ L + N + K
Sbjct: 149 -AQMECMQKKLELSEANTAIAK 169
>gi|291544662|emb|CBL17771.1| Prophage antirepressor [Ruminococcus sp. 18P13]
Length = 273
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-----------PLKTEG 61
++RT+ D +FV KDVA LGY N N+AI H K+ L
Sbjct: 14 EVRTLT-IDSKPYFVGKDVAEILGYSNVNKAIQRHVDDEDKKTLDYKGFSHFGTTLWGSN 72
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
II+E +Y L++ S LP+A+KF+ WV ++LPT+R+ G+Y + +A ++
Sbjct: 73 DFSNKTIITESGLYSLILSSKLPTAKKFKHWVTADILPTIRQHGAYMTKDVLEKALTSPD 132
Query: 122 VLRVHKHLEELAKQAGLKDNQ 142
L +LA+Q LKD Q
Sbjct: 133 FLM------QLAQQ--LKDEQ 145
>gi|209401162|ref|YP_002274031.1| baculovirus repeated ORF d [Helicoverpa armigera NPV NNg1]
gi|209364414|dbj|BAG74673.1| baculovirus repeated ORF d [Helicoverpa armigera NPV NNg1]
Length = 501
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
VA ALGY+ A+ H K GV R+ L T ++ + I+E
Sbjct: 30 VAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNRHSLVTSSDSIELPLNWQPNTLFITE 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +T ST
Sbjct: 90 AGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRRQSSTDNST 139
>gi|154498735|ref|ZP_02037113.1| hypothetical protein BACCAP_02726 [Bacteroides capillosus ATCC
29799]
gi|150272275|gb|EDM99473.1| hypothetical protein BACCAP_02726 [Bacteroides capillosus ATCC
29799]
Length = 153
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E IR V+ D W V KDV+ ALGY N +AI H + + +I
Sbjct: 11 EFGAIRA-VEIDGEPWLVGKDVSLALGYTNPQKAIRDHVDAEDRTVNDSFTVNGTAITLI 69
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+E +Y L++ S LP A++F RWV EVLP++RK G+Y
Sbjct: 70 NESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRKHGAY 107
>gi|33331742|gb|AAQ11050.1| BRO-C [Mamestra configurata NPV-A]
Length = 486
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 31 VATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-------------------VRIISE 71
VA LGY A+ H K ++ K +G + + ISE
Sbjct: 34 VAQFLGYVKPRNALQQHVKPAWRKNWEKIKGALNQGPLMTSLNQDNIPVNWQPNTVFISE 93
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEE 131
VY L+++S LP+A +F W+FEEVLP LRKTG YSV+ ++ +S++ ++ + L E
Sbjct: 94 AGVYALIMRSKLPAADEFRSWLFEEVLPELRKTGKYSVQ-DNVKQSSSTEIVNYDRKLAE 152
Query: 132 LAKQAGLKDNQLLLKVNRGVTKITGVD 158
A ++ +L LK++ T I D
Sbjct: 153 ----AQMEAMKLKLKLSEAHTTIAKCD 175
>gi|114679899|ref|YP_758349.1| bro-c [Leucania separata nuclear polyhedrosis virus]
gi|39598630|gb|AAR28816.1| bro-c [Leucania separata nuclear polyhedrosis virus]
Length = 485
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 20/111 (18%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKV 66
V+KD+ + VA LGY+N+ +AI H K VA PL + V
Sbjct: 22 VEKDK-FMYGGHGVAQCLGYKNTRDAIQKHVKNQWKTTWENLMAVAIGDPLMKSSQLINV 80
Query: 67 --------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+E VY L+V+S LP+A+KF+ W+FEEVLP LR+TG Y +
Sbjct: 81 PPNWQPNTVFITEAGVYALIVRSKLPAAEKFQEWLFEEVLPELRRTGKYDL 131
>gi|317505859|ref|ZP_07963701.1| BRO family domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255839|gb|EFV15067.1| BRO family domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 316
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F++ IR I++ + WFV D++ ALG A GV + Y + + G +
Sbjct: 38 FDWNGYLIRVIMNHSEP-WFVLSDLSKALGLSRKPAATAERLDPDGVRQTYTIDSLGRKR 96
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
+V +I E +Y+L+++S P A++F+RW+ EVLP +R+TG Y P A S +
Sbjct: 97 QVTVIDESAMYQLVIRSDKPEAKEFQRWITREVLPQIRRTGMY---LPTTSADPYSVMRA 153
Query: 125 VHKHLEELAKQA 136
+ LE + ++A
Sbjct: 154 MLDQLESVDRKA 165
>gi|257793138|ref|YP_003186535.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479830|gb|ACV60146.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG- 61
T+ + FE ++IR ++ D+ W+VAKDV AL NS +A+ + K T+G
Sbjct: 11 TMMEWMFEGHRIRVVMINDEP-WWVAKDVCEALQIANSRDAV-SRLDEDEKNTVAITDGN 68
Query: 62 -GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G II+E +Y+L S + +A++F RW+ EVLP++RKTG Y
Sbjct: 69 RGNPNTTIINEAGLYQLTFTSRVDTAKRFRRWLAHEVLPSIRKTGEY 115
>gi|94995297|ref|YP_603395.1| phage antirepressor protein [Streptococcus phage 10750.4]
gi|94548805|gb|ABF38851.1| phage antirepressor protein [Streptococcus phage 10750.4]
Length = 212
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
W VAKD+ ALG + + AI+ KGV K L T+GG Q++ II+E D+YRL+ KS P
Sbjct: 29 WAVAKDITNALGLKQPSRAIST-LKGVTKSKTL-TKGGEQELSIINEKDIYRLVFKSRKP 86
Query: 85 SAQKFERWVFEEV 97
A+ F+ WVFE +
Sbjct: 87 EAEAFQEWVFETI 99
>gi|238898666|ref|YP_002924347.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|238899087|ref|YP_002924769.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466425|gb|ACQ68199.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466847|gb|ACQ68621.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 256
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 13/111 (11%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+TPF FES IR ++ ++ WF+A+D+ AL +N +A+ + + +G
Sbjct: 6 LTPFCFESFVIRVVIINNET-WFIAQDICCALQIQNVTQAVERLDDDERSMFNIGRQG-- 62
Query: 64 QKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+V IISE +Y L++ K TLP +F +WV EVLP +RKTG Y
Sbjct: 63 -QVNIISESGLYTLVLRCRDAVKKGTLP--HRFRKWVTHEVLPQIRKTGQY 110
>gi|228950519|ref|ZP_04112669.1| Phage antirepressor protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809155|gb|EEM55626.1| Phage antirepressor protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 253
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E ++RT+V K +++WFVAKDV L +N+ +A+ + + +G + II
Sbjct: 11 ELGQVRTVV-KGEDVWFVAKDVCEVLEIKNTTQAMQKLDPEERTMFNIGRQG---ETNII 66
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+E +Y L++ S P A+ F++WV EVLP++RK GSY
Sbjct: 67 NESGLYSLIMTSRKPQAKAFKKWVTSEVLPSIRKHGSY 104
>gi|273809579|ref|YP_003344817.1| putative antirepressor protein Ant [Aggregatibacter phage S1249]
gi|261410486|gb|ACX80317.1| putative antirepressor protein Ant [Aggregatibacter phage S1249]
Length = 289
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 16/116 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE---AINAHCKGVAKRYPLK 58
+ + F FES IRT+ ++ WFVAKDV A+ NS A++ KGV+ Y
Sbjct: 5 TQLCTFNFESKSIRTLAINNEP-WFVAKDVCDAINLTNSRMSLLALDDDEKGVSLIY--- 60
Query: 59 TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T G Q++ I+SE +Y L++ K ++P +F +WV EVLP +RKTG Y
Sbjct: 61 TPSGQQEMNIVSESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPAIRKTGKY 114
>gi|306828127|ref|ZP_07461390.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
gi|304429664|gb|EFM32710.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
Length = 247
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQK 65
F F K+RT+ ++ +FV KDVA LGY ++ AI +H K + G +
Sbjct: 5 FNFNGQKVRTLTINNEP-YFVGKDVADILGYARADNAIRSHVDDEDKLMHQFSASGQNRD 63
Query: 66 VRIISEPDVYRLLVKSTLPSA--------QKFERWVFEEVLPTLRKTGSY 107
+ I++E VY L+ + SA QKF+RWV EVLP +RK G+Y
Sbjct: 64 MTIVNESGVYNLIFAAAKQSANPEIKEKAQKFKRWVTSEVLPQIRKQGAY 113
>gi|289423917|ref|ZP_06425710.1| antirepressor [Peptostreptococcus anaerobius 653-L]
gi|289155694|gb|EFD04366.1| antirepressor [Peptostreptococcus anaerobius 653-L]
Length = 237
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 25 WFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
WF+ D+ L NS +A + GV + + G Q+ I+E ++Y+L+ +S
Sbjct: 25 WFMLNDICRVLEIGNSRQARTRLNQDGVITNDVIDSLGRTQQSTFINESNLYKLIFQSRK 84
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQ-AGLKDNQ 142
P A+KF WV EVLPTLRK G+YS+ A + +L V EEL + KDN
Sbjct: 85 PQAEKFSDWVTGEVLPTLRKQGTYSMPA---MSKELQAILMVDNKTEELREDFQDFKDNA 141
Query: 143 LLLKV 147
L +
Sbjct: 142 PLFNI 146
>gi|153806485|ref|ZP_01959153.1| hypothetical protein BACCAC_00749 [Bacteroides caccae ATCC 43185]
gi|149131162|gb|EDM22368.1| hypothetical protein BACCAC_00749 [Bacteroides caccae ATCC 43185]
Length = 255
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
WFVAKDV LG +AI + T GG+QK+ ++E +Y L+++S P
Sbjct: 63 WFVAKDVCDVLGISKYRDAIARLDDDEGCPIEVDTLGGMQKMAAVNESGLYTLILQSRKP 122
Query: 85 SAQKFERWVFEEVLPTLRKTGSYSVE 110
A+ F +WV EVLP++RK G Y ++
Sbjct: 123 EAKPFRKWVTSEVLPSIRKKGYYGIK 148
>gi|256828702|ref|YP_003157430.1| prophage antirepressor [Desulfomicrobium baculatum DSM 4028]
gi|256577878|gb|ACU89014.1| prophage antirepressor [Desulfomicrobium baculatum DSM 4028]
Length = 217
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 4 ITPFEFESNKIRT----IVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYP 56
IT F+F RT + D++ + WF+AKDV LG+ N ++A ++ K + P
Sbjct: 20 ITTFQFSLTTGRTLNVRVTDQNGDPWFIAKDVCDVLGFANPSDATKYLDEDEKALINN-P 78
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T V II+E +Y L+++S A++F++WV EVLP++RK G Y
Sbjct: 79 SLTANPNGNVTIINESGLYSLILRSRKAEAKRFKKWVTSEVLPSIRKHGGY 129
>gi|268589905|ref|ZP_06124126.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291314746|gb|EFE55199.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 198
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I+ FE ++R IV + WF+AKDV +ALG N ++A+NA + ++ + GI
Sbjct: 31 ISVIRFEGVQVR-IVKINNEPWFIAKDVCSALGITNPSKALNAL--DLDEKNTVTLSYGI 87
Query: 64 Q---KVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSV 109
Q ++I+E Y+L+ +S + A +F WVF +V+P++RKTG+Y V
Sbjct: 88 QGNPNRQVIAESGFYKLIARSRKATTKGTFAHRFTNWVFRDVIPSIRKTGAYGV 141
>gi|68304250|ref|YP_249718.1| BRO-D [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973079|gb|AAY84045.1| BRO-D [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 429
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
ISE VY L++KS LP+A++F+RW+FEEVLP LRKTG YS+ + + V+ +
Sbjct: 32 FISEAGVYALIMKSKLPAAEEFQRWLFEEVLPELRKTGKYSI-------PTTANVVNYDR 84
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
L E A ++ QL L++++ T I D
Sbjct: 85 QLAE----AQMESLQLKLELSQANTTIAKYD 111
>gi|282600715|ref|ZP_06257707.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571510|gb|EFB77045.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 310
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-------GGIQK 65
++RTI+ + WFVA DV AL N ++AI+ ++ L T GG Q
Sbjct: 66 EVRTILIGGEP-WFVAVDVCNALDIGNPSQAISKLDDD--EKVTLTTNEGHSGKLGGAQM 122
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ +ISE +Y L++KS P A+ F+RW+ EV+PT+RKTG Y ++
Sbjct: 123 LNVISEAGLYSLILKSRKPEAKAFKRWITHEVIPTIRKTGGYMTDS 168
>gi|310828999|ref|YP_003961356.1| phage antirepressor protein [Eubacterium limosum KIST612]
gi|308740733|gb|ADO38393.1| phage antirepressor protein [Eubacterium limosum KIST612]
Length = 306
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 7 FEFESNK-IRTIVDKDQN-----IWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
FE E+ K IRT+ + N IWFVA+DV ALG++++ AI H + AKR L
Sbjct: 15 FEHETFKRIRTLTEMSGNGGEPQIWFVARDVCAALGFKDAGHAIKRHVEREDTAKRRILD 74
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G +I+E +Y L + S LP+A++F+ +V +LP++ + G++
Sbjct: 75 PRGCHMPTTVINESGLYALSMGSRLPAARRFKHYVTSVILPSVCRHGAH 123
>gi|284921918|emb|CBG34993.1| putative prophage antirepressor [Escherichia coli 042]
Length = 192
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGIQK 65
F+ +R +V + + WFVAKDV AL NS A+ + KGV Y T GG Q
Sbjct: 30 FDGVDVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTY---TPGGNQN 85
Query: 66 VRIISEPDVYRLLVKS---TLPS--AQKFERWVFEEVLPTLRKTGSYSV 109
+ IISE Y+L+ +S T P A +F WVF V+P +RKTG+Y +
Sbjct: 86 MSIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGAYGI 134
>gi|260889381|ref|ZP_05900644.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
gi|260860792|gb|EEX75292.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
Length = 257
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 21/238 (8%)
Query: 4 ITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEG 61
+T FE E K+R +V +++ +F DV LG +N + + + KGV L T G
Sbjct: 5 LTVFENEKFGKVR-VVTENEKPYFNLNDVCEILGLKNPRQVKSRLNPKGVILVDTL-TSG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PKLRAT 117
G Q++ I+E ++Y+ + +S P A+ WV EVLPT+RKTG Y + P L
Sbjct: 63 GKQQMNFINESNLYKCIFQSDKPEAEAITEWVTGEVLPTIRKTGMYVTDELLNNPDLAIK 122
Query: 118 SASTV-------LRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIKH 167
+ + + +R+ K +EE A ++ + K + R ++KI + ++ + +
Sbjct: 123 AFTRLKEEQEKRMRLEKEIEEQAPAVAFANSLTVSKDCILVRELSKILKQNGIDVGETRL 182
Query: 168 LPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGG-YRPTPKGEERG 223
+ YL I+++G N P Q++ L ++K G ++S G TPK +G
Sbjct: 183 FEWLRQNGYL-ISKVGSDWNLPTQKSMNLGLFVIKEGTRMSTTEGSKITKTPKVTGKG 239
>gi|167746060|ref|ZP_02418187.1| hypothetical protein ANACAC_00755 [Anaerostipes caccae DSM 14662]
gi|167654575|gb|EDR98704.1| hypothetical protein ANACAC_00755 [Anaerostipes caccae DSM 14662]
Length = 265
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV-----RIISEPDVYRLLV 79
+FV +D+A LGY N+ +AI+ H + ++E ++ +I+E +Y L++
Sbjct: 25 YFVGRDIAEILGYSNTKDAISTHVDEEDRTVIQRSENTTLEIPNRGLTVINESGLYSLIL 84
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
S +P+A+KF+ WV EVLP +RK G ++V+
Sbjct: 85 SSKMPNAKKFKHWVTSEVLPAIRKHGVFAVD 115
>gi|148826895|ref|YP_001291648.1| putative antirepressor protein [Haemophilus influenzae PittGG]
gi|148718137|gb|ABQ99264.1| putative antirepressor protein [Haemophilus influenzae PittGG]
Length = 284
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 17/127 (13%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLK-- 58
++ F FE++ IR +V +Q WFVAKD+ LG N ++AI + K ++ LK
Sbjct: 8 LSTFNFENHSIRALVINNQP-WFVAKDLCDTLGITNPSKAILNLDDDEKMISTDSNLKLG 66
Query: 59 -TEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G Q + ++SE +Y L++ K ++P +F +WV EVLPT+RKTG Y ++
Sbjct: 67 SAGNGAQSLALVSESGMYTLILRCRDAVKKGSIP--HRFRKWVTSEVLPTIRKTGKYQLQ 124
Query: 111 APKLRAT 117
P+ + T
Sbjct: 125 -PQQKTT 130
>gi|317051657|ref|YP_004112773.1| BRO domain-containing protein [Desulfurispirillum indicum S5]
gi|316946741|gb|ADU66217.1| BRO domain protein [Desulfurispirillum indicum S5]
Length = 538
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGV--AKRYPLKTEG 61
F F ++RT++ D+ +WFVA D+A AL ++++ + + KGV G
Sbjct: 180 FHFGECEVRTVI-LDEQVWFVASDIAKALDFKHAPHMVRMLDDDEKGVHNVDTSSQNRHG 238
Query: 62 GIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I + + II+E +Y ++KS P A+KF RWV EVLP +RK G Y
Sbjct: 239 AISRQVELTIINESGLYNAILKSRKPEAKKFRRWVTSEVLPAIRKHGKY 287
>gi|163937954|ref|YP_001642839.1| prophage antirepressor [Bacillus weihenstephanensis KBAB4]
gi|163865809|gb|ABY46864.1| prophage antirepressor [Bacillus weihenstephanensis KBAB4]
Length = 256
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN------AHCKGVAKRYPLKTEGGI 63
E ++RT+V K +++WFVAKDV L N+ +++ H VA G +
Sbjct: 11 EFGQVRTVV-KGKDVWFVAKDVCDVLEIVNATRSLSRLDEDELHSMKVADSL-----GRL 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q+ II+E +Y +++ S P A+ F++WV EVLP++RK G+Y
Sbjct: 65 QETNIINESGLYSIIMTSRKPQAKAFKKWVTSEVLPSIRKHGAY 108
>gi|9635381|ref|NP_059279.1| ORF131 [Xestia c-nigrum granulovirus]
gi|6175775|gb|AAF05245.1|AF162221_131 ORF131 [Xestia c-nigrum granulovirus]
Length = 442
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 26/147 (17%)
Query: 26 FVAKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKV-------- 66
++ +A ++GY N +AI H + R PL T +
Sbjct: 8 YMGHSIAKSVGYANPQKAIRDHVRPEWRKTWSEIVDGTNRSPLVTSFNDSHLPANWQPNT 67
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + + +AST +
Sbjct: 68 VFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDM------SEAASTSTEIV 121
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTK 153
+ ++LA +A +++ QL L +++ V K
Sbjct: 122 NYDKKLA-EAQIENLQLKLDLSQTVAK 147
>gi|18138296|ref|NP_542731.1| bro [Helicoverpa zea SNPV]
gi|10442560|gb|AAG17373.1|AF275264_7 Orf60-like protien [Helicoverpa zea SNPV]
gi|18028678|gb|AAL56114.1|AF334030_39 ORF108 [Helicoverpa zea SNPV]
Length = 501
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
VA ALGY+ A+ H K GV ++ L T ++ + I+E
Sbjct: 30 VAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSIEMPLNWQPNTLFITE 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +T ST
Sbjct: 90 AGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRRQSSTDNST 139
>gi|148368932|ref|YP_001257062.1| bro-4 [Spodoptera litura granulovirus]
gi|147883445|gb|ABQ52054.1| bro-4 [Spodoptera litura granulovirus]
Length = 471
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----------RYPLKTEGGIQKV 66
V+KD+ + +A LGY+ ++AI H K K + PL T V
Sbjct: 22 VEKDK-FMYGGHGIAEFLGYKQPDKAIRDHVKKQWKCKFNDLKVQLNQPPLVTSSTPVNV 80
Query: 67 RI--------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ ISE VY L+++S LP+A++F+RW+FEEVLP LR++G YSVE
Sbjct: 81 PVNWQPHTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRRSGKYSVE 132
>gi|23501961|ref|NP_698088.1| BRO family protein [Brucella suis 1330]
gi|23347908|gb|AAN30003.1| BRO family protein [Brucella suis 1330]
Length = 134
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 5 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 59
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV + VLP +RK G Y
Sbjct: 60 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTQVVLPAIRKDGMY 110
>gi|71909133|ref|YP_286720.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71848754|gb|AAZ48250.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 199
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+RT+ KD + WFVAKD+A LGY ++ + L T GG Q+ IISE
Sbjct: 26 VRTVA-KDGSTWFVAKDIADILGYRDAANMARNLDDDEKDTHNLSTLGGEQEALIISESG 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELA 133
++ +++S A+ F +WV VLP++R+ G Y+ L + V+ +H+ + E A
Sbjct: 85 LFAAILRSRRKEAKDFRKWVTSVVLPSIRQHGGYAKGQEDL---PEALVINLHRKIRENA 141
Query: 134 KQA 136
A
Sbjct: 142 MPA 144
>gi|251779570|ref|ZP_04822490.1| antirepressor, phage associated [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083885|gb|EES49775.1| antirepressor, phage associated [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 270
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI-------ISEPDVYRLL 78
F+ KDVA ALGY + A++ H KR K G I + I I+E +Y L+
Sbjct: 27 FIGKDVAAALGYCDPKSAVSNHVDKEDKRIIQK--GQITTLEIPNRGLTVINESGLYSLI 84
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ S L A+KF+RWV EVLP++RK+G Y
Sbjct: 85 LSSKLQCAKKFKRWVTSEVLPSIRKSGGY 113
>gi|12597590|ref|NP_075174.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483856|gb|AAG53848.1|AF271059_105 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 501
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
VA ALGY+ A+ H K GV ++ L T ++ + I+E
Sbjct: 30 VAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSIEMPLNWQPNTLFITE 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +T ST
Sbjct: 90 AGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRQQSSTDNST 139
>gi|15426361|ref|NP_203661.1| bro-c [Helicoverpa armigera NPV]
gi|15384437|gb|AAK96348.1|AF303045_90 bro-c [Helicoverpa armigera NPV]
Length = 501
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 19/110 (17%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
VA ALGY+ A+ H K GV ++ L T ++ + I+E
Sbjct: 30 VAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSIELPLNWQPNTLFITE 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +T ST
Sbjct: 90 AGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRQQSSTDNST 139
>gi|187476908|ref|YP_784932.1| hypothetical protein BAV0402 [Bordetella avium 197N]
gi|187477929|ref|YP_785953.1| antirepressor [Bordetella avium 197N]
gi|115421494|emb|CAJ48003.1| phage-related protein [Bordetella avium 197N]
gi|115422515|emb|CAJ49040.1| Putative antirepressor [Bordetella avium 197N]
Length = 249
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG--- 61
T F FES+ +R +V + WF+A D+ AL N +E++ A K TEG
Sbjct: 13 TAFNFESHVVRVVVINGEP-WFIAADLCKALKLSNPSESLKA-LDDDEKMTLSSTEGHSG 70
Query: 62 ---GIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
G Q +ISE +Y L+++ TLP +F +WV EVLPT+RKTGSY
Sbjct: 71 KRGGAQFQSVISESGMYTLVLRCRDAVKPGTLP--HRFRKWVTAEVLPTIRKTGSY 124
>gi|9635310|ref|NP_059208.1| ORF60 [Xestia c-nigrum granulovirus]
gi|6175704|gb|AAF05174.1|AF162221_60 ORF60 [Xestia c-nigrum granulovirus]
Length = 484
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 26 FVAKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVR------- 67
++ +A ++GY N +AI H + R PL T +
Sbjct: 29 YMGHSIAKSVGYANPQKAIRDHVRPEWRKTWSEIVDGTNRSPLVTSFNDSHLPANWQPNT 88
Query: 68 -IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + + +AST +
Sbjct: 89 VFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDM------SEAASTSTEIV 142
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
+ ++LA +A + +L L+++ T I D
Sbjct: 143 NYDKKLA-EAQMDAMRLKLELSEANTTIAKYD 173
>gi|292397742|ref|YP_003517808.1| BRO-D [Lymantria xylina MNPV]
gi|291065459|gb|ADD73777.1| BRO-D [Lymantria xylina MNPV]
Length = 330
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 26 FVAKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRIISEPDV 74
+ +A LGY+ +I H K VA L V ISE V
Sbjct: 29 YSGSSIAEFLGYKCPKNSIRDHVKPKWKTTWEEIKNVATEIQLPPNWQPNTV-FISEAGV 87
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAK 134
Y L+++S LP+A++F+RW+FE+VLP LRKTG Y V K + S + ++ K +
Sbjct: 88 YALIMRSKLPAAEEFQRWLFEKVLPELRKTGKYDV---KNQQQSTTEIVNYEKRFAD--- 141
Query: 135 QAGLKDNQLLLKVNRGVTKITGVD 158
A ++ QL LK++ T I D
Sbjct: 142 -AQMESLQLKLKLSEANTAIAKYD 164
>gi|89152443|ref|YP_512277.1| putative anti-immunity protein [Escherichia phage phiV10]
gi|74055466|gb|AAZ95915.1| putative anti-immunity protein [Escherichia phage phiV10]
Length = 194
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 7 FEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGG 62
F FES IR IV + WF+A DV A+G N +A+ + KGVA T GG
Sbjct: 10 FSFESQADIRVIVINGEP-WFIASDVCRAIGIANHRDAVRKLDDDEKGVAS---TDTPGG 65
Query: 63 IQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
Q+ IISE +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 66 EQESIIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 115
>gi|66394686|ref|YP_240864.1| ORF016 [Staphylococcus phage X2]
gi|62636910|gb|AAX92021.1| ORF016 [Staphylococcus phage X2]
Length = 235
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSY 107
G + + II+E +Y L+ ++ S A+KF+RWV EVLP+LR+TG+Y
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPSLRRTGTY 115
>gi|256369511|ref|YP_003107021.1| BRO family, N-terminal domain protein [Brucella microti CCM 4915]
gi|255999673|gb|ACU48072.1| BRO family, N-terminal domain protein [Brucella microti CCM 4915]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 130
>gi|41189525|ref|NP_958629.1| 77ORF010 [Staphylococcus phage 77]
gi|40557226|gb|AAR87882.1| 77ORF010 [Staphylococcus phage 77]
Length = 265
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 112/257 (43%), Gaps = 41/257 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY SN AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARSNNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYS--- 108
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 109 -VEAPKLRATSASTVLRVHKHLEE-----------------LAKQAGLKDNQLLLKVNRG 150
+E TVL +K +E A DN +L+
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQNLLLQQQVEVNKPKVLFADSVAGSDNSILVGELAK 179
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGL----- 204
+ K GVD + K L N+ YL I + GE N P Q++ L L +K+ +
Sbjct: 180 ILKQNGVDIGQNRLFKWLR---NNGYL-IKKSGESYNLPTQKSMDLKILDIKKRIINNPD 235
Query: 205 QVSKVSGGYRPTPKGEE 221
SKVS + T KG++
Sbjct: 236 GSSKVSRTPKVTGKGQQ 252
>gi|237815507|ref|ZP_04594504.1| BRO family, N-terminal domain protein [Brucella abortus str. 2308
A]
gi|260546553|ref|ZP_05822292.1| BRO family protein [Brucella abortus NCTC 8038]
gi|260754826|ref|ZP_05867174.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|260758043|ref|ZP_05870391.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|260761869|ref|ZP_05874212.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|297248400|ref|ZP_06932118.1| BRO family protein [Brucella abortus bv. 5 str. B3196]
gi|237788805|gb|EEP63016.1| BRO family, N-terminal domain protein [Brucella abortus str. 2308
A]
gi|260095603|gb|EEW79480.1| BRO family protein [Brucella abortus NCTC 8038]
gi|260668361|gb|EEX55301.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|260672301|gb|EEX59122.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674934|gb|EEX61755.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|297175569|gb|EFH34916.1| BRO family protein [Brucella abortus bv. 5 str. B3196]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 130
>gi|163843350|ref|YP_001627754.1| BRO domain-containing protein [Brucella suis ATCC 23445]
gi|261755049|ref|ZP_05998758.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|163674073|gb|ABY38184.1| BRO family, N-terminal domain protein [Brucella suis ATCC 23445]
gi|261744802|gb|EEY32728.1| BRO family protein [Brucella suis bv. 3 str. 686]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLY 130
>gi|309805014|ref|ZP_07699071.1| phage antirepressor protein [Lactobacillus iners LactinV 09V1-c]
gi|308165673|gb|EFO67899.1| phage antirepressor protein [Lactobacillus iners LactinV 09V1-c]
Length = 265
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 4 ITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENS-NEAINAHCKGVAKRYPLKTEG 61
I F FE+N+IRT I+D + +F D L +N+ N + GV + G
Sbjct: 7 IQIFNFENNEIRTKIIDNEP--YFNLTDACKILEIQNTRNAKARLNEDGVRTMDTIDRLG 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
Q+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y + T T
Sbjct: 65 RTQQANFISEPNLYKLIFQSRKPEAEKFADWVTSEVLPAIVHKGVYMTDKKAYDITHDRT 124
Query: 122 VLRVHKHLEELAKQAGLKDNQL 143
+ L++ A Q KD Q+
Sbjct: 125 GATLADLLQQAADQLKQKDIQI 146
>gi|225627558|ref|ZP_03785595.1| BRO family protein [Brucella ceti str. Cudo]
gi|225852586|ref|YP_002732819.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|260168791|ref|ZP_05755602.1| BRO family protein [Brucella sp. F5/99]
gi|261219430|ref|ZP_05933711.1| BRO family protein [Brucella ceti M13/05/1]
gi|261222250|ref|ZP_05936531.1| BRO family protein [Brucella ceti B1/94]
gi|261314193|ref|ZP_05953390.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317718|ref|ZP_05956915.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321926|ref|ZP_05961123.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|261325173|ref|ZP_05964370.1| BRO family protein [Brucella neotomae 5K33]
gi|261758273|ref|ZP_06001982.1| BRO family protein [Brucella sp. F5/99]
gi|265988749|ref|ZP_06101306.1| BRO [Brucella pinnipedialis M292/94/1]
gi|265994999|ref|ZP_06107556.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|265998214|ref|ZP_06110771.1| BRO family protein [Brucella ceti M490/95/1]
gi|265999453|ref|ZP_05466455.2| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|225617563|gb|EEH14608.1| BRO family protein [Brucella ceti str. Cudo]
gi|225640951|gb|ACO00865.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|260920834|gb|EEX87487.1| BRO family protein [Brucella ceti B1/94]
gi|260924519|gb|EEX91087.1| BRO family protein [Brucella ceti M13/05/1]
gi|261294616|gb|EEX98112.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|261296941|gb|EEY00438.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301153|gb|EEY04650.1| BRO family protein [Brucella neotomae 5K33]
gi|261303219|gb|EEY06716.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738257|gb|EEY26253.1| BRO family protein [Brucella sp. F5/99]
gi|262552682|gb|EEZ08672.1| BRO family protein [Brucella ceti M490/95/1]
gi|262766112|gb|EEZ11901.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|263094067|gb|EEZ17989.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660946|gb|EEZ31207.1| BRO [Brucella pinnipedialis M292/94/1]
gi|326538811|gb|ADZ87026.1| BRO family protein [Brucella melitensis M5-90]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 130
>gi|226363417|ref|YP_002781199.1| hypothetical protein ROP_40070 [Rhodococcus opacus B4]
gi|226241906|dbj|BAH52254.1| hypothetical protein [Rhodococcus opacus B4]
Length = 266
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPS 85
F DV T L NS +A+ + T GG Q++ +++E +Y L+ +S P
Sbjct: 32 FALADVCTILEIRNSRDAVGRLDRKDVGSTDTLTAGGRQQITVVNESGLYELIFQSRKPE 91
Query: 86 AQKFERWVFEEVLPTLRKTGSYSV 109
A++F RW+ EVLP++R+TGSY V
Sbjct: 92 AKRFRRWITTEVLPSIRRTGSYGV 115
>gi|229148259|ref|ZP_04276562.1| Antirepressor, phage associated [Bacillus cereus BDRD-ST24]
gi|228635271|gb|EEK91798.1| Antirepressor, phage associated [Bacillus cereus BDRD-ST24]
Length = 256
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN------AHCKGVAKRYPLKTEGGI 63
E ++RT+V K +++WFVAKDV L N+ +++ H VA G
Sbjct: 11 EFGQVRTVV-KGEDVWFVAKDVCDVLEIVNATRSLSRLDEDELHSMKVADSL-----GRP 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q II+E +Y L++ S P A+ F++WV EVLP++RK G+Y
Sbjct: 65 QDTNIINESGLYSLIMTSRKPQAKAFKKWVTSEVLPSIRKHGAY 108
>gi|254704376|ref|ZP_05166204.1| BRO domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 184
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLY 123
>gi|317164559|gb|ADV08100.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|254706730|ref|ZP_05168558.1| BRO family protein [Brucella pinnipedialis M163/99/10]
gi|254710163|ref|ZP_05171974.1| BRO family protein [Brucella pinnipedialis B2/94]
gi|254714162|ref|ZP_05175973.1| BRO family protein [Brucella ceti M644/93/1]
gi|254717597|ref|ZP_05179408.1| BRO family protein [Brucella ceti M13/05/1]
gi|256031658|ref|ZP_05445272.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|256061169|ref|ZP_05451322.1| BRO family protein [Brucella neotomae 5K33]
gi|256113637|ref|ZP_05454452.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|256159805|ref|ZP_05457545.1| BRO family protein [Brucella ceti M490/95/1]
gi|256255060|ref|ZP_05460596.1| BRO family protein [Brucella ceti B1/94]
gi|326409105|gb|ADZ66170.1| BRO family protein [Brucella melitensis M28]
Length = 184
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 123
>gi|71906436|ref|YP_284023.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71846057|gb|AAZ45553.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 111
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
Query: 17 IVDKDQNIWFVAKDVATAL--GYENSNEAINAHCKGVAKRYP-------LKTEGGIQKVR 67
+V D WFVA+D+ AL G++ SN + A + V + + T G QKV
Sbjct: 1 MVTIDDQPWFVARDICEALELGWDKSNN-VYAPSRLVKPLHDDEKASKQIATSG--QKVI 57
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++SE +Y+L+++S P A+ F+ WV +EVLP++RKTGS+ P L
Sbjct: 58 LVSESGLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSFVTGHPSL 104
>gi|254689311|ref|ZP_05152565.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|254697445|ref|ZP_05159273.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254730342|ref|ZP_05188920.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|256257558|ref|ZP_05463094.1| BRO family protein [Brucella abortus bv. 9 str. C68]
gi|260883838|ref|ZP_05895452.1| BRO domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260873366|gb|EEX80435.1| BRO domain-containing protein [Brucella abortus bv. 9 str. C68]
Length = 184
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 123
>gi|240116004|ref|ZP_04730066.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|268601671|ref|ZP_06135838.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585802|gb|EEZ50478.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|37526842|ref|NP_930186.1| hypothetical protein plu2952 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786274|emb|CAE15326.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 271
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S T F+F S++IR +++KD WFVA DV +AL +N +AI + + G
Sbjct: 11 SNFTIFKFGSHEIR-VINKDGEPWFVAHDVCSALEIQNITQAIERLDDDERSMFNI---G 66
Query: 62 GIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ ++SE +Y L+++ ++P +F +WV EVLP++RK G+Y +PK+
Sbjct: 67 HQDDINVVSESGMYTLVLRCRDAIKQGSIP--HRFRKWVTNEVLPSIRKVGNY--HSPKI 122
Query: 115 RATSASTVLR 124
T T+LR
Sbjct: 123 -ITDEHTLLR 131
>gi|240016262|ref|ZP_04722802.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|194099000|ref|YP_002002067.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|240123852|ref|ZP_04736808.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|268682476|ref|ZP_06149338.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|193934290|gb|ACF30114.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|268622760|gb|EEZ55160.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|62289999|ref|YP_221792.1| hypothetical BRO family protein [Brucella abortus bv. 1 str. 9-941]
gi|62196131|gb|AAX74431.1| hypothetical BRO family protein [Brucella abortus bv. 1 str. 9-941]
Length = 177
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 11 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 65
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 66 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 116
>gi|161619034|ref|YP_001592921.1| BRO domain-containing protein [Brucella canis ATCC 23365]
gi|260566379|ref|ZP_05836849.1| BRO family protein [Brucella suis bv. 4 str. 40]
gi|161335845|gb|ABX62150.1| BRO family, N-terminal domain protein [Brucella canis ATCC 23365]
gi|260155897|gb|EEW90977.1| BRO family protein [Brucella suis bv. 4 str. 40]
Length = 191
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLY 130
>gi|71900920|ref|ZP_00683035.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729332|gb|EAO31448.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 202
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 19/165 (11%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKT 59
++ PF FE++ +R ++ + WFVAKD+ L NS A+ A KGV T
Sbjct: 5 SVIPFSFENHPVRVLIINGEP-WFVAKDLCAVLHIVNSRSALIALDETEKGVGST---DT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG Q++ I++E ++ L+++ T+P + +W+ EVLP++RKTGSY+
Sbjct: 61 LGGQQELAIVNESGMWTLVLRCRDAVKPGTVP--YRVRKWITGEVLPSIRKTGSYTATGT 118
Query: 113 KLRATSASTVLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + + + H ++L + + + K Q L + G T+I+G
Sbjct: 119 MVNDDALCAIWFLCDHFKKLHEMSRVNKVPQALYWL--GATEISG 161
>gi|240013813|ref|ZP_04720726.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
gi|240121386|ref|ZP_04734348.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|240113249|ref|ZP_04727739.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|268599329|ref|ZP_06133496.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583460|gb|EEZ48136.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 289
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSV 109
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQV 117
>gi|188589251|ref|YP_001921887.1| antirepressor, phage associated [Clostridium botulinum E3 str.
Alaska E43]
gi|188499532|gb|ACD52668.1| antirepressor, phage associated [Clostridium botulinum E3 str.
Alaska E43]
Length = 270
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI-------ISEPDVYRLL 78
F+ KDVA ALGY + A++ H +R K G I + I I+E +Y L+
Sbjct: 27 FIGKDVAAALGYCDPKSAVSNHVDKEDRRIIQK--GQITTLEIPNRGLTVINESGLYSLI 84
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ S L A+KF+RWV EVLP++RK+G Y
Sbjct: 85 LSSKLQCAKKFKRWVTSEVLPSIRKSGEY 113
>gi|145596524|ref|YP_001160821.1| BRO domain-containing protein [Salinispora tropica CNB-440]
gi|145305861|gb|ABP56443.1| BRO domain protein domain protein [Salinispora tropica CNB-440]
Length = 284
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPLKTEGG 62
IT FEF +RT+ + WFV D L N S A H ++ + G
Sbjct: 25 ITTFEFGDLPLRTVTVGGEP-WFVVADACQGLDLTNPSMAASRLHADDLSTAEVIDGMGR 83
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q VRI +E +Y L+ +S P A+ F RWV EVLP +R TG Y
Sbjct: 84 RQHVRITNESGLYDLIFQSRKPEARAFRRWVTHEVLPAIRATGRY 128
>gi|228961476|ref|ZP_04123087.1| Phage antirepressor protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228798190|gb|EEM45192.1| Phage antirepressor protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 256
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ-KVRI 68
E ++RT+V + ++ WFVAKDV L +N+ +A+ + + + GG+ I
Sbjct: 13 ELGQVRTVV-QGEDAWFVAKDVCEVLDIKNTTQAVQKLDEDEVTMFNI---GGLSGNTNI 68
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+E +Y L++ S P A+ F++WV EV+P++RK G+Y
Sbjct: 69 INESGLYSLIMTSRKPQAKAFKKWVTSEVIPSIRKYGAY 107
>gi|167034396|ref|YP_001669627.1| prophage antirepressor [Pseudomonas putida GB-1]
gi|166860884|gb|ABY99291.1| prophage antirepressor [Pseudomonas putida GB-1]
Length = 284
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 13/113 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S++TPF+F +R + D WFVA DV LG N+ +A+ A + + + +G
Sbjct: 9 SSVTPFDFRGYSVRAVT-IDGEPWFVAADVCRVLGVTNTTQAMQALDEDERSMFNIGRQG 67
Query: 62 GIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
+++E +Y L+++S + P A F +WV EVLP++RKTG+Y
Sbjct: 68 ---SANLVNESGLYTLILRSRDAVKKGSKPHA--FRKWVTAEVLPSIRKTGAY 115
>gi|82699927|ref|YP_414501.1| hypothetical protein BAB1_1106 [Brucella melitensis biovar Abortus
2308]
gi|82616028|emb|CAJ11062.1| BRO family, N-terminal [Brucella melitensis biovar Abortus 2308]
Length = 171
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 5 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 59
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 60 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 110
>gi|270659695|ref|ZP_06222358.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270316963|gb|EFA28644.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 77
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQ 64
F F+S+++R I D +Q WF DV LGY+N+ +A+ HCK G+AKRY T+ G Q
Sbjct: 10 FNFKSSQVRVITDPNQEFWFCGSDVCYILGYKNAPDALAKHCKQGGIAKRYT-PTQSGEQ 68
Query: 65 KVRIISEPD 73
++ I+EP+
Sbjct: 69 EMIFINEPN 77
>gi|331648162|ref|ZP_08349252.1| putative BRO family, N- domain protein [Escherichia coli M605]
gi|331043022|gb|EGI15162.1| putative BRO family, N- domain protein [Escherichia coli M605]
Length = 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 7 FEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGG 62
F FES IR IV + WF+A DV A+G N +A+ + KGVA T GG
Sbjct: 10 FSFESQADIRVIVINGEP-WFIASDVCRAIGIANHRDAVRKLDDDEKGVAS---TDTPGG 65
Query: 63 IQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
Q+ IISE +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 66 EQESIIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 115
>gi|237727004|ref|ZP_04557485.1| LOW QUALITY PROTEIN: antirepressor [Bacteroides sp. D4]
gi|229433860|gb|EEO43937.1| LOW QUALITY PROTEIN: antirepressor [Bacteroides dorei 5_1_36/D4]
Length = 201
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T GIQK++ I+E +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y +
Sbjct: 5 TTSGIQKMKYINEGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI 55
>gi|117624697|ref|YP_853610.1| putative anti-repressor protein [Escherichia coli APEC O1]
gi|115513821|gb|ABJ01896.1| putative anti-repressor protein [Escherichia coli APEC O1]
Length = 231
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 7 FEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGG 62
F FES IR IV + WF+A DV A+G N +A+ + KGVA T GG
Sbjct: 10 FSFESQADIRVIVINGEP-WFIASDVCRAIGIANHRDAVRKLDDDEKGVAS---TDTPGG 65
Query: 63 IQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
Q+ IISE +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 66 EQESIIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 115
>gi|317485526|ref|ZP_07944403.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923206|gb|EFV44415.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 263
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN-EAINAHCKG---VAKRYP 56
MS + F+ +++ WFVA+DV LG E + I H + V +
Sbjct: 1 MSGLRIFQNREFGAVRVIEYGGEPWFVARDVCAVLGTETRDLPDILEHDEQRPIVDIIHT 60
Query: 57 LKTEGGIQK-VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA-PKL 114
L G+++ RIISEP +Y L+++S P A+ F+RW+ EV+P++R+TG Y A P
Sbjct: 61 LNDSTGLRRDSRIISEPGLYSLVLRSRKPEAKAFKRWIVHEVIPSIRRTGGYGALALPNF 120
Query: 115 R 115
R
Sbjct: 121 R 121
>gi|114679905|ref|YP_758355.1| bro-e [Leucania separata nuclear polyhedrosis virus]
gi|39598636|gb|AAR28822.1| bro-e [Leucania separata nuclear polyhedrosis virus]
Length = 354
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 51/268 (19%)
Query: 1 MSTITPFEFE----SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVA 52
M T+ +F+ + ++R +D+D +WFV +D+A L Y+ + +AI H K +
Sbjct: 28 MCTVVVRDFKFGDITMRLRYTIDQDNCVWFVGRDIAKLLKYQRTQDAIKKHVNVKYKALI 87
Query: 53 KRYP-------LKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
K P +E + + +I++ V +L++ S LP A + + W+ EEV+P + T
Sbjct: 88 KHSPDYDAESSSDSETNLHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEEVIPQVLST 147
Query: 105 GSYSVEAPKLRAT----SASTVLRVHKHLEELAKQAGL--KDNQLLLKVNRGVTKITGVD 158
G Y E ++ S + VL L+E+++ G +DN+ L K
Sbjct: 148 GRYVCETAPSKSVNDCQSQTVVL-----LQEISQTMGQLKRDNEDLKK------------ 190
Query: 159 QLEAMD--IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
L A D +K L ++ + QI L R R KLL + QVS++
Sbjct: 191 SLVAKDETLKRLATNKD------KQIDRLLGDLTRYR---KLLYYKEEQVSELREKTVEY 241
Query: 217 PKGEERGGKMCDVPMQHV-EGSTQQLKW 243
P+ E + +C Q V T Q KW
Sbjct: 242 PRCEYKQPYLCISKRQTVFTAITGQRKW 269
>gi|158425230|ref|YP_001526522.1| putative prophage antirepressor [Azorhizobium caulinodans ORS 571]
gi|158332119|dbj|BAF89604.1| putative prophage antirepressor [Azorhizobium caulinodans ORS 571]
Length = 246
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 34/130 (26%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ +TPF + + IR ++ D WFVA DV AL E KG KRY
Sbjct: 1 MNALTPFNYRDHTIRVVI-LDGEPWFVAADVCRAL------EMPFGEGKGTVKRY----L 49
Query: 61 GGI-----------------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
GG+ + ISE +YRL ++S P A F+ WV +EV
Sbjct: 50 GGLLEGETRFVPKSSVHSDAPTSFPNRGTTCISESGLYRLTMRSNKPGALPFQNWVVQEV 109
Query: 98 LPTLRKTGSY 107
LP +RK G Y
Sbjct: 110 LPAIRKDGGY 119
>gi|306827221|ref|ZP_07460509.1| prophage pi1 protein 08 [Streptococcus pyogenes ATCC 10782]
gi|304430578|gb|EFM33599.1| prophage pi1 protein 08 [Streptococcus pyogenes ATCC 10782]
Length = 247
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 25 WFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
+F KD L +NS + + + KGV L T GG Q+ I+E + Y+L+ +S
Sbjct: 24 FFNLKDCCKILEIKNSKDVVKRLNPKGVVTT-DLLTNGGTQQANFINESNFYKLVFQSRK 82
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHKHLEE 131
P A+KF WV EVLP++RK G+Y E +A TS ++R+ L+E
Sbjct: 83 PEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSPDFLIRLANELKE 131
>gi|327198754|emb|CCA61455.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 403
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRY---------- 55
F F+ N ++ + DQ WF AKDV LGY + +A+ H + V ++Y
Sbjct: 109 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSDEKDAMKKHIQRYVPEKYKRSYEIINGG 167
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
P G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 168 DFGSPHPINGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AMET 224
Query: 112 PKLRATSASTVLR-VHKHLEELAKQAGLKDNQLLLKVNR 149
R ++ + +R + K E L +A + + + +L +NR
Sbjct: 225 ILNRNSNLESNMRLLLKQNESLLVKATVAEERAVLALNR 263
>gi|19746241|ref|NP_607377.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|19748427|gb|AAL97876.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
Length = 247
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 25 WFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
+F KD L +NS + + + KGV L T GG Q+ I+E + Y+L+ +S
Sbjct: 24 FFNLKDCCKILEIKNSKDVVKRLNPKGVVTT-DLLTNGGTQQANFINESNFYKLVFQSRK 82
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHKHLEE 131
P A+KF WV EVLP++RK G+Y E +A TS ++R+ L+E
Sbjct: 83 PEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSPDFLIRLANELKE 131
>gi|269215151|ref|ZP_05987828.2| KilA domain protein [Neisseria lactamica ATCC 23970]
gi|269208170|gb|EEZ74625.1| KilA domain protein [Neisseria lactamica ATCC 23970]
Length = 305
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y + P
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQI-TP 119
Query: 113 KLRA 116
K A
Sbjct: 120 KTTA 123
>gi|125974947|ref|YP_001038857.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125715172|gb|ABN53664.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 248
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQK 65
F ++ ++RT + D W+VAKDV L ++++A+ + P+ G +Q+
Sbjct: 8 FNYKGKQVRTFI-IDGEPWWVAKDVCDILELGDTHKAMERLDEDERNTIPVTDSLGRLQE 66
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+++E +Y L++ S A++F+RW+ EV+P +RKTG Y++E +L A + ++
Sbjct: 67 TYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQIRKTGIYALEPKQLLAVA---IIEA 123
Query: 126 HKHLEE 131
K +EE
Sbjct: 124 QKIIEE 129
>gi|261752388|ref|ZP_05996097.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261742141|gb|EEY30067.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 191
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDYKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 130
>gi|310827574|ref|YP_003959931.1| prophage antirepressor [Eubacterium limosum KIST612]
gi|308739308|gb|ADO36968.1| prophage antirepressor [Eubacterium limosum KIST612]
Length = 280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Query: 9 FES---NKIRTIVDKDQ------NIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYP 56
FES KIRT+V+++ W VA DV ALGY +I + + +KR
Sbjct: 10 FESALFGKIRTLVEREAADGAEAREWLVAADVCAALGYSKDASSIVKRHVNPADTSKRRI 69
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + +++E +Y L+ ST P AQ F+R+V +LP++R+ G+Y + R
Sbjct: 70 CDANGHHQSMLVVNESGLYALIFGSTRPEAQTFKRYVTAVILPSIRRHGAYMEDDVMDRV 129
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL-PSSDNDE 175
+R L ++ + K+ L K VD+LE M IK L P++ E
Sbjct: 130 QDDPGAMR---ELMDMLRAETAKNKALGAK----------VDKLE-MRIKALTPNAVFGE 175
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSK-------VSGGYRPTPKG 219
+T ++ + + KLL + G+ + + GG+ T KG
Sbjct: 176 AITASEGSISMGD------MAKLLRQNGVNIGRNRLFTKLREGGFLSTQKG 220
>gi|268592743|ref|ZP_06126964.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291311519|gb|EFE51972.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 198
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 13/124 (10%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCKGVAKRYPLKT 59
I+ FE ++R IV+ WFVAKDV AL NS A+ A VA Y ++
Sbjct: 31 ISTIRFEDVQVR-IVNIKNEPWFVAKDVCDALEIINSRGALKALDLDEKNTVALNYGIQ- 88
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G +II+E Y+L+ +S A +F WVF EV+P++RKTG+Y V +L
Sbjct: 89 --GNPNRQIIAESGFYKLIARSRKAVTKDTFAYRFSNWVFREVIPSIRKTGAYGVPFAEL 146
Query: 115 RATS 118
A S
Sbjct: 147 NAFS 150
>gi|187735860|ref|YP_001877972.1| prophage antirepressor [Akkermansia muciniphila ATCC BAA-835]
gi|187425912|gb|ACD05191.1| prophage antirepressor [Akkermansia muciniphila ATCC BAA-835]
Length = 264
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 25/119 (21%)
Query: 4 ITPFEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---------NAHCKGVA 52
+ PF+ E+ +R +V KD WFVAKDV AL N ++A+ N +A
Sbjct: 6 VVPFQNETLNCTVRAVV-KDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITNDIA 64
Query: 53 K---RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ R PL II+E +Y L+++S P A+KF++WV EVLP++RK G Y+
Sbjct: 65 QNGGRAPL----------IINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYA 113
>gi|325912758|ref|ZP_08175137.1| phage antirepressor protein [Lactobacillus iners UPII 60-B]
gi|325477889|gb|EGC81022.1| phage antirepressor protein [Lactobacillus iners UPII 60-B]
Length = 265
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 4 ITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENS-NEAINAHCKGVAKRYPLKTEG 61
I F FE+N+IRT I+D + +F D L +N+ N + GV + G
Sbjct: 7 IQIFNFENNEIRTKIIDNEP--YFNLTDACKILEIQNTRNAKARLNEDGVRTMDTIDRLG 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
Q+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y + T +
Sbjct: 65 RTQQANFISEPNLYKLIFQSRKPEAEKFADWVTSEVLPAIVHKGVYMTDKKAYDITHDRS 124
Query: 122 VLRVHKHLEELAKQAGLKDNQL 143
+ L++ A Q KD Q+
Sbjct: 125 GATLADLLQQAADQLKQKDIQI 146
>gi|292397819|ref|YP_003517885.1| BRO-K [Lymantria xylina MNPV]
gi|291065536|gb|ADD73854.1| BRO-K [Lymantria xylina MNPV]
Length = 326
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 25/126 (19%)
Query: 4 ITPFEFESNK--IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++D+ + FVAKDVA +L YEN+ E++ H V +Y E
Sbjct: 7 IGQFKFGEDEFTLRYVLERDRQVKFVAKDVAVSLSYENTTESVRKH---VDAKYKTTYEQ 63
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 64 GEQFTLPASNSVVKRGDPLYLQANTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 123
Query: 102 RKTGSY 107
TG Y
Sbjct: 124 LCTGKY 129
>gi|25027384|ref|NP_737438.1| hypothetical protein CE0828 [Corynebacterium efficiens YS-314]
gi|259506475|ref|ZP_05749377.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23492665|dbj|BAC17638.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165895|gb|EEW50449.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 262
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
IT F +++R + + W VA D+A LG +++ + + + ++T G
Sbjct: 2 ITLLNFHDHQVRVVQVAGEPQW-VAADIAAVLGLGRTHDMVRSLDEDERGAVTIRTPSGE 60
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA--TSAST 121
Q++ +I+E +Y +++S P A++F+RWV EVLP++R+ G Y + PK+ T T
Sbjct: 61 QEMTVITESGLYSCILRSRKPEAKEFKRWVTREVLPSIRRHGGYLTD-PKIEEILTDPDT 119
Query: 122 VLRVHKHLEE 131
++++ L++
Sbjct: 120 IIKLATDLKQ 129
>gi|254701830|ref|ZP_05163658.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 184
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDYKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 123
>gi|163759897|ref|ZP_02166981.1| BRO, N-terminal [Hoeflea phototrophica DFL-43]
gi|162282855|gb|EDQ33142.1| BRO, N-terminal [Hoeflea phototrophica DFL-43]
Length = 154
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 25/119 (21%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE------------NSNEAINAHC 48
M+ P F + ++ T+ D N WFVA DV ALG N NE NA
Sbjct: 10 MALHCPLTFTAIRVVTL---DGNPWFVAADVCRALGLTTYGGATRHMRNLNQNEVGNAQ- 65
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L T+GG +SE +Y+L+++S P A+ F+ WV +VLP +RK G Y
Sbjct: 66 --------LSTKGGKPNA-TVSESGLYKLIMRSDKPEAKAFQDWVTRDVLPAIRKDGGY 115
>gi|134287304|ref|YP_001111000.1| Bro17 [Heliothis virescens ascovirus 3e]
gi|133722212|gb|ABO37334.1| Bro17 [Heliothis virescens ascovirus 3e]
Length = 502
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 35/42 (83%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+EP +Y+L KSTLP A++F+ W++EEVLPT+R+TG Y++
Sbjct: 88 FITEPAIYKLCTKSTLPEAEEFQDWIYEEVLPTIRRTGGYNI 129
>gi|15078913|ref|NP_149664.1| 201R [Invertebrate iridescent virus 6]
gi|82012215|sp|Q91FW9|VF201_IIV6 RecName: Full=Putative Bro-N domain-containing protein 201R
gi|15042283|gb|AAK82063.1|AF303741_201 201R [Invertebrate iridescent virus 6]
Length = 419
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 21/107 (19%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKG---------VAKRYPLKTEG----GIQ------- 64
+F KDV T LGY++ +A+ K K+ P+ T G G Q
Sbjct: 35 YFCGKDVCTILGYKDKEQALRKRVKSKHKKSLSELFEKKLPVVTTGNFFLGTQNELSYHE 94
Query: 65 -KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
K I+EP +Y L++ S P A++F+ V+E++LP++RK GSYS+E
Sbjct: 95 GKSIYINEPGLYNLIMSSEAPFAEQFQDMVYEKILPSIRKYGSYSIE 141
>gi|218290887|ref|ZP_03494951.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
gi|218239154|gb|EED06356.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG- 61
T+ + FE +IR ++ D+ W+VAKDV AL NS +A+ + K +G
Sbjct: 11 TMMEWMFEGQRIRVVMIDDEP-WWVAKDVCEALQIANSRDAV-SRLDEDEKNTVAIIDGN 68
Query: 62 -GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G +I+E +Y+L S + +A++F RW+ EVLP +RKTG Y
Sbjct: 69 RGNPNTTVINEAGLYQLTFTSRVDTAKRFRRWLAHEVLPAIRKTGEY 115
>gi|215401532|ref|YP_002332836.1| BRO-2 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484073|gb|ACI47506.1| BRO-2 [Spodoptera litura nucleopolyhedrovirus II]
Length = 505
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 27/118 (22%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAH---------------------CKGVAKRYP 56
VD DQ + VA LGY+ A+ H CK + P
Sbjct: 43 VDNDQ-FMYKGHAVANILGYKKPRNALAMHVKPNWRKTWEEIHDTAKHRLQCKSALNQGP 101
Query: 57 LKTEGGIQ-----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + ISE VY L+++S LP+A++F++W+FEEVLP LRKTG+YSV
Sbjct: 102 HLAQAQLPVNWHPHTVFISEAGVYALIMRSKLPAAEEFQQWLFEEVLPELRKTGTYSV 159
>gi|169634092|ref|YP_001707828.1| hypothetical protein ABSDF2615 [Acinetobacter baumannii SDF]
gi|169152884|emb|CAP01922.1| conserved hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--K 58
MS ++ F F N+IRTIV D IWFVA DVAT LGY N+ + + A + L +
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFVAADVATVLGYRNAPDMVRNLDVEEADTHNLRIR 60
Query: 59 TEGGI---QKVRIISEPDVYRLLVKSTLPSAQKF 89
++ G+ ++V II+E +Y ++S P A++F
Sbjct: 61 SDNGVLQDRQVTIINESGLYSATLRSRKPEAKQF 94
>gi|262043547|ref|ZP_06016660.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039081|gb|EEW40239.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 271
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F FES+ + D N WF A DV A+G N +A+ + KGV T GG
Sbjct: 50 FNFESDSAIRAIMIDGNPWFFASDVCRAIGIANHRDAVRKLDDDEKGVGS---TDTLGGE 106
Query: 64 QKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Q+ IISE +Y L+++ T+P +F +WV EVLP +R TG Y E
Sbjct: 107 QESVIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTSEVLPQIRNTGRYVRE 158
>gi|282909325|ref|ZP_06317141.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958768|ref|ZP_06376214.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|282326893|gb|EFB57190.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283789808|gb|EFC28630.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus A017934/97]
Length = 262
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ ++
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDS 119
>gi|215401346|ref|YP_002332650.1| BRO-E [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448846|gb|ACH88636.1| BRO-E [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 352
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 13/110 (11%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGY---ENSNEAIN-AHCKGVAK-RYPLK-----TEGGI 63
I TI D WF AK+ A +GY + + E +N + K + R+P++ + G+
Sbjct: 21 IETIDDDKVQFWFAAKEFAIEMGYGKPQAAFEKVNLKYRKKYGQFRWPVEAATHDSSFGM 80
Query: 64 QKVRI-ISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVE 110
Q + ++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 81 QPSTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKID 130
>gi|32035075|ref|ZP_00135134.1| COG3617: Prophage antirepressor [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 215
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T+GG Q+V I+EP++YR++ +S A F+ WVFEEVLP +RKTG YS
Sbjct: 5 TKGGKQEVTFINEPNLYRIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQYS 54
>gi|29566461|ref|NP_818027.1| gp54 [Mycobacterium phage Che9d]
gi|29425186|gb|AAN07972.1| gp54 [Mycobacterium phage Che9d]
Length = 333
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
FE + +R + DQ W VAKDV A+G + +AI + T GG Q +
Sbjct: 85 FEGHNVRHVF-TDQPYW-VAKDVCEAVGIKAYRDAIAQLDSDERVSVAVDTLGGAQNMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
++E V+ L++ S P + F+RW+ EVLP++RKTG Y+ +
Sbjct: 143 VTEAGVWSLMLISRSPRVKPFKRWMTHEVLPSIRKTGGYAAD 184
>gi|57651252|ref|YP_185217.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus COL]
gi|57285438|gb|AAW37532.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus COL]
gi|315193395|gb|EFU23792.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus CGS00]
Length = 263
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|66395521|ref|YP_239897.1| ORF013 [Staphylococcus phage 42E]
gi|88195764|ref|YP_500573.1| bacteriophage L54a, antirepressor [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|62636014|gb|AAX91125.1| ORF013 [Staphylococcus phage 42E]
gi|87203322|gb|ABD31132.1| bacteriophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|329725140|gb|EGG61630.1| BRO family, N-terminal domain protein [Staphylococcus aureus subsp.
aureus 21189]
Length = 263
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|221195256|ref|ZP_03568312.1| prophage antirepressor [Atopobium rimae ATCC 49626]
gi|221185159|gb|EEE17550.1| prophage antirepressor [Atopobium rimae ATCC 49626]
Length = 248
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE-NSNEAINAHCKGVAKRYPLKT 59
++ T EF + TI + WFVAKDV +LG + + ++ K V + T
Sbjct: 3 LTVFTSDEFGQLRTTTI---NGEPWFVAKDVTDSLGLDRTATRRLDDDEKAVRSTH---T 56
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLR 115
GG Q + I+S P + L++ S P A+ ++RWV EVLP + + G Y E P++
Sbjct: 57 VGGAQDMTIVSLPGLLSLVLSSRKPGAKAYKRWVTHEVLPAIHRDGGYIAAEVNEPPEVI 116
Query: 116 ATSA-----STVLRVHKHLEELAKQAGLKD 140
A T+ R + +EELA +A D
Sbjct: 117 LARALKIADETMRRQKQQIEELAPRARFAD 146
>gi|86355576|ref|YP_473244.1| BRO-b [Hyphantria cunea nucleopolyhedrovirus]
gi|86198181|dbj|BAE72345.1| BRO-b [Hyphantria cunea nucleopolyhedrovirus]
Length = 323
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------ 55
I F+F ++ +R ++ +Q + FVAKD+A++L Y N +A++ H V K+Y
Sbjct: 6 IGQFKFGQDAFTLRYVLGGEQPVKFVAKDIASSLKYGNCKDAVSKH---VDKKYKYTYSE 62
Query: 56 ------PLKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
PL ++ ++ ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 PGARIAPLASDSVARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 122
Query: 101 LRKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ +TG Y AP ++ T+ + ++K L ++ + +++ N VT TG+ Q
Sbjct: 123 VLRTGKY---APAVKMDTNYGVIEELNKKLTFASESLAEANEKIIHFANALVTANTGLVQ 179
Query: 160 LEAM 163
AM
Sbjct: 180 ANAM 183
>gi|29028570|ref|NP_803260.1| anti-repressor [Staphylococcus phage 11]
gi|18920494|gb|AAL82235.1| anti-repressor [Staphylococcus phage 11]
Length = 274
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY S+ AI H K +
Sbjct: 12 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 70
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 71 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 129
>gi|206599580|ref|YP_002242019.1| gp36 [Mycobacterium phage Brujita]
gi|206282729|gb|ACI06250.1| gp36 [Mycobacterium phage Brujita]
gi|302858471|gb|ADL71218.1| gp36 [Mycobacterium phage island3]
Length = 289
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQK 65
F + + +R ++ D WFV D+ L N + + GV + YP+ G Q+
Sbjct: 30 FTYGNAAVRVVL-IDGEPWFVLADLCKVLDIRNVKDVRDRLADGVDQTYPIADSLGRTQQ 88
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+SE +Y ++++S P A F RW+ VLP +R+TG+Y
Sbjct: 89 ATIVSESGMYEVVIRSDKPEAVAFRRWITGTVLPEIRRTGAYGA 132
>gi|46205473|ref|ZP_00048502.2| COG3617: Prophage antirepressor [Magnetospirillum magnetotacticum
MS-1]
Length = 163
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
++ITPF+FE +R +V D FVA D+A +LGY ++ + + + +
Sbjct: 19 ASITPFDFEGTPVR-VVSVDGEPCFVAADLARSLGYRDAVNLVRILDEDEVTTHIVSG-- 75
Query: 62 GIQKVRIISEPDVYRLL-----VKS----TLPSAQKFERWVFEEVLPTLRKTGSYSV-EA 111
+++ +++EP +Y + VKS + +F+RWV +V+P++RKTG+YSV +A
Sbjct: 76 --REIMLVTEPGLYHAITARRQVKSLGAQVMERIARFKRWVHHDVIPSIRKTGAYSVRQA 133
Query: 112 PKL 114
P
Sbjct: 134 PAF 136
>gi|109522126|ref|YP_655803.1| gp42 [Mycobacterium phage PMC]
gi|157311236|ref|YP_001469280.1| gp47 [Mycobacterium phage Tweety]
gi|194302997|ref|YP_002014266.1| gp50 [Mycobacterium phage Boomer]
gi|318065840|ref|YP_004123872.1| gp50 [Mycobacterium phage Wee]
gi|91980826|gb|ABE67543.1| gp42 [Mycobacterium phage PMC]
gi|148540865|gb|ABQ86116.1| gp47 [Mycobacterium phage Tweety]
gi|194153045|gb|ACF34112.1| gp50 [Mycobacterium phage Boomer]
gi|315420923|gb|ADU15924.1| gp50 [Mycobacterium phage Wee]
Length = 334
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
FE + +R + DQ W VAKDV A G +AI + T GG Q++
Sbjct: 85 FEGHNVRHVF-TDQPYW-VAKDVCEAAGISKYRDAIVQLDDDERVYLFVDTPGGPQRMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++E V+ LL+ S P + F+RW+ EVLP++RKTG YS
Sbjct: 143 VTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYSA 183
>gi|9635686|ref|NP_061599.1| antirepressor [Staphylococcus prophage phiPV83]
gi|8918756|dbj|BAA97816.1| antirepressor [Staphylococcus prophage phiPV83]
Length = 265
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 41/257 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYS--- 108
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 109 -VEAPKLRATSASTVLRVHKHLEE-----------------LAKQAGLKDNQLLLKVNRG 150
+E TVL +K +E A DN +L+
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQNLVLQQQVEVNKPKVLFADSVAGSDNSILVGELAK 179
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGL----- 204
+ K GVD + K L N+ YL I + GE N P Q++ L L +K+ +
Sbjct: 180 ILKQNGVDIGQNRLFKWLR---NNGYL-IKKSGESYNLPTQKSMDLKILDIKKRIINNPD 235
Query: 205 QVSKVSGGYRPTPKGEE 221
SKVS + T KG++
Sbjct: 236 GSSKVSRTPKVTGKGQQ 252
>gi|292397703|ref|YP_003517769.1| BRO-B [Lymantria xylina MNPV]
gi|291065420|gb|ADD73738.1| BRO-B [Lymantria xylina MNPV]
Length = 299
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 28/144 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++DQ++ FVAKDVAT L Y N AI H V +Y K E
Sbjct: 6 IGQFKFGEDAFTLRYVLERDQSVKFVAKDVATNLKYGNPANAIAKH---VDDKYKSKLEQ 62
Query: 62 GIQK--------------------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
Q ++++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 DTQNGDLASNALARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 122
Query: 102 RKTGSYSVEAPKLRATSASTVLRV 125
TG Y AP ++ ++ ++++
Sbjct: 123 LCTGKY---APAVKMDTSGALVKI 143
>gi|188581117|ref|YP_001924562.1| prophage antirepressor [Methylobacterium populi BJ001]
gi|179344615|gb|ACB80027.1| prophage antirepressor [Methylobacterium populi BJ001]
Length = 293
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 19/136 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE- 60
++ITPF+FE +R +V D FVA D+A +LGY ++ + V + T+
Sbjct: 19 ASITPFDFEGTPVR-VVSVDGEPCFVASDLARSLGYRDAVNLVR-----VLDEDEVTTQI 72
Query: 61 -GGIQKVRIISEPDVY-----RLLVKS----TLPSAQKFERWVFEEVLPTLRKTGSYSV- 109
G +++ +++EP +Y R VKS L +F+RWV +V+P++RKTG+YSV
Sbjct: 73 VSG-REIMLVTEPGLYHAITARRQVKSLGAQVLERIARFKRWVHHDVIPSIRKTGAYSVR 131
Query: 110 EAPKLRATSASTVLRV 125
+ P AS + V
Sbjct: 132 QTPAFDPEDASALRHV 147
>gi|118197570|ref|YP_874282.1| Bro-b [Ecotropis obliqua NPV]
gi|113472565|gb|ABI35772.1| Bro-b [Ecotropis obliqua NPV]
Length = 337
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRI-- 68
I+ ++ + WF AK+ AT +GY + + E IN + + + E I I
Sbjct: 20 IKETINNNVQFWFAAKEFATEMGYGKPQAAFEKINLKYRKKYEDFKHPREMAIDDSSILI 79
Query: 69 ------ISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVE 110
++EP +Y++++ S L + + F+ WVFEEVLPT+RKTG Y ++
Sbjct: 80 HPHTVFVNEPGLYQMILSSKLKNNRVEPFKEWVFEEVLPTIRKTGQYKMD 129
>gi|294675000|ref|YP_003575616.1| BRO domain-containing protein [Prevotella ruminicola 23]
gi|294473360|gb|ADE82749.1| BRO domain protein [Prevotella ruminicola 23]
Length = 126
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI---QKVRIISEPDVYRLLVKS 81
+FV KDVA ALG AI+ H K L G KV II+E +Y L++ S
Sbjct: 42 FFVGKDVALALGDSKPENAISTHVDIEDKTTTLIQGTGSNYKSKVVIINESGLYSLILSS 101
Query: 82 TLPSAQKFERWVFEEVLPTLRKTG 105
LP A+ F+RWV EVLP +R+TG
Sbjct: 102 KLPQAKAFKRWVTSEVLPQIRQTG 125
>gi|258436119|ref|ZP_05689102.1| phage anti-repressor protein [Staphylococcus aureus A9299]
gi|258447678|ref|ZP_05695820.1| phage anti-repressor protein [Staphylococcus aureus A6300]
gi|257848808|gb|EEV72793.1| phage anti-repressor protein [Staphylococcus aureus A9299]
gi|257853525|gb|EEV76486.1| phage anti-repressor protein [Staphylococcus aureus A6300]
Length = 262
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE + T+ +++ + V +VA LGY N AIN H + K R ++
Sbjct: 1 MQALQTFNFEELPVNTLTIENEP-YVVGNEVAKILGYSNYRNAINNHVEDEDKLRTQIRY 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G ++ V +I+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 AGQLRTVTLINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|17987182|ref|NP_539816.1| Phage-related DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260565655|ref|ZP_05836139.1| BRO family protein [Brucella melitensis bv. 1 str. 16M]
gi|265991164|ref|ZP_06103721.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|17982850|gb|AAL52080.1| phage-related DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260151723|gb|EEW86817.1| BRO family protein [Brucella melitensis bv. 1 str. 16M]
gi|263001948|gb|EEZ14523.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
Length = 191
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 25 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 79
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP + K G Y
Sbjct: 80 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLY 130
>gi|309702795|emb|CBJ02126.1| putative phage anti repressor protein [Escherichia coli ETEC
H10407]
Length = 230
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 7 FEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLKTEGGI 63
F FES+ +IR + D WFV KDV AL + + +A KG K+ Y ++T GGI
Sbjct: 8 FSFESSCQIRMFM-IDGEPWFVTKDVCNALNIDVT-QARKLDKKGWNKKGLYSIQTPGGI 65
Query: 64 QKVRIISEPDVYRLLVK-----STLPSAQKFERWVFEEVLPTLRKTGSY 107
Q++ I+SE +Y L+++ + A +F WV EVLP +R+TGSY
Sbjct: 66 QELSIVSESGLYILILRCKEAMTEGTRAFRFLEWVTGEVLPQIRRTGSY 114
>gi|7672865|gb|AAF66674.1|AF143953_2 bro-a [Spodoptera litura NPV]
Length = 322
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++DQ + FVAKDVA +L Y+++ AI H V +Y E
Sbjct: 6 IGEFKFGEDTFSLRYVLERDQPLKFVAKDVAASLKYQDAKRAIKIH---VDDKYRSTFEH 62
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 GGQIAPLVSNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 122
Query: 102 RKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
TG Y AP + + + ++K L ++ + +++ N VT TG+ Q
Sbjct: 123 LCTGKY---APAVEMDANYGAIEELNKKLTFASESLAKANEKIIHFANALVTANTGLVQA 179
Query: 161 EAM 163
AM
Sbjct: 180 NAM 182
>gi|114680084|ref|YP_758497.1| baculovirus repeated ORF-a [Plutella xylostella multiple
nucleopolyhedrovirus]
gi|91982148|gb|ABE68416.1| baculovirus repeated ORF-a [Plutella xylostella multiple
nucleopolyhedrovirus]
Length = 322
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 29/183 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++DQ + FVAKDVA +L Y+++ AI H V +Y E
Sbjct: 6 IGEFKFGEDTFSLRYVLERDQPLKFVAKDVAASLKYQDAKRAIKIH---VDDKYRSTFEH 62
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 GGQIAPLVSNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 122
Query: 102 RKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
TG Y AP + + + ++K L ++ + +++ N VT TG+ Q
Sbjct: 123 LCTGKY---APAVEMDANYGAIEELNKKLTFASESLAKANEKIIHFANALVTANTGLVQA 179
Query: 161 EAM 163
AM
Sbjct: 180 NAM 182
>gi|256044742|ref|ZP_05447646.1| Phage-related DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 184
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
V I+SE +Y+L+++ST P A+KF+ WV VLP + K G Y
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLY 123
>gi|304443272|ref|YP_003857102.1| phage anti-repressor [Staphylococcus phage SAP-26]
gi|302749880|gb|ADL66965.1| phage anti-repressor [Staphylococcus phage SAP-26]
Length = 263
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|134287305|ref|YP_001111001.1| Bro18 [Heliothis virescens ascovirus 3e]
gi|133722213|gb|ABO37335.1| Bro18 [Heliothis virescens ascovirus 3e]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINAHC-----------KGVAKRYPLKTEGGIQ-KVR 67
KD A +A LGY+ A+ H KG PL Q
Sbjct: 28 KDPLFMVSAHGIAELLGYKQPAHAVKKHVRPKHRKTWEEIKGCMIHTPLDVPPNWQPNTV 87
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+EP +Y L +S LP A++F+ W++E+VLP++R+TGSY++
Sbjct: 88 FITEPGIYALCDRSRLPEAEEFQDWIYEDVLPSIRRTGSYNI 129
>gi|297583087|ref|YP_003698867.1| prophage antirepressor [Bacillus selenitireducens MLS10]
gi|297141544|gb|ADH98301.1| prophage antirepressor [Bacillus selenitireducens MLS10]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 22/128 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPL 57
M+ + F FE + +RT+ K W+VAKDV G N N A ++A KG + +
Sbjct: 1 MNELKLFHFEGHAVRTL-QKAGETWWVAKDVCEVFGETNRNRAMRNLDADEKGYTQ---M 56
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSA---------------QKFERWVFEEVLPTLR 102
T G Q+V I++EP +Y LL A + F+RWV +VLP +R
Sbjct: 57 TTPRGPQEVAIVNEPGLYSLLFTMRPKKARGLTAEEVTDRENRLKAFKRWVTHDVLPMIR 116
Query: 103 KTGSYSVE 110
+ G Y+ E
Sbjct: 117 QHGLYATE 124
>gi|324008543|gb|EGB77762.1| BRO family protein [Escherichia coli MS 57-2]
Length = 228
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 2 STITP--FEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
+ +TP F FES IR IV D N WFVAKDV AL N +I + ++ L
Sbjct: 3 ANVTPSVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLG 61
Query: 59 TEGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
+G + IISE +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 62 RQG---ETNIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 112
>gi|209170903|ref|YP_002268049.1| BRO-A [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436494|gb|ACI28721.1| BRO-A [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 493
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I+E VY L+++S LP+A++F+RW+FEEVLP LR+TG Y++E
Sbjct: 90 FITEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRRTGKYNIE 132
>gi|258440878|ref|ZP_05690713.1| phage anti-repressor protein [Staphylococcus aureus A8115]
gi|282894662|ref|ZP_06302889.1| antirepressor [Staphylococcus aureus A8117]
gi|257852392|gb|EEV76313.1| phage anti-repressor protein [Staphylococcus aureus A8115]
gi|282762939|gb|EFC03072.1| antirepressor [Staphylococcus aureus A8117]
Length = 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|82751476|ref|YP_417217.1| phage anti-repressor protein [Staphylococcus aureus RF122]
gi|82657007|emb|CAI81444.1| phage anti-repressor protein [Staphylococcus aureus RF122]
Length = 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|329113762|ref|ZP_08242535.1| Hypothetical protein APO_0538 [Acetobacter pomorum DM001]
gi|326696918|gb|EGE48586.1| Hypothetical protein APO_0538 [Acetobacter pomorum DM001]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T FE +++ V+ D W + + V L + A+ + + + T GG Q
Sbjct: 7 TAMTFEGHELE-WVECDGRPWLLGRAVCDVLEIQRHRSALEKLDENEKRLVTIPTAGGPQ 65
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
KV +SE +Y L S P A++F RWV EEVLP +R+TG Y
Sbjct: 66 KVVAVSESGLYYLTFASRKPVAKRFRRWVTEEVLPQIRRTGEY 108
>gi|319894711|gb|ADV76522.1| phage anti-repressor protein [Staphylococcus phage TEM126]
Length = 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|66395309|ref|YP_239604.1| ORF016 [Staphylococcus phage 69]
gi|148717850|ref|YP_001285322.1| antirepressor [Staphylococcus phage 80alpha]
gi|282919842|ref|ZP_06327574.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|62635660|gb|AAX90771.1| ORF016 [Staphylococcus phage 69]
gi|103058636|gb|ABF71579.1| antirepressor [Staphylococcus phage 80alpha]
gi|282316480|gb|EFB46857.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
Length = 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|90592794|ref|YP_529747.1| BRO-B [Agrotis segetum nucleopolyhedrovirus]
gi|71559244|gb|AAZ38243.1| BRO-B [Agrotis segetum nucleopolyhedrovirus]
Length = 350
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 34/162 (20%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------C---KGVAKRYPL- 57
EFE +R +VD D + FV KD+A L YEN +AI H C K AK L
Sbjct: 15 EFE---LRYVVDNDMQVLFVGKDIARVLKYENHEQAIRKHVDEKYKCFFEKQGAKNEHLA 71
Query: 58 ---KTEGGIQKVR-------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
K + I++V +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 72 QFDKNKSIIREVVKQGDPLYLHPQTILITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQV 131
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
TG Y+ + + LR++K + + ++ KD QL
Sbjct: 132 LCTGKYT--SAIIDGDDEKQALRLYKDFQAVVQK---KDEQL 168
>gi|66395387|ref|YP_239685.1| ORF017 [Staphylococcus phage 53]
gi|151221207|ref|YP_001332029.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|257433185|ref|ZP_05609543.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
E1410]
gi|62635737|gb|AAX90848.1| ORF017 [Staphylococcus phage 53]
gi|104641722|gb|ABF73100.1| phage anti-repressor [Staphylococcus aureus phage phiNM2]
gi|150374007|dbj|BAF67267.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|257281278|gb|EEV11415.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
E1410]
Length = 262
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT V+ + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRT-VEIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVE 110
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATD 118
>gi|327198723|emb|CCA61424.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 329
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRY--PLKT--EG 61
F F+ N ++ + DQ WF AKDV LGY + H K V +Y PL +G
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDKGIVKTHINKYVPDKYKKPLGAICQG 92
Query: 62 GIQKVR-----------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
GI+ V I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++
Sbjct: 93 GIRGVYHPINGNDAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQAMETI 151
>gi|295402354|ref|ZP_06812309.1| prophage antirepressor [Geobacillus thermoglucosidasius C56-YS93]
gi|294975627|gb|EFG51250.1| prophage antirepressor [Geobacillus thermoglucosidasius C56-YS93]
Length = 206
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+TI E+ ++IR I + W VAKDVA+ALGY ++ + + + L T
Sbjct: 1 MNTIRIEEWNGHQIRFIEKLPGDWWAVAKDVASALGYNHTPSMVRMLDQDEKGVHILHTP 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
GG QK+ IISE +Y + S P A+ F++WV ++ + LR+
Sbjct: 61 GGNQKMTIISETGIYEAIWNSRKPEAKDFKKWV-KQTIKALRQA 103
>gi|206599925|ref|YP_002241731.1| gp46 [Mycobacterium phage Fruitloop]
gi|206287013|gb|ACI12359.1| gp46 [Mycobacterium phage Fruitloop]
Length = 334
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
F+ + +R + DQ W VAKDV A G +AI + T GG Q++
Sbjct: 85 FDGHDVRHVF-TDQPYW-VAKDVCEAAGISKYRDAIVQLDDDERVYLFVDTPGGPQRMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++E V+ LL+ S P + F+RW+ EVLP++RKTG YS
Sbjct: 143 VTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYSA 183
>gi|241894860|ref|ZP_04782156.1| possible antirepressor [Weissella paramesenteroides ATCC 33313]
gi|241871868|gb|EER75619.1| possible antirepressor [Weissella paramesenteroides ATCC 33313]
Length = 333
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------PLKTE-- 60
FE +R ++ D+ WFV KDVA LGY + +A+ H ++ P T+
Sbjct: 10 FEGKDVRQVMIDDEP-WFVGKDVAEVLGYAKAKDAVVKHVDNEDRKMGPQVGAPSITDSL 68
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q I+E +Y ++ ++ S A+KF+RW+ EVLP +RK G+Y E
Sbjct: 69 GREQYPIFINESGIYSMIWDASKQSRNPQMKEQAKKFKRWLTTEVLPDIRKHGAYMTEEV 128
Query: 113 KLRATSASTVLRVHKHLE-ELAKQAGLKDNQLLLKVNRGVTKITGV 157
L S T++RV L+ E A A L+++ + + G + GV
Sbjct: 129 LL---SPETLIRVATDLKNERALTAKLQEDAKVALIMEGSKESMGV 171
>gi|219870814|ref|YP_002475189.1| putative antirepressor protein [Haemophilus parasuis SH0165]
gi|219691018|gb|ACL32241.1| putative antirepressor protein [Haemophilus parasuis SH0165]
Length = 281
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN--------AHCKGVAK 53
+ ++ F FE + IR I ++ WFVAKDV LG +N +A+ G+ +
Sbjct: 5 TQLSTFNFEQSSIRVIAVNNEP-WFVAKDVCDTLGIKNPTQALENLDEDERAMFNIGLDQ 63
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGS 106
R + + + ++ I+SE +Y L++ K ++P +F +WV EVLP +RKTGS
Sbjct: 64 R--VNFDNRVSEINIVSESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPQIRKTGS 119
Query: 107 YS 108
Y+
Sbjct: 120 YT 121
>gi|285002412|ref|YP_003422476.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343672|gb|ACH69487.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 509
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 27/170 (15%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-----------YPLKTEGGIQKV 66
V+KD+ + +A LGY+ +AI H + ++ P T K+
Sbjct: 22 VEKDK-FMYGGHGIAEFLGYKLPAKAIRDHVRTEWRKNWEEIQRGLNQTPCMTSSNYTKL 80
Query: 67 RI--------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ ISE VY L+++S LP+A++F W+FE+VLP LRKTG Y V+ ++ +S
Sbjct: 81 PVNWHPHTVFISEAGVYALIMRSKLPTAEEFRSWLFEKVLPELRKTGKYCVQ-DYVQQSS 139
Query: 119 ASTVLRVHKHLEELAK---QAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
++ ++ K L + Q L++ Q++ K + +I ++Q A+ I
Sbjct: 140 STEIVNYDKKLADAQMEVLQLKLENTQIVAKYD---ARIAEINQQHALVI 186
>gi|227486476|ref|ZP_03916792.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
gi|227235524|gb|EEI85539.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 37 YENSNEAINAHC----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
Y N +AI H KGV K T GGIQ + II+E +Y L++ S LP A+ F+ W
Sbjct: 1 YVNPRKAIYDHVDEEDKGVTK---WNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAW 57
Query: 93 VFEEVLPTLRKTGSY 107
V EVLP++RK G Y
Sbjct: 58 VTREVLPSIRKNGGY 72
>gi|77462158|ref|YP_351662.1| hypothetical protein RSP_1616 [Rhodobacter sphaeroides 2.4.1]
gi|77386576|gb|ABA77761.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 151
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 23 NIWFVAKDVATALGYE--------NSNEAINAHCKGVAKRYPLK----TEGGIQKVRIIS 70
N WF+ +DV ALGY N + A A+ Y ++ + G ++V +IS
Sbjct: 7 NPWFILRDVLIALGYNLGPRTQTPNVSVAARKLASDEAQLYRIQVKVVSRSGAREVMLIS 66
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
E + +L+++ P A+KF+ WV EVLP++RKTG+Y++
Sbjct: 67 ESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKTGTYTM 105
>gi|303233996|ref|ZP_07320645.1| toxin-antitoxin system, toxin component, Bro family [Finegoldia
magna BVS033A4]
gi|302494921|gb|EFL54678.1| toxin-antitoxin system, toxin component, Bro family [Finegoldia
magna BVS033A4]
Length = 256
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E +IRT V K+ WFVA DV AL N + + ++ L +G I+
Sbjct: 11 EFGEIRT-VTKNNEPWFVAIDVCNALELSNPTVVVGRLDEDERTKFNLGRQG---MTNIV 66
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATSASTVLRVHKH 128
SE +Y L++ S A+KF+RW+ EV+P++RK G+Y S E + + ++R+ +
Sbjct: 67 SEYGLYNLILASRKKEAKKFKRWITHEVIPSIRKHGAYMSSEVIEKTLSDPDYLIRLATN 126
Query: 129 LEELAKQAGLKDNQL 143
L+E + L + Q+
Sbjct: 127 LKEEKAKRALAEAQI 141
>gi|257784359|ref|YP_003179576.1| prophage antirepressor [Atopobium parvulum DSM 20469]
gi|257472866|gb|ACV50985.1| prophage antirepressor [Atopobium parvulum DSM 20469]
Length = 269
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 21/107 (19%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----------RYPLKTE 60
++R + D D WF+A+DV ALG + + C V+ R PL
Sbjct: 15 GELRALKDLDGEPWFIAQDVCRALGTDVKDVRSVLECDEVSNLDTIEVYKKPGRSPL--- 71
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+SE +Y L+++S P A+ F RWV EVLP++R++G Y
Sbjct: 72 -------IVSEAGLYNLVLRSRKPEAKPFRRWVTHEVLPSIRRSGGY 111
>gi|228990367|ref|ZP_04150332.1| Prophage antirepressor [Bacillus pseudomycoides DSM 12442]
gi|228768893|gb|EEM17491.1| Prophage antirepressor [Bacillus pseudomycoides DSM 12442]
Length = 246
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E ++R+I + + I+FVAKDV+ L + ++ A + +
Sbjct: 2 MNNLLVFDHEELGQVRSI-KQGEEIYFVAKDVSDILEFRDAYTATRGLDDDEKLLHTIYV 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRAT 117
G ++V +I+E +Y L++ S P A+ F++W+ EVLP++RK G Y V E +A
Sbjct: 61 AGQNREVTLINESGLYGLILTSRKPQAKAFKKWITSEVLPSIRKDGGYLVTTEEDDEQAI 120
Query: 118 SASTVLRVHKHLE 130
A +L + LE
Sbjct: 121 MAKALLLAQRTLE 133
>gi|209170995|ref|YP_002268142.1| BRO-D [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436586|gb|ACI28813.1| BRO-D [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 353
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 13/100 (13%)
Query: 24 IWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPLKTEGGIQKVRI--------ISEP 72
WF AK+ A A+GYE + E I+ + + + E I + +SEP
Sbjct: 34 FWFAAKEFAKAMGYEKPQAAFEKIDIKYRRKYEEFDQPREMAIDDSSLLIHPHTVFVSEP 93
Query: 73 DVYRLLVKSTLPSA--QKFERWVFEEVLPTLRKTGSYSVE 110
+Y++++ S L + ++F+ WVFE VLPT+RKTG Y++E
Sbjct: 94 GLYQMVLSSKLKNVRVEQFKSWVFEVVLPTIRKTGRYNIE 133
>gi|188496421|ref|ZP_03003691.1| BRO family, N- domain protein [Escherichia coli 53638]
gi|188491620|gb|EDU66723.1| BRO family, N- domain protein [Escherichia coli 53638]
gi|323172040|gb|EFZ57682.1| BRO family, N-terminal domain protein [Escherichia coli LT-68]
Length = 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 2 STITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVA 52
+ I F+F+S+ +R++V D WF A D+ ALG N S ++I+ K
Sbjct: 26 NNIKVFDFKSSTGELLSSVRSVV-IDSTPWFFAVDICNALGLTNTAISLQSIDDEDKTEY 84
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K Y G +K +++E +Y L++KS A++F+RW+ EV+P++RKTG+Y +
Sbjct: 85 KDYL----GSGRKPLLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNYCL 137
>gi|18249879|ref|NP_543067.1| hypothetical protein P27p15 [Enterobacteria phage phiP27]
gi|18152346|emb|CAC83533.1| hypothetical protein [Enterobacteria phage phiP27]
Length = 274
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 2 STITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVA 52
+ I F+F+S+ +R++V D WF A D+ ALG N S ++I+ K
Sbjct: 3 NNIKVFDFKSSTGELLSSVRSVV-IDSTPWFFAVDICNALGLTNTAISLQSIDDEDKTEY 61
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K Y G +K +++E +Y L++KS A++F+RW+ EV+P++RKTG+Y +
Sbjct: 62 KDYL----GSGRKPLLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNYCL 114
>gi|257440157|ref|ZP_05615912.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
gi|307693733|ref|ZP_07635970.1| putative antirepressor [Ruminococcaceae bacterium D16]
gi|257197509|gb|EEU95793.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG---GIQKVRIISEPDVYRLLVKS 81
WFVA DV AL NS++AI+ + EG G + +++EP +Y L++ S
Sbjct: 26 WFVAVDVCRALEIGNSSQAISRLDADEKMITLISNEGNKRGNPNMTVVNEPGLYTLILSS 85
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
P A+ F+RW+ +V+P +RKTG Y ++
Sbjct: 86 RKPEAKAFKRWITHDVIPMIRKTGGYMTDS 115
>gi|301028408|ref|ZP_07191654.1| BRO family protein [Escherichia coli MS 196-1]
gi|299878519|gb|EFI86730.1| BRO family protein [Escherichia coli MS 196-1]
Length = 138
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 11/116 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK----- 58
I+ +F+ ++R IV + WFV DV AL N +A++ L
Sbjct: 13 ISVIKFDDIQVR-IVSINGEPWFVGADVCAALEISNVTDAVSVLDNDEVMTLALTEGHSG 71
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSV 109
GG + ++SE Y+L+ +S S A +F WVF EV+P++RKTGSY V
Sbjct: 72 KRGGARSWNVVSESGFYKLIARSRKASTPGTFAHRFSNWVFREVIPSIRKTGSYGV 127
>gi|259906745|ref|YP_002647101.1| Putative antirepressor protein encoded by prophage CP-933N [Erwinia
pyrifoliae Ep1/96]
gi|224962367|emb|CAX53822.1| Putative antirepressor protein encoded by prophage CP-933N [Erwinia
pyrifoliae Ep1/96]
gi|283476531|emb|CAY72359.1| Uncharacterized protein HI1418 [Erwinia pyrifoliae DSM 12163]
Length = 195
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TEGG 62
IT F+ ++R IV+ + WF+ KD+ AL + A+ G K L T GG
Sbjct: 31 ITVIRFDGVQVR-IVNINGEPWFMVKDICAALEMADHLVALR-RLDGDEKGECLTPTPGG 88
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSV 109
Q +R + E Y+L+ +S S A +F W+F EV+P++RKTG+Y V
Sbjct: 89 NQVMRTVRESGFYKLITRSRKASTPGTFAHRFSNWIFREVIPSIRKTGAYGV 140
>gi|86355664|ref|YP_473332.1| BRO-e [Hyphantria cunea nucleopolyhedrovirus]
gi|86198269|dbj|BAE72433.1| BRO-e [Hyphantria cunea nucleopolyhedrovirus]
Length = 343
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 26/128 (20%)
Query: 4 ITPFEF--ESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
I F+F ++ +R +++++Q + FVAKDVATAL YEN+ E++ H V +Y E
Sbjct: 6 IGQFKFGEDTFTLRYVLERNQQQVKFVAKDVATALKYENTTESVRKH---VDVKYKTTFE 62
Query: 61 GGIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
G Q +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 QGEQFTLPAFNSVAKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQ 122
Query: 101 LRKTGSYS 108
+ TG Y
Sbjct: 123 VLCTGKYD 130
>gi|22549460|ref|NP_689233.1| BRO-B [Mamestra configurata NPV-B]
gi|22476639|gb|AAM95045.1| BRO-B [Mamestra configurata NPV-B]
Length = 348
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
ISE V+ L+++S LP+A++F+RW+FEEVLP LRKTG Y + +AS V+ K
Sbjct: 90 FISEAGVWALIMRSKLPAAEEFQRWLFEEVLPELRKTGKYDMR------KAASEVVNYDK 143
Query: 128 HLEE 131
L E
Sbjct: 144 KLAE 147
>gi|39996813|ref|NP_952764.1| BRO family protein, truncation [Geobacter sulfurreducens PCA]
gi|39983701|gb|AAR35091.1| BRO family protein, truncation [Geobacter sulfurreducens PCA]
Length = 101
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPLKTEGGIQKVRIISEPD 73
+V D WFVA DV L +N ++A++A KG+ Y T GG QKV +I+EP
Sbjct: 3 VVMIDNEPWFVAADVCKVLEIQNVSKAVSALDPDEKGLTTSY---TPGGPQKVTVINEPG 59
Query: 74 VYRLLVKSTLPSAQKFERW 92
+Y L++ S PSA++F+RW
Sbjct: 60 LYSLIMTSRKPSAKQFKRW 78
>gi|327198690|emb|CCA61391.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 353
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 16/114 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTE---GG 62
F FE+N ++ + +Q WF AKDV LGY ++ I N K + ++Y L E GG
Sbjct: 52 FSFENNIVKMVGTFEQ-PWFRAKDVLKVLGYSDARNTIKNQIHKYIPEKYKLVYEEIKGG 110
Query: 63 IQKVR-----------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ +V I+EP +YRL+++S P+AQ F+ +V + +LP +RK
Sbjct: 111 LLRVDHPVNGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQA 164
>gi|168756431|ref|ZP_02781438.1| Gp27 [Escherichia coli O157:H7 str. EC4401]
gi|168770147|ref|ZP_02795154.1| Gp27 [Escherichia coli O157:H7 str. EC4486]
gi|195937930|ref|ZP_03083312.1| antirepressor [Escherichia coli O157:H7 str. EC4024]
gi|189356511|gb|EDU74930.1| Gp27 [Escherichia coli O157:H7 str. EC4401]
gi|189361009|gb|EDU79428.1| Gp27 [Escherichia coli O157:H7 str. EC4486]
gi|326338722|gb|EGD62542.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1125]
Length = 193
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCKGVAKRYPLKTEGGIQ 64
F+S +R +V + + WFVAKDV AL NS +A+ A K VA Y ++ G
Sbjct: 30 FDSVNVR-VVYLNGDPWFVAKDVCVALEISNSRDALKALDADEKKTVALSYGIR---GNP 85
Query: 65 KVRIISEPDVYRLLVKS---TLPS--AQKFERWVFEEVLPTLRKTGSYSV 109
+ISE Y+L+ +S P A +F WVF V+P +RKTG+Y +
Sbjct: 86 NHSLISESGFYKLIARSRKAVTPGTFAHRFSNWVFRNVIPGIRKTGAYGI 135
>gi|167465069|ref|ZP_02330158.1| BRO-like protein [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 109
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ + F F +R I+ Q WFV KDV + L N V+ Y + +
Sbjct: 1 MNQLQVFNFTGKDVRMIMKGGQP-WFVLKDVCSILELSNPRMVKERLSDDVSSTYSIPDS 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
G +Q II+E +Y ++++S A++F +WV +VLP++RKTG Y+
Sbjct: 60 LGRLQPTTIINEDGLYDVILESRKSEAREFRKWVTRDVLPSIRKTGMYA 108
>gi|301046392|ref|ZP_07193552.1| BRO family protein [Escherichia coli MS 185-1]
gi|300301618|gb|EFJ58003.1| BRO family protein [Escherichia coli MS 185-1]
Length = 279
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 2 STITP--FEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
+ +TP F FES IR IV D N WFVAKDV AL N +I + ++ L
Sbjct: 54 ANVTPSVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLG 112
Query: 59 TEGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
+G + II+E +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 113 RQG---ETNIINESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 163
>gi|298381702|ref|ZP_06991301.1| anti-repressor protein [Escherichia coli FVEC1302]
gi|298279144|gb|EFI20658.1| anti-repressor protein [Escherichia coli FVEC1302]
Length = 241
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 17/115 (14%)
Query: 7 FEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA------HCKGVAKRYPLKT 59
F+FES N IR+I+ D WFVA+DV +AL +N +A+ + +
Sbjct: 14 FKFESVNPIRSII-IDGQPWFVAQDVCSALRIQNVTQALEKLDDDERSMFNIGHEHRAIF 72
Query: 60 EGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ++++ IISE +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 73 DSRVKEINIISESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 125
>gi|300898444|ref|ZP_07116785.1| BRO family protein [Escherichia coli MS 198-1]
gi|300357911|gb|EFJ73781.1| BRO family protein [Escherichia coli MS 198-1]
Length = 228
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Query: 2 STITP--FEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
+ +TP F FES IR IV D N WFVAKDV AL N +I + ++ L
Sbjct: 3 ANVTPSVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLG 61
Query: 59 TEGGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSY 107
+G + II+E +Y L+++ T+P +F +WV EVLP +R+TGSY
Sbjct: 62 RQG---ETNIINESGLYTLILRCRDAVTPGTIP--YRFRKWVTGEVLPQIRRTGSY 112
>gi|13242588|ref|NP_077602.1| EsV-1-117 [Ectocarpus siliculosus virus 1]
gi|13177391|gb|AAK14535.1|AF204951_117 EsV-1-117 [Ectocarpus siliculosus virus 1]
Length = 524
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 45/245 (18%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNI--WFVAKDVATALGYENSNEA-INAHCKGVAKRYPL 57
M + F F + + + ++ +D+N F A D+ L +N + + I+ H A R
Sbjct: 1 MDILQTFVFNNTRHKVVILRDENDDPLFKASDIGKILSIKNIHTSMIDLHDDDKAIR-TA 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE------- 110
T GG QK ++E VY+L+++S P A+ F+ WVF EVL T+RK G Y +E
Sbjct: 60 STPGGEQKTVFVTEKGVYKLIMRSRKPVAKPFQDWVF-EVLKTIRKRGKYVLEEEIAGLK 118
Query: 111 ---APKLRATSASTVL-----------RVHKHLEE---------LAKQAGLKDNQLLLKV 147
A +L A R+HK L + K ++DN +L+K+
Sbjct: 119 RKHAEELADADADAKSLARKYIDAEDERMHKTLVQGFDNKTCIYFGKIQTMEDNSVLVKI 178
Query: 148 NRGVTK-----ITG-VDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLK 201
G TK TG V++ +M I + D Y + + N +R RF + K
Sbjct: 179 --GSTKNIRARTTGLVNEFGSMAIFRIFEC--DRYEEFEKSLHKHNDIKRYRFKKPINGK 234
Query: 202 RGLQV 206
R ++V
Sbjct: 235 RSMEV 239
>gi|304389858|ref|ZP_07371817.1| phage antirepressor protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304327034|gb|EFL94273.1| phage antirepressor protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 260
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
++R+ DQ WF+A D+ AL N + A++ ++ L GG ++EP
Sbjct: 15 QVRSFTANDQT-WFIATDICQALDLTNPSVAVSRLDADEKAKFNLGFSGG--ATWCVNEP 71
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+Y L++ S A+ F+RWV EVLP++R+ G Y+ +
Sbjct: 72 GLYALIMASRKSEAKAFKRWVTHEVLPSIRRYGLYATD 109
>gi|192824244|ref|YP_001994885.1| gp68 [Mycobacterium phage Pukovnik]
gi|190610474|gb|ACE79994.1| gp68 [Mycobacterium phage Pukovnik]
Length = 271
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 1 MSTITPFEFES-----------NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK 49
MS I F+F++ N +V + WFVAKDV LG N ++
Sbjct: 12 MSEIEKFQFQNVPSADEGGLVINAEVRVVTIEGEPWFVAKDVCEVLGLTNPTVVVSRLDA 71
Query: 50 GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++ L +++E +Y L+V+S P A+ F +WV EVLPT+RKTG Y
Sbjct: 72 DERAKFDLGPFA--PAANVVNESGLYALIVRSDKPQAKAFRKWVTSEVLPTIRKTGGY 127
>gi|227431808|ref|ZP_03913835.1| prophage antirepressor [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352491|gb|EEJ42690.1| prophage antirepressor [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 268
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG-GIQKVR 67
F++ K++ +++ + F A+ A LG + + +Y T G +++
Sbjct: 14 FDNLKVK---EENGQVLFDAESAAIGLGITDEKSGLTYVRWNRVNKYLFATSGENVKRGD 70
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVH 126
I+EP Y+L +K+ +A+KF+ WV EVLP +R+ G+Y + T+ T++R+
Sbjct: 71 FITEPQFYKLAIKANNETAEKFQDWVTSEVLPAIRQHGAYLTDQKIEEVLTNPDTIIRLA 130
Query: 127 KHLEELAKQAGL---KDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
L+E +QA L + N +LL+ N + K VD + A N +TIT I
Sbjct: 131 TELKE-ERQAKLVLKQQNSVLLQQNNELKPKADYVDSILA----------NKSLVTITFI 179
Query: 183 GERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ A +NKLL G+Q ++ SG + K +++G
Sbjct: 180 AKDYGMSGTA--MNKLLHDLGVQYNQ-SGIWLLYAKHQKKG 217
>gi|87125770|ref|ZP_01081613.1| hypothetical protein RS9917_00100 [Synechococcus sp. RS9917]
gi|86166579|gb|EAQ67843.1| hypothetical protein RS9917_00100 [Synechococcus sp. RS9917]
Length = 255
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 17/250 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + P+ FE ++IR D+ W V D AL S A + + + L +E
Sbjct: 5 SALVPYLFEGHRIRVSTDQQGEAWIVVADACAALA--ESPMAWAMANRRDEEEHCLHSEE 62
Query: 62 GIQK----VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK--LR 115
G + +I E + R L+ S SA++ RW+ ++LP+L++ + E P+ +
Sbjct: 63 GPGADGFTLALIHEATLLRRLLNSDNASARRMRRWLTHDLLPSLQRRQEGNGELPRRSIE 122
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND- 174
A T V + +E+ + G+ + LL V + +I A D+K S
Sbjct: 123 AIRRQTAAEVLRGADEIIQLTGVSHAEALLSV---LEEIQAHSSPAASDLKQRVSQRAAV 179
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+LT Q+ +RL R N+ L GLQ ++ T G + G + P+
Sbjct: 180 VWLTANQVADRLEGT--LRHTNQRLATAGLQQRNEDDDWQLTEAGRDWGVAL---PLCSR 234
Query: 235 EGSTQQLKWN 244
QQ+ W+
Sbjct: 235 VERRQQILWD 244
>gi|327198673|emb|CCA61374.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 329
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQK 65
F F N ++ + DQ WF AKDV LGY A +H + V RY +
Sbjct: 34 FSFHDNSVKMVGTLDQ-PWFKAKDVLKVLGYSEEKSATKSHIQRCVPDRYKKDLTDIFKG 92
Query: 66 VRI---------------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
RI I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 GRIGCGHPIDGNEGREVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AME 149
Query: 111 APKLRATSASTVLRV 125
R T+ T LR+
Sbjct: 150 TILNRNTALDTNLRL 164
>gi|126652777|ref|ZP_01724929.1| putative antirepressor [Bacillus sp. B14905]
gi|126590466|gb|EAZ84585.1| putative antirepressor [Bacillus sp. B14905]
Length = 271
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 38/221 (17%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQKVRIISEPDVY 75
IVD + +F A DVA +L Y+ A+ HC Y + T+GG Q+ I+ +V
Sbjct: 21 IVDGKE--YFGATDVAKSLEYKQPEHAVKNHCDSEGCISYTVPTDGGKQQKNFITLGNVS 78
Query: 76 RLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS--ASTVLRV 125
RL+V ++ S A+ +E+W+F+EV+P++ K G Y + A ++
Sbjct: 79 RLIVAASKQSKNPEIQQKAKVYEKWIFDEVIPSVHKQGGYIATTDDDDDETIMAKALILA 138
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD----IKHLPSSDNDEYLTITQ 181
K +++ KQ + + Q +++V R K+ D +E + +K L + + + I +
Sbjct: 139 QKTIKK--KQYEILEQQRIIEVQR--PKVVYADAVEVSEDTVLVKDLATVLRQKGVNIGE 194
Query: 182 I----------------GERLN-PPQRARFLNKLLLKRGLQ 205
+ GE N P QR+ L +++K GL+
Sbjct: 195 VRLFKWLRENGYLCKQKGEMWNMPTQRSLELGVIVVKHGLR 235
>gi|9630999|ref|NP_047669.1| Ld-bro-b [Lymantria dispar MNPV]
gi|3822267|gb|AAC70218.1| Ld-bro-b [Lymantria dispar MNPV]
Length = 323
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 28/144 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F E +R ++++DQ+I FVAKDVA +L Y + +A+ + V +Y E
Sbjct: 6 IGQFKFGEEEFTLRYVLERDQSIKFVAKDVAASLKYVDCKQAVRIN---VDDKYKFTFEQ 62
Query: 62 GI--------------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 GCVPHTLASDSVAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 122
Query: 102 RKTGSYSVEAPKLRATSASTVLRV 125
TG Y AP ++ ++ ++++
Sbjct: 123 LCTGKY---APAVKMDTSGALVKI 143
>gi|15674990|ref|NP_269164.1| putative phage associated antirepressor [Streptococcus phage 370.3]
gi|13622137|gb|AAK33885.1| putative antirepressor - phage associated [Streptococcus phage
370.3]
Length = 248
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKTEGGIQKVRIISE 71
++RT +Q I+F D L N + I K GV + + G Q+ I+E
Sbjct: 13 EVRTATINNQ-IYFNLNDCCQILELSNPRKTIERLNKDGVTTSDIIDSLGRTQQANFINE 71
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHKHL- 129
+ Y+L+ +S P A+KF WV EVLP++RK G+Y E +A TS ++R+ L
Sbjct: 72 SNFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSPDFLIRLANELK 131
Query: 130 EELAKQAGLKDNQLLLKVNRGVTK 153
EE + L+ + +L V V K
Sbjct: 132 EEKERSRQLEAEKSILSVENMVMK 155
>gi|285002433|ref|YP_003422497.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343693|gb|ACH69508.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 473
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
Query: 31 VATALGYENSNEAINAHCK-----------GVAKRYPLKTEGGIQKVRI--------ISE 71
+A LGY A+ H K G + PL T + + ISE
Sbjct: 34 IAQFLGYVKPRNALQQHVKPAWRKNWEEIKGALNQGPLVTSLAQDNIPVNWQPNTVFISE 93
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
VY L+++S LP+A++F+RW+FEEVLP +R TG Y+
Sbjct: 94 AGVYALIMRSKLPAAEEFQRWLFEEVLPEIRNTGKYA 130
>gi|167856689|ref|ZP_02479375.1| putative antirepressor protein [Haemophilus parasuis 29755]
gi|167852188|gb|EDS23516.1| putative antirepressor protein [Haemophilus parasuis 29755]
Length = 229
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 21/128 (16%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN--------AHCKGVAK 53
+ ++ F FE + IR I ++ WFVAKDV LG +N +A+ G+ +
Sbjct: 5 TQLSTFNFEQSSIRVIAVNNEP-WFVAKDVCDTLGIKNPTQALENLDEDERAMFNIGLDQ 63
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLV-------KSTLPSAQKFERWVFEEVLPTLRKTGS 106
R + + + ++ I+SE +Y L++ K ++P +F +WV EVLP +RKTG
Sbjct: 64 R--VNFDNRVSEINIVSESGMYTLILRCRDAVKKGSVP--HRFRKWVTAEVLPQIRKTGR 119
Query: 107 Y-SVEAPK 113
Y + E P+
Sbjct: 120 YQATERPQ 127
>gi|292397816|ref|YP_003517882.1| BRO-J [Lymantria xylina MNPV]
gi|291065533|gb|ADD73851.1| BRO-J [Lymantria xylina MNPV]
Length = 325
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 26/128 (20%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TE 60
I F+F ++ +R ++ +Q + FVAKDVA++L Y N N+A++ H V K+Y +E
Sbjct: 6 IGQFKFGQDTFTLRYVLGDEQPVKFVAKDVASSLKYGNCNDAVSKH---VDKKYKYTYSE 62
Query: 61 GGIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
G Q ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 HGSQIASLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 122
Query: 101 LRKTGSYS 108
+ TG Y+
Sbjct: 123 VLCTGKYA 130
>gi|33331833|gb|AAQ11141.1| BRO-F [Mamestra configurata NPV-A]
Length = 357
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 14 IRTIVDKDQ-NIWFVAKDVATALGYENSN----EAINAHCKGVAKRYPLKTEGGIQK--- 65
I+ D D+ WF A + A +GY+ + E I+ + +++ + GI
Sbjct: 20 IKEDFDNDKVQFWFAASEFARCMGYQRPDNIILEKIDLKYRKKYEQFHVPETKGITSSTH 79
Query: 66 --VRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVE 110
++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 80 PHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKMD 128
>gi|20070001|ref|NP_613205.1| BRO-f [Mamestra configurata NPV-A]
gi|20043395|gb|AAM09230.1| BRO-f [Mamestra configurata NPV-A]
Length = 357
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
Query: 14 IRTIVDKDQ-NIWFVAKDVATALGYENSN----EAINAHCKGVAKRYPLKTEGGIQK--- 65
I+ D D+ WF A + A +GY+ + E I+ + +++ + GI
Sbjct: 20 IKEDFDNDKVQFWFAASEFARCMGYQRPDNIILEKIDLKYRKKYEQFHVPETKGITSSTH 79
Query: 66 --VRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVE 110
++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 80 PHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKMD 128
>gi|134287309|ref|YP_001111005.1| Bro20 [Heliothis virescens ascovirus 3e]
gi|133722217|gb|ABO37339.1| Bro20 [Heliothis virescens ascovirus 3e]
Length = 191
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR----YPLKTEGGIQKVR--IISEP 72
++D W A A AL Y N + A+ H +R + G + + R I+
Sbjct: 41 ERDGETWLQANPFAMALDYVNVSNAVARHVSSKNQRKYKELETRHRGCVIRARTKFINRA 100
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTV 122
++ L++ S +P A+KF+RWVF ++LP L + G Y + EAP + S + V
Sbjct: 101 GMFELIMSSRMPRARKFQRWVFSDLLPKLCQNGQYDMRTEAPPMIVESMNVV 152
>gi|322412501|gb|EFY03409.1| putative antirepressor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 251
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 25 WFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
+F KD L +NS + + + KGV L T GG Q+ I+E + Y+L+ +S
Sbjct: 24 FFNLKDCCKILEIKNSKDVVKRLNPKGVVTT-DLLTNGGTQQANFINESNFYKLVFQSRK 82
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVE 110
P A+KF WV EVLP++RK G Y +
Sbjct: 83 PEAEKFADWVTSEVLPSIRKRGVYMTD 109
>gi|9627744|ref|NP_054031.1| baculovirus repeated ORF [Autographa californica
nucleopolyhedrovirus]
gi|1175048|sp|P24655|Y002_NPVAC RecName: Full=Uncharacterized Bro-N domain-containing protein ORF2
gi|559071|gb|AAA66632.1| baculovirus repeated ORF [Autographa californica
nucleopolyhedrovirus]
Length = 328
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 25/127 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++DQ + FVAKDVA +L Y ++AI H V +Y E
Sbjct: 6 IGEFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYTVCDKAIRVH---VDNKYKSLFEQ 62
Query: 62 GIQK--------------------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
IQ +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 TIQNGGPTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYS 108
TG Y
Sbjct: 123 LCTGKYD 129
>gi|270296825|ref|ZP_06203024.1| phage antirepressor protein [Bacteroides sp. D20]
gi|270272812|gb|EFA18675.1| phage antirepressor protein [Bacteroides sp. D20]
Length = 257
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F+ E K+R +++++ F DV +G ++++ + V + +P+K
Sbjct: 1 MNNIQIFQNEQFGKVRIAMNENEEPLFCLADVCAVIGIKDTSRCASRLDDDVRQTHPIKD 60
Query: 60 E-GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
G Q+ ++E +Y ++++S A+ F +WV EVLP++RK G+Y + +A T
Sbjct: 61 NLGRTQQATFVTESGLYDVVIRSDSEKAKPFRKWVTSEVLPSIRKHGAYMTQETLEKALT 120
Query: 118 SASTVLRVHKHLEE 131
S ++++ +L+E
Sbjct: 121 SPDFLIQLATNLKE 134
>gi|116326102|ref|YP_803427.1| baculovirus repeated ORF-d [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180840|gb|ABI13817.1| baculovirus repeated ORF-d [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 340
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-------GGIQ- 64
++ T+ D + W VA A AL Y N+AI C+ V+K E G I
Sbjct: 14 EVFTVADDKRENWMVANPFAEALNYSRPNKAI---CEKVSKENVKTLEELRSHRNGAIAS 70
Query: 65 ----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRATS 118
+ + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y +V+AP A
Sbjct: 71 SLHPQTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNMAVDAP---AEI 127
Query: 119 ASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKIT 155
A + VH + + K +KD Q++++ N + +T
Sbjct: 128 AEGMNAVHAAVNDGRKAPWIKDMDAYKQIIVEKNEKIETLT 168
>gi|325299774|ref|YP_004259691.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324319327|gb|ADY37218.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 249
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E +IRT+ D+ WF DV AL + + + V+ T G QK +
Sbjct: 10 EFGEIRTVTDEKGEPWFCLMDVCKALELQTKFVKMRLRDEVVSNNLISDTIGRKQKALFV 69
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+E +Y ++++S P A+ F RWV EVLP +RK G Y
Sbjct: 70 NEDGLYDVILESRKPEARAFRRWVTGEVLPAIRKHGGY 107
>gi|86137843|ref|ZP_01056419.1| hypothetical protein MED193_08273 [Roseobacter sp. MED193]
gi|85825435|gb|EAQ45634.1| hypothetical protein MED193_08273 [Roseobacter sp. MED193]
Length = 150
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN---EAINAHCKGVAKRYPLKTE 60
++ ++F +R +V D WFVA D LG +N K + R L
Sbjct: 30 VSTYDFNGLSLR-VVQIDGEPWFVAIDALKTLGISRHGGVLNPLNEDEKTMRGRTSLGLG 88
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP-----TLRKTGSYSVEAPKLR 115
G + + +ISE +Y+L+ +S P A+ F+ WV +VLP T+RKTGSYS+ L
Sbjct: 89 HG-RPINLISESGLYKLITRSDKPEAKPFQEWVTRDVLPSVRLTTIRKTGSYSLTDSALS 147
Query: 116 ATS 118
S
Sbjct: 148 MAS 150
>gi|118465500|ref|YP_880112.1| gp54 protein [Mycobacterium avium 104]
gi|118166787|gb|ABK67684.1| gp54 protein [Mycobacterium avium 104]
Length = 263
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRY-- 55
MS + F +E +RT++ + + WFVA D L ++ A ++ K + R
Sbjct: 1 MSAVELFRYEGAHLRTVLVESEP-WFVAADACRMLSLRDTTSAMKMVHDDDKRLLHRSDT 59
Query: 56 PLKTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
P EG +Q + +++E +Y L+ +S A+ RWV EVLP++RKTGSY AP
Sbjct: 60 PQLFEGIAAQVQVITVVNESGMYALIFQSNKDRARDVRRWVTSEVLPSIRKTGSYG--AP 117
Query: 113 KL 114
L
Sbjct: 118 VL 119
>gi|46402113|ref|YP_006607.1| Gp27 [Klebsiella phage phiKO2]
gi|40218257|gb|AAR83043.1| Gp27 [Klebsiella phage phiKO2]
Length = 260
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ++ F F+ N +V + WFVAKD+ AL NS +A+++ L ++
Sbjct: 1 MNALSVFSFQENHPVRVVLVNGEPWFVAKDICDALKLVNSRKALSSLDDDEKNTVTL-SD 59
Query: 61 G--GIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G G + IISE +Y L+++ +A +F +WV EVLP +RK+G YS P
Sbjct: 60 GNRGNPNMSIISESGLYTLILRCRDAVKQGTTAWRFRKWVTNEVLPAIRKSGEYSYVEP 118
>gi|327198768|emb|CCA61469.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 365
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F F+ N ++ + DQ WF AKDV LGY +A H + K G I KV
Sbjct: 56 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDKKATQNHVQRCVPDKYKKYLGEIIKV 114
Query: 67 R----------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++
Sbjct: 115 AHIRCGQPVSYQEGREVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQAMDTI 173
>gi|148368838|ref|YP_001256968.1| bro-1 [Spodoptera litura granulovirus]
gi|147883351|gb|ABQ51960.1| bro-1 [Spodoptera litura granulovirus]
Length = 471
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 1 MSTITPFEFESNKIR--TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
MSTIT +++ IR +IVD + +W++A A L Y N + A++ ++ +
Sbjct: 1 MSTITVYKYGEEYIRVVSIVDNNSEVWYLANPFAKVLNYSNYHNAVSKLVSPQNQKQLMN 60
Query: 59 TEGGIQ------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + I++ ++ L+ S +P AQ+F+ WV ++L L KTG YS+
Sbjct: 61 IDNNDNFKSLHPYSKFINQAGLFELIQSSCMPKAQQFKDWVTSKLLTRLCKTGKYSM 117
>gi|229120896|ref|ZP_04250138.1| hypothetical protein bcere0016_12050 [Bacillus cereus 95/8201]
gi|228662556|gb|EEL18154.1| hypothetical protein bcere0016_12050 [Bacillus cereus 95/8201]
Length = 105
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 27 VAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSA 86
VA D+ ALG + + + CK + K YP+ T GG Q + +I DV +++KS +P A
Sbjct: 27 VASDITQALGNQKKSN-VTKSCKNIIK-YPIPTNGGKQMMNVIPFKDVQHIIIKSKMPRA 84
Query: 87 QKFERWVFEEVLPTLR 102
+ FE W +E+LP ++
Sbjct: 85 ESFEEWAEQELLPLMQ 100
>gi|327198660|emb|CCA61361.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 310
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLKTEGGIQ- 64
F F+ N ++ + DQ WF AKDV LGY + + K V +Y + GG++
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDSHTLKKQIQKYVPDKYKQQL-GGLRD 91
Query: 65 ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
K I+EP +YRL+++S P++Q F+ +V + +LP +RK ++E
Sbjct: 92 GGHPINGNEAKEVYINEPGLYRLIMRSNKPNSQPFQDYVQDVLLPNMRKQ---AMETLLN 148
Query: 115 RATSASTVLR--VHKHLEELAKQAGL 138
R TS LR + ++ + LAK A +
Sbjct: 149 RNTSLENNLRLVIRQNTQALAKLAEM 174
>gi|215401542|ref|YP_002332770.1| BRO-1 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484083|gb|ACI47516.1| BRO-1 [Spodoptera litura nucleopolyhedrovirus II]
Length = 369
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 27/132 (20%)
Query: 8 EFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ-- 64
EFE +R I++ D ++FVAKD+AT L YEN+ +A+ H V ++Y + Q
Sbjct: 15 EFE---LRYIINNHDMQVYFVAKDIATLLKYENTKKAVTDH---VDEKYKMVYSDDSQPE 68
Query: 65 ------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ +I++ V +L++KS L A + + W+ E+V+P + TG
Sbjct: 69 SVIVNNLLVHSNILYLHPQTVLINKSGVIQLIMKSKLSYAVELQEWLLEDVIPQVLCTGK 128
Query: 107 YSVEAPKLRATS 118
YS A T+
Sbjct: 129 YSASAALTTGTA 140
>gi|87303186|ref|ZP_01085984.1| hypothetical protein WH5701_06766 [Synechococcus sp. WH 5701]
gi|87282353|gb|EAQ74313.1| hypothetical protein WH5701_06766 [Synechococcus sp. WH 5701]
Length = 254
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE- 60
S + P+ FE ++IR D+ W V D AL A+ G + L +E
Sbjct: 5 SALVPYLFEGHRIRVSTDQQGEAWIVVADACAALAESPMVWAVAIQRDG---EHCLHSEE 61
Query: 61 ----GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT-------GSYSV 109
GG + +I+E + R L+ S PSA + RW+ E+LP ++++ G+ S+
Sbjct: 62 GPGAGGF-TLAMINEAALLRRLLNSDNPSAPRMRRWLTHELLPAIQRSQQRTAAQGARSI 120
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-L 168
EA +R +A+ VLR +E+ G+ + LL + +I +++
Sbjct: 121 EA--IRRQTAAEVLR---GADEIIHLTGVSHAEALLSA---LEEIQANSSPAGAEVQQRF 172
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFL---NKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
+LT Q+ ERL+ R L N+ L GLQ ++ T G + G
Sbjct: 173 SHRAGVAWLTADQLAERLD-----RTLLSTNQGLAAAGLQQRNEDDDWQLTEAGRDWG-- 225
Query: 226 MCDVPMQHVEGSTQQLKWN 244
+P+ QQ+ W+
Sbjct: 226 -VTLPLCSRGERRQQILWD 243
>gi|317051595|ref|YP_004112711.1| BRO domain-containing protein [Desulfurispirillum indicum S5]
gi|316946679|gb|ADU66155.1| BRO domain protein [Desulfurispirillum indicum S5]
Length = 511
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 7 FEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAIN--AHCKGVAKRYPLKTEGGI 63
F ++ +RT IVD + F D+ TAL + NS +A+ + V RY L + GG
Sbjct: 11 FNYDGIPVRTDIVDGEP--LFNVNDLCTALEHTNSRKALKDLVDAEDVTVRYTL-SPGGK 67
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
QK ++E ++ L++ S +A+K +RWV EVLP++R+ G+Y + +L
Sbjct: 68 QKANFVTESGMWALILGSRTQAAKKVKRWVTSEVLPSIRRHGAYHRDDAEL 118
>gi|327198766|emb|CCA61467.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 343
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------------GVAKR 54
F FE N ++ + DQ WF AKDV LGY I + KR
Sbjct: 34 FSFEDNTVKMVGTLDQ-PWFRAKDVLKVLGYSEDKTTIKNRVHRQVPDKYKRSLGEIYKR 92
Query: 55 YPLKTE----GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
P + + G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 GPHRGDHPVNGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AME 149
Query: 111 APKLRATSASTVLRV 125
R T+ T LR+
Sbjct: 150 TILNRNTALDTNLRL 164
>gi|260880940|ref|ZP_05403197.2| BRO family domain protein [Mitsuokella multacida DSM 20544]
gi|260849978|gb|EEX69985.1| BRO family domain protein [Mitsuokella multacida DSM 20544]
Length = 312
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
II+E +Y L+ S L SA++F+ WV EVLP++RKTGSYS ++ + ST V +
Sbjct: 225 IINESGMYSLIFGSKLESARRFKHWVTSEVLPSIRKTGSYS-----MKESDDSTSNTVDE 279
Query: 128 HLEELAKQ 135
L+E+ KQ
Sbjct: 280 KLDEIVKQ 287
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC 48
E ++R I D + N WFV KDVA LGY AI H
Sbjct: 101 EFQQLRVIEDANGNPWFVGKDVAEDLGYLKERNAIREHV 139
>gi|253690480|ref|YP_003019670.1| prophage antirepressor [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251757058|gb|ACT15134.1| prophage antirepressor [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 192
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-VAKRYPLKTEGG 62
++ +FE IR IV+ WF+ KD+ L NS+ A+N H K ++ Y + G
Sbjct: 31 VSVIKFEDKTIR-IVNVYGEPWFIVKDICEVLSLSNSHMALNEHEKNTISLTYDNR---G 86
Query: 63 IQKVRIISEPDVYRLL---VKSTLPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+I+E Y+LL K++ P +F WVF EV+P++RKTGSY V L
Sbjct: 87 NPNYDVIAESGFYKLLAFNCKTSPPDTFIHRFSNWVF-EVIPSIRKTGSYGVPFASLNDH 145
Query: 118 SASTVL 123
S L
Sbjct: 146 SRRKAL 151
>gi|281357236|ref|ZP_06243725.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281316267|gb|EFB00292.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 110
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R ++D D + F+ +DV LGY N N +N + LKT+GGIQ VR++++ +
Sbjct: 15 VRMVLD-DDGLRFIIRDVCDILGYNNPNRILNRLGNTRREYAKLKTDGGIQNVRLVTDDE 73
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLP 99
V +LL + + F W F+ + P
Sbjct: 74 VCKLLCNARTRATPAFADWYFDTLSP 99
>gi|292397820|ref|YP_003517886.1| BRO-L [Lymantria xylina MNPV]
gi|291065537|gb|ADD73855.1| BRO-L [Lymantria xylina MNPV]
Length = 345
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 28/130 (21%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TE 60
I F+F ++ +R +++KDQ + FVAKDVA +L YE +A++ H V +Y L E
Sbjct: 6 IGEFKFGEDTFTLRYVLEKDQQVKFVAKDVAVSLRYERPADAVSKH---VDIKYKLTYAE 62
Query: 61 GGIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G Q +I++ V +L++KS LP A + + W+ EEV+
Sbjct: 63 LGRQIADPTLNVKLIVKKGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVI 122
Query: 99 PTLRKTGSYS 108
P + TG Y
Sbjct: 123 PRVLCTGKYD 132
>gi|37651366|ref|NP_932615.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499275|gb|AAQ91674.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 336
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F + +R ++D+D + FVAKDVA++L Y ++AI H V +Y E
Sbjct: 6 IGQFKFGEDVFTLRYVLDRD-IVKFVAKDVASSLKYNICDKAIRTH---VDDKYKTSFEQ 61
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
IQ +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 62 TIQLGGSTSTNLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQV 121
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
TG Y+ P ++ ++K ++ + LL K V K ++++
Sbjct: 122 LCTGKYN---PAIKQQQEENKQLINKLVKTFSDHTNTLQTALLQKTQELVKKQEFIERIV 178
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLN 187
A K + + D L +T++ LN
Sbjct: 179 ATKDKQIEAKD----LQVTRVMTDLN 200
>gi|9631113|ref|NP_047783.1| Ld-bro-l [Lymantria dispar MNPV]
gi|3822381|gb|AAC70332.1| Ld-bro-l [Lymantria dispar MNPV]
Length = 353
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGG-------- 62
++ T+ D++Q W VA A ALGY N A+ H V ++ K++G
Sbjct: 14 EVFTVQDENQEKWMVANPFAEALGYTRLNYAVTQHVSVVNQKTYEEFKSQGSTATDDSSL 73
Query: 63 ----IQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
IQ K + I++ V+ L+ S +P+A++F+ W ++LPTL G YS+ +AP
Sbjct: 74 LPRNIQAKTKFINQAGVFELIGASEMPAAKRFKTWNTNDLLPTLCAEGEYSMSRDAP 130
>gi|327198688|emb|CCA61389.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 320
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 18/133 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYP------LKT 59
F F+ N ++ + DQ WF AKDV LGY + + I H K V +Y +
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSDDIKNIKTHIYKYVPDKYKRALLDIIGC 92
Query: 60 EGGIQKVRI-------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 RGSNQSLTYQEGREIYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AMETI 149
Query: 113 KLRATSASTVLRV 125
R T T LR+
Sbjct: 150 LNRNTVLDTNLRL 162
>gi|209170967|ref|YP_002268113.1| BRO-C [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436558|gb|ACI28785.1| BRO-C [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 4 ITPFEF--ESNKIRTIV-DKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
I F+F E ++R +V D D+ + FV +D+A L YE +AI H K VA+
Sbjct: 6 IGAFKFGEEKFELRYVVNDNDKQVLFVGRDIAIVLKYEKPADAIAKHVDAKYKCVAESMG 65
Query: 57 LKTE----------GGIQKVR------------IISEPDVYRLLVKSTLPSAQKFERWVF 94
L+ + GG ++ +I++ V +L++KS LP A + + W+
Sbjct: 66 LQNKDPSFGENQGVGGEVTIKKGSPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLL 125
Query: 95 EEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
EEV+P + TG Y+ LR++K + + ++ KD QL
Sbjct: 126 EEVIPQVLCTGKYTPAIDNGDDGDEKQALRLYKDFQAVVQK---KDEQL 171
>gi|33331801|gb|AAQ11109.1| BRO-E [Mamestra configurata NPV-A]
Length = 361
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 42/166 (25%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------CKGVAKRYPLKTEG 61
+R +VD ++N+ FVAKD+A L YE+ A+ H C+ + K EG
Sbjct: 18 LRYVVDDNKNVKFVAKDIALMLKYEDPKGAVQKHVDTKYKTPYQPTCQNNIEVGAAKIEG 77
Query: 62 GIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 78 GQNGSLAQNGAAKIVGQNSPLYLHPSTWMITKAGVIQLIMKSKLPHAVELQEWLLEEVIP 137
Query: 100 TLRKTGSYSVEAPKLRA--TSASTVLRVHKHLEELAKQAGLKDNQL 143
+ TG Y+ P + + S +R++K + + ++ KD QL
Sbjct: 138 QVLCTGKYN---PAISSGEDDESYAMRLYKDFQLIVQK---KDEQL 177
>gi|292397782|ref|YP_003517848.1| BRO-H [Lymantria xylina MNPV]
gi|291065499|gb|ADD73817.1| BRO-H [Lymantria xylina MNPV]
Length = 415
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 26/128 (20%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TE 60
I F+F ++ +R ++ +Q + FVAKDVA++L Y N N+A++ H V K+Y +E
Sbjct: 6 IGQFKFGQDTFTLRYVLGDEQPVKFVAKDVASSLKYGNCNDAVSKH---VDKKYKYTYSE 62
Query: 61 GGIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
G Q ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 HGSQIASLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQ 122
Query: 101 LRKTGSYS 108
+ TG Y
Sbjct: 123 VLCTGKYD 130
>gi|20069969|ref|NP_613173.1| BRO-e [Mamestra configurata NPV-A]
gi|20043363|gb|AAM09198.1| BRO-e [Mamestra configurata NPV-A]
Length = 360
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 42/166 (25%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------CKGVAKRYPLKTEG 61
+R +VD ++N+ FVAKD+A L YE+ A+ H C+ + K EG
Sbjct: 18 LRYVVDDNKNVKFVAKDIALMLKYEDPKGAVQKHVDTKYKTPYQPTCQNNIEVGAAKIEG 77
Query: 62 GIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 78 GQNGSLAQNGAAKIVGQNSPLYLHPSTWMITKAGVIQLIMKSKLPHAVELQEWLLEEVIP 137
Query: 100 TLRKTGSYSVEAPKLRA--TSASTVLRVHKHLEELAKQAGLKDNQL 143
+ TG Y+ P + + S +R++K + + ++ KD QL
Sbjct: 138 QVLCTGKYN---PAISSGEDDESYAMRLYKDFQLIVQK---KDEQL 177
>gi|315650036|ref|ZP_07903116.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
gi|315487806|gb|EFU78109.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
Length = 183
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 27 VAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSA 86
+A D+A ALG+ ++N A+ + + T GIQ V I++E +YRL+++S P A
Sbjct: 1 MATDIANALGHRDANNALKKMKTKYKGTHKVSTPSGIQNVTILNEKGIYRLIMRSNKPEA 60
Query: 87 QKFERWVFEEVLPTLRKTGSY 107
++F+ +V+ EV+ LR+ Y
Sbjct: 61 EEFQDFVY-EVIKGLREASGY 80
>gi|90592840|ref|YP_529793.1| BRO-D [Agrotis segetum nucleopolyhedrovirus]
gi|71559290|gb|AAZ38289.1| BRO-D [Agrotis segetum nucleopolyhedrovirus]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 39/156 (25%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP----------- 56
EFE +R +VD D + FV KD+A L Y + +AI+ H V ++Y
Sbjct: 15 EFE---LRYVVDNDMQVLFVGKDIARVLKYNDCKQAIHKH---VNEKYKCVFEKMGGQND 68
Query: 57 ----------LKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
++ E I+K +I++ V +L++KS LP A + + W+ EEV
Sbjct: 69 APPCFDDNEGVRGEVAIKKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLLEEV 128
Query: 98 LPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELA 133
+P + TG Y P + + +TV +H+ + L+
Sbjct: 129 IPQVLCTGKYQ---PAVDNGNGATVSMLHEISQSLS 161
>gi|253999182|ref|YP_003051245.1| prophage antirepressor [Methylovorus sp. SIP3-4]
gi|253985861|gb|ACT50718.1| prophage antirepressor [Methylovorus sp. SIP3-4]
Length = 119
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKR-YPLKTEGGIQKV 66
+++K+RT++ ++ WF A DV L +N+ A+ A + KR Y L G +
Sbjct: 1 MDTHKVRTVL-QEGVPWFHAADVCKVLAIKNATVALKQASLEPEDKRSYSLGLPG--KAP 57
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++E +Y L++ S PS++ F+RWV VLPTLRKTG+Y
Sbjct: 58 MFVNETGLYLLVMNSRKPSSRPFQRWVTGVVLPTLRKTGAY 98
>gi|15320795|ref|NP_203305.1| CUN001 putative bro protein, ATP_GTP_A motif, similar to AcMNPV ORF
2 [Culex nigripalpus NPV]
gi|15278257|gb|AAK94079.1|AF403738_1 CUN001 putative bro protein, ATP_GTP_A motif, similar to AcMNPV ORF
2 [Culex nigripalpus NPV]
Length = 593
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 42/128 (32%)
Query: 24 IWFVAKDVATALGYENSNEA----INAHCK------------------------------ 49
+W VAKDVA +LGYEN ++A ++A K
Sbjct: 159 VWVVAKDVAKSLGYENPSQAHARVVDAFKKNLGDFDFNGVNRMMLRCSMYESAPPTPMQT 218
Query: 50 --------GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
GV + K G + ++ +++E V +L+++S LP+A+++++WV VLP++
Sbjct: 219 DESELSDDGVGEEREAKLPGHLGRLVMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPSI 278
Query: 102 RKTGSYSV 109
R+TG Y V
Sbjct: 279 RRTGRYDV 286
>gi|309807065|ref|ZP_07701045.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166561|gb|EFO68760.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 03V1-b]
Length = 150
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP + G Y + T
Sbjct: 5 TQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAIVHKGVYMTDKKAYDITH 64
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQL 143
+ + L++ A Q KD Q+
Sbjct: 65 DRSGATLADLLQQAADQLKQKDIQI 89
>gi|307694250|ref|ZP_07636487.1| putative antirepressor [Ruminococcaceae bacterium D16]
Length = 269
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 21/105 (20%)
Query: 25 WFVAKDVATALGYENSN---EAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV-- 79
WFV DV G N N + ++A KG + + T GG+Q V I++E +Y +L
Sbjct: 26 WFVVADVCAYFGVANRNRIMQNVDAEDKGGTQ---MDTPGGVQTVAIVNESGLYSVLFAL 82
Query: 80 ---------KSTLPSAQK----FERWVFEEVLPTLRKTGSYSVEA 111
K + QK F+RW+ EV+PT+RKTG Y ++
Sbjct: 83 QPTKARGVSKEHIEERQKKLHDFKRWITHEVIPTIRKTGGYMTDS 127
>gi|167833750|gb|ACA02626.1| BRO-A [Spodoptera frugiperda MNPV]
gi|319997404|gb|ADV91302.1| bro [Spodoptera frugiperda MNPV]
Length = 334
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 54/257 (21%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F E ++R ++ + ++FV KD+AT L YEN+ +AI H V +Y + G
Sbjct: 6 INLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDH---VDDKYKIAF-G 61
Query: 62 GIQKVR-----------------------------IISEPDVYRLLVKSTLPSAQKFERW 92
I+ + +I++ V +L++KS L A + + W
Sbjct: 62 DIKTLMPSVIVNARLLKINNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQEW 121
Query: 93 VFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
+FEEV+P + TG YS P+ T ++ KH + K KD Q V +
Sbjct: 122 MFEEVIPQVLCTGKYS---PQAALTEEKEIV---KHFQVQMKN---KDEQ----VQNLIV 168
Query: 153 KITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQVSKVS 210
+++ V + + I+ L ++ N+ Y + + N Q+ + +NKLL K + VS
Sbjct: 169 QLSKVTEHKNAMIEKLLNNVNNMYTKLQDTVSKTNEIMLQKDKQINKLLDK----LDDVS 224
Query: 211 GGYRPTPKGEERGGKMC 227
P + + +C
Sbjct: 225 ERVVQYPADDTKMPMIC 241
>gi|125860191|ref|YP_001036361.1| BRO [Spodoptera frugiperda MNPV]
gi|120969336|gb|ABM45779.1| BRO [Spodoptera frugiperda MNPV]
Length = 334
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 54/257 (21%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F E ++R ++ + ++FV KD+AT L YEN+ +AI H V +Y + G
Sbjct: 6 INLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDH---VDDKYKIAF-G 61
Query: 62 GIQKVR-----------------------------IISEPDVYRLLVKSTLPSAQKFERW 92
I+ + +I++ V +L++KS L A + + W
Sbjct: 62 DIKTLMPSVIVNARLLKINNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQEW 121
Query: 93 VFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
+FEEV+P + TG YS P+ T ++ KH + K KD Q V +
Sbjct: 122 MFEEVIPQVLCTGKYS---PQAALTEEKEIV---KHFQVQMKN---KDEQ----VQNLIV 168
Query: 153 KITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQVSKVS 210
+++ V + + I+ L ++ N+ Y + + N Q+ + +NKLL K + VS
Sbjct: 169 QLSKVTEHKNAMIEKLLNNVNNMYTKLQDTVSKTNEIMLQKDKQINKLLDK----LDDVS 224
Query: 211 GGYRPTPKGEERGGKMC 227
P + + +C
Sbjct: 225 ERVVQYPADDTKMPMIC 241
>gi|308174803|ref|YP_003921508.1| hypothetical protein BAMF_2912 [Bacillus amyloliquefaciens DSM 7]
gi|307607667|emb|CBI44038.1| Uncharacterized Bro-N domain-containing protein J Ld-bro-j
[Bacillus amyloliquefaciens DSM 7]
gi|328554754|gb|AEB25246.1| hypothetical protein BAMTA208_15445 [Bacillus amyloliquefaciens
TA208]
Length = 249
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK- 65
F FE ++RT+ K +++FVAKDV AL NS A+ + + + K
Sbjct: 8 FNFEGQEVRTVSVKG-DVYFVAKDVCDALEISNSRHALTRLDDDESMSFEMTHPQSPSKT 66
Query: 66 --VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+++++E +Y L+ S +A+ F+RWV +VLP++RK Y
Sbjct: 67 ILMQVVNESGLYELIFSSRKKTAKDFKRWVKRDVLPSIRKNKVY 110
>gi|215401314|ref|YP_002332618.1| BRO-D [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448814|gb|ACH88604.1| BRO-D [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 356
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 40/179 (22%)
Query: 7 FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--------- 55
F+F E ++R +V+ ++N+ FVAKD+A L YE++ A+ H K
Sbjct: 9 FKFGEEEFELRYVVEDNKNVKFVAKDIALMLKYEDTKGAVQKHVDTKYKSTYQPNGQTNF 68
Query: 56 ---PLKTEG---------GIQKVR-------------IISEPDVYRLLVKSTLPSAQKFE 90
K EG G K+ +I++ V +L++KS LP A + +
Sbjct: 69 DVGSAKIEGSQNGSLLKIGAAKIVGRNSPLYLHPATWMITKAGVIQLIMKSKLPYAVELQ 128
Query: 91 RWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
W+ EEV+P + TG YS P + + +R++K + + ++ + QL +++ R
Sbjct: 129 EWLLEEVIPQVLCTGKYS---PAI-TNDENDAVRLYKDFQVIVQKKDEQLQQLTVQIQR 183
>gi|329729085|gb|EGG65496.1| BRO family, N-terminal domain protein [Staphylococcus epidermidis
VCU144]
Length = 213
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAK---RYPLKTEGG 62
F +IR ++KD W VA DVA LG ++N A+ H +G K R K
Sbjct: 6 FNDKEIR-FIEKDDEYWAVAGDVAKVLGLRDANTAVRYLPTHTRGTLKGRTRSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q +I+E +YRL+++S A++F+ W+ + ++ + TG EA ++
Sbjct: 65 FQDYTVINEKGIYRLVMRSNKTEAEEFQDWICDVLVKLRQSTGLKGYEAFRM 116
>gi|301300663|ref|ZP_07206852.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851771|gb|EFK79466.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 328
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
++K ISEPD Y L +K+ A+KF+ WV EVLP++RK G+Y + +A
Sbjct: 59 VEKGDYISEPDFYTLAIKANNSVAEKFQYWVTHEVLPSIRKHGAYMTDE---KADDVINR 115
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
+ L++ A+Q KD Q ++ L+ K+ N +TIT+I
Sbjct: 116 QGLADLLQQAAEQLNAKDKQ--------------IEALQPKADKYDRYLSNKGLITITEI 161
Query: 183 GERLNPPQRARFLNKLLLKRGL 204
+ R LNK L ++G+
Sbjct: 162 AKEYG--MSGRELNKFLHEKGI 181
>gi|9630901|ref|NP_047498.1| BRO-c [Bombyx mori NPV]
gi|3745920|gb|AAC63767.1| BRO-c [Bombyx mori NPV]
Length = 318
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++ +Q + FVAKD+A++L Y N AI H G +Y E
Sbjct: 6 IGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDG---KYKSTFEH 62
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 ADQIQHHAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYS 108
TG Y+
Sbjct: 123 LCTGKYA 129
>gi|169334316|ref|ZP_02861509.1| hypothetical protein ANASTE_00714 [Anaerofustis stercorihominis DSM
17244]
gi|169259033|gb|EDS72999.1| hypothetical protein ANASTE_00714 [Anaerofustis stercorihominis DSM
17244]
Length = 240
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
+ +I+F KDV AL N+ N + L + G ++E +Y ++++
Sbjct: 21 NNDIYFCLKDVCEALSITNTTMVANRLDVDEVTKLDLGGKSG--STNFVNESGLYSVILR 78
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLK 139
S P+AQKF +WV E+LP +RK G+Y + +A S ++++ L+E AK K
Sbjct: 79 SDKPNAQKFRKWVTSEILPNIRKHGAYMTDETLEKALLSPDFLIQLANQLKE-AKALNSK 137
Query: 140 ---DNQLL 144
DNQ++
Sbjct: 138 LAVDNQIM 145
>gi|116326131|ref|YP_803457.1| baculovirus repeated ORF-e [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180869|gb|ABI13846.1| baculovirus repeated ORF-e [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 320
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------CKGVAKR- 54
I F+F ++ +R + + D + FVAKD+A L Y+++ +A+ H C +R
Sbjct: 6 IGQFKFGEDTFTLRYMFNNDNVLKFVAKDIADKLNYQDTKKAVKDHVDDKYKCAFDQERQ 65
Query: 55 -YPLKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
PL +++ +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 FAPLAENSAVKQGDPLYLHPSTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
G Y AP ++ + +E A +K N L + N + +I+
Sbjct: 126 GKY---APAIKMET-----------DETLSTALIKSNADLAQANANIVEIS 162
>gi|114680001|ref|YP_758451.1| bro-j [Leucania separata nuclear polyhedrosis virus]
gi|39598732|gb|AAR28918.1| bro-j [Leucania separata nuclear polyhedrosis virus]
Length = 344
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 3 TITPFEFESNKIR--TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV--------- 51
+T +F +N + +I+D++ +W +A A L Y +N+A+ H
Sbjct: 2 AVTTVQFANNNLEVVSIMDEEGQLWMLANPFARILEYSRANDAVRQHVSEFNHKNFEEIK 61
Query: 52 AKRYPLK--TEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
++R+ + T +Q K + I+ ++ L+ S +P AQ+F+ W+ ++LP L + GSY+
Sbjct: 62 SRRFIVTSMTSSSVQAKSKFINRAGLFELIQASRMPKAQEFKNWINSDLLPKLCQDGSYN 121
Query: 109 V--EAP 112
+ +AP
Sbjct: 122 MATDAP 127
>gi|86355608|ref|YP_473276.1| BRO-d [Hyphantria cunea nucleopolyhedrovirus]
gi|86198213|dbj|BAE72377.1| BRO-d [Hyphantria cunea nucleopolyhedrovirus]
Length = 328
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 30/178 (16%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------- 54
+ F+F ++ +R +VD D I FVAKDVA +L Y N +A+ + K
Sbjct: 6 VNEFKFGEDTFALRYVVDCDHVIRFVAKDVAASLKYVNCKQAVIVNVDDKYKCTFEQRST 65
Query: 55 -YPLKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
Y L ++ ++ ++++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 PYTLASDSVARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL------LLKVNRGVTKITG 156
G Y AP ++ + ++ K L+ + KD ++ L++ N+ V K
Sbjct: 126 GKY---APAVKMDTDE--IQETKKLDAYKRDVAEKDEKIQSLTTALMETNQQVVKFAN 178
>gi|317058118|ref|ZP_07922603.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683794|gb|EFS20629.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 208
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ I F+ E I++K+ +F KDV LG E + + + K GV +
Sbjct: 15 MNEIKMFKNEKFGEIRIIEKEGKPYFNLKDVCVILGLEQVSR-VKSRLKEDGVILNKVID 73
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G Q+ I EP++Y+ + +S +A++F WV EVLPT+RK G Y+ ++
Sbjct: 74 NLGREQQANFIDEPNLYKCIFQSRKENAEEFTDWVTSEVLPTIRKHGIYATDS 126
>gi|15320902|ref|NP_203412.1| CUN108 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
gi|15278364|gb|AAK94186.1|AF403738_108 CUN108 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
Length = 601
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 40/135 (29%)
Query: 13 KIRTIVDKDQN-IWFVAKDVATALGYENSNEAIN-----------------AHCKGVAKR 54
K R+ + + +W V K+VA +LGYE NEA++ H G+ K
Sbjct: 147 KFRSYAEPENGEVWVVGKEVAKSLGYEKPNEALDKVANVFKKPLCELATTSTHRDGLEKT 206
Query: 55 ---YPLKTE-------------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
P++T+ G + ++ +++E V +L+++S LP+A+++++W
Sbjct: 207 PPPIPMQTDESELSDDGVGEEVEVPKLPGHLGRLVMLNEGGVQQLILESRLPNAKRYKQW 266
Query: 93 VFEEVLPTLRKTGSY 107
V VLP++RKTG Y
Sbjct: 267 VCGTVLPSIRKTGRY 281
>gi|22549491|ref|NP_689264.1| BRO-D [Mamestra configurata NPV-B]
gi|22476670|gb|AAM95076.1| BRO-D [Mamestra configurata NPV-B]
Length = 356
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 43/173 (24%)
Query: 7 FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--------------- 49
F+F E ++R +V+ ++N+ FVAKD+A L YE++ A+ H
Sbjct: 9 FKFGEEEFELRYVVEDNKNVKFVAKDIALMLKYEDTKGAVQKHVDTKYKSTYQPNGQTNF 68
Query: 50 --GVAK-----RYPLKTEGGIQKVR------------IISEPDVYRLLVKSTLPSAQKFE 90
G+AK L GG + V +I++ V +L++KS LP A + +
Sbjct: 69 DVGLAKIEGSQNGSLLKVGGAKIVGRNSPLYLHPATWMITKAGVIQLIMKSKLPYAVELQ 128
Query: 91 RWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
W+ EEV+P + TG YS P + + +R++K + + ++ KD QL
Sbjct: 129 EWLLEEVIPQVLCTGKYS---PAI-TNDENDAVRLYKDFQVIVQK---KDEQL 174
>gi|257451545|ref|ZP_05616844.1| putative antirepressor - phage associated protein [Fusobacterium
sp. 3_1_5R]
Length = 194
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ I F+ E I++K+ +F KDV LG E + + + K GV +
Sbjct: 1 MNEIKMFKNEKFGEIRIIEKEGKPYFNLKDVCVILGLEQVSR-VKSRLKEDGVILNKVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G Q+ I EP++Y+ + +S +A++F WV EVLPT+RK G Y+ ++
Sbjct: 60 NLGREQQANFIDEPNLYKCIFQSRKENAEEFTDWVTSEVLPTIRKHGIYATDS 112
>gi|29567169|ref|NP_818731.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467945|dbj|BAC67335.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 337
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 32/206 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----------------- 44
I F+F ++ +R +++++Q + FVAKDVA AL Y + ++ +
Sbjct: 6 IGEFKFGEDTFALRYVLEQNQQVKFVAKDVAAALKYVDCDQTVRKIVDSKYKTTYGQTPR 65
Query: 45 --NAHCKGVAKR-YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
A K VAKR PL + +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 DDGAASKSVAKRGDPLYLQPH---TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
TG Y P ++ V K + A ++ K + K ++++
Sbjct: 123 LCTGKYD---PAIKQREEENKQLVTKLIATFTDHANALQAVVVQKTKELMDKQEFIERIV 179
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLN 187
A+ K L + D L +T++ LN
Sbjct: 180 AVKDKQLEAKD----LQVTRVMTDLN 201
>gi|285002331|ref|YP_003422395.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343591|gb|ACH69406.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 498
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 42/180 (23%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGGIQKVR--------------- 67
WF+A AT L Y SN+A+ H +R L G +R
Sbjct: 25 WFLANPFATILNYARSNKAVATHVSSQNQRLLCDLTKHGADDVIRAHHCGALTSSLHPQT 84
Query: 68 -IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE-APKLRATSASTVLRV 125
I++ ++ L+ S P AQ+F +WV ++LP L TG Y ++ AP + V +V
Sbjct: 85 KFINQAGLFELIQGSKTPKAQEFRQWVSSDLLPKLCNTGVYDMQTAPVEQQQQMMAVHQV 144
Query: 126 --------------HKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
K+ +ELA ++ + KDN++++K N ++ ++++ M+++H
Sbjct: 145 TNNGTNAAWSLEDYQKNYKELATKSKVMLLEKDNEIMVKTNELMS-----NKMQTMELQH 199
>gi|37651365|ref|NP_932710.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499274|gb|AAQ91673.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 339
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-------GGIQ- 64
++ T+ D + W +A A AL Y N+AI C+ V+K E G I
Sbjct: 14 EVFTVADDKRENWMIANPFAEALNYSRPNKAI---CEKVSKENVKTLEELRSHRCGAITS 70
Query: 65 ----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAP 112
+ + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y +V+AP
Sbjct: 71 SLHPQTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNMAVDAP 124
>gi|223039722|ref|ZP_03610007.1| gp36 [Campylobacter rectus RM3267]
gi|222878914|gb|EEF14010.1| gp36 [Campylobacter rectus RM3267]
Length = 257
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCKGVAKRYPL-KTEG 61
F+ ++ +IR V + + F DV L N++ NA G++ YP+ + G
Sbjct: 6 FKNDNFEIRVAVGEAGDPLFCLADVCKILDLTNASVVKNAITSEFDDGLSLTYPIFDSLG 65
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q I+EP +Y +L++S P+A+ F +WV EVLP++RK G Y
Sbjct: 66 REQNATFITEPQLYFVLMRSDKPNARSFRKWVNIEVLPSIRKHGGY 111
>gi|134300461|ref|YP_001113957.1| BRO domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134053161|gb|ABO51132.1| BRO domain protein [Desulfotomaculum reducens MI-1]
Length = 205
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
+ +KIR + + + W VA D+A AL Y + + + + T GG Q+V I
Sbjct: 8 WNGHKIRFVEKEPGDWWAVAADIAKALEYRRIDSMLRKLKPSQKDTHLMSTLGGQQEVSI 67
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
ISE +Y+++ +S A++FE W+F V+ TLR+
Sbjct: 68 ISETGIYKVITRSRKKEAEQFEDWIF-TVIKTLRQA 102
>gi|296169786|ref|ZP_06851401.1| prophage antirepressor protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895580|gb|EFG75279.1| prophage antirepressor protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 263
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 28/181 (15%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRY- 55
MS + F +E + +IRT+ D+ W VA D+ A+ + + AI + K V +R
Sbjct: 1 MSAVELFTYEETAQIRTVT-IDERRWAVAADICAAIDIRDVSAAIAKLDQRDKMVIRRSD 59
Query: 56 -PLKTEG-------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
P +G +Q + ++SE L+++S P A++F R++ EV P +R TGSY
Sbjct: 60 TPGSNQGIWQQISPRVQSIGLVSEDGATDLVLESRKPEARRFRRFLTHEVWPAIRDTGSY 119
Query: 108 SVEAPKL-------RA--TSASTVLRVHKHLEELAKQAG----LKDNQLLLKVNRGVTKI 154
S P L RA SA V + + + EL QA L D + L V T +
Sbjct: 120 ST-VPTLTDDELIHRALEVSARRVAELTERVAELEPQAAVATKLLDAEGDLSVRDAATSL 178
Query: 155 T 155
T
Sbjct: 179 T 179
>gi|292397828|ref|YP_003517894.1| BRO-N [Lymantria xylina MNPV]
gi|291065545|gb|ADD73863.1| BRO-N [Lymantria xylina MNPV]
Length = 341
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--------YPLK 58
F F + R + + FVAKDVA++L Y N +A+ + G K Y L
Sbjct: 34 FRFGEDVFRLRYVLNDPVKFVAKDVASSLKYVNCKQAVIVNVDGKYKSTFEHESTPYTLA 93
Query: 59 TEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-- 107
++G ++ +I++ V +L++KS LP A + + W+ EEV+P + TG Y
Sbjct: 94 SDGAARQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKYQT 153
Query: 108 --SVEAPKLRATSASTV-LRVHKHLEELAKQAGLKDNQLLLK 146
+V A +++ S + + K L +++ L+++Q+ +K
Sbjct: 154 AVAVNASLVQSQSKDEIQIATLKVLNQMSVSLQLRNDQIKIK 195
>gi|326791875|ref|YP_004309696.1| prophage antirepressor [Clostridium lentocellum DSM 5427]
gi|326542639|gb|ADZ84498.1| prophage antirepressor [Clostridium lentocellum DSM 5427]
Length = 249
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR--------IISEPDVY 75
+ F K VA LG +N N+ I+ + + ++ G +R ++E VY
Sbjct: 21 VLFNPKHVAECLGIKNVNDNISRMNENQVIKLK-NSDIGKTDIRKLNNAGENFLTESGVY 79
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH-----KHLE 130
+L+ KS A++F+ WV + VL ++RKTG+YS + TSA LR+H +H +
Sbjct: 80 KLIFKSHKEEAERFQDWVTDVVLTSIRKTGTYSTGQ---KPTSAMEELRMHYRALEEHSQ 136
Query: 131 EL----AKQAGLKDNQLLLKV 147
E+ A+ A LKDN L V
Sbjct: 137 EIQEVKAEVADLKDNMPLFNV 157
>gi|329890516|ref|ZP_08268859.1| BRO family, N-terminal domain protein [Brevundimonas diminuta ATCC
11568]
gi|328845817|gb|EGF95381.1| BRO family, N-terminal domain protein [Brevundimonas diminuta ATCC
11568]
Length = 182
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGY-----ENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
IRT V D WFVA DV L N + + A K R L G + +
Sbjct: 29 IRT-VQIDGEPWFVAVDVCRCLSLGVNNVTNHTDRLEAAEKRHVARSTLNPGKGGSPMIV 87
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+SE +Y+L+++S A F+ W+ EVLP++RKTG Y++
Sbjct: 88 VSESGLYKLIMRSDKQEALVFQHWIASEVLPSIRKTGKYAL 128
>gi|9631120|ref|NP_047790.1| Ld-bro-n [Lymantria dispar MNPV]
gi|3822388|gb|AAC70339.1| Ld-bro-n [Lymantria dispar MNPV]
Length = 338
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 26/129 (20%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R +++KDQ + FVA+DVA +L YE +A++ H K E
Sbjct: 6 IGEFKFGEDTFTLRYVLEKDQQVKFVARDVAVSLRYERPADAVSKHVD--IKYKSTYAEL 63
Query: 62 GIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G Q +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 64 GRQIADPTLNVKLIVKKGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIP 123
Query: 100 TLRKTGSYS 108
+ TG Y
Sbjct: 124 QVLCTGKYD 132
>gi|209978856|ref|YP_002300599.1| BRO B I [Adoxophyes orana nucleopolyhedrovirus]
gi|192758838|gb|ACF05373.1| BRO B I [Adoxophyes orana nucleopolyhedrovirus]
Length = 344
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 25/127 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---------------- 45
I F+F ++ +R +++++Q + FVAKDVA AL Y + ++ +
Sbjct: 6 IGEFKFGDDTFTLRYVLEQNQQVKFVAKDVAAALKYVDCDQTVRKIVDSKYKTTYAQTPR 65
Query: 46 ---AHCKGVAKR-YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
A K VAKR PL + +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 DDGAASKSVAKRGDPLYLQPH---TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYS 108
TG Y
Sbjct: 123 LCTGKYD 129
>gi|212693450|ref|ZP_03301578.1| hypothetical protein BACDOR_02966 [Bacteroides dorei DSM 17855]
gi|212663963|gb|EEB24537.1| hypothetical protein BACDOR_02966 [Bacteroides dorei DSM 17855]
Length = 190
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 36/44 (81%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++ I+E +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y +
Sbjct: 1 MKYINEGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI 44
>gi|90592767|ref|YP_529720.1| BRO-A [Agrotis segetum nucleopolyhedrovirus]
gi|71559217|gb|AAZ38216.1| BRO-A [Agrotis segetum nucleopolyhedrovirus]
Length = 324
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 34/138 (24%)
Query: 4 ITPFEFESNK--IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F +K +R +V D+++ FVAKD+A+ L YE A+ H K Y L+
Sbjct: 6 IGVFKFGEDKFKLRYVVGNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKCYFLEKGP 65
Query: 62 GIQ--------------------------------KVRIISEPDVYRLLVKSTLPSAQKF 89
I+ + +I++ V +L++KS LP A +
Sbjct: 66 RIEDPSFGDNGSVGVEVSIIKKDLIKKGHPLFLYDQTILITKSGVIQLIMKSKLPYAVEL 125
Query: 90 ERWVFEEVLPTLRKTGSY 107
+ W+ EEV+P + TG Y
Sbjct: 126 QEWLLEEVIPQVLCTGKY 143
>gi|74229793|ref|YP_308997.1| orf108 [Trichoplusia ni SNPV]
gi|72259707|gb|AAZ67478.1| orf108 [Trichoplusia ni SNPV]
Length = 490
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH---CKGVA-------KRYPL 57
E +S + ++ D F AKDVA AL + ++++AI + C + +R +
Sbjct: 12 EDKSFDVYIYINDDGEPLFKAKDVAVALDFADTDQAIRKNVDDCDKITWSEIPSPRRDLV 71
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ ++E +Y L++ S P A+ +RWV EVLP++RKTG Y ++ +
Sbjct: 72 VPPNWHPRTLFLNESGLYSLMLASKKPQAKLIKRWVTSEVLPSIRKTGKYELKEQQ---- 127
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+++ V+ K L + A+ L+ L + N + K++ V L +IK + EY
Sbjct: 128 TSTEVVNYDKKLAD-AQIEALQLKLQLSEANATIAKLSTVKDLTISEIKRNYETQMAEY 185
>gi|126417618|gb|ABO13904.1| BRO-c [Bombyx mori NPV]
Length = 325
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 25/127 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++D +Q + FVAKD+A +L Y N +A+ H V +Y E
Sbjct: 6 IGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYVNYEKAVRVH---VDVKYKSLFEN 62
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 ADQIGHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYS 108
TG Y+
Sbjct: 123 LCTGKYA 129
>gi|237643633|ref|YP_002884323.1| BRO-C [Bombyx mandarina nucleopolyhedrovirus]
gi|229358179|gb|ACQ57274.1| BRO-C [Bombyx mandarina nucleopolyhedrovirus]
Length = 325
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 19/124 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGV---AKR 54
I F+F ++ +R ++D +Q + FVAKD+A +L Y N +A+ H K + A +
Sbjct: 6 IGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYVNYEKAVRVHVDVKYKSLFENADQ 65
Query: 55 YPLKTEGGIQK----------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
T + K +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 ISHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 105 GSYS 108
G Y+
Sbjct: 126 GKYA 129
>gi|253682963|ref|ZP_04863750.1| BRO family, N- domain protein [Clostridium phage D-1873]
gi|253560889|gb|EES90351.1| BRO family, N- domain protein [Clostridium phage D-1873]
Length = 281
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCK-----GVAKRYPLK 58
+FE NK+ +++KD + F ALGY +N IN C+ K +K
Sbjct: 12 QFEGNKVE-MIEKDGQVLFELYSTGMALGYVKTN-TINGKTYVQCRKERVSNTIKNAEIK 69
Query: 59 --TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+GG+ + ++E +Y ++++ + F +WV EVLPT+RKTG Y A +
Sbjct: 70 PLVQGGL---KYLNEEMLYDFMLEAKTEKCKSFRKWVTSEVLPTIRKTGGYVANADLMVN 126
Query: 117 TSASTVLRVHKHL 129
T + HK +
Sbjct: 127 TYFGALDDTHKTI 139
>gi|262040213|ref|ZP_06013465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259042450|gb|EEW43469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 200
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK----- 58
I+ +FE +R IV+ WFV DV AL N A+ + L
Sbjct: 31 ISVIKFEGYTVR-IVNVYGEPWFVVSDVCQALEISNPTSAVASLDSDEVMTLTLTEGHSG 89
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSV 109
GG + + +E Y+L+ +S S A +F WVF +V+P++RKTGSY V
Sbjct: 90 KRGGARSWNMAAESGFYKLIARSRKASTPGTFAHRFSNWVFRDVIPSIRKTGSYGV 145
>gi|22126078|ref|NP_669501.1| phage antirepressor [Yersinia pestis KIM 10]
gi|149365948|ref|ZP_01887983.1| putative phage protein [Yersinia pestis CA88-4125]
gi|218929229|ref|YP_002347104.1| hypothetical protein YPO2126 [Yersinia pestis CO92]
gi|229897546|ref|ZP_04512702.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898191|ref|ZP_04513339.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902051|ref|ZP_04517172.1| putative phage protein [Yersinia pestis Nepal516]
gi|21959034|gb|AAM85752.1|AE013823_3 putative phage antirepressor [Yersinia pestis KIM 10]
gi|115347840|emb|CAL20760.1| putative phage protein [Yersinia pestis CO92]
gi|149292361|gb|EDM42435.1| putative phage protein [Yersinia pestis CA88-4125]
gi|229680947|gb|EEO77042.1| putative phage protein [Yersinia pestis Nepal516]
gi|229688757|gb|EEO80825.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693883|gb|EEO83932.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|320015195|gb|ADV98766.1| putative phage protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 364
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTE 60
S I+ F F+++ +R + ++ WFVA D+ L N ++I N A
Sbjct: 44 SAISQFHFDTHAVRVLSIHNEP-WFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 102
Query: 61 GGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G ++ I+SE +Y L+++ T+P + +WV EVLP +RKTGSY ++P+
Sbjct: 103 RGNEEANIVSESGMYTLILRCRDAVKPGTIP--HRVRKWVTAEVLPAIRKTGSY--DSPR 158
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
+AT + ++ +E KQ + + L K N+ IT
Sbjct: 159 -KATKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMIT 199
>gi|325911587|ref|ZP_08173995.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 143-D]
gi|325476573|gb|EGC79731.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 143-D]
Length = 70
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP + G Y +
Sbjct: 5 TQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAIVHKGVYMTD 56
>gi|167466952|ref|ZP_02331656.1| phage antirepressor [Yersinia pestis FV-1]
Length = 363
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTE 60
S I+ F F+++ +R + ++ WFVA D+ L N ++I N A
Sbjct: 43 SAISQFHFDTHAVRVLSIHNEP-WFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 101
Query: 61 GGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G ++ I+SE +Y L+++ T+P + +WV EVLP +RKTGSY ++P+
Sbjct: 102 RGNEEANIVSESGMYTLILRCRDAVKPGTIP--HRVRKWVTAEVLPAIRKTGSY--DSPR 157
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
+AT + ++ +E KQ + + L K N+ IT
Sbjct: 158 -KATKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMIT 198
>gi|108807483|ref|YP_651399.1| hypothetical protein YPA_1487 [Yersinia pestis Antiqua]
gi|108811760|ref|YP_647527.1| hypothetical protein YPN_1597 [Yersinia pestis Nepal516]
gi|145598300|ref|YP_001162376.1| hypothetical protein YPDSF_1003 [Yersinia pestis Pestoides F]
gi|162418488|ref|YP_001606806.1| BRO domain-containing protein [Yersinia pestis Angola]
gi|165927697|ref|ZP_02223529.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939336|ref|ZP_02227884.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009412|ref|ZP_02230310.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210910|ref|ZP_02236945.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401362|ref|ZP_02306859.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420176|ref|ZP_02311929.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426582|ref|ZP_02318335.1| BRO family, N- domain protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|270490772|ref|ZP_06207846.1| BRO family, N-terminal domain protein [Yersinia pestis KIM D27]
gi|294503821|ref|YP_003567883.1| hypothetical protein YPZ3_1711 [Yersinia pestis Z176003]
gi|108775408|gb|ABG17927.1| hypothetical protein YPN_1597 [Yersinia pestis Nepal516]
gi|108779396|gb|ABG13454.1| hypothetical protein YPA_1487 [Yersinia pestis Antiqua]
gi|145209996|gb|ABP39403.1| hypothetical protein YPDSF_1003 [Yersinia pestis Pestoides F]
gi|162351303|gb|ABX85251.1| BRO domain protein [Yersinia pestis Angola]
gi|165912677|gb|EDR31306.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920311|gb|EDR37588.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991967|gb|EDR44268.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208090|gb|EDR52570.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961871|gb|EDR57892.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049058|gb|EDR60466.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054458|gb|EDR64270.1| BRO family, N- domain protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|262362060|gb|ACY58781.1| hypothetical protein YPD4_1873 [Yersinia pestis D106004]
gi|262365803|gb|ACY62360.1| hypothetical protein YPD8_1677 [Yersinia pestis D182038]
gi|270339276|gb|EFA50053.1| BRO family, N-terminal domain protein [Yersinia pestis KIM D27]
gi|294354280|gb|ADE64621.1| hypothetical protein YPZ3_1711 [Yersinia pestis Z176003]
Length = 335
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTE 60
S I+ F F+++ +R + ++ WFVA D+ L N ++I N A
Sbjct: 15 SAISQFHFDTHAVRVLSIHNEP-WFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 73
Query: 61 GGIQKVRIISEPDVYRLLVKS-------TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G ++ I+SE +Y L+++ T+P + +WV EVLP +RKTGSY ++P+
Sbjct: 74 RGNEEANIVSESGMYTLILRCRDAVKPGTIP--HRVRKWVTAEVLPAIRKTGSY--DSPR 129
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
+AT + ++ +E KQ + + L K N+ IT
Sbjct: 130 -KATKKALPGKITIEQQEAVKQLVMNRGKALPKENQAKAMIT 170
>gi|126699913|ref|YP_001088810.1| putative phage-related regulatory protein [Clostridium difficile
630]
gi|115251350|emb|CAJ69182.1| putative phage-related regulatory protein [Clostridium difficile]
Length = 121
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 18/111 (16%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAK-RYPLKTEG 61
I FEFE I F +KDVA L +N NE I + K V K R +
Sbjct: 13 IEVFEFEGR-----------ILFNSKDVANCLDIKNVNENIILMNEKQVVKLRNSDISNT 61
Query: 62 GIQKVR-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+K+ ++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 62 DIRKLNNAGENFLTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAY 112
>gi|157310914|ref|YP_001468910.1| putative antirepressor [Corynebacterium phage P1201]
gi|95832062|gb|ABF57462.1| putative antirepressor [Corynebacterium phage P1201]
Length = 307
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 1 MSTITP---------FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV 51
MST TP F+F+ +++RT+ + WFV DV L + +
Sbjct: 32 MSTATPSPVQNAPQLFDFKGSEVRTMTQNGEP-WFVLADVCKVLEISQPHRVAARLNQAD 90
Query: 52 AKRYPLKT-----EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
R + E + + +SE +Y +++ S P A++F RW+ EV+P++RK G+
Sbjct: 91 VTRSTVTITQVNGESATKSMNYVSESGLYDVILDSRKPEAKEFRRWITSEVIPSIRKHGA 150
Query: 107 Y 107
Y
Sbjct: 151 Y 151
>gi|86355577|ref|YP_473245.1| BRO-c [Hyphantria cunea nucleopolyhedrovirus]
gi|86198182|dbj|BAE72346.1| BRO-c [Hyphantria cunea nucleopolyhedrovirus]
Length = 241
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++++DQ + FVAKDVA +L Y+++ A+ +H V +Y E
Sbjct: 6 IGEFKFGEDTFALRYVLERDQQVKFVAKDVAASLKYQDTKHAVKSH---VDDKYKCTFER 62
Query: 62 GIQKVR------------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G + +I + V +L ++S L +A + + W +E VLP
Sbjct: 63 GCINISKENSVKQGDPLYLSPQTILIDKIGVIQLFMRSKLHNAAELQNWFYERVLP 118
>gi|326407432|gb|ADZ64503.1| anti-repressor protein [Lactococcus lactis subsp. lactis CV56]
Length = 255
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 22 QNIWFVAKDVATALGY---ENSNEAINAHCKG-VAKRYPLKTEGGIQKVRIISEPDVYRL 77
+ + F A+ VA +LG +N + I + +Y + G I+K ISEP VY+L
Sbjct: 21 EEVLFSAEQVAKSLGLTQKQNKSGKIYESIRWETINKYLPQLSGEIEKGSFISEPMVYKL 80
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAG 137
K+ ++KF W+ EVLPT+RK G+Y +A S + L +L QAG
Sbjct: 81 AFKANNAVSEKFTDWLAVEVLPTIRKHGAYMTDAKVQDVISGN-------GLADLLLQAG 133
Query: 138 LKDNQLLLK 146
+ QL L+
Sbjct: 134 NQIKQLELE 142
>gi|114680055|ref|YP_758468.1| baculovirus repeated ORF-d [Plutella xylostella multiple
nucleopolyhedrovirus]
gi|91982119|gb|ABE68387.1| baculovirus repeated ORF-d [Plutella xylostella multiple
nucleopolyhedrovirus]
Length = 340
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 25/127 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL---- 57
I F+F ++ +R ++++DQ + FVAKDVA +L Y + ++A K V +Y +
Sbjct: 6 IGQFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYADCDQAAR---KIVDAKYKITYEQ 62
Query: 58 ------KTEGGIQK----------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
T + K +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 TRHDDGSTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQV 122
Query: 102 RKTGSYS 108
TG Y
Sbjct: 123 LCTGKYD 129
>gi|255102979|ref|ZP_05331956.1| hypothetical protein CdifQCD-6_19373 [Clostridium difficile
QCD-63q42]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 22/131 (16%)
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY---SVEAPKLRATSASTVL 123
+ ++E VY+L+ KS A++F+ W+ +EVLP +R+TG+Y + + KLR AS +
Sbjct: 74 KFLTESGVYKLIFKSKKEEAERFQDWISDEVLPAIRQTGAYITNNADPDKLRE-KASEIE 132
Query: 124 RVH------KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE-- 175
++ L+EL AG DN+ L + + K G+D LP N+E
Sbjct: 133 KLQLAYNSTSMLKELLDGAGF-DNKSKLLTAKTLYKKAGID---------LPIEINEEEH 182
Query: 176 YLTITQIGERL 186
Y QI +L
Sbjct: 183 YFDTKQIASKL 193
>gi|109287897|ref|YP_654591.1| hypothetical protein MIV019R [Invertebrate iridescent virus 3]
gi|123808679|sp|Q197E1|VF201_IIV3 RecName: Full=Putative Bro-N domain-containing protein 019R
gi|106073520|gb|ABF82049.1| hypothetical protein MIV019R [Aedes taeniorhynchus iridescent
virus]
Length = 406
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRY-------------------------PLKT 59
+F KDV + L Y++ +A+ K K+ PL
Sbjct: 35 YFCGKDVCSILRYKDVKQALQNKVKPKNKKMLSVLVKQDHNAVGVQTTSTRLGSNSPLTY 94
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G K I+EP +Y L++ S P A++F+ V+E++LP++RK GSY +E ++ T A
Sbjct: 95 NEG--KAIYINEPGLYALIMHSNAPFAEEFQDLVYEQILPSIRKYGSYQLE---MQLTQA 149
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
L + + + A +A +K + ++V++ + +I
Sbjct: 150 MEQLSIKERDVQEAHEARIKAERKAVRVDKFMRRIA 185
>gi|165969110|ref|YP_001651010.1| baculovirus repeated ORF e [Orgyia leucostigma NPV]
gi|164663606|gb|ABY65826.1| baculovirus repeated ORF e [Orgyia leucostigma NPV]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 3 TITPFEFESNKIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRY---- 55
++ EF NK + +DKD W VA A ALGY N AI + K Y
Sbjct: 2 SVCKIEFVDNKTVEVYTIDKDGVTWMVANPFAEALGYHNCANAIAKFVSRNNQKIYEEIK 61
Query: 56 PLKTE---GGIQKVR-------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
P + E +Q +R I+ V+ L+ S +P+A++F+ W ++LPTL + G
Sbjct: 62 PPRIEEDDSSVQLIRNFKYNTKFINRAGVFELINSSEMPAAKRFKSWNNNDLLPTLCQEG 121
Query: 106 SYSV--EAP 112
Y++ +AP
Sbjct: 122 EYNMVKDAP 130
>gi|212694217|ref|ZP_03302345.1| hypothetical protein BACDOR_03743 [Bacteroides dorei DSM 17855]
gi|224026255|ref|ZP_03644621.1| hypothetical protein BACCOPRO_03011 [Bacteroides coprophilus DSM
18228]
gi|253572710|ref|ZP_04850110.1| prophage antirepressor [Bacteroides sp. 1_1_6]
gi|254882533|ref|ZP_05255243.1| prophage antirepressor [Bacteroides sp. 4_3_47FAA]
gi|317480911|ref|ZP_07939992.1| phage antirepressor protein KilAC domain-containing protein
[Bacteroides sp. 4_1_36]
gi|329965191|ref|ZP_08302122.1| BRO family protein [Bacteroides fluxus YIT 12057]
gi|212663204|gb|EEB23778.1| hypothetical protein BACDOR_03743 [Bacteroides dorei DSM 17855]
gi|224019491|gb|EEF77489.1| hypothetical protein BACCOPRO_03011 [Bacteroides coprophilus DSM
18228]
gi|251837610|gb|EES65701.1| prophage antirepressor [Bacteroides sp. 1_1_6]
gi|254835326|gb|EET15635.1| prophage antirepressor [Bacteroides sp. 4_3_47FAA]
gi|316902996|gb|EFV24869.1| phage antirepressor protein KilAC domain-containing protein
[Bacteroides sp. 4_1_36]
gi|328523554|gb|EGF50651.1| BRO family protein [Bacteroides fluxus YIT 12057]
Length = 276
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV-RIISEPDVYRLLVKSTLP 84
F DVA LG + S + + V +YP+ G ++V I+E +Y +++ S P
Sbjct: 26 FCLADVARVLGLKTS-KLVQRLSDDVLSKYPISDSLGREQVTNFINEDGLYDVILDSRKP 84
Query: 85 SAQKFERWVFEEVLPTLRKTGSY 107
A++F +WV EVLP++RK G+Y
Sbjct: 85 EAKRFRKWVTSEVLPSIRKHGAY 107
>gi|13751087|emb|CAC37063.1| Bro-II protein [Bombyx mori NPV]
Length = 320
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCKGVAK--------RYPLKTEGGIQK---------- 65
+ FVAKD+A++L Y N +AIN H K R P + K
Sbjct: 29 VKFVAKDIASSLKYGNCKDAINRHVDDKYKYTYNEHGARIPHHAPDTVVKQGDPLYLHPH 88
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+I++ V +L++KS LP A + + W+ EEV+P + TG Y+
Sbjct: 89 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKYA 131
>gi|312792906|ref|YP_004025829.1| phage antirepressor protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312878147|ref|ZP_07738078.1| phage antirepressor protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311795071|gb|EFR11469.1| phage antirepressor protein [Caldicellulosiruptor lactoaceticus 6A]
gi|312180046|gb|ADQ40216.1| phage antirepressor protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENS--------NEAINAHCKGVAKRYPLKTEG 61
E K+R IV + I+F +DVA L Y + I CK + +++
Sbjct: 13 EFGKLRVIVKDNGTIFFNLQDVAWGLKYVKKAKERLYLRKDRIANICKSLGITVVVQSGQ 72
Query: 62 GIQ-------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
I+ + I E +Y L +S A+KF +WV +EVLPT+R+TG+Y + KL
Sbjct: 73 PIEIAPDLDFEQLYIPEDGLYELAFESHASGARKFRKWVTQEVLPTIRQTGAYIKDTKKL 132
Query: 115 RATS---ASTVLRVHKH-LEELAKQAGLKD 140
A + A+ +++ H+ ++EL +A D
Sbjct: 133 LALAVLEANKIIQEHEQKIKELQPKAEYYD 162
>gi|113195505|ref|YP_717643.1| BRO-B [Clanis bilineata nucleopolyhedrosis virus]
gi|94959046|gb|ABF47446.1| BRO-B [Clanis bilineata nucleopolyhedrosis virus]
Length = 339
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 25/126 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ ++R +V+++ + FVAKDVA+ L ++N+ +A+ H V ++Y E
Sbjct: 7 IGNFKFGEDTFRLRYVVEREI-VKFVAKDVASNLKHQNTKKAVKDH---VDEKYKSTYEM 62
Query: 62 GIQKVR-------------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
G + V +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 63 GKEVVTSNLEPVNKGDSLYLQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVL 122
Query: 103 KTGSYS 108
TG Y+
Sbjct: 123 CTGKYA 128
>gi|255652574|ref|ZP_05399476.1| putative phage-related regulatory protein [Clostridium difficile
QCD-37x79]
Length = 237
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ ++E VY+L+ KS A+KF+ WV +EVLP++RKTG+Y++ L
Sbjct: 71 KFLTESGVYKLIFKSKKKEAEKFQDWVMDEVLPSIRKTGTYNINQNYL 118
>gi|260911967|ref|ZP_05918531.1| phage antirepressor protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633914|gb|EEX52040.1| phage antirepressor protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 265
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q+ ++E ++Y+++++S P A+ F+ WV EVLPT+RKTG Y AP++
Sbjct: 65 QQAIFVNEQNLYKVIMRSDKPQAEPFQDWVCGEVLPTIRKTGGYIATAPEM 115
>gi|68304191|ref|YP_249659.1| BRO-A [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973020|gb|AAY83986.1| BRO-A [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 517
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-------NAHC----KGVAKRY 55
F E + T+VD D +W +A A L Y N+ +AI N C K R
Sbjct: 50 FGNEDIAVVTMVDDDGQLWMLANPFARILEYSNAPKAISTFVSDKNQLCFENLKSSQSRQ 109
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T K + I++ ++ L+ S +P AQ+F++W+ ++LPTL + YS
Sbjct: 110 TCMTSSLHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLCQQREYS 162
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAI-----NAHCKGVAKRYPLKTEG---------GI 63
+D D W A A AL Y + AI N + K + P++ I
Sbjct: 188 IDVDGEKWMAANPFAKALNYSLPHIAISKFVTNENQKTYEEINPIRFTSTDDSSVLPRNI 247
Query: 64 Q-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
Q K + I++ V+ L+ ST+P+A++F+ W ++LPTL + G YS+ A
Sbjct: 248 QAKTKFINQAGVFELINASTMPAAKRFKAWNTNDLLPTLCQQGEYSMTA 296
>gi|9631081|ref|NP_047751.1| Ld-bro-j [Lymantria dispar MNPV]
gi|81981594|sp|Q9YML3|BROJ_NPVLD RecName: Full=Uncharacterized Bro-N domain-containing protein J;
AltName: Full=Ld-bro-j
gi|3822349|gb|AAC70300.1| Ld-bro-j [Lymantria dispar MNPV]
Length = 403
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 29/129 (22%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++ +Q + FVAKD+A+ L + N EA+ H G +Y E
Sbjct: 6 IGQFKFGQDTFTLRYVLGGEQQVKFVAKDIASNLKHANCAEAVRKHVDG---KYKSTFEH 62
Query: 62 GIQKVR----------------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G ++R ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 G--EIRSHLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIP 120
Query: 100 TLRKTGSYS 108
+ TG Y
Sbjct: 121 QVLCTGKYD 129
>gi|237710505|ref|ZP_04540986.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750278|ref|ZP_06086341.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229455227|gb|EEO60948.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237174|gb|EEZ22624.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 190
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 36/44 (81%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++ I++ +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y +
Sbjct: 1 MKYINKGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI 44
>gi|227499686|ref|ZP_03929789.1| antirepressor [Anaerococcus tetradius ATCC 35098]
gi|227218283|gb|EEI83542.1| antirepressor [Anaerococcus tetradius ATCC 35098]
Length = 259
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
E ++RT + D+ +F DV L N N + GV + + G V +
Sbjct: 11 EFGQVRTSIIDDEP-YFALNDVCRVLEIANPRNVKARLNGDGVHTMDGVDSLGRRTDVTM 69
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTVLRVHK 127
ISE ++Y+L+ +S P A++F WV EVLP++RK G+Y + R T ++ +
Sbjct: 70 ISESNLYKLVFQSRKPEAERFADWVTSEVLPSIRKHGAYMTDGVIERTLTDPDYLIMLAT 129
Query: 128 HLEELAKQAGLKDNQL 143
+L+E + L + Q+
Sbjct: 130 NLKEEKAKRALAEAQI 145
>gi|292397702|ref|YP_003517768.1| BRO-A [Lymantria xylina MNPV]
gi|291065419|gb|ADD73737.1| BRO-A [Lymantria xylina MNPV]
Length = 350
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ-------- 64
++ T+ D+ Q W VA A L Y N +AI H ++ + +G
Sbjct: 14 EVFTVQDEHQEKWMVANPFAECLNYTNKKKAIQQHVSTENQKMFEELKGSHCGTLTSSLH 73
Query: 65 -KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
+ + I+ V+ L+ S +P+A++F++W ++LPTL + G YS+ +AP
Sbjct: 74 PQTKFINRAGVFELINSSEMPAAKRFKQWNANDLLPTLCQEGEYSMSKDAP 124
>gi|126417585|gb|ABO13902.1| BRO-a [Bombyx mori NPV]
Length = 316
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----------KGV 51
I F+F ++ +R I+D +Q + FVAKD+A++L Y N +A+ + G
Sbjct: 6 IGEFKFGEDTFTLRYILDDEQPVRFVAKDIASSLKYVNCKQAVIVNVDDKYKTTYSEHGS 65
Query: 52 AKRYPLKTEGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
P Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 TPYTPAPDSVAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLC 125
Query: 104 TGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
TG Y AP + T+ + ++K L ++ + +++ N VT G+ Q
Sbjct: 126 TGKY---APAVEMNTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGLVQANT 182
Query: 163 M 163
M
Sbjct: 183 M 183
>gi|255101442|ref|ZP_05330419.1| putative phage-related regulatory protein [Clostridium difficile
QCD-63q42]
Length = 121
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAK-RYPLKTEG 61
I FEFE I F +KDV L +N NE I + K V K R +
Sbjct: 13 IEVFEFEGR-----------ILFNSKDVVNCLDIKNVNENIRLMNEKQVVKLRNSDISNT 61
Query: 62 GIQKVR-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+K+ ++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 62 DIRKLNNAGENFLTESGVYKLIFKSRKEEAERFQGWISDEVLPSIRQTGAY 112
>gi|255307315|ref|ZP_05351486.1| putative phage-related regulatory protein [Clostridium difficile
ATCC 43255]
Length = 121
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAK-RYPLKTEG 61
I FEFE I F +KDV L +N NE I + K V K R +
Sbjct: 13 IEVFEFEGR-----------ILFNSKDVVNCLDIKNVNENIRLMNEKQVVKLRNSDISNT 61
Query: 62 GIQKVR-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+K+ ++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 62 DIRKLNNAGENFLTESGVYKLIFKSRKEEAERFQGWISDEVLPSIRQTGAY 112
>gi|148368935|ref|YP_001257065.1| bro-5 [Spodoptera litura granulovirus]
gi|147883448|gb|ABQ52057.1| bro-5 [Spodoptera litura granulovirus]
Length = 256
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAH------CKG--VAKRYPLKTEGGIQ----- 64
V+KD+ + + +++A LGY+ ++AI H CK + KR + I
Sbjct: 22 VEKDKFM-YGGRNIAKFLGYKRPHKAIRDHVKPQWKCKFDEIQKRLQIYNNNSIPANWQP 80
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
ISE VY L+++ L +A F +W+FEEVLP LRK G
Sbjct: 81 NTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPELRKNG 121
>gi|9631452|ref|NP_048265.1| ORF MSV194 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049805|gb|AAC97765.1| ORF MSV194 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 409
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAK-RY-PLKTEGGI--------QKVRIISEPDV 74
+F KD+A L Y+++N+AI H K +Y L GI + ISE +
Sbjct: 23 YFKGKDIAEILEYKDTNDAIKKHVDDDDKSKYEDLINRPGILPSLTYNEKNTIYISESGL 82
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
Y L++ S A+ F++W+ EVLP +RK G Y +
Sbjct: 83 YSLILSSKKSEAKIFKKWITNEVLPNIRKHGEYKI 117
>gi|50121236|ref|YP_050403.1| putative phage-related protein [Pectobacterium atrosepticum
SCRI1043]
gi|49611762|emb|CAG75211.1| putative phage-related protein [Pectobacterium atrosepticum
SCRI1043]
Length = 232
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINA-----HCKGVAKRYPLKTEGGIQ--------KVR 67
D + F A VA A G + + ++N GVA R E + K+
Sbjct: 31 DHELLFKATQVAGAAGIKYPSASVNKIVDFKGFNGVALRVSDLGETSHKMLGHRVSPKMW 90
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ +E VY +L++ + + F +WV EEVLPT+RKTGSY+VE
Sbjct: 91 LFNEAAVYSMLLRGHTTAGEPFRKWVTEEVLPTIRKTGSYNVE 133
>gi|126417636|gb|ABO13905.1| BRO-d [Bombyx mori NPV]
Length = 347
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 21/125 (16%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++D +Q + FVAKD+A +L Y + +A+ H V + + G
Sbjct: 6 IGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYASYEKAVRVHV-DVKYKSLFENAG 64
Query: 62 GI------------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
I +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 65 QIGHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLC 124
Query: 104 TGSYS 108
TG Y
Sbjct: 125 TGKYD 129
>gi|145642457|ref|ZP_01798009.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
R3021]
gi|145272850|gb|EDK12744.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
22.4-21]
Length = 67
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
+ F F+SN +R I D ++ WF A DV LGY N +AI+ HCK K++
Sbjct: 8 SAFTFKSNSVRVITDNNREPWFCANDVCDILGYSNPRDAISKHCKENKKQH 58
>gi|200003978|ref|YP_002221560.1| putative antirepressor [Bacteroides phage B40-8]
gi|198209675|gb|ACH81958.1| putative antirepressor [Bacteroides phage B40-8]
Length = 245
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
T GG+Q + ++E ++Y+ +++S P A+ F+ WV +VLP++RK G+Y + EA + T
Sbjct: 52 TNGGMQNIVYVNEKNLYKAIMRSDKPEAEAFQDWVCGDVLPSIRKHGAYMTPEAIEKTLT 111
Query: 118 SASTVLRVHKHL---EELAKQAGLK 139
S ++++ L +E KQA K
Sbjct: 112 SPDFIIQLATQLKNEQEKRKQAEAK 136
>gi|237643687|ref|YP_002884377.1| BRO-D [Bombyx mandarina nucleopolyhedrovirus]
gi|229358233|gb|ACQ57328.1| BRO-D [Bombyx mandarina nucleopolyhedrovirus]
Length = 348
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 26/128 (20%)
Query: 4 ITPFEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
I F+F ++ +R ++++ +Q + FVAKD+A L ++N+ +AI H V +Y E
Sbjct: 6 IGEFKFGEDTFTLRYVLEQGNQQVKFVAKDIANKLNFKNTKKAIRDH---VDDKYKTAYE 62
Query: 61 GG-----------IQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
G ++K +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 DGELLVTHSPNSIVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQ 122
Query: 101 LRKTGSYS 108
+ TG Y
Sbjct: 123 VLCTGKYD 130
>gi|310826506|ref|YP_003958863.1| prophage antirepressor [Eubacterium limosum KIST612]
gi|308738240|gb|ADO35900.1| prophage antirepressor [Eubacterium limosum KIST612]
Length = 287
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 9 FESN---KIRTIVD--KDQ----NIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
FES ++RT+V +DQ ++FVAKDV A+ Y+N +A+ H + V R +
Sbjct: 19 FESEEFARVRTLVSPGEDQELSPTVYFVAKDVCDAMDYQNHRQAVKRHVEPEDVLSRGVI 78
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G ++ +I+E ++ L++ S A++F +V +LP + G+Y
Sbjct: 79 DKYGRRRRTLVINESGLFALILASRQDKARRFRHYVTSVILPAILHYGAY 128
>gi|254713153|ref|ZP_05174964.1| BRO family protein [Brucella ceti M644/93/1]
gi|254716493|ref|ZP_05178304.1| BRO family protein [Brucella ceti M13/05/1]
gi|261218284|ref|ZP_05932565.1| BRO family protein [Brucella ceti M13/05/1]
gi|261320868|ref|ZP_05960065.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|260923373|gb|EEX89941.1| BRO family protein [Brucella ceti M13/05/1]
gi|261293558|gb|EEX97054.1| BRO domain-containing protein [Brucella ceti M644/93/1]
Length = 140
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 17 IVDKDQNIWFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQK 65
+V +++ WFVA DV + LG ++ +N K + +R P G ++K
Sbjct: 7 VVLLNRDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEK 66
Query: 66 VRI--------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 67 LFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>gi|251780911|ref|ZP_04823831.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243085226|gb|EES51116.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 237
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALG-YENSNEAINAHCK---GVAKR 54
MS I F E+ K +RTI + D +I A+D A G YE I + G K
Sbjct: 1 MSNIQIFNNENLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE 60
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ + + K I E Y L +K+ AQ F++W+ EV+P++RKTGSY + PK+
Sbjct: 61 FGFSQD--VAKDDYIPESLFYMLGMKANNKVAQDFQKWLATEVIPSVRKTGSYQL--PKI 116
Query: 115 RATSASTVLRVHKHLEELAKQA-GLKDNQLLLKVN 148
+ + + + L + LKDN L ++
Sbjct: 117 -SKELQAIFMIDGKQQRLENEVKDLKDNMPLFNID 150
>gi|261214076|ref|ZP_05928357.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
gi|260915683|gb|EEX82544.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
Length = 123
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 15/97 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 28 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 82
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWV 93
V I+SE +Y+L+++ST P A+KF+ WV
Sbjct: 83 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWV 119
>gi|116326173|ref|YP_803499.1| baculovirus repeated ORF [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180911|gb|ABI13888.1| baculovirus repeated ORF [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 358
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 1 MSTITPFEFESNKIRTIV---DKDQNIWFVAKDVATALGYENSNEAINAH--------CK 49
MS++ +FE NKI + D D +W +A A L Y N+ +A+ C+
Sbjct: 19 MSSVIKTQFE-NKILEVTKVEDTDGQLWMLANPFARVLEYANAPKAVTKFVSNNNQKCCE 77
Query: 50 GVAKRYPLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ + + + I+ ++ L+ S +P AQ+F++W+ E++LP L G YS
Sbjct: 78 EIQSAQSGQITSSLHPHSKFINRAGLFELIQSSRMPKAQQFKQWINEDLLPKLCDKGEYS 137
Query: 109 --VEAP 112
V+AP
Sbjct: 138 MAVDAP 143
>gi|326693226|ref|ZP_08230231.1| phage antirepressor (Staphylococcus prophage phiPV83) [Leuconostoc
argentinum KCTC 3773]
Length = 253
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 24 IWFVAKDVATALGYEN--SNEAINAHCKGVAKRYPLKTEGG-IQKVRIISEPDVYRLLVK 80
I F A+ A LG S+ I+ + V K + T G +++ I+EP Y+L +K
Sbjct: 19 ILFDAESAAIGLGISRIASSGNISVRWERVNKYLNVPTSGHELKRGDFITEPQFYKLAIK 78
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAG 137
+ +A+KF+ WV EVLP +RK G+Y + + + R + L +L QAG
Sbjct: 79 ANNETAEKFQDWVTSEVLPAIRKHGTYMTNEK-----AEALINRPNDTLADLLIQAG 130
>gi|222530434|ref|YP_002574316.1| prophage antirepressor [Caldicellulosiruptor bescii DSM 6725]
gi|222457281|gb|ACM61543.1| prophage antirepressor [Caldicellulosiruptor bescii DSM 6725]
Length = 261
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-----------------VA 52
E K+R IV D + F DV +LGY N+ +
Sbjct: 13 EFGKLRVIVKDDGTVLFNLHDVGWSLGYTVKNDRGQLFLRKNKLIDIIQSLEIPVVSLSD 72
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ L T +++ I+E +Y L+++S A+KF +WV +EVLP++RKTG Y+ +
Sbjct: 73 TKVELTTALDFEQL-YITEDGLYDLILESRASGARKFRKWVTQEVLPSIRKTGVYAKDPK 131
Query: 113 KLRATSASTVLRVHKHLEE 131
L A + VL +K ++E
Sbjct: 132 HLLALA---VLEANKIIQE 147
>gi|9630998|ref|NP_047668.1| Ld-bro-a [Lymantria dispar MNPV]
gi|3822266|gb|AAC70217.1| Ld-bro-a [Lymantria dispar MNPV]
Length = 350
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---------VAKRYPLKTEGGI 63
++ T+ D Q W A A L Y N N AI H + R L T
Sbjct: 14 EVFTVQDDKQENWMAANPFAETLKYLNVNRAIRVHVSKHNQKTLDELQSDRNGLITSSLH 73
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
+ + I+ V+ L+ S +P+A++F++W ++LP+L + G YS+ +AP
Sbjct: 74 PQTKFINRAGVFELISASEMPAAKRFKQWNANDLLPSLCREGEYSMSKDAP 124
>gi|302526534|ref|ZP_07278876.1| predicted protein [Streptomyces sp. AA4]
gi|302435429|gb|EFL07245.1| predicted protein [Streptomyces sp. AA4]
Length = 309
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 25/162 (15%)
Query: 20 KDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
+D + VA A A+GY +N+ ++++A KG A+ +T GG Q+V +I E ++
Sbjct: 79 EDGRAYVVAGPFAKAMGYRQTKNALDSLDADEKGFAE---TETPGGRQRVAVIFEDGIWE 135
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTG-------------SYSVEAPKLRATSASTVL 123
L+ +STLPSA+ + V + +L LR+TG SY+ EA +L A +
Sbjct: 136 LIFRSTLPSAKALKSRV-KAILRQLRETGVVDTRAQRFEIPRSYA-EALELAAKQTRELE 193
Query: 124 RVHKHLEELAKQAGLKDNQLLL----KVNRGVTKITGVDQLE 161
+ + EL +A L D L+ ++ R V K+ G+ + E
Sbjct: 194 AAEQRVAELEPKADLADTFLVADGSTRLVREVAKLLGMREGE 235
>gi|310828143|ref|YP_003960500.1| toxin-antitoxin system [Eubacterium limosum KIST612]
gi|308739877|gb|ADO37537.1| toxin-antitoxin system [Eubacterium limosum KIST612]
Length = 307
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+++ FV KD A L Y N++ AI H KR + G QK+ +I+EP +Y L+
Sbjct: 47 RDVGFVGKDAADILEYRNASHAIMRHVAPGDRTKRTGVDGAGRSQKMWVINEPGLYGLIF 106
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
S + A++ +V VLP++++ G+Y
Sbjct: 107 GSKMEDARRLGDFVKRVVLPSIQRYGAY 134
>gi|254693795|ref|ZP_05155623.1| Phage-related DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
Length = 113
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 15/97 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTEGGI 63
F F +K+R ++ K + WFVA DV LG +++ A+ + H +G + K+ G
Sbjct: 18 FNFMDHKVRVVLLKGEP-WFVAADVCRCLGIKHTGSAVVSADVHERG----WLAKSSVGN 72
Query: 64 QKVR-------IISEPDVYRLLVKSTLPSAQKFERWV 93
V I+SE +Y+L+++ST P A+KF+ WV
Sbjct: 73 SHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWV 109
>gi|126652616|ref|ZP_01724780.1| prophage Sa05, BRO domain protein [Bacillus sp. B14905]
gi|126590607|gb|EAZ84724.1| prophage Sa05, BRO domain protein [Bacillus sp. B14905]
Length = 206
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG---GIQKVRIISEPDVYRLLVKS 81
W +AKD+A ALGY +S +A+ H K + T G G K ISE +Y+ + +S
Sbjct: 23 WGIAKDIADALGYVDS-QAMVRHIKSKFLQTVKLTVGKNKGNGKFTAISEQGIYKAITRS 81
Query: 82 TLPSAQKFERWVFEEVLPTLRKTG 105
P A+ FE W+F EV+ TLR++
Sbjct: 82 QRPEAEAFEDWLF-EVVKTLRQSS 104
>gi|17987946|ref|NP_540580.1| antirepressor protein ANT [Brucella melitensis bv. 1 str. 16M]
gi|23501165|ref|NP_697292.1| BRO family protein [Brucella suis 1330]
gi|148560310|ref|YP_001258304.1| BRO family protein [Brucella ovis ATCC 25840]
gi|161618238|ref|YP_001592125.1| hypothetical protein BCAN_A0262 [Brucella canis ATCC 23365]
gi|225626789|ref|ZP_03784828.1| BRO family protein [Brucella ceti str. Cudo]
gi|225851809|ref|YP_002732042.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|254705431|ref|ZP_05167259.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|254707992|ref|ZP_05169820.1| BRO family protein [Brucella pinnipedialis M163/99/10]
gi|254709427|ref|ZP_05171238.1| BRO family protein [Brucella pinnipedialis B2/94]
gi|256030921|ref|ZP_05444535.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|256046072|ref|ZP_05448944.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112784|ref|ZP_05453705.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|256158961|ref|ZP_05456804.1| BRO family protein [Brucella ceti M490/95/1]
gi|256254326|ref|ZP_05459862.1| BRO family protein [Brucella ceti B1/94]
gi|256264674|ref|ZP_05467206.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|256368718|ref|YP_003106224.1| BRO family protein [Brucella microti CCM 4915]
gi|260169822|ref|ZP_05756633.1| BRO family protein [Brucella sp. F5/99]
gi|260563351|ref|ZP_05833837.1| BRO family domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260567114|ref|ZP_05837584.1| BRO family domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261221483|ref|ZP_05935764.1| BRO family protein [Brucella ceti B1/94]
gi|261315487|ref|ZP_05954684.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316945|ref|ZP_05956142.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261756148|ref|ZP_05999857.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|261759367|ref|ZP_06003076.1| BRO family protein [Brucella sp. F5/99]
gi|265987982|ref|ZP_06100539.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|265992486|ref|ZP_06105043.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265994227|ref|ZP_06106784.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|265997444|ref|ZP_06110001.1| BRO family [Brucella ceti M490/95/1]
gi|17983685|gb|AAL52844.1| antirepressor protein ant [Brucella melitensis bv. 1 str. 16M]
gi|23347041|gb|AAN29207.1| BRO family protein [Brucella suis 1330]
gi|148371567|gb|ABQ61546.1| BRO family protein [Brucella ovis ATCC 25840]
gi|161335049|gb|ABX61354.1| Uncharacterized protein HI1418 [Brucella canis ATCC 23365]
gi|225618446|gb|EEH15489.1| BRO family protein [Brucella ceti str. Cudo]
gi|225640174|gb|ACO00088.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|255998876|gb|ACU47275.1| BRO family protein [Brucella microti CCM 4915]
gi|260153367|gb|EEW88459.1| BRO family domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260156632|gb|EEW91712.1| BRO family domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260920067|gb|EEX86720.1| BRO family protein [Brucella ceti B1/94]
gi|261296168|gb|EEX99664.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261304513|gb|EEY08010.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739351|gb|EEY27347.1| BRO family protein [Brucella sp. F5/99]
gi|261745901|gb|EEY33827.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|262551912|gb|EEZ07902.1| BRO family [Brucella ceti M490/95/1]
gi|262765208|gb|EEZ11129.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|263003552|gb|EEZ15845.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263095082|gb|EEZ18751.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660179|gb|EEZ30440.1| BRO family protein [Brucella pinnipedialis M292/94/1]
Length = 140
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 75 LLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>gi|9799895|emb|CAA76843.2| hypothetical protein [Anticarsia gemmatalis nucleopolyhedrovirus]
Length = 261
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 20/124 (16%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC---------KGVA 52
I F+F + +R ++D+D + FVAKD+A +L + N+ EA+ H +G
Sbjct: 6 IGQFKFGEDVFTLRYVLDRD-IVKFVAKDIANSLKHTNAAEAVRNHVDIKYKTTYEQGET 64
Query: 53 KRYPLKTE----GGIQKVR----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+P T G ++ +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 65 VSHPASTSLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCT 124
Query: 105 GSYS 108
G Y+
Sbjct: 125 GKYN 128
>gi|116326076|ref|YP_803401.1| baculovirus repeated ORF-b [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180814|gb|ABI13791.1| baculovirus repeated ORF-b [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 329
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 20/124 (16%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC---------KGVA 52
I F+F + +R ++D+D + FVAKD+A +L + N+ EA+ H +G
Sbjct: 6 IGQFKFGEDVFTLRYVLDRD-IVKFVAKDIANSLKHTNAAEAVRKHVDIKYKTTYEQGET 64
Query: 53 KRYPLKTE----GGIQKVR----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+P T G ++ +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 65 VSHPASTSLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCT 124
Query: 105 GSYS 108
G Y+
Sbjct: 125 GKYN 128
>gi|256060414|ref|ZP_05450587.1| BRO family protein [Brucella neotomae 5K33]
gi|261324400|ref|ZP_05963597.1| BRO family protein [Brucella neotomae 5K33]
gi|261300380|gb|EEY03877.1| BRO family protein [Brucella neotomae 5K33]
Length = 140
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 75 LLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>gi|260889418|ref|ZP_05900681.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
gi|260860829|gb|EEX75329.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
Length = 243
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+RTI+ D +WF KDV L N + ++ L ++ GI +E
Sbjct: 28 VRTIL-VDNEVWFCIKDVCDILELTNPTVVAKRLDEDEVTKFNLGSKFGI--TNFTNESG 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
+Y L+++S A+ F +W+ EV+P +RKTG Y E K T A +L+
Sbjct: 85 LYTLILRSDKKEAKPFRKWITSEVIPAIRKTGKY--EEKKKPLTQAELILQ 133
>gi|312875049|ref|ZP_07735067.1| BRO family protein [Lactobacillus iners LEAF 2053A-b]
gi|311089444|gb|EFQ47870.1| BRO family protein [Lactobacillus iners LEAF 2053A-b]
Length = 93
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP +
Sbjct: 43 TQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAI 85
>gi|254701081|ref|ZP_05162909.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261751613|ref|ZP_05995322.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261741366|gb|EEY29292.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 140
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 75 LLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>gi|302876390|ref|YP_003845023.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579247|gb|ADL53259.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 231
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 26 FVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTEGGIQKVR--------IISEPDVYR 76
F K VA L +N N++I N + K V K ++ GI R ++E VY+
Sbjct: 23 FNTKHVAECLDIKNVNDSIRNFNEKQVIK--LTNSDIGIADFRKLNNAGENFLTESGVYK 80
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
L+ KS A++F+ WV + VLP++RKTGSY+
Sbjct: 81 LIFKSRKEEAERFQDWVTDVVLPSIRKTGSYN 112
>gi|73663253|ref|YP_302034.1| putative prophage antirepressor [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495768|dbj|BAE19089.1| putative prophage antirepressor [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 207
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAKRYPLKTEGGIQK 65
F+ +IR ++KD W +A DVA ALGY ++ ++ K V + + T G QK
Sbjct: 6 FDGKQIR-FIEKDNEYWAIAGDVAKALGYSHTPHMTRLLDVSEKAV---HNVDTLKGKQK 61
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
IISE +Y + S AQ+F++WV ++V+ LR++
Sbjct: 62 AIIISEVGIYEAIWNSRRNEAQEFKKWV-KQVIKELRQS 99
>gi|294851652|ref|ZP_06792325.1| BRO family protein [Brucella sp. NVSL 07-0026]
gi|294820241|gb|EFG37240.1| BRO family protein [Brucella sp. NVSL 07-0026]
Length = 177
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 75 LLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGLY 116
>gi|115298581|ref|YP_762434.1| 40.2 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
gi|21668332|emb|CAC84478.1| AV1-BRO-17 protein [Spodoptera frugiperda ascovirus 1a]
gi|114416848|emb|CAL44679.1| 40.2 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
Length = 363
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 21/127 (16%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----------------- 49
F S ++ T+VD W A A ALGY N N+A+ H
Sbjct: 8 FAGRSLEVFTVVDSTGEKWHQANPFADALGYNNVNKAVRTHVSEENQKNYDCFESAHGGS 67
Query: 50 --GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G+ ++ K + I+ V+ L+ S +P+A++F W ++LPTL G Y
Sbjct: 68 TCGLTDESSVRPPSIQAKTKFINTAGVFELINASEMPAAKRFRTWENNDLLPTLCHEGEY 127
Query: 108 SV--EAP 112
++ +AP
Sbjct: 128 NMAKDAP 134
>gi|9630955|ref|NP_047552.1| BRO-d [Bombyx mori NPV]
gi|3745974|gb|AAC63821.1| BRO-d [Bombyx mori NPV]
Length = 349
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 18/102 (17%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCKGVAK--------RYPLKTEGGIQK---------- 65
+ FVAKD+A++L Y N +A++ H K R P + K
Sbjct: 29 VKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYLQPH 88
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+I++ V +L++KS LP A + + W+ EEV+P + TG Y
Sbjct: 89 TVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCTGKY 130
>gi|15079001|ref|NP_149752.1| 289L [Invertebrate iridescent virus 6]
gi|82012134|sp|Q91FN5|289L_IIV6 RecName: Full=Putative Bro-N domain-containing protein 289L
gi|15042370|gb|AAK82150.1|AF303741_289 289L [Invertebrate iridescent virus 6]
Length = 417
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 21/106 (19%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPL---KTEGGIQ----------------- 64
+F KDV LGY++ +A+ H K PL K GG
Sbjct: 35 YFCGKDVCKVLGYKDIKDALKKHVDREDK-LPLSEIKKVGGTAPPTFLGQTYAYLSHNDG 93
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ ISE +Y L++ S P A+ F R V +LP++RK GSYS+E
Sbjct: 94 RAVYISEGGLYSLIMSSEAPFAKDFRRLVCNVILPSIRKFGSYSIE 139
>gi|116326080|ref|YP_803405.1| baculovirus repeated ORF-c [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180818|gb|ABI13795.1| baculovirus repeated ORF-c [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 343
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKRYPLKTE----- 60
++ T+ D + W VA A AL Y N+AI N + Y + T
Sbjct: 14 EVFTVADDKRENWMVANPFAEALNYSKPNKAILEKVSSCNQKTYEELRSYRIGTTQITST 73
Query: 61 --GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAP 112
+Q K + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y +V+AP
Sbjct: 74 LPKEVQAKTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNMAVDAP 130
>gi|13751089|emb|CAC37064.1| Bro-III protein [Bombyx mori NPV]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 26/128 (20%)
Query: 4 ITPFEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
I F+F ++ +R ++++ +Q + FVAKD+A +L Y + +A+ H G +Y E
Sbjct: 6 IGEFKFGEDTFTLRYVLEQGNQQVKFVAKDIAISLKYASYEKAVRVHVDG---KYKSTFE 62
Query: 61 GGIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
Q + +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 HAGQIGHHAPNSVAKQGDPLYLHPRTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQ 122
Query: 101 LRKTGSYS 108
+ TG Y
Sbjct: 123 VLCTGKYD 130
>gi|281420718|ref|ZP_06251717.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281405491|gb|EFB36171.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
++E Y L++ S LP+A KF+ WV EVLP +RKTG Y P + S +R
Sbjct: 43 FVNESGFYALVLGSKLPTAVKFKNWVTSEVLPQIRKTGGY---IPVKQGESDEETIR--- 96
Query: 128 HLEELAKQAGLKDNQLLLK 146
H EE+ + A LK+ + LLK
Sbjct: 97 HAEEILR-ATLKEKENLLK 114
>gi|71897550|ref|ZP_00679795.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71732453|gb|EAO34506.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 266
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----------GVAKRYPLKTEGGIQK 65
+I+D+D + A+++A ALGY + + + + V K P + +
Sbjct: 16 SIIDRDGTPYLSARELARALGYADERSVLRIYARRADEFTEQMTCVVKLTPQGEQA--RD 73
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVL 123
+RI S + + + + A F RWV + EVLP++RKTG Y+V P L +
Sbjct: 74 IRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGEYTVN-PDLEYDQMRSYS 132
Query: 124 RVHKHLEEL--AKQAGLKDNQLLLK 146
+ K +EEL A + D + LL+
Sbjct: 133 KDRKQMEELNTAHSRWISDVRRLLE 157
>gi|110803255|ref|YP_697476.1| BRO domain-containing protein [Clostridium perfringens SM101]
gi|110683756|gb|ABG87126.1| BRO family, N-terminal domain protein [Clostridium perfringens
SM101]
Length = 191
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + +F +I T++ D I ++AKDVA L Y++ ++AIN K Y ++ E
Sbjct: 1 MNDLFIKKFNDEEIITLI-LDNRICWIAKDVAKILNYDDPSKAINQCIKAEKFEYGIEYE 59
Query: 61 G-------------GIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G+ K+ I E +Y + S LP F +W+ EVL
Sbjct: 60 VLAGDKLKEVKRLIGVTHISYLKQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVL 119
Query: 99 PTLRKTGSYSV 109
P LR G+YS+
Sbjct: 120 PELRAKGTYSI 130
>gi|325297699|ref|YP_004257616.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324317252|gb|ADY35143.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 249
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI------ 63
E +IRT+ D+ WF DV L + + CK KR + G+
Sbjct: 10 EFGEIRTMTDEQGEPWFCLADVCRILEIKRV-----SVCKSRLKRDGVCLAEGVSNTTNQ 64
Query: 64 ------QKVRI--ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
QK+ + I+E ++Y+++++S P A+ F+ WV EVLP +RK G Y
Sbjct: 65 YGATTGQKLMLTFINEQNLYKVIMRSDKPQAEGFQDWVCGEVLPAIRKHGGY 116
>gi|169344304|ref|ZP_02865284.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
gi|169297562|gb|EDS79664.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
Length = 191
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 27/157 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + +F +I T++ D I ++AKDVA L Y++ ++AIN K Y ++ E
Sbjct: 1 MNDLFIKKFNDEEIITLI-LDNRICWIAKDVAKILNYDDPSKAINQCIKTEKFEYGIEYE 59
Query: 61 G-------------GIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G+ K+ I E +Y + S LP F +W+ EVL
Sbjct: 60 VLAGDKLKEVKRLIGVTHISYLKQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVL 119
Query: 99 PTLRKTGSYSV--EAPK--LRATSASTVLRVHKHLEE 131
P LR G+YS+ E+ K L+ S + L + L E
Sbjct: 120 PELRTKGTYSINKESYKDNLKDESENLSLYIQDKLNE 156
>gi|12597545|ref|NP_075129.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483811|gb|AAG53803.1|AF271059_60 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 527
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKT 59
++T +F ++ T VD + W VA A AL Y N N AI H K K+
Sbjct: 2 SLTKIQFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEFKS 61
Query: 60 EG------------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ IQ K + I+ V+ L+ S +P A++F+ W ++LP+L + G
Sbjct: 62 DRVGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGE 121
Query: 107 YSV--EAPKLRATSASTVLRVHKHLEELAKQAGLKD 140
Y + +AP A A + VH + A+ +KD
Sbjct: 122 YKMARDAP---ADIAHGMNAVHVATNDGAEAPWMKD 154
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV---------AKRYPLKTEGGI 63
+I ++ D +W +A A L Y N+AI H + A+R+ +
Sbjct: 196 EIISVKDDAGKLWMLANPFALVLNYGRPNDAIRNHVTDINVRNYEYFKARRFNVDDVTLH 255
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRATSAST 121
+ I+ ++ L+ S +P AQ+F W+ ++LP L G Y + +APK A +
Sbjct: 256 PMSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMAADAPKEIANGMNA 315
Query: 122 VLRVHKHLEELAKQAGLKDNQLLL 145
V + +E ++ +L+L
Sbjct: 316 VHAITNEGKEAPWMEDFREFKLML 339
>gi|285002442|ref|YP_003422506.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343702|gb|ACH69517.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 351
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAIN---AHCKG-----VA 52
+ +F ++ + I KD + +W +A A L Y +N+AI +HC +
Sbjct: 2 AVVKVQFANSDLEVISSKDDSGELWMLANPFARILEYSKANDAIRQHVSHCNSKNYEEIR 61
Query: 53 KRYPLKTE---GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY- 107
R + T +Q K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y
Sbjct: 62 SRQFVATHVTSSSVQAKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYD 121
Query: 108 -SVEAP 112
+V+AP
Sbjct: 122 MAVDAP 127
>gi|292397821|ref|YP_003517887.1| BRO-M [Lymantria xylina MNPV]
gi|291065538|gb|ADD73856.1| BRO-M [Lymantria xylina MNPV]
Length = 474
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---------VAKRYPLKTEGGI 63
++ T+ D+ Q W VA A ALGY+N I+ + R+ + +
Sbjct: 14 EVFTVQDEHQEKWMVANPFAEALGYKNCANVISKFVSAENQKIYEEIKSPRFEETDDSSL 73
Query: 64 ------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
K + I+ V+ L+ S +P+A++F+ W ++LPTL G YS+ +AP
Sbjct: 74 LPRNVQAKTKFINRAGVFELISASEMPAAKRFKTWNTNDLLPTLCAEGEYSMSRDAP 130
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG---------- 62
+I I D+ +W +A A L Y N+ +AI + + K +
Sbjct: 152 EIVKIKDRTGQLWMLANPFARILKYSNAPKAIATYVSENNQLCLEKIQSAQVGQTDDSLL 211
Query: 63 -IQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
IQ K + I+ ++ L+ S +P AQ+F++W+ +LP L + G YS+ +AP
Sbjct: 212 YIQPKSKFINRAGLFELIQASKMPRAQEFKQWIGSNLLPKLCQEGEYSMSKDAP 265
>gi|28057012|gb|AAO28877.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 294
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----------GVAKRYPLKTE 60
S K +I+D+D + A+++A ALGY + + + + V K P +
Sbjct: 99 SGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQ 158
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSV 109
+ +RI S + + + + A F RWV + EVLP++RKTGSY+
Sbjct: 159 A--RDIRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTA 207
>gi|115334661|ref|YP_764507.1| phage associated-antirepressor [Geobacillus phage GBSV1]
gi|84688611|gb|ABC61307.1| phage associated-antirepressor [Geobacillus phage GBSV1]
Length = 186
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 8/50 (16%)
Query: 66 VRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSY 107
+++I E D+YRL++K+ S A++FE+W+FE VLPT+R+TG Y
Sbjct: 1 MKVIPEGDIYRLIIKAADQSKNPEIRQKAEEFEKWIFEVVLPTIRRTGGY 50
>gi|187935575|ref|YP_001886948.1| BRO domain protein [Clostridium botulinum B str. Eklund 17B]
gi|187723728|gb|ACD24949.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 237
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALG-YENSNEAINAHCK---GVAKR 54
MS I F E K +RTI + D +I A+D A G YE I + G K
Sbjct: 1 MSNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE 60
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ + + K I E Y L +K+ AQ F++W+ +V+P++RKTGSY + PK+
Sbjct: 61 FGFSQD--VAKEDYIPESLFYMLGMKANNKVAQDFQKWLATKVIPSVRKTGSYQL--PKI 116
Query: 115 RATSASTVLRVHKHLEELAKQA-GLKDNQLLLKVN 148
+ + + + L + LKDN L ++
Sbjct: 117 -SKELQAIFMIDGKQQRLENEVKDLKDNMPLFNID 150
>gi|77747675|ref|NP_779228.2| hypothetical protein PD1016 [Xylella fastidiosa Temecula1]
gi|182681622|ref|YP_001829782.1| prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|182631732|gb|ACB92508.1| Prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|307580057|gb|ADN64026.1| prophage antirepressor-like protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----------GVAKRYPLKTE 60
S K +I+D+D + A+++A ALGY + + + + V K P +
Sbjct: 11 SGKSLSIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQ 70
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYS 108
+ +RI S + + + + A F RWV + EVLP++RKTGSY+
Sbjct: 71 A--RDIRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYT 118
>gi|298713106|emb|CBJ33466.1| EsV-1-117 [Ectocarpus siliculosus]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
P+ T GG Q ++E VYRLL++S P A+ F++WV V+ T+R+TG Y +
Sbjct: 57 PIDTRGGHQDCTFLTEMGVYRLLMRSDKPIARPFQKWV-AHVIATIRETGKYEL 109
>gi|237643572|ref|YP_002884262.1| BRO-A [Bombyx mandarina nucleopolyhedrovirus]
gi|229358118|gb|ACQ57213.1| BRO-A [Bombyx mandarina nucleopolyhedrovirus]
Length = 330
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 30/184 (16%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP----- 56
I F+F ++ +R ++ ++ + FVAKD+A +L Y N +A+ H V +Y
Sbjct: 6 IGEFKFGEDTFTLRYVLGDEKQVKFVAKDIAISLKYVNCKDAVIKH---VNDKYKYTYGE 62
Query: 57 ----LKTEGGIQKVR------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
L T V+ +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 SGSRLATPAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYALELQAWLLEEVIPQ 122
Query: 101 LRKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y AP + T+ + ++K L ++ + +++ N VT G+ Q
Sbjct: 123 VLCTGKY---APAVEMDTNYGVIEELNKKLVFASESLAEANEKIIHFANALVTANAGLVQ 179
Query: 160 LEAM 163
M
Sbjct: 180 ANTM 183
>gi|15426320|ref|NP_203615.1| bro-a [Helicoverpa armigera NPV]
gi|15384396|gb|AAK96307.1|AF303045_49 bro-a [Helicoverpa armigera NPV]
Length = 357
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKT 59
++T +F ++ T VD + W VA A AL Y N N AI H K K+
Sbjct: 2 SVTKIKFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEFKS 61
Query: 60 EG------------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ IQ K + I+ V+ L+ S +P A++F+ W ++LP+L + G
Sbjct: 62 DRVGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGE 121
Query: 107 YSV--EAP 112
Y + +AP
Sbjct: 122 YKMARDAP 129
>gi|163803150|ref|ZP_02197033.1| Prophage antirepressor [Vibrio sp. AND4]
gi|159173050|gb|EDP57883.1| Prophage antirepressor [Vibrio sp. AND4]
Length = 269
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 60 EGGIQKV-RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E GI++ +SEP VYR+ ++S A+KF+ WV +EV+P++RK G Y
Sbjct: 74 ENGIERTDYFVSEPGVYRVALQSNSSGAKKFQNWVIKEVMPSIRKYGIY 122
>gi|306841810|ref|ZP_07474493.1| BRO family protein [Brucella sp. BO2]
gi|306288091|gb|EFM59485.1| BRO family protein [Brucella sp. BO2]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 25 WFVAKDVATAL-----GYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
WFV D+ L G+ ++ + + K KR L + G + + +++E +Y+L++
Sbjct: 3 WFVGADLVEILYGRTSGFSHALDKVPVAEKSYVKRTTLGMKPG-RGITLLNEAGMYKLVL 61
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
KS P A+ F+ WV VLP +RK G Y
Sbjct: 62 KSRKPEAKAFQDWVTGTVLPAIRKDGLY 89
>gi|9630500|ref|NP_046925.1| gp30 [Enterobacteria phage N15]
gi|3192719|gb|AAC19072.1| gp30 [Enterobacteria phage N15]
Length = 264
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-- 57
M ++ F F ES+ IR ++ + WFVA D+ AL N ++A+ L
Sbjct: 1 MKALSVFSFQESHPIRVVL-VGGDPWFVALDICAALNIANPSDALRKLDHDEKLTLGLTE 59
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVE 110
K + ++V ++SE +Y ++++ +A +F +WV EVLP +RK G Y+
Sbjct: 60 AQKLDRMAREVNVVSESGLYTIILRCRDAVKQGTTAWRFRKWVTNEVLPAIRKNGEYAFV 119
Query: 111 APK 113
P+
Sbjct: 120 EPE 122
>gi|225575267|ref|ZP_03783877.1| hypothetical protein RUMHYD_03356 [Blautia hydrogenotrophica DSM
10507]
gi|225037560|gb|EEG47806.1| hypothetical protein RUMHYD_03356 [Blautia hydrogenotrophica DSM
10507]
Length = 107
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--RYPLKTEGGIQKVR 67
E K+RTI+ D WFV KDVATALGY+++++A+ H + K RY G +++
Sbjct: 12 EFGKVRTII-IDGESWFVGKDVATALGYKDTSDALKRHVQYDDKLTRY-FTDSGQSREMY 69
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+++E +Y L+ S ++++ F E
Sbjct: 70 VVNESGLYALIFGSNFVKIPEYQQLKFFE 98
>gi|258623706|ref|ZP_05718684.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258584010|gb|EEW08781.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 254
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----GVAKRY------------PL 57
IRT+ D++ I F DV L +N N + K G+ + PL
Sbjct: 19 IRTL-DRNGKILFCFPDVVKVLAKDNQNYSNKVGEKIGFAGLLSKLSSVLKPKHQVIIPL 77
Query: 58 K--TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
E G + ++E +Y+LL P A++F+ WVFEEVLP++RK Y PK
Sbjct: 78 SGTNEFGAEFDYFVTEAGLYKLLTFDDSPGAERFQDWVFEEVLPSIRKYKMYP--PPKEG 135
Query: 116 ATSASTVLRVHKH 128
A+ ST++ + K
Sbjct: 136 ASEMSTMVALLKQ 148
>gi|116326075|ref|YP_803400.1| baculovirus repeated ORF-a [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180813|gb|ABI13790.1| baculovirus repeated ORF-a [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 243
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 24/121 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++DKD + FVAKD+A++LGYE + A+ K V +Y K+
Sbjct: 6 IGQFKFGEDTFTLRYVLDKDI-VKFVAKDIASSLGYEKFSNAVK---KYVDIKY--KSTY 59
Query: 62 GIQKVR----------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
G Q + ++S V +L+ +S +P+A +F+ W ++ VLP +
Sbjct: 60 GDQSFKNNVKRGDLLYLQPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHVLPACLRNR 119
Query: 106 S 106
S
Sbjct: 120 S 120
>gi|13095813|ref|NP_076703.1| anti-repressor [Lactococcus phage bIL309]
gi|15672425|ref|NP_266599.1| prophage pi1 protein 08 [Lactococcus lactis subsp. lactis Il1403]
gi|12723321|gb|AAK04541.1|AE006281_7 prophage pi1 protein 08 [Lactococcus lactis subsp. lactis Il1403]
gi|12831002|gb|AAK08356.1|AF323670_8 anti-repressor [Lactococcus phage bIL309]
Length = 251
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 22 QNIWFVAKDVATALG---YENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLL 78
+NI F A+ A A+G +N E + + V P E G K ISEP VY+L
Sbjct: 21 ENILFSAEQAAKAMGITQVKNGKEYV--KWERVNSYLPNSPEVG--KGSFISEPMVYKLA 76
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
K+ ++KF W+ EVLPT+RK G+Y ++
Sbjct: 77 FKANNAVSEKFTDWLAVEVLPTIRKHGAYMTDS 109
>gi|219855058|ref|YP_002472180.1| hypothetical protein CKR_1715 [Clostridium kluyveri NBRC 12016]
gi|219568782|dbj|BAH06766.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 282
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS------ 120
+ ++E VY++ KS P A+KF WV +EVLP++R+TG+Y E A +
Sbjct: 79 KFLTESGVYKIAFKSEKPEAEKFTDWVTDEVLPSIRQTGAYISEKANTEALKENNQPEKL 138
Query: 121 -TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
T+ + + + L AG+ DN + L V + + GVD
Sbjct: 139 ETINKSVELVSPLLDVAGV-DNTIKLLVVKTLFSKAGVD 176
>gi|329935729|ref|ZP_08285534.1| DNA-binding protein [Streptomyces griseoaurantiacus M045]
gi|329304820|gb|EGG48693.1| DNA-binding protein [Streptomyces griseoaurantiacus M045]
Length = 318
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAK 53
I+ F + + +IR + D + WF A DV LG+ NS +A+ H + V
Sbjct: 19 ISDFVYAATGARIRRLTMPDGSHWFPAVDVCKRLGHSNSRQALADHVPDAHRDSLETVTG 78
Query: 54 RYPLKTEGGIQKVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Y L G + R +I + RL+ T P+ + F++W EV+ T+++ GSYS+E
Sbjct: 79 AYGLDIPAGREWRRDLNLIDLQGLVRLVNACTKPACEPFKQWAA-EVIETVQREGSYSLE 137
>gi|71897549|ref|ZP_00679794.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71732452|gb|EAO34505.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 138
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
QK+ ++EP +Y L +S P A F++W+ EVLP++RKTGSY
Sbjct: 2 QKLLCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGSY 45
>gi|113195449|ref|YP_717586.1| BRO-A [Clanis bilineata nucleopolyhedrosis virus]
gi|94958990|gb|ABF47391.1| BRO-A [Clanis bilineata nucleopolyhedrosis virus]
Length = 449
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+ EP VY L+ +S P A++ ++V+E +LPT+RKTG Y V A+S+S V+ K
Sbjct: 32 FVLEPGVYALMARSNKPVAKQRMKFVYETILPTIRKTGKYDVSKT---ASSSSEVVNYDK 88
Query: 128 HL 129
L
Sbjct: 89 QL 90
>gi|29567118|ref|NP_818680.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467894|dbj|BAC67284.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 333
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAINAHCKGV---------AKRYPLKTEGGIQKVRII 69
DK +N W VA A L Y N+AI H A R T + + I
Sbjct: 21 DKQEN-WMVANPFAETLKYAKPNKAILQHVSQENQKTLEELRANRCGTITSSLHPQTKFI 79
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--VEAPKL 114
+ V+ L+ S +P+A++F++W ++LPTL G YS V+AP++
Sbjct: 80 NTAGVFELINASEMPAAKQFKQWNTNDLLPTLCHEGQYSMTVDAPEV 126
>gi|9631128|ref|NP_047798.1| Ld-bro-p [Lymantria dispar MNPV]
gi|3822396|gb|AAC70347.1| Ld-bro-p [Lymantria dispar MNPV]
Length = 337
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 33/140 (23%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F F + R + + FVAKDVA +L Y+++ AI H V +Y E G ++
Sbjct: 32 FRFGEDVFRLRYVLNDPVKFVAKDVAGSLKYQDAKRAIRIH---VDDKYKSTFEHG--EI 86
Query: 67 R----------------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
R +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 87 RSHLASNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCT 146
Query: 105 GSYSVEAPKLRATSASTVLR 124
G Y AP A + ++LR
Sbjct: 147 GKY---AP---AIAEESILR 160
>gi|215401299|ref|YP_002332603.1| BRO-B [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448799|gb|ACH88589.1| BRO-B [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 335
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F E K+ ++ D + +W +A A L Y N+ +AI+ + ++Y
Sbjct: 8 FGNEELKVVSVRDSNDQLWLLANPFARILQYANAPKAISTYVGNNNQKYFEELQSSQAGQ 67
Query: 56 PLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
T +Q K + I+ ++ L+ S +P AQ+F WV ++L L TG Y + +AP
Sbjct: 68 TYVTSSYVQTKSKFINRAGLFELIQGSKMPKAQEFRNWVNSDLLVKLSDTGEYRMQTDAP 127
Query: 113 KLRATSASTVLR-VHK 127
T+AS + VHK
Sbjct: 128 ----TAASEAMNVVHK 139
>gi|292397783|ref|YP_003517849.1| BRO-I [Lymantria xylina MNPV]
gi|291065500|gb|ADD73818.1| BRO-I [Lymantria xylina MNPV]
Length = 345
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---------------AHCKGVAKRYPL 57
++ T+ D Q W A A L Y N+AI +HC G
Sbjct: 14 EVFTVQDDKQENWMAANPFAEVLKYSRPNKAIQQHVSAKNQKTLEEMRSHCSGAL----- 68
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
T + + I+ V+ L+ S +P+A++F++W +LPTL + G YS+ +AP
Sbjct: 69 -TSSLHPQTKFINTAGVFELIDASEMPAAKRFKQWNANNLLPTLCQEGEYSMSKDAP 124
>gi|113461558|ref|YP_719627.1| prophage antirepressor [Haemophilus somnus 129PT]
gi|112823601|gb|ABI25690.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 221
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPL----- 57
+T F++ + ++++++ IWF A D+ ALGY N + + N + + + P
Sbjct: 1 MTTLTFQNTSL-SVINQNNQIWFSALDIGKALGYSNGDIGVKNIYNRHQDEFTPCMTTLI 59
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+T GGIQKVRI S + + + S A+ F +WV +
Sbjct: 60 DTQTNGGIQKVRIFSLRGTHLIGMLSHTKVAKAFRKWVLD 99
>gi|96979823|ref|YP_611028.1| bro-b [Antheraea pernyi nucleopolyhedrovirus]
gi|33589244|dbj|BAC81743.1| bro [Antheraea pernyi nucleopolyhedrovirus]
gi|94983356|gb|ABF50296.1| bro-b [Antheraea pernyi nucleopolyhedrovirus]
gi|146229722|gb|ABQ12287.1| baculovirus repeated ORF [Antheraea pernyi nucleopolyhedrovirus]
Length = 339
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-------GGIQ- 64
++ T+ D + W VA A L Y N+AI H V+K+ E G I
Sbjct: 14 EVFTVQDVGRENWMVANPFAETLKYSKPNKAIVQH---VSKQNQKTLEELRSNRCGTIAS 70
Query: 65 ----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--VEAP 112
+ + I+ V+ L+ S +P+A+KF++W ++LPTL + G YS V+AP
Sbjct: 71 SLHPQTKFINTAGVFELINASGMPAAKKFKQWNTNDLLPTLCQEGEYSMVVDAP 124
>gi|168187173|ref|ZP_02621808.1| BRO family, N- domain protein [Clostridium botulinum C str. Eklund]
gi|169294927|gb|EDS77060.1| BRO family, N- domain protein [Clostridium botulinum C str. Eklund]
Length = 247
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 33/170 (19%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-------TE 60
+FE NK+ +++KD + F ALGY + KG K YP K T
Sbjct: 10 QFEGNKVE-MIEKDGQVLFELYSTGMALGYVKA-------AKG--KLYPQKDRIEKVLTN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA---- 111
I V + ++E +Y ++++ + F +WV EVLPT+RKTG Y E
Sbjct: 60 AEISTVVQGVQQYLTENMLYDFMLEARTEKCKSFRKWVTNEVLPTIRKTGGYVNEGKEEE 119
Query: 112 ------PKL-RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
P L T + V + K ++EL +A D + K N+ + ++
Sbjct: 120 FIDNYFPTLSEDTKKAMVKDLQKSVKELKPKADGYDRMINAKNNQTMNQV 169
>gi|148368874|ref|YP_001257004.1| bro-2 [Spodoptera litura granulovirus]
gi|147883387|gb|ABQ51996.1| bro-2 [Spodoptera litura granulovirus]
Length = 368
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++S LP+A++F+RW+FEEVLP LRK+G Y +
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKYDM 31
>gi|209978807|ref|YP_002300550.1| BRO A II [Adoxophyes orana nucleopolyhedrovirus]
gi|192758789|gb|ACF05324.1| BRO A II [Adoxophyes orana nucleopolyhedrovirus]
Length = 333
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAINAHCKGV---------AKRYPLKTEGGIQKVRII 69
DK +N W VA A L Y N+AI H A R T + + I
Sbjct: 21 DKQEN-WMVANPFAETLKYAKPNKAILQHVSQENQKTLEELRANRCGTITSSLHPQTKFI 79
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS--VEAPKL 114
+ V+ L+ S +P+A++F+ W ++LPTL G YS V+AP++
Sbjct: 80 NTAGVFELINASEMPAAKQFKHWNTNDLLPTLCHEGEYSMTVDAPEV 126
>gi|71908121|ref|YP_285708.1| BRO family protein [Dechloromonas aromatica RCB]
gi|71847742|gb|AAZ47238.1| BRO family protein [Dechloromonas aromatica RCB]
Length = 58
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ V +++E +Y+++++S AQKF+ WV +EVLP++RKTGS+
Sbjct: 7 VSTVSLLAESGLYKMVLRSRTQQAQKFQDWVTKEVLPSIRKTGSF 51
>gi|68304205|ref|YP_249673.1| BRO-B [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973034|gb|AAY84000.1| BRO-B [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 635
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAI---------------NA 46
+++ +F ++ T VD D W A A AL Y N+AI N+
Sbjct: 139 SLSKVQFGDKEVETYTVDVDGEKWMAANPFAEALKYSKPNKAILEKVSTENQKIYEEINS 198
Query: 47 HCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ G + + I+ V+ L+ ST+P+A++F+ W ++LPTL + G
Sbjct: 199 YRIGTGDDSSVLPRNIKSNTKFINRAGVFELINASTMPAAKRFKAWNTNDLLPTLCQQGE 258
Query: 107 YSVEA 111
YS+ A
Sbjct: 259 YSMTA 263
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE--- 60
+T F E+ ++ +VD+ W +A A L Y N A NA K V+ + L E
Sbjct: 7 MTSFGNENLEVVCVVDESGERWMLANPFAKILEYSN---APNAIAKYVSDKNQLCIEDCR 63
Query: 61 ----GGIQ-----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G I K + I++ ++ L+ S +P AQ+F++W+ ++LP L G Y ++
Sbjct: 64 SSHIGQITSSLHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLCDKGRYDMQV 123
Query: 112 PKLRATSA 119
L A
Sbjct: 124 DVLANNCA 131
>gi|183983915|ref|YP_001852206.1| phage antirepressor protein [Mycobacterium marinum M]
gi|183177241|gb|ACC42351.1| phage antirepressor protein [Mycobacterium marinum M]
Length = 340
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN-----------------SNEAIN 45
I F ++ +IRTIV D W VA D+ L N +EA+N
Sbjct: 51 AIEVFAYKHTRIRTIV-VDGRRWAVAADICGFLELSNPSMALKRIDDADKRILHRSEALN 109
Query: 46 AHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ +G + + K + V ++SE L++ S P A++F R++ V P++R TG
Sbjct: 110 S-IEGFWESFAAK----VHSVGLVSEDGATDLVLDSRKPDARRFRRFLTHTVWPSIRDTG 164
Query: 106 SYSVEAPKL 114
SY+ AP L
Sbjct: 165 SYTT-APAL 172
>gi|71902151|ref|ZP_00684175.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728085|gb|EAO30288.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 197
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL----KTEGGI 63
S K +I+D+D A+D+A ALGY + + N H + + L T G
Sbjct: 11 SGKSLSIIDRDGVPHLSARDLAHALGYADERSVLRIYNRHSEEFTYQMTLVVNLTTVTGD 70
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAP 112
+ R+ + + + + + A F RWV + E +P++RKTGSYS P
Sbjct: 71 KPTRLFNPRGCHMVSMFARTSVAAAFRRWVLDVLEFMPSIRKTGSYSASHP 121
>gi|257459288|ref|ZP_05624402.1| phage antirepressor protein [Campylobacter gracilis RM3268]
gi|257443301|gb|EEV18430.1| phage antirepressor protein [Campylobacter gracilis RM3268]
Length = 293
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 25 WFVAKDVATALGYENSNEAIN-------AHCKGVAK-RYPL-----KTEGGIQKVRIISE 71
+FVA D+++ LGY N+ + + K + K R P + +G ++SE
Sbjct: 47 YFVANDISSLLGYANTYAMLERLDDDEKTNLKDLLKSRMPEISDLPRIDGVRYDAVLLSE 106
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+Y ++ S P A++F RWV EVLP +RK G Y
Sbjct: 107 SGLYNAILWSEKPQAKEFRRWVTGEVLPAIRKHGGY 142
>gi|110799301|ref|YP_695379.1| BRO domain-containing protein [Clostridium perfringens ATCC 13124]
gi|110673948|gb|ABG82935.1| BRO domain protein [Clostridium perfringens ATCC 13124]
Length = 243
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 1 MSTITPFEFE--SNKIRTIVDKDQNIWFVAKDVATALGY-ENSN-----------EAINA 46
M+ + F+ E S +RTI ++D +I A+D A LG+ +N N E IN
Sbjct: 1 MNNLMIFKNEDLSIDVRTIKNEDGSISINAEDTARGLGFIQNQNKNGKLYISIRWETINN 60
Query: 47 HCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+CK +P K + K I E Y L +K+ A+KF+ W+ +V+P +RK G
Sbjct: 61 YCKEF--NFPNK----LGKDDFIPESLFYLLAMKANNEVARKFQTWLAVDVIPQIRKNGQ 114
Query: 107 Y------SVEAPKLRATS----ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
Y ++E +L+ + V+ V K ++L + L KVNR V + G
Sbjct: 115 YQMKPTSNLELLELQVKALREVEERVIEVDKKFDDLP-LFEIDSKDLKKKVNRVVVSLLG 173
>gi|163842543|ref|YP_001626947.1| hypothetical protein BSUIS_A0282 [Brucella suis ATCC 23445]
gi|163673266|gb|ABY37377.1| Uncharacterized protein HI1418 [Brucella suis ATCC 23445]
Length = 140
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+ +++S P A+KF+ WV + VLP +RK G Y
Sbjct: 75 LLSVSESGLYKPIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 116
>gi|228474634|ref|ZP_04059365.1| BRO domain protein [Staphylococcus hominis SK119]
gi|228271297|gb|EEK12665.1| BRO domain protein [Staphylococcus hominis SK119]
Length = 213
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGVAKRYPL---KTEGG 62
F +IR ++KD W +A D+AT L + +S A H +G K K
Sbjct: 6 FNGTEIR-FIEKDGEHWAIASDIATVLDFRDSFNATKNLPNHVRGTLKGSTTSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Q +I+E +YRL+++S A+ F+ W+ + ++ + TG EA ++
Sbjct: 65 YQDYTVINEKGIYRLIMRSNKKEAEDFQDWICDVLVELRQATGLKDYEAFRM 116
>gi|325152622|gb|ADY88157.1| BRO-A [Helicoverpa armigera SNPV]
Length = 137
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKRYP 56
++T +F ++ T VD D W VA A AL Y +N+AI K + P
Sbjct: 2 SVTKIKFGDKEVETYTVDFDGEKWMVANPFAEALNYSRANKAIFDKVSVKNQKSFEQINP 61
Query: 57 LKTEGGIQKV---------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++ G V + I+ V+ L+ S +P A++F+ W ++LP+L + G Y
Sbjct: 62 HRSSAGESSVIPRNMKPNTKFINRAGVFELINASDMPGAKRFQVWNNNDLLPSLCQEGEY 121
Query: 108 SV--EAP 112
+ +AP
Sbjct: 122 KMARDAP 128
>gi|261881064|ref|ZP_06007491.1| bro family toxin-antitoxin system [Prevotella bergensis DSM 17361]
gi|270332182|gb|EFA42968.1| bro family toxin-antitoxin system [Prevotella bergensis DSM 17361]
Length = 123
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV-RIISEPDVYRLLVKSTLP 84
F DV +L + S I GV R+P+ G Q+V +SE +Y +++ S P
Sbjct: 27 FCLADVCKSLELQAS-AVIRQLDDGVITRHPISDSLGRQQVANFVSEDGLYDVILDSRKP 85
Query: 85 SAQKFERWVFEEVLPTLRKTGSYSV 109
A+ F +W+ EV+ ++KTG YS+
Sbjct: 86 EAKVFHKWITSEVIAPIKKTGGYSL 110
>gi|308172436|ref|YP_003919141.1| phage antirepressor [Bacillus amyloliquefaciens DSM 7]
gi|307605300|emb|CBI41671.1| phage antirepressor [Staphylococcus prophage phiPV83] [Bacillus
amyloliquefaciens DSM 7]
Length = 256
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ + F+ E ++ ++ DQ I F A+ VA LG ++ N + Y
Sbjct: 1 MNNLQTFKNEIFEVAAKIENDQ-ILFDAEQVARNLGLTTVAKSGNVTIRWSRVNTYLPDN 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++K I EP VY+L +++ A++F+ W+ EV+PT+RKTG Y
Sbjct: 60 FPEVEKGDFIPEPLVYKLAFRASNQIAEQFQDWLAFEVIPTIRKTGGY 107
>gi|328910536|gb|AEB62132.1| phage antirepressor [Bacillus amyloliquefaciens LL3]
Length = 256
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKT 59
M+ + F+ E ++ ++ DQ I F A+ VA LG ++ N + Y
Sbjct: 1 MNNLQTFKNEIFEVAAKIENDQ-ILFDAEQVARNLGLTTVAKSGNVTIRWSRVNTYLPDN 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++K I EP VY+L +++ A++F+ W+ EV+PT+RKTG Y
Sbjct: 60 FPEVEKGDFIPEPLVYKLAFRASNQIAEQFQDWLAFEVIPTIRKTGGY 107
>gi|304437552|ref|ZP_07397508.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369474|gb|EFM23143.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 256
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSN--------EAINAHCKGVAKRYPLKTEGGIQK 65
+ V KD + W A+DVA G+ + E +N + KG + K
Sbjct: 26 VSGYVAKDGSAWLNAEDVARGWGFTQTKNGTEYVRWETVNGYLKGFG------FSQLVGK 79
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+ E VYRL K+ AQ F+ + +EVLP +RKTG Y+V+ +
Sbjct: 80 DDFLPENMVYRLGFKANNDVAQAFQAKLADEVLPAIRKTGGYNVKHDDALQS-------- 131
Query: 126 HKHLEELAKQAGLKDNQLLLKV 147
K +E + + A + LLLK+
Sbjct: 132 -KRVEIMERNARTRAANLLLKI 152
>gi|134287312|ref|YP_001111008.1| Bro21 [Heliothis virescens ascovirus 3e]
gi|133722220|gb|ABO37342.1| Bro21 [Heliothis virescens ascovirus 3e]
Length = 364
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKT 59
++T +F ++ T VD + W VA A AL Y N N AI H K K+
Sbjct: 2 SLTKVQFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEFKS 61
Query: 60 EG------------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ IQ K + I+ V+ L+ S +P A++F+ W ++LP L + G
Sbjct: 62 DRHGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPGLCQEGE 121
Query: 107 YSV--EAP 112
Y + +AP
Sbjct: 122 YKMARDAP 129
>gi|164519249|ref|YP_001649036.1| BRO-A [Helicoverpa armigera granulovirus]
gi|163869435|gb|ABY47745.1| BRO-A [Helicoverpa armigera granulovirus]
Length = 516
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+ EP VY L+ +S P A++ ++V+E +LPT+RKTG Y V+ L++TS + V+ K
Sbjct: 120 FVLEPGVYALMARSNKPVAKQRMKFVYETILPTIRKTGKYEVKT--LQSTS-TEVVNYDK 176
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTK 153
L E A ++ +L L++++ V K
Sbjct: 177 KLAE----AHMEAMKLKLELSQTVAK 198
>gi|148750866|ref|YP_001285910.1| hypothetical protein [Lactobacillus phage LL-H]
gi|1395130|gb|AAB06224.1| hypothetical protein [Lactobacillus phage LL-H]
Length = 291
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
I+K I+EP Y+L K++ A+KF+ WV EVLP++RK G+Y+
Sbjct: 67 IKKGDWITEPQFYKLAFKASNDVAEKFQDWVASEVLPSIRKHGAYA 112
>gi|327197615|ref|YP_004301306.1| gp30 [Brochothrix phage NF5]
gi|296245438|gb|ADH03052.1| gp30 [Brochothrix phage NF5]
Length = 257
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 23 NIWFVAKDVATALGY---ENSNEAINAHC-KGVAKRYPLKTEGGIQKVRIISEPDVYRLL 78
N F A+ VA +LG+ ++ E + G K+Y L E + K ISE VY+L
Sbjct: 21 NALFDAETVARSLGFVEIKHGKEYVRWRTINGYLKKY-LSQE--VAKNDFISESMVYKLA 77
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K+ A+KF+ W+ EVLP++RK G+Y
Sbjct: 78 FKANNSLAEKFQDWLASEVLPSIRKHGAY 106
>gi|77747557|ref|NP_298934.2| hypothetical protein XF1645 [Xylella fastidiosa 9a5c]
Length = 210
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTE--------GGIQ 64
TI+D D + A D+A ALGY++++ + + H L G +
Sbjct: 17 TIIDHDGIPYLTAADLARALGYKDASAVLRIYSRHTDEFTSEMSLTVNLTVKGFGCGNSE 76
Query: 65 K-VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYS 108
K VR+ S + + + + A F RWV + EVLP++RKTGSYS
Sbjct: 77 KPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYS 123
>gi|18138388|ref|NP_542684.1| BRO-B [Helicoverpa zea SNPV]
gi|18028770|gb|AAL56206.1|AF334030_131 ORF61 [Helicoverpa zea SNPV]
Length = 352
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+T +F ++++ I KD N +W +A A L Y N+ +AI+ + + + + L++
Sbjct: 2 AVTTVQFANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVE-INNQKILESI 60
Query: 61 GGIQ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--S 108
Q K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y +
Sbjct: 61 QSAQLGQITSSLHPKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMA 120
Query: 109 VEAP 112
+AP
Sbjct: 121 TDAP 124
>gi|28198900|ref|NP_779214.1| hypothetical protein PD1002 [Xylella fastidiosa Temecula1]
gi|182681603|ref|YP_001829763.1| prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|28056998|gb|AAO28863.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631713|gb|ACB92489.1| Prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|307580037|gb|ADN64006.1| prophage antirepressor-like protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 210
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAKRYPLKT-------- 59
S + +I+D+D + A D+A ALGY + + N H + L
Sbjct: 11 SGQSLSIIDRDGTPYLTAADLARALGYADERAVSRIYNRHSEEFTVEMSLVVNLTTKGFG 70
Query: 60 EGGIQK-VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYS 108
G +K VRI S + + + + A F RWV + EVLP++RKTGSY+
Sbjct: 71 SGNSEKPVRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYT 122
>gi|301063311|ref|ZP_07203856.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
gi|300442608|gb|EFK06828.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
Length = 191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 9 FESNKIRTIV--DKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKRYPLKT 59
FE IR I D+ W +++ TAL + +AI + + +P++T
Sbjct: 11 FEDVGIRIIQVEGDDRTFWLSGEEIGTALELTDPKKAIFKIFERHKDELEEFSMLWPIET 70
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
GG Q VRI SE Y + S P A++F +WV
Sbjct: 71 AGGTQDVRIFSEEGTYLITFFSQSPKAKEFRKWV 104
>gi|9106702|gb|AAF84454.1|AE003991_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 315
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLKTE--------GGIQ 64
TI+D D + A D+A ALGY++++ + + H L G +
Sbjct: 122 TIIDHDGIPYLTAADLARALGYKDASAVLRIYSRHTDEFTSEMSLTVNLTVKGFGCGNSE 181
Query: 65 K-VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSV 109
K VR+ S + + + + A F RWV + EVLP++RKTGSYS
Sbjct: 182 KPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSA 229
>gi|189024240|ref|YP_001935008.1| BRO family, N-terminal [Brucella abortus S19]
gi|189019812|gb|ACD72534.1| BRO family, N-terminal [Brucella abortus S19]
Length = 115
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y
Sbjct: 15 IVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLY 54
>gi|307822262|ref|ZP_07652494.1| prophage antirepressor [Methylobacter tundripaludum SV96]
gi|307736828|gb|EFO07673.1| prophage antirepressor [Methylobacter tundripaludum SV96]
Length = 129
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
L T G Q I+E +Y L+ +S P A+ F WV E VLP +RKTG + K R+
Sbjct: 5 LITIKGEQDAYFINEAGLYHLIFRSNKPKAKDFANWVCETVLPEIRKTGFFGTIGIKNRS 64
Query: 117 TSASTV 122
+ + +
Sbjct: 65 SISRQI 70
>gi|284431238|gb|ADB84398.1| Bro [Apocheima cinerarium nucleopolyhedrovirus]
Length = 377
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEA---------------INAHCKGVAKRYPL 57
++ + D+ + W VA A AL Y N+A IN + G +
Sbjct: 40 EVFAVQDEKRENWMVANPFAEALKYSKPNKAVLEKVSAQNQKTLEEINPYRSGTTDESSI 99
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K + I++ V+ L+ S +P+A++F+ W ++LPTL + G YS+
Sbjct: 100 LPRNIQAKTKFINQAGVFELINASNMPNAKRFKAWNNNDLLPTLCQEGEYSM 151
>gi|169342601|ref|ZP_02863653.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
gi|169299373|gb|EDS81440.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
Length = 259
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYE-----NSNEAIN---AHCKGVAKRYPLKTEGGIQK 65
+RTI + D +I A+D A LG+ N E N A G K E K
Sbjct: 16 VRTIKNDDGSISINAEDGAIGLGWTRKQTINGKEYFNVLWARMNGFIKELGFAHECA--K 73
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I E Y L +K+ A+KF+ W+ EV+P +RK+G Y +E
Sbjct: 74 DDFIPESLFYLLAMKANNEVARKFQTWLAVEVIPAIRKSGQYQLE 118
>gi|209170952|ref|YP_002268098.1| BRO-B [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436543|gb|ACI28770.1| BRO-B [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 331
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 17/154 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKRYPLK- 58
F E+ +I ++ D++ +W +A A L Y N+ +AI N C + L
Sbjct: 8 FANENVEIVSVRDENDQLWLLANPFARILEYSNAPKAISTYVTEKNQKCLEQMQSAQLGK 67
Query: 59 ---TEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
T IQ K + I++ ++ L+ S +P AQ+F WV ++L L G YS+ +AP
Sbjct: 68 TILTSSSIQAKSKFINKAGLFELIQASRMPKAQEFRNWVNSDLLVKLCDGGEYSMRTDAP 127
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLK 146
A+ A + +HK + +KD +LK
Sbjct: 128 ---ASVAEGMNVLHKATNNGDEAPWMKDMDGILK 158
>gi|285002387|ref|YP_003422451.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343647|gb|ACH69462.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 358
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------------PLKTE 60
++ +I+D + +W +A A L Y N+ +AI+ + ++Y T
Sbjct: 30 EVISIMDYEGQVWMLANPFARILEYSNAPKAISHYVNSNNQKYFEDIKSAQIGQTSKMTS 89
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAP 112
IQ K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y + +AP
Sbjct: 90 HTIQAKSKFINRAGLFELIQSSRMPKAQEFRNWINSDLLPKLCDDGKYDMVTDAP 144
>gi|71900481|ref|ZP_00682611.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71729721|gb|EAO31822.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 197
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYP----LKTEGGI 63
S K +I+D+D A+D+A ALGY + + N H + + L T G
Sbjct: 11 SGKSLSIIDRDGVPHLSARDLAHALGYADERSVLRIYNRHSEEFTYQMTLVVNLTTVTGD 70
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAP 112
+ R+ + + + + + A F RWV + E +P++RKTG YS P
Sbjct: 71 KPTRLFNPRGCHMVSMFARTSVAAAFRRWVLDVLEFMPSIRKTGGYSASHP 121
>gi|322689224|ref|YP_004208958.1| phage protein [Bifidobacterium longum subsp. infantis 157F]
gi|320460560|dbj|BAJ71180.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis
157F]
Length = 255
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
FE ++ + FVA +A L YE++ + + ++ + T GG Q++
Sbjct: 8 LRFEDTEVTALDCNTDEPVFVASPIAKKLAYESAKDMLRNLDSDEKGKHIVPTLGGEQEM 67
Query: 67 RIISEPDVYRLLVKSTLPSAQK----------FERWVFEEVLPTLRKTGSYSVEAPK 113
+I+ P + L + P A K F+RWV E++PT+ +TG Y V+ P+
Sbjct: 68 SVITLPGLIHAL-NNRRPGAVKDEATRNMVIRFQRWVNHELVPTVMRTGRYEVQRPQ 123
>gi|212693449|ref|ZP_03301577.1| hypothetical protein BACDOR_02965 [Bacteroides dorei DSM 17855]
gi|237710504|ref|ZP_04540985.1| phage associated-antirepressor [Bacteroides sp. 9_1_42FAA]
gi|265750277|ref|ZP_06086340.1| antirepressor [Bacteroides sp. 3_1_33FAA]
gi|212663962|gb|EEB24536.1| hypothetical protein BACDOR_02965 [Bacteroides dorei DSM 17855]
gi|229455226|gb|EEO60947.1| phage associated-antirepressor [Bacteroides sp. 9_1_42FAA]
gi|263237173|gb|EEZ22623.1| antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 67
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
N+IRTI ++D +WF A DVA LGY N +AI +CK GV R PL+
Sbjct: 14 NQIRTI-EEDGKLWFCATDVARVLGYVNPRDAIIRYCKSMGVVIRAPLQ 61
>gi|325912804|ref|ZP_08175183.1| BRO family, N-terminal domain protein [Lactobacillus iners UPII
60-B]
gi|325477935|gb|EGC81068.1| BRO family, N-terminal domain protein [Lactobacillus iners UPII
60-B]
Length = 135
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTE 60
S I F FE N+I+ + + +F +DV L +++ A +GV L T
Sbjct: 6 SGIQTFYFEHNRIQMMA-IGSDPYFNLEDVCEILKIKDTKRAKARLDEQGVCDAMTL-TS 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G QK ISE ++YRL+ KS KF WV EVLP
Sbjct: 64 SGFQKKDFISETNLYRLIFKSRRLENIKFAVWVMSEVLPVF 104
>gi|311977357|ref|YP_003986476.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
gi|81999811|sp|Q5UP77|YL002_MIMIV RecName: Full=Uncharacterized Bro-N domain-containing protein L2
gi|55416627|gb|AAV50277.1| Bro family N terminal domain containing protein [Acanthamoeba
polyphaga mimivirus]
gi|308204266|gb|ADO18067.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
Length = 246
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 7 FEFESNKIRTI-VDKDQ---NIWFVAKDVATALGYENSNEAINAHCKG--------VAKR 54
F+FE + + VDK ++W +VA LGY + +AI+ H + +
Sbjct: 100 FQFEGKRFTSFFVDKRDGKWDVWIYGAEVARFLGYNDDKKAISIHVESCNRLIFEEIRNN 159
Query: 55 YPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+P+++ +K + I+ L+ S P A K ++W+ +EV+P L G YS++
Sbjct: 160 FPIESNSIPKTLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIPALIMDGVYSMQ 219
Query: 111 APKLRA 116
+L+
Sbjct: 220 PKELKV 225
>gi|9630839|ref|NP_047436.1| BRO-a [Bombyx mori NPV]
gi|3745858|gb|AAC63705.1| BRO-a [Bombyx mori NPV]
Length = 317
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 4 ITPFEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-T 59
I F+F ++ +R ++++ + + FVAKD+A++L Y N +A+ V K+Y +
Sbjct: 6 IGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAV---IVNVDKKYKTTYS 62
Query: 60 EGG-------------------IQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
E G +Q +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 63 ESGSIPYTPAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 122
Query: 100 TLRKTGSYSVEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
+ TG Y AP ++ T+ + ++K L ++ + +++ N VT G+
Sbjct: 123 QVLCTGKY---APAVKMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGLV 179
Query: 159 QLEAM 163
Q M
Sbjct: 180 QANTM 184
>gi|254780555|ref|YP_003064968.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040232|gb|ACT57028.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 41
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY 37
MS + PF E N IR +VD+D N WF+ KDVA L +
Sbjct: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDF 37
>gi|330999690|ref|ZP_08323399.1| BRO family protein [Parasutterella excrementihominis YIT 11859]
gi|329574196|gb|EGG55772.1| BRO family protein [Parasutterella excrementihominis YIT 11859]
Length = 279
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+T F FE IR D + + FVA DV AL +N +A+ + + +G
Sbjct: 6 LTNFTFEDCSIRVFGDFIKPL-FVAADVCKALSIQNVTQALQSLAPFERSMLNIGRQGN- 63
Query: 64 QKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVE 110
+++E +Y L+++ A +F WV EVLP +RK G Y+V+
Sbjct: 64 --ANVVTESGLYTLILRCRDAVKEGTFAYRFRVWVTNEVLPAIRKQGFYAVQ 113
>gi|28211228|ref|NP_782172.1| hypothetical protein CTC01560 [Clostridium tetani E88]
gi|28203668|gb|AAO36109.1| phage-related protein [Clostridium tetani E88]
Length = 254
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 22/112 (19%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK--TEGGIQK 65
EFE K+ I++ +N+ F ALGY N + K YP K + I+
Sbjct: 11 EFEGQKVEIIIE--ENVLFELYSTGMALGYIKKN--------NIGKIYPQKDRIDKIIKN 60
Query: 66 VRI----------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I ++E +Y +++S +KF +WV EVLP +R+ G Y
Sbjct: 61 AEITPCVHGVHTYLTEDMLYDFMLESRTEKCKKFRKWVTNEVLPQIRQNGMY 112
>gi|71276418|ref|ZP_00652694.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71901023|ref|ZP_00683134.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71162734|gb|EAO12460.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729209|gb|EAO31329.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 280
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAKRYPLKT--------EGGIQ 64
TI+D D + A D+A ALGY + + N H + L G +
Sbjct: 86 TIIDHDGIPYLTAADLARALGYADERAVSRIYNRHSEEFTVEMSLVVNLTTKGFGSGNSE 145
Query: 65 K-VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSAST 121
K R+ S + + + + A F RWV + EVLP++RKTGSYS + +
Sbjct: 146 KPTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALCA 205
Query: 122 VLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + H ++L + + + K Q L + G T+I+G
Sbjct: 206 IWFLCDHFKKLHEMSRVNKVPQALYWL--GATEISG 239
>gi|13751084|emb|CAC37061.1| Bro-I protein [Bombyx mori NPV]
Length = 241
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------CK 49
I F+F ++ +R ++D +Q + FVAKD+A++L Y N +A+ + C
Sbjct: 6 IGEFKFGEDTFTLRYVLDAEQQVKFVAKDIASSLKYVNCKQAVIVNVDNKYKTTYEQACI 65
Query: 50 GVAKRYPLKTEGGI---QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
++K +K + + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 66 NISKENRVKQGDPLYLQSQTILLDKIGVIQLFMRSKMTNAAELQNWFYEHVLP 118
>gi|299472848|emb|CBN80417.1| EsV-1-117 [Ectocarpus siliculosus]
Length = 513
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 1 MSTITPFEFESNK----IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M + F F++ + I+ + DK F A + +G + ++ +
Sbjct: 1 MDVLKTFVFDNTEHVVDIQVVDDKPM---FKADQIGKIIGLKQMRSSVRHFDRDEKVVQR 57
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ T GG Q ++E YRLL++S P A+ F++WV V+ T+R+TG Y +
Sbjct: 58 MHTRGGEQDCTFLTEMGAYRLLMRSDKPMARPFQKWV-AHVIATIRETGKYEL 109
>gi|295394273|ref|ZP_06804503.1| phage antirepressor protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294972857|gb|EFG48702.1| phage antirepressor protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 74
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 1 MSTITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ + F E IRTI Q + F +DVA ALGY++ A+ HCKGVA +P
Sbjct: 1 MTALQAFTNHEFGTIRTITSGGQ-VLFCGRDVANALGYQDPANAVKLHCKGVANYHP 56
>gi|209401115|ref|YP_002273984.1| baculovirus repeated ORF c [Helicoverpa armigera NPV NNg1]
gi|209364367|dbj|BAG74626.1| baculovirus repeated ORF c [Helicoverpa armigera NPV NNg1]
Length = 352
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ +F ++++ I KD N +W +A A L Y N+N A+ H K +
Sbjct: 2 AVIKVQFANSELEVISIKDDNGELWMLANPFARILEYSNANRAVRVHVLE-------KNQ 54
Query: 61 GGIQKVR----------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
++K+R I+ ++ L+ S +P A++F W+ ++LP L
Sbjct: 55 CILEKIRPDHCGLDDVTLHPLSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDD 114
Query: 105 GSY--SVEAP 112
G Y + +AP
Sbjct: 115 GKYDMATDAP 124
>gi|71899742|ref|ZP_00681893.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71730437|gb|EAO32517.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 213
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK---------GVAKRYPLKTEG 61
S K +I+D+D A D+A ALGY++++ + + + + + +K G
Sbjct: 11 SGKSLSIIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTSEMSLTVKLTVKGFG 70
Query: 62 ---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSY 107
+ VR+ S + + + + A F RWV + EVLP++RKTGSY
Sbjct: 71 CGNSEKPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSY 121
>gi|86136646|ref|ZP_01055225.1| antirepressor protein ant [Roseobacter sp. MED193]
gi|85827520|gb|EAQ47716.1| antirepressor protein ant [Roseobacter sp. MED193]
Length = 152
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYE---NSNEAINAHCKGVAK--------RYPLKT-EGGIQ 64
++D D WFVA DV AL + + A + +A P+ T E
Sbjct: 1 MIDIDGEPWFVATDVCRALSLQIQPTGKVNVTAATRNLAGDERGLLSIHTPIPTKESHTT 60
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K+ +SE +Y+L+++ F+ WV VLP +RK G Y
Sbjct: 61 KMVCLSEGGLYKLIMRCDKAEVHDFQEWVTRVVLPAIRKDGGY 103
>gi|229100208|ref|ZP_04231108.1| Phage antirepressor protein [Bacillus cereus Rock3-29]
gi|228683250|gb|EEL37228.1| Phage antirepressor protein [Bacillus cereus Rock3-29]
Length = 260
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ISE D+Y L+ ++ A++F +WV EVLP++RK G+Y
Sbjct: 71 KYISESDLYELIFEAETQKAKEFRKWVTSEVLPSIRKHGAY 111
>gi|282920047|ref|ZP_06327775.1| phage antirepressor protein [Staphylococcus aureus subsp. aureus
C427]
gi|282316218|gb|EFB46598.1| phage antirepressor protein [Staphylococcus aureus subsp. aureus
C427]
Length = 213
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR- 67
F + +IR ++K+ W +A DVA LG+ +++ A+ + V ++T +K R
Sbjct: 6 FNNKEIR-FIEKNGEYWAIATDVAKVLGFRDAHTAVRVLPEHVRDTLKVRTTSDKKKSRK 64
Query: 68 -----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
+I+E +YRL+++S A F+ W+ +VL LR ST
Sbjct: 65 FQDYTVINEKGIYRLIMRSNKTEALDFQDWIC-DVLVELR----------------TSTK 107
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
L+ ++ L K+ K N+ + + G+ I+ D +A I + S+
Sbjct: 108 LKEYEVFHMLDKE---KQNEAMNNLKNGIEAISKKDYCKAQTISNKAVSN 154
>gi|165969059|ref|YP_001650959.1| baculovirus repeated ORF c [Orgyia leucostigma NPV]
gi|164663555|gb|ABY65775.1| baculovirus repeated ORF c [Orgyia leucostigma NPV]
Length = 343
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------------PLKTEGGI 63
++ D D +W +A A L Y N+ +AI ++Y + T +
Sbjct: 17 SVRDNDGQVWMLANPFARVLEYSNAPKAITTFVDHDNQKYFEEIKSSQVGQTCVVTSSCV 76
Query: 64 Q-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAP 112
Q K + I+ ++ L+ S +P A++F W+ ++LP L G Y +V+AP
Sbjct: 77 QAKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDEGRYDMAVDAP 128
>gi|15837306|ref|NP_297994.1| hypothetical protein XF0704 [Xylella fastidiosa 9a5c]
gi|9105588|gb|AAF83514.1|AE003913_10 phage-related protein [Xylella fastidiosa 9a5c]
Length = 210
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT---------- 59
S K +I+D+D A D+A ALGY++++ + + + + Y +
Sbjct: 11 SGKSLSIIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTYQMSLVVNLTVKGFG 70
Query: 60 EGGIQK-VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYS 108
G +K VR+ S + + + + A F RWV + EVLP++RKTGSY+
Sbjct: 71 SGNSEKPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYT 122
>gi|20336383|gb|AAM18341.1| baculovirus repeat open reading frame b [Helicoverpa armigera NPV]
Length = 345
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQ--NIWFVAKDVATALGYENSNEAINAHCKGV--------- 51
+ F ++ I KD +W +A A L Y N+AI H +
Sbjct: 2 AVVKVHFNDRELEIISVKDDAGKLWMLANPFALVLNYGRPNDAIRNHVTDINVRNYEYFK 61
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SV 109
A+R+ + + I+ ++ L+ S +P AQ+F W+ ++LP L G Y +
Sbjct: 62 ARRFNVDDVTLHPISKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMAT 121
Query: 110 EAP 112
+AP
Sbjct: 122 DAP 124
>gi|294630404|ref|ZP_06708964.1| DNA-binding protein [Streptomyces sp. e14]
gi|292833737|gb|EFF92086.1| DNA-binding protein [Streptomyces sp. e14]
Length = 325
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAK 53
I+ F + + ++R + D N WF A DV LG+ N +A++ H + +
Sbjct: 19 ISDFVYAATGARVRRLTMPDGNHWFPAVDVCKRLGHTNPQKALSDHVPEGHRETLETLTG 78
Query: 54 RYPLKTEGGIQKVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Y L G + R +IS + L+ T P+ F++WV EV+ T+++ GSY +E
Sbjct: 79 GYGLSIPAGREWRRDLNVISLQGLVLLVNACTKPACAPFKQWV-AEVIETVQREGSYCLE 137
>gi|78357846|ref|YP_389295.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220251|gb|ABB39600.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 105
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 24 IWFVAKDVATALGYENSN------EAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
IWFVAKDV AL + SN + + C P++ ++ V II+E +Y L
Sbjct: 32 IWFVAKDVCDALTIDTSNLSKLLDDDERSTC-------PVQYTDQVRAVSIINESGLYSL 84
Query: 78 LVKSTLPSAQKFERW 92
+++S P A++F++W
Sbjct: 85 ILRSRKPEAKRFKKW 99
>gi|167836444|ref|ZP_02463327.1| BRO family, N-terminal domain protein [Burkholderia thailandensis
MSMB43]
Length = 71
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ISE +Y L+++S P A++F +WV EVLP++RK G Y ++
Sbjct: 1 MISESGLYALVMRSNKPIAREFRKWVTSEVLPSIRKHGMYMMQ 43
>gi|224477019|ref|YP_002634625.1| hypothetical protein Sca_1535 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421626|emb|CAL28440.1| hypothetical protein SCA_1535 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 209
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSN--------EAINAHCKGVAK--RYPLK 58
F +IR ++KD W VA DVA LGY ++ E + H V ++ K
Sbjct: 6 FNDKEIR-FIEKDDEYWAVAGDVAKVLGYSQTSNMLRMIDKEDVTTHNVKVTSNSKFARK 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T Q +ISE +Y + S AQ+F++WV ++V+ LR +A L+
Sbjct: 65 T----QPASVISEYGIYEAIWNSRRDEAQEFKKWV-KQVIKELR-------QATGLKGYE 112
Query: 119 ASTVLRVHKHLEELA 133
A +L K E +A
Sbjct: 113 AFRMLDKQKQKEAMA 127
>gi|209401113|ref|YP_002273982.1| baculovirus repeated ORF a [Helicoverpa armigera NPV NNg1]
gi|209364365|dbj|BAG74624.1| baculovirus repeated ORF a [Helicoverpa armigera NPV NNg1]
Length = 361
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKR 54
++T +F ++ T VD + W VA A AL Y +N+AI N +
Sbjct: 2 SLTKIQFGDKEVETYTVDFNGEKWMVANPFAEALDYSRANKAIFEKVSAENQRTYDQIRS 61
Query: 55 YPLKTEGGI---------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ + + K + I+ V+ L+ S +P A++F+ W ++LPTL + G
Sbjct: 62 HRISATDCVTSPLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPTLCQEG 121
Query: 106 SYSV--EAP 112
Y + +AP
Sbjct: 122 EYKMARDAP 130
>gi|9631039|ref|NP_047709.1| Ld-bro-d [Lymantria dispar MNPV]
gi|3822307|gb|AAC70258.1| Ld-bro-d [Lymantria dispar MNPV]
Length = 510
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ EP VY L+ +ST P A++ ++V+E +LPT+RKTG + E PK
Sbjct: 92 FVLEPGVYALMARSTKPMAKEKMKYVYETILPTIRKTGRF--ETPK 135
>gi|302559595|ref|ZP_07311937.1| DNA-binding protein [Streptomyces griseoflavus Tu4000]
gi|302477213|gb|EFL40306.1| DNA-binding protein [Streptomyces griseoflavus Tu4000]
Length = 339
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTEGGIQ 64
++R + D WF A DV LG+ NS +A+ H + V Y L G +
Sbjct: 30 RVRRLTMPDGTHWFPAVDVCKELGHTNSRKALADHVPEEQREILETVTGGYGLSVPAGRE 89
Query: 65 ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+++IS + L+ T P+ F++WV EV+ T+++ GSY+++
Sbjct: 90 WRRDLQVISLQGLVLLVNACTKPACAPFKQWV-AEVIETVQREGSYTLD 137
>gi|258511151|ref|YP_003184585.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477877|gb|ACV58196.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 149
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
D WF A V A+G N +AI + GG +++ ++ E + RL +
Sbjct: 20 DGEPWFDAVGVCEAMGLRNIEKAIRRLDDDEKGLVTVDNAGGREEILVVRESGMLRLALA 79
Query: 81 STLPSAQKFERWVFEEVLP 99
P A+ F+RWV EVLP
Sbjct: 80 GREPHARAFQRWVVREVLP 98
>gi|325152623|gb|ADY88158.1| BRO-B [Helicoverpa armigera SNPV]
Length = 136
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+T +F ++++ I KD N +W +A A L Y N+ +AI+ + + + + L++
Sbjct: 2 AVTTVQFANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVE-INNQKILESI 60
Query: 61 GGIQ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--S 108
Q K + I+ ++ L+ S +P A++F W+ ++LP L G Y +
Sbjct: 61 QSAQLGQITSSLHPKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDDGKYDMA 120
Query: 109 VEAP 112
+AP
Sbjct: 121 TDAP 124
>gi|21668326|emb|CAC84474.1| AV1-BRO-l10 protein [Spodoptera frugiperda ascovirus 1a]
Length = 268
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-----PLKTEG 61
F S ++ T+VD W A A ALGY + AI + ++Y ++T
Sbjct: 8 FAGRSLEVFTVVDSTGEKWHQANPFADALGYSIHHLAITKYVSKQNQKYYSEIGSMRTTS 67
Query: 62 ---------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-- 109
IQ K I+ V+ L+ S +P+A++F W ++LPTL G Y++
Sbjct: 68 TDESSVSPPSIQAKTNFINTAGVFELINASEMPAAKRFRTWENNDLLPTLCHEGEYNMAK 127
Query: 110 EAPKLRATSASTV 122
+AP A + V
Sbjct: 128 DAPADVAVGMNAV 140
>gi|331018931|gb|EGH98987.1| BRO domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 143
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
V + WF +D+A +G + + L ++G QK +IS+ VY L
Sbjct: 29 VRLEYQCWFSLQDMARLMGKALDERSTRKLDSDQHRHVWLHSQGEWQKCLMISDSGVYAL 88
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLR 102
LV +P + +W+ EV+PTLR
Sbjct: 89 LVHHCVPENRALRQWLSSEVIPTLR 113
>gi|285002437|ref|YP_003422501.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343697|gb|ACH69512.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 281
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAH---CKGVAKRYPLKTEGGIQ-------- 64
T VD++ W VA A AL Y N N AI H C Y G I+
Sbjct: 43 TKVDENGEPWMVANPFADALNYSNVNRAIRIHVSECNVKNFEYFRSLRGSIRDANDSLFS 102
Query: 65 ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
K + I++ + L++KS + A +F W+ E+ P+L+
Sbjct: 103 LHPKTKFINKAGLLELVLKSRMRYAAEFRYWLVNELFPSLK 143
>gi|237795787|ref|YP_002863339.1| anti-repressor [Clostridium botulinum Ba4 str. 657]
gi|229262818|gb|ACQ53851.1| anti-repressor [Clostridium botulinum Ba4 str. 657]
Length = 287
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 7 FEFESNKIRTIVDKDQNIWF------VAKDVATALGY-ENS--------NEAINAHCKGV 51
F F+ I + +D N F K LGY ENS +E V
Sbjct: 8 FRFKGQAIDILTKEDVNFEFDGDFLIHGKQTVQNLGYSENSKPLRELEEDEKYLVKNSDV 67
Query: 52 AKRY--PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K++ L G I I+E +Y L S L SA++F +WV +EVLP++R+ G+Y
Sbjct: 68 LKQHYRKLNNAGEI----FITESGLYSLAFNSKLQSAKEFTKWVKKEVLPSIRRHGAYMT 123
Query: 110 E 110
E
Sbjct: 124 E 124
>gi|215401251|ref|YP_002332555.1| BRO-A [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448751|gb|ACH88541.1| BRO-A [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 331
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKRYPLK----TEGGI 63
++ ++ DK+ +W +A A L Y N+AI +H K K P + T
Sbjct: 14 EVVSLRDKEGQLWMLANPFAKILEYSVLNKAIWSHVSEPNKKNFEKLQPFQHGMVTSSLH 73
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSAST 121
+ + I+ ++ L+ S +P AQ+F W+ ++L L TG Y + +AP A +
Sbjct: 74 PQSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDAPADIAEGMNV 133
Query: 122 VLRVH---------KHLEELAKQAGLKDNQLLLK 146
+ V K L E + LKD + +K
Sbjct: 134 LHSVTNDGKNALWVKDLSEFKQIVALKDQIIAMK 167
>gi|29567179|ref|NP_818741.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467955|dbj|BAC67345.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 201
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGGI------- 63
+I ++ +D +W +A A L Y +N+AI + K+ +K+ I
Sbjct: 54 EIISVTTEDNQLWILASPFAKLLFYTKANDAIELYVSKENKKIYKDIKSSRCIPTTVVIR 113
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K + I+ ++ L+ S +P+ KF+RW+ ++LP + + YS+
Sbjct: 114 HKSKFINCAGLFELIDASLMPNIHKFKRWIEYKLLPVINQIKDYSI 159
>gi|71275343|ref|ZP_00651629.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71163643|gb|EAO13359.1| phage-related protein [Xylella fastidiosa Dixon]
Length = 196
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAKRYPLKT--------EGGIQK 65
I+D D + A D+A ALGY + + N H + L G +K
Sbjct: 3 IIDHDGIPYLTAADLARALGYADERAVSRIYNRHSEEFTVEMSLVVNLTTKGFGSGNSEK 62
Query: 66 -VRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTV 122
R+ S + + + + A F RWV + EVLP++RKTGSYS + + +
Sbjct: 63 PTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALCAI 122
Query: 123 LRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ H ++L + + + K Q L + G T+I+G
Sbjct: 123 WFLCDHFKKLHEMSRVNKVPQALYWL--GATEISG 155
>gi|312873776|ref|ZP_07733820.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
gi|311090657|gb|EFQ49057.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
Length = 135
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTE 60
S I F FE N+I+ + + +F +DV L +++ A +GV L T
Sbjct: 6 SGIQTFYFEHNRIQMMA-IGSDPYFSLEDVCEILKIKDTKRAKTRLDEQGVCDAMTL-TS 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G QK ISE ++YRL+ KS KF W+ EVLP
Sbjct: 64 SGFQKKDFISETNLYRLIFKSHRLENIKFAVWMTSEVLPIF 104
>gi|160915526|ref|ZP_02077737.1| hypothetical protein EUBDOL_01534 [Eubacterium dolichum DSM 3991]
gi|158432646|gb|EDP10935.1| hypothetical protein EUBDOL_01534 [Eubacterium dolichum DSM 3991]
Length = 237
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-----HCKGVAKRYPLKTEGGIQKVR 67
KIR + ++D +I +D A LG+ + N K + + T G +
Sbjct: 15 KIRAMENEDGSISVNLEDAARGLGFTTVATSGNVVVRWNRVNQYLKEFNVPTCG---RDD 71
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPK-----LRATSAST 121
I EP Y L +K+ +A+KF+ WV +VLP +R+TG Y + + P+ L + S
Sbjct: 72 FIPEPIFYLLAMKANNDTAKKFQIWVATDVLPQVRRTGGYRLPQTPEEKIRLLLEANQSA 131
Query: 122 VLRVHKHLEELAKQAGLKDNQLL 144
++ K E + + L+DN+ L
Sbjct: 132 NTKIEKVEERV---SNLEDNRFL 151
>gi|77457267|ref|YP_346772.1| hypothetical protein Pfl01_1040 [Pseudomonas fluorescens Pf0-1]
gi|77381270|gb|ABA72783.1| putative BRO-like protein [Pseudomonas fluorescens Pf0-1]
Length = 170
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
D WF A+D+ +G+ + + L G + + ++SE ++ LLV
Sbjct: 33 DHQAWFCAQDLGRMMGHPLNPRVTLKLDPDQRRTVRLSKYGKVVETPMVSESGMFALLVH 92
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVE-APKLRATSASTV 122
+P + +W+ EV+P LR+T S + E P L + + V
Sbjct: 93 HFIPENRNLRQWLSNEVIPILRETSSVTAENCPSLSSMHWAGV 135
>gi|71901482|ref|ZP_00683569.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71728738|gb|EAO30882.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 214
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK---------GVAKRYPLKTEG 61
S K +I+D+D A D+A ALGY++++ + + + + + +K G
Sbjct: 11 SGKSLSIIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTSEMSLTVKLTVKGFG 70
Query: 62 ---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRA 116
+ VR+ S + + + + A F RWV + E +P++RKTGSY+ A
Sbjct: 71 CGNSEKPVRLFSPRGCHMVAMFARTSVAAAFRRWVLDVLEFMPSIRKTGSYTSN----NA 126
Query: 117 TSASTVLRV----HKHLEELAKQAGLKDNQL 143
S +TV R K L+ + G++ QL
Sbjct: 127 VSLTTVRRCGTVASKELQN-SCSGGIRTRQL 156
>gi|31544005|ref|NP_852730.1| hypothetical protein Aaphi23p08 [Haemophilus phage Aaphi23]
gi|31408049|emb|CAD90783.1| hypothetical protein [Haemophilus phage Aaphi23]
Length = 218
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYP--- 56
M+T+T F+S + I +Q IW ++ ALGY + +++ N + + + P
Sbjct: 1 MTTLT---FQSTTLSAIHQNNQ-IWLTVTEIGKALGYSDPFKSVKNIYDRHADEFTPQMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
++T GGIQKVRI S + + + S A+ F RWV +
Sbjct: 57 ALIDMRTNGGIQKVRIFSLRGAHLIGMLSHTKVAKDFRRWVLD 99
>gi|330985976|gb|EGH84079.1| BRO domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 179
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 25 WFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF +D+A +G E + ++A + A L T+G QK +ISE V+ LL+
Sbjct: 36 WFPLEDIARLMGKRLDERNTRKLDADQRRTAW---LLTQGEWQKCLLISESAVFALLIHH 92
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+P + RW+ ++VLP L
Sbjct: 93 YIPENRALRRWLTQDVLPAL 112
>gi|326408304|gb|ADZ65369.1| BRO family protein [Brucella melitensis M28]
gi|326538018|gb|ADZ86233.1| antirepressor protein ANT [Brucella melitensis M5-90]
Length = 65
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 3 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 41
>gi|9631038|ref|NP_047708.1| Ld-bro-c [Lymantria dispar MNPV]
gi|3822306|gb|AAC70257.1| Ld-bro-c [Lymantria dispar MNPV]
Length = 528
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ EP VY L+ +ST P A++ ++V+E +LPT+RKTG + +
Sbjct: 92 FVLEPGVYALMARSTKPMAKEKMKFVYETILPTIRKTGKFEM 133
>gi|312873619|ref|ZP_07733666.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2052A-d]
gi|311090872|gb|EFQ49269.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2052A-d]
Length = 59
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKFADWVMYEVLPAIVYKGVY 42
>gi|325152617|gb|ADY88154.1| BRO-B [Helicoverpa armigera SNPV]
gi|325152620|gb|ADY88156.1| BRO-B [Helicoverpa armigera SNPV]
Length = 145
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHCKG---------V 51
+T +F ++++ I KD N +W +A A L Y N+ +AI+ + +
Sbjct: 2 AVTTVQFANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVEINNQKILESIQ 61
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SV 109
+ R T K + I+ ++ L+ S +P A++F W+ ++LP L G Y +
Sbjct: 62 SARLGQITSSLHPKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDDGKYDMAT 121
Query: 110 EAP 112
+AP
Sbjct: 122 DAP 124
>gi|33331735|gb|AAQ11043.1| BRO-B [Mamestra configurata NPV-A]
Length = 331
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKRYPLK--- 58
F + ++ ++ D+ +W +A A L Y N+AI +H K + K P +
Sbjct: 8 FGTQDLEVVSLRDEKGQLWMLANPFAKILEYSVLNKAIWSHVSEPNKKNLEKLQPFQHGM 67
Query: 59 -TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE------- 110
T + + I+ ++ L+ S +P AQ+F W+ ++L L TG Y ++
Sbjct: 68 VTSSLHPQSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDAPADI 127
Query: 111 APKLRATSAST-----VLRVHKHLEELAKQAGLKDNQLLLK 146
A + A A+T L + K L EL + LKD + +K
Sbjct: 128 AEGMNAVHAATNDGKEALWI-KDLSELKQIVALKDQIIAIK 167
>gi|27365825|ref|NP_761353.1| prophage antirepressor [Vibrio vulnificus CMCP6]
gi|27361974|gb|AAO10880.1| Prophage antirepressor [Vibrio vulnificus CMCP6]
Length = 251
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+G ++ ++EP VYR+ +++ A+KF+ WV +EV+P++R+ G Y
Sbjct: 74 VDGKEERHYYVTEPGVYRVAMQAKSSGAKKFQNWVLKEVMPSIRRFGIY 122
>gi|218886740|ref|YP_002436061.1| prophage antirepressor [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757694|gb|ACL08593.1| prophage antirepressor [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 294
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVAKRYP 56
T F+S+++ ++D++ W V TALGY + AI + +
Sbjct: 3 TSLVFQSHQL-DVIDQNGQPWVRGYQVGTALGYSAPDLAIRKIYDRHADEFTDSMTAMVT 61
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
L T GG Q+ RI S + L + + P A+ F WV +VL TL + + AP L
Sbjct: 62 LPTPGGPQETRIFSLRGCHLLAMFARTPVAKAFRAWVL-DVLETLGEAEACQPVAPHL 118
>gi|309805368|ref|ZP_07699417.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 09V1-c]
gi|308165295|gb|EFO67529.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 09V1-c]
Length = 59
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKFADWVMYEVLPAIVYKGVY 42
>gi|22549422|ref|NP_689195.1| BRO-A [Mamestra configurata NPV-B]
gi|22476601|gb|AAM95007.1| BRO-A [Mamestra configurata NPV-B]
Length = 353
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLK------------ 58
++ ++ D++ +W +A A L Y +N+A+ H +R+ LK
Sbjct: 14 EVVSLRDEEGQLWMLANPFAKILEYSKANKAVATHVSSQNQRFWEELKSYHSGTTSMTSS 73
Query: 59 ----------------TEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
T +Q K + I+ ++ L+ S +P AQ+F W+ ++LP L
Sbjct: 74 SQHENISSPQFEEIGMTSSSVQAKSKFINRSGLFELIQASIMPKAQEFRNWINSDLLPKL 133
Query: 102 RKTGSYSV--EAP 112
+ G+Y++ +AP
Sbjct: 134 CENGNYNMATDAP 146
>gi|251780272|ref|ZP_04823192.1| BRO domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084587|gb|EES50477.1| BRO domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 246
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-------LKTEGG--- 62
++RTI + D +I A+D A G+ + AK+YP T+ G
Sbjct: 26 RVRTIQNDDGSISINAEDTAIGFGW---------YQIKSAKKYPKWERINSFITDLGFSP 76
Query: 63 -IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++K I E Y L +K+ +A F++W+ +V+P++RKTG Y + PK+
Sbjct: 77 QVEKDDFIPESLFYMLAMKANNKAAYDFQKWLAVDVIPSIRKTGLY--QMPKM 127
>gi|289624292|ref|ZP_06457246.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289646581|ref|ZP_06477924.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298487062|ref|ZP_07005113.1| BRO family, N-terminal domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298158415|gb|EFH99484.1| BRO family, N-terminal domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330870140|gb|EGH04849.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 179
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 25 WFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF +D+A +G E + ++A + A L T G QK +ISE V+ LL+
Sbjct: 36 WFPLEDIARLMGKRLDERNTRKLDADQRRTAW---LLTHGEWQKCLLISESAVFALLIHH 92
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+P + RW+ ++VLP L
Sbjct: 93 YIPENRALRRWLTQDVLPAL 112
>gi|290958941|ref|YP_003490123.1| hypothetical protein SCAB_45151 [Streptomyces scabiei 87.22]
gi|260648467|emb|CBG71578.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 323
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAK 53
I+ F + + ++R + D WF A DV LG+ + ++A++ H + V++
Sbjct: 23 ISDFVYAATGARVRRLTMPDGAHWFPAVDVCKELGHTSPSKAVSDHVPLEHRAALETVSR 82
Query: 54 RYPLKTEGGIQKVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
Y L G R +I + L+ T P+A F++W EV+ T+++ GSY++E
Sbjct: 83 TYGLSIPAGRGWRRDLILIDMQGLLFLVTACTKPTAAPFKQWAV-EVIETVQREGSYTLE 141
>gi|237814748|ref|ZP_04593746.1| BRO family protein [Brucella abortus str. 2308 A]
gi|254690577|ref|ZP_05153831.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|254696702|ref|ZP_05158530.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254731610|ref|ZP_05190188.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|256258832|ref|ZP_05464368.1| BRO family protein [Brucella abortus bv. 9 str. C68]
gi|237789585|gb|EEP63795.1| BRO family protein [Brucella abortus str. 2308 A]
Length = 81
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 19 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 57
>gi|225573757|ref|ZP_03782512.1| hypothetical protein RUMHYD_01959 [Blautia hydrogenotrophica DSM
10507]
gi|225038902|gb|EEG49148.1| hypothetical protein RUMHYD_01959 [Blautia hydrogenotrophica DSM
10507]
Length = 227
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 9 FESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAI------------NAHCKGVAKRY 55
FE +R I K+++ IWF A DV LG N + + N GV Y
Sbjct: 5 FEERNVRIICSKNRSEIWFSAIDVGEELGIANIRDTLRNIDRSEKKKFTNEMISGVGVFY 64
Query: 56 ------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
PL G +SE VY + +S P A+ F +WV +VL +R G Y +
Sbjct: 65 TRNFNSPLNNYGET----FVSEEAVYNMAFRSNKPEAKLFTKWV-TKVLKQIRVNGFYVL 119
Query: 110 EA 111
+
Sbjct: 120 DG 121
>gi|260546549|ref|ZP_05822289.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus NCTC 8038]
gi|260756145|ref|ZP_05868493.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 6
str. 870]
gi|260759369|ref|ZP_05871717.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 4
str. 292]
gi|260761090|ref|ZP_05873433.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260885164|ref|ZP_05896778.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 9
str. C68]
gi|260096656|gb|EEW80532.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus NCTC 8038]
gi|260669687|gb|EEX56627.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 4
str. 292]
gi|260671522|gb|EEX58343.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260676253|gb|EEX63074.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 6
str. 870]
gi|260874692|gb|EEX81761.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 9
str. C68]
Length = 96
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 34 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMY 72
>gi|302876357|ref|YP_003844990.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579214|gb|ADL53226.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 266
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALG-----------YENSN-EAINAHCKGVAKRYPL 57
E ++RTI++ D +I A+DVA G YE+ E +NA + +P
Sbjct: 12 EIGEVRTILNDDGSISVNAEDVARGFGWSRIQSINGKDYESIRWERMNAFINELG-FHPQ 70
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
EG I E Y L +K+ +AQKF+ W+ ++V+P++RK G Y E
Sbjct: 71 VGEGDF-----IPETLFYLLGMKANNETAQKFQMWLAKDVIPSIRKYGLYITE 118
>gi|330891087|gb|EGH23748.1| BRO domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 179
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 25 WFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF +D+A +G E + ++A + A L T G QK +ISE V+ LL+
Sbjct: 36 WFPLEDIARLMGKRLDERNTRKLDADQRRTAW---LLTHGEWQKCLLISESAVFALLIHH 92
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+P + RW+ ++VLP L
Sbjct: 93 YIPENRALRRWLTQDVLPAL 112
>gi|71735908|ref|YP_274685.1| BRO domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556461|gb|AAZ35672.1| BRO family, N-terminal domain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320324473|gb|EFW80550.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328406|gb|EFW84409.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 179
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 25 WFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF +D+A +G E + ++A + A L T G QK +ISE V+ LL+
Sbjct: 36 WFPLEDIARLMGKRLDERNTRKLDADQRRTAW---LLTHGEWQKCLLISESAVFALLIHH 92
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+P + RW+ ++VLP L
Sbjct: 93 YIPENRALRRWLTQDVLPAL 112
>gi|257488032|ref|ZP_05642073.1| BRO domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331008703|gb|EGH88759.1| BRO domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 179
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 25 WFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF +D+A +G E + ++A + A L T G QK +ISE V+ LL+
Sbjct: 36 WFPLEDIARLMGKRLDERNTRKLDADQRRTAW---LLTHGEWQKCLLISESAVFALLIHH 92
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+P + RW+ ++VLP L
Sbjct: 93 YIPENRALRRWLTQDVLPAL 112
>gi|134287196|ref|YP_001110892.1| Bro2 [Heliothis virescens ascovirus 3e]
gi|133722104|gb|ABO37226.1| Bro2 [Heliothis virescens ascovirus 3e]
Length = 352
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKRYP 56
++T +F ++ T +D + W VA A AL Y N AI K +
Sbjct: 2 SLTKIQFGDKEVETYTIDLNGEKWMVANPFAEALSYSNCKNAITKFVTTKNQKNYEEIKS 61
Query: 57 LKTEG---------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
TE IQ K + I+ V+ L+ S +P A++F+ W ++LP+L + G
Sbjct: 62 PHTEATKIVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQEGE 121
Query: 107 YSV--EAP 112
Y + +AP
Sbjct: 122 YKMVRDAP 129
>gi|298695301|gb|ADI98523.1| putative prophage antirepressor [Staphylococcus aureus subsp.
aureus ED133]
Length = 213
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYE---NSNEAINAHCKGVAKRYPL---KTEGG 62
F + +IR ++K+ W +A DVA LG+ N+ + + H +G K K
Sbjct: 6 FNNKEIR-FIEKNNEYWAIATDVAKVLGFRDAFNATKYLPEHVRGTLKGSTTSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q +I+E +YRL+++S A F+ W+ +VL LR
Sbjct: 65 YQDYTVINEKGIYRLVMRSNKAEALDFQDWIC-DVLVELR 103
>gi|9635359|ref|NP_059257.1| ORF109 [Xestia c-nigrum granulovirus]
gi|6175753|gb|AAF05223.1|AF162221_109 ORF109 [Xestia c-nigrum granulovirus]
Length = 308
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGV---------AKRYPLKTEGG-----IQ-KVRIIS 70
VA A AL Y N N AI H + R L + IQ K + I+
Sbjct: 1 MVANPFAEALNYSNVNRAIRVHVSNQNQKCMEELRSDRCGLTDDSSCLPRNIQAKTKFIN 60
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
V+ L+ S +P+A++F+ W ++LPTL G Y++
Sbjct: 61 RAGVFELINASEMPAAKRFKAWNSNDLLPTLCTDGEYNM 99
>gi|126417602|gb|ABO13903.1| BRO-b [Bombyx mori NPV]
Length = 239
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 4 ITPFEFESNK--IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R ++ +Q + FVAKD+A +L Y + +A+ H G K +
Sbjct: 6 IGQFKFGQDEFTLRYVLGDEQPVKFVAKDIAISLKYASYEKAVRVHVDGKYKYTFEQACI 65
Query: 62 GIQKVRIISEPD---------------VYRLLVKSTLPSAQKFERWVFEEVLP 99
I K + + D V +LL++S + +A + + W +E VLP
Sbjct: 66 NISKENRVKQGDPLYLSPQTILLDKIGVIQLLMRSKMHNAAELQNWFYEYVLP 118
>gi|310828617|ref|YP_003960974.1| antirepressor [Eubacterium limosum KIST612]
gi|308740351|gb|ADO38011.1| antirepressor [Eubacterium limosum KIST612]
Length = 190
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKG--VAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WFV KDV ALGY++ A+ H + V KR QK+ +++E + L++
Sbjct: 80 WFVVKDVCRALGYKSHCGALRTHVRSEDVTKREIRDANNHRQKMLVVNERGLDALILGGR 139
Query: 83 LPSAQKFERWVFEEVLPTLR 102
L +A F+ ++ +LP++R
Sbjct: 140 LHAAPFFKGYITGVILPSIR 159
>gi|66395230|ref|YP_239526.1| ORF015 [Staphylococcus phage 187]
gi|122891722|ref|YP_001004268.1| anti-repressor protein [Staphylococcus phage phiETA2]
gi|122891792|ref|YP_001004337.1| anti-repressor protein [Staphylococcus phage phiETA3]
gi|148267289|ref|YP_001246232.1| prophage antirepressor [Staphylococcus aureus subsp. aureus JH9]
gi|150393339|ref|YP_001316014.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|253316884|ref|ZP_04840097.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|257794849|ref|ZP_05643828.1| anti-repressor protein [Staphylococcus aureus A9781]
gi|258418165|ref|ZP_05682430.1| anti-repressor protein [Staphylococcus aureus A9763]
gi|258421462|ref|ZP_05684387.1| prophage antirepressor [Staphylococcus aureus A9719]
gi|258448941|ref|ZP_05697050.1| prophage antirepressor [Staphylococcus aureus A6224]
gi|258453919|ref|ZP_05701891.1| prophage antirepressor [Staphylococcus aureus A5937]
gi|282929264|ref|ZP_06336837.1| antirepressor [Staphylococcus aureus A10102]
gi|295406558|ref|ZP_06816364.1| antirepressor [Staphylococcus aureus A8819]
gi|297245284|ref|ZP_06929158.1| antirepressor [Staphylococcus aureus A8796]
gi|62635582|gb|AAX90693.1| ORF015 [Staphylococcus phage 187]
gi|121309201|dbj|BAF43823.1| anti-repressor protein [Staphylococcus phage phiETA2]
gi|121309271|dbj|BAF43892.1| anti-repressor protein [Staphylococcus phage phiETA3]
gi|147740358|gb|ABQ48656.1| prophage antirepressor [Staphylococcus aureus subsp. aureus JH9]
gi|149945791|gb|ABR51727.1| BRO domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|257788821|gb|EEV27161.1| anti-repressor protein [Staphylococcus aureus A9781]
gi|257838958|gb|EEV63437.1| anti-repressor protein [Staphylococcus aureus A9763]
gi|257842388|gb|EEV66812.1| prophage antirepressor [Staphylococcus aureus A9719]
gi|257857837|gb|EEV80729.1| prophage antirepressor [Staphylococcus aureus A6224]
gi|257863784|gb|EEV86540.1| prophage antirepressor [Staphylococcus aureus A5937]
gi|269939846|emb|CBI48216.1| phage protein [Staphylococcus aureus subsp. aureus TW20]
gi|282589140|gb|EFB94238.1| antirepressor [Staphylococcus aureus A10102]
gi|285816533|gb|ADC37020.1| Antirepressor [Staphylococcus phage phiSaST5K]
gi|294968703|gb|EFG44726.1| antirepressor [Staphylococcus aureus A8819]
gi|297177955|gb|EFH37204.1| antirepressor [Staphylococcus aureus A8796]
gi|315128953|gb|EFT84950.1| BRO domain protein [Staphylococcus aureus subsp. aureus CGS03]
Length = 255
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 MSTITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRY 55
M+ I F SN + +I+ K ++N F + VA +LG+ +N + I
Sbjct: 1 MNEIKTF---SNDMFSILIKQDNENNLFDLETVAKSLGFTQFKNGKQYIRWETINKYLGK 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L E G K I EP VY+L K+ A+KF+ W+ EVLP +RK G Y+ +
Sbjct: 58 YLSQEVG--KGDFIPEPMVYKLAFKAGNAVAEKFQDWLAMEVLPAIRKHGIYATD 110
>gi|254975173|ref|ZP_05271645.1| prophage antirepressor-related protein [Clostridium difficile
QCD-66c26]
gi|255092563|ref|ZP_05322041.1| prophage antirepressor-related protein [Clostridium difficile CIP
107932]
gi|255314300|ref|ZP_05355883.1| prophage antirepressor-related protein [Clostridium difficile
QCD-76w55]
gi|255516980|ref|ZP_05384656.1| prophage antirepressor-related protein [Clostridium difficile
QCD-97b34]
gi|255650082|ref|ZP_05396984.1| prophage antirepressor-related protein [Clostridium difficile
QCD-37x79]
gi|260683214|ref|YP_003214499.1| prophage antirepressor-related protein [Clostridium difficile
CD196]
gi|260686810|ref|YP_003217943.1| prophage antirepressor-related protein [Clostridium difficile
R20291]
gi|306519615|ref|ZP_07405962.1| prophage antirepressor-related protein [Clostridium difficile
QCD-32g58]
gi|260209377|emb|CBA62823.1| prophage antirepressor-related protein [Clostridium difficile
CD196]
gi|260212826|emb|CBE04009.1| prophage antirepressor-related protein [Clostridium difficile
R20291]
Length = 288
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 58/226 (25%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + EF ++I T + K+++ W +A + Y + ++ I K A+ + ++ E
Sbjct: 1 MKNLIVKEFNGSQIYTFMWKEKSCW-IANQIVGLFDYADVSKTIQDCIK--AEDFEIEQE 57
Query: 61 GGIQK-------------------------VRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ K + I E +Y L + P +F +W+
Sbjct: 58 YDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRR 117
Query: 96 EVLPTLRKTGSY-------------SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
EVLP++R+TG+Y + E KL+ ST + L+EL AG DN+
Sbjct: 118 EVLPSIRQTGAYITNNANPEKLREKASEIEKLQLAYNSTSM-----LKELLDGAGF-DNK 171
Query: 143 LLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE--YLTITQIGERL 186
L + + K G+D LP N+E Y QI +L
Sbjct: 172 SKLLTAKTLYKKAGID---------LPIEINEEEHYFDTKQIASKL 208
>gi|70731106|ref|YP_260847.1| Sb46 [Pseudomonas fluorescens Pf-5]
gi|68345405|gb|AAY93011.1| Sb46 [Pseudomonas fluorescens Pf-5]
Length = 268
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 132 LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQR 191
+A+ GL+ NQ LL N V GVD +E +K L + + T T++G +
Sbjct: 126 IAESFGLEGNQALLSANSMVKSAIGVDLMEMAGVKRLVNESQEMNFTPTELGAKFGIS-- 183
Query: 192 ARFLNKLLLKRGLQVSKVSGGYRP-------TPKGEERGGKMCDVPMQHVEGS-TQQLKW 243
A +NKLL GLQ + Y+P TP G+ + D +H +G QQ+ W
Sbjct: 184 AASMNKLLADCGLQHHVI---YKPGKKRWEVTPDGKLF-AVITDTGKKHSDGKPVQQILW 239
Query: 244 NSNL 247
++
Sbjct: 240 KESV 243
>gi|153212070|ref|ZP_01947887.1| BRO family, N- domain protein [Vibrio cholerae 1587]
gi|124116866|gb|EAY35686.1| BRO family, N- domain protein [Vibrio cholerae 1587]
Length = 260
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-------GVAKRYPLKTEGGIQK-VR 67
T ++K+ +W A D+A ALGY++ N + + G+++ L T G QK VR
Sbjct: 13 TPIEKEAQLWLSASDIANALGYKSPKSISNIYARYSDEFSSGMSEVINLMTSGNYQKSVR 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFE 95
I S + + + S A++F +WV +
Sbjct: 73 IFSLRGAHLIAMFSRTSIAKEFRKWVLD 100
>gi|239507365|ref|YP_002939673.1| hypothetical protein CUR004 [Staphylococcus phage phiPVL-CN125]
gi|238683990|gb|ACR54193.1| hypothetical protein CUR004 [Staphylococcus phage phiPVL-CN125]
Length = 113
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
WF A +VA LGY N +AI+ H K GV + + G Q + I E ++YRL+ +S
Sbjct: 25 WFPATEVAMTLGYSNPRDAISRHVKRRGVVNHDVIDSLGRKQNKKFIDEGNLYRLISRS 83
>gi|71275565|ref|ZP_00651850.1| similar to Prophage antirepressor [Xylella fastidiosa Dixon]
gi|71900790|ref|ZP_00682910.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71163456|gb|EAO13173.1| similar to Prophage antirepressor [Xylella fastidiosa Dixon]
gi|71729467|gb|EAO31578.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 202
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAKRYPLKTEGGIQ--- 64
S K I+D+D A D+A ALGY + + N H + + L ++
Sbjct: 11 SGKSLPIIDRDGVPHLTAADLARALGYADERSVSRIYNRHSEEFTYQMTLVVNLTVKGFG 70
Query: 65 ------KVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRA 116
VR+ S + + + + A F RWV + E +P++RKTG YS P
Sbjct: 71 SGNSDKPVRLFSPRGCHMVAMFARTSVAAAFRRWVLDVLEFMPSIRKTGGYSASHPPAVT 130
Query: 117 TSASTVLRVHKHLEELAKQ 135
+ R++ L +A
Sbjct: 131 LTEVEAFRLYALLRMVAGH 149
>gi|221141443|ref|ZP_03565936.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731462|ref|ZP_04865627.1| prophage L54a, antirepressor [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724705|gb|EES93434.1| prophage L54a, antirepressor [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|302751742|gb|ADL65919.1| prophage anitrepressor [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 254
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 MSTITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRY 55
M+ I F SN + +I+ K ++N F + VA +LG+ +N + I
Sbjct: 1 MNEIKTF---SNDMFSILIKQDNENNLFDLETVAKSLGFTQFKNGKQYIRWETINKYLGK 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L E G K I EP VY+L K+ A+KF+ W+ EVLP +RK G Y+ +
Sbjct: 58 YLSQEVG--KGDFIPEPMVYKLAFKAGNAVAEKFQDWLAMEVLPAIRKHGIYATD 110
>gi|116326849|ref|YP_803387.1| hypothetical protein TNAV2c_gp165 [Trichoplusia ni ascovirus 2c]
gi|102231857|gb|ABF70680.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 353
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 25 WFVAKDVATALGYENSNEAI-----NAHCKGVAKRYPLKTEG---------GIQ-KVRII 69
W VA A AL Y N+AI + + K + P + IQ K + I
Sbjct: 25 WMVANPFAEALNYRKPNKAILEKVSDGNQKTFDQIKPFRFSTTDCATSLPRNIQAKTKFI 84
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVLRVHK 127
+ V+ L+ S +P A++F+ W ++LP+L + G Y++ +AP A A + VH
Sbjct: 85 NRAGVFELINASDMPGAKRFKAWNNNDLLPSLCQEGEYNMVRDAP---ADIAHGMNAVHV 141
Query: 128 HLEELAKQAGLKD 140
E A+ +KD
Sbjct: 142 ATNEGAEAPWMKD 154
>gi|9630956|ref|NP_047553.1| BRO-e [Bombyx mori NPV]
gi|3745975|gb|AAC63822.1| BRO-e [Bombyx mori NPV]
Length = 241
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------CK 49
I F+F ++ +R ++ +Q + FVA+D+A L ++N+ +AI H C
Sbjct: 6 IGKFKFGEDTFTLRYVLGGEQPVRFVARDIANKLKFKNTKKAIRDHVDGKYKCTFEQACI 65
Query: 50 GVAKRYPLKTEGGI---QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
++K +K + + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 66 NISKEKHVKQGNPLYLQTQTILLDKIGVIQLFMRSKMTNAAELQNWFYEHVLP 118
>gi|85702815|ref|ZP_01033919.1| hypothetical BRO family protein [Roseovarius sp. 217]
gi|85671743|gb|EAQ26600.1| hypothetical BRO family protein [Roseovarius sp. 217]
Length = 163
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I++E +Y+L+++S P A+ F+ WV VLP++RK G Y
Sbjct: 102 IVTESGLYKLVMRSDKPEAKAFQDWVTGTVLPSIRKDGGY 141
>gi|66047047|ref|YP_236888.1| hypothetical protein Psyr_3820 [Pseudomonas syringae pv. syringae
B728a]
gi|63257754|gb|AAY38850.1| conserved domain protein [Pseudomonas syringae pv. syringae B728a]
gi|330971039|gb|EGH71105.1| hypothetical protein PSYAR_11124 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 181
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I + Q WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|330942435|gb|EGH45035.1| hypothetical protein PSYPI_22882 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 181
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F S +R I + Q WF D+A +G A + L+ G Q+
Sbjct: 19 FLRHSRTLRAIFTESQ-AWFCLADLARLMGRPLDERATLKLDADQRREVWLEAHGECQRQ 77
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 78 LMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|22549476|ref|NP_689249.1| BRO-C [Mamestra configurata NPV-B]
gi|22476655|gb|AAM95061.1| BRO-C [Mamestra configurata NPV-B]
Length = 326
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL------KTEG 61
EFE + ++ D + +W +A A L Y NS AI A V + L + E
Sbjct: 12 EFE---VVSVKDCNNQLWLLANPFARILQYANSRNAI-AKFVSVNNQLQLHDLKAPRIEA 67
Query: 62 GIQKV----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLR 115
+ + I+ ++ L+ S +P A++F WV ++L L TG Y + +AP
Sbjct: 68 LASSIHPQSKFINRAGLFELIQGSKMPKAKEFRNWVNSDLLIKLSDTGEYRMQTDAP--- 124
Query: 116 ATSASTVLRV-HK 127
TSAS + V HK
Sbjct: 125 -TSASEAMNVIHK 136
>gi|228861727|ref|YP_002854747.1| Bro-b [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425175|gb|ACO53587.1| Bro-b [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 348
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHC---------KGV 51
++T EF ++KI + Q+ W A A A+ Y N N AI H K
Sbjct: 2 SLTKIEF-ADKIVEVFKISQSGEDWMAANPFAEAMNYSNVNRAIRVHVAENNQKTLEKLQ 60
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ L T + + I+ V+ L+ S +P+A+KF++W ++ TL + G Y
Sbjct: 61 SDHCGLITSSLHPQTKFINRAGVFELINASEMPAAKKFKQWNTNDLWRTLCQEGEY 116
>gi|20069954|ref|NP_613158.1| BRO-d [Mamestra configurata NPV-A]
gi|20043348|gb|AAM09183.1| BRO-d [Mamestra configurata NPV-A]
gi|33331786|gb|AAQ11094.1| BRO-D [Mamestra configurata NPV-A]
Length = 329
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 3 TITPFEFESNKIRTIVDKDQN--IWFVAKDVATALGY-----------ENSNEAINAHCK 49
+ F + K+ + KD N +W +A A L Y N+N+ + K
Sbjct: 2 VVVKVNFGNQKLEVVSVKDCNNQLWLLANPFARILQYVSAPNAIAKFVSNNNQRSFENIK 61
Query: 50 GVAKRYPLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T +Q K + I+ ++ L+ S +P AQ+F++WV ++L L TG Y
Sbjct: 62 SHHSDETYVTSSYVQAKSKFINRAGLFELIQASKMPKAQEFKQWVNSDLLGKLSDTGEYR 121
Query: 109 V--EAPKLRATSASTVLRV-HK 127
+ +AP TSAS + V HK
Sbjct: 122 MQTDAP----TSASEAMNVIHK 139
>gi|289651265|ref|ZP_06482608.1| hypothetical protein Psyrpa2_26530 [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 170
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIF-TDAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL L S +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTVLHDQQSVTLDNPRM 125
>gi|9630900|ref|NP_047497.1| BRO-b [Bombyx mori NPV]
gi|3745919|gb|AAC63766.1| BRO-b [Bombyx mori NPV]
Length = 239
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 4 ITPFEFESNK--IRTIVDKDQNIWFVAKDVATALGYENSNEAINAH------------CK 49
I F+F ++ +R ++ +Q + FVAKD+A +L Y N +A+ H C
Sbjct: 6 IGQFKFGQDEFTLRYVLGDEQPVKFVAKDIARSLKYVNYEKAVRVHVDVKYKTTYEQACI 65
Query: 50 GVAKRYPLKTEGGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
++K +K + + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 66 NISKENRVKHGDPLYLSPQTILLDKIGVIQLFMRSKMHNAAELQNWFYEHVLP 118
>gi|289676893|ref|ZP_06497783.1| hypothetical protein PsyrpsF_26663 [Pseudomonas syringae pv.
syringae FF5]
Length = 181
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F S +R I + Q WF D+A +G A + L+ G Q+
Sbjct: 19 FLRHSRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQRQ 77
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 78 LMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|148750864|ref|YP_001285908.1| hypothetical protein [Lactobacillus phage LL-H]
gi|1395127|gb|AAB06221.1| hypothetical protein [Lactobacillus phage LL-H]
Length = 69
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH 47
I FEF+ N +RT+ + WFV KDVAT LGY + +A+ H
Sbjct: 5 IMNFEFDGNNVRTM-QINGEAWFVGKDVATVLGYARTADAVRKH 47
>gi|265754000|ref|ZP_06089355.1| antirepressor [Bacteroides sp. 3_1_33FAA]
gi|263235714|gb|EEZ21238.1| antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 208
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 16 TIVDKDQNIWFVAKDVATALGY-ENSNEAINAHC--------KGVAKRYPLKTEGGIQKV 66
T+ +N F+AK+VA + Y + SN + N + VA + T GG Q+V
Sbjct: 34 TVYGTAENPLFLAKEVAECIDYAKRSNGSYNTTMMLQSVDEEEKVAN--IVDTLGGNQQV 91
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++E +Y +L++S P A++F++ V +E+L +RKTG Y
Sbjct: 92 WFLTEDGLYEVLMQSRKPIAKEFKKGV-KEILKIIRKTGGY 131
>gi|9631121|ref|NP_047791.1| Ld-bro-o [Lymantria dispar MNPV]
gi|3822389|gb|AAC70340.1| Ld-bro-o [Lymantria dispar MNPV]
Length = 336
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 4 ITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-----P 56
+T EF + ++ T+ D++Q W VA A +L Y + AI+ V ++
Sbjct: 3 LTKVEFVNGPLEVFTVQDENQEKWMVANPFAESLKYAIPHIAISKFVSTVNQKTYEELRS 62
Query: 57 LKTEGGI--------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++ I K + I+ V+ L+ S +P+A++F+ W ++LPTL
Sbjct: 63 MRITSRITSTDDSSLLPRNVQAKTKFINRAGVFELISASEMPAAKRFKTWNTNDLLPTLC 122
Query: 103 KTGSYSV--EAP 112
G YS+ +AP
Sbjct: 123 AEGEYSMSKDAP 134
>gi|301063299|ref|ZP_07203844.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
gi|300442596|gb|EFK06816.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
Length = 110
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 4 ITPFEFESNKIRTIVD--KDQNIWFVAKDVATALGYENSNEAINA-------HCKGVAKR 54
I+ +F+ +R I KD +W A+D+ AL E + + + + +
Sbjct: 6 ISTRKFDGGPVRFIRSNGKDVELWMTAEDIGNALELEEPIKDVESIFQQHKDELEEMTML 65
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
P +GG ++R SE VY L S P A++F RWV
Sbjct: 66 MPAGRDGGSGEIRAFSEEGVYLLAFFSNSPKAKEFRRWV 104
>gi|9631080|ref|NP_047750.1| Ld-bro-i [Lymantria dispar MNPV]
gi|3822348|gb|AAC70299.1| Ld-bro-i [Lymantria dispar MNPV]
Length = 346
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ EP VY LL +S P A++ ++V+E +LPT+RKTG + +
Sbjct: 92 FVLEPGVYALLARSNKPLAKERMKFVYETILPTIRKTGKFEM 133
>gi|330977912|gb|EGH77815.1| hypothetical protein PSYAP_14210 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 181
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+RTI + Q WF D+A +G A + L+ G Q+ +ISE
Sbjct: 26 LRTIFTESQA-WFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQRQLMISESG 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 85 VLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|254780987|ref|YP_003065400.1| hypothetical protein CLIBASIA_04440 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040664|gb|ACT57460.1| hypothetical protein CLIBASIA_04440 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 110
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ GV+ L+ ++ LP+ +N Y T TQ+G++L A +NK L + G + + G
Sbjct: 4 VLGVNVLQDIN---LPTPNNLPYYTPTQLGKKLATKPSAIKVNKKLREWGFLLEEHESGR 60
Query: 214 RP---TPKGEERGGKMCDVPMQHVEGS-TQQLKWNSNLLVSF 251
+ TPKG + GG+ D + +G+ QQ+KW+ ++ S
Sbjct: 61 KRDVLTPKGAKGGGRYFDTGKKRSDGTIVQQIKWHPPIVESL 102
>gi|209978864|ref|YP_002300607.1| BRO C II [Adoxophyes orana nucleopolyhedrovirus]
gi|192758846|gb|ACF05381.1| BRO C II [Adoxophyes orana nucleopolyhedrovirus]
Length = 225
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--------PLKTEGGIQ 64
+I ++ +D +W +A A L Y +N+AI + K+ + T I+
Sbjct: 53 EIISVTTEDNQLWILASPFAKLLYYTKANDAIELNVSKENKKIYKEIKSINTMPTTTIIR 112
Query: 65 -KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
K + I+ ++ L+ S +P+ KF+RW+ ++LP + + +YS+ S+ +
Sbjct: 113 PKSKFINCAGLFELIDASFMPNIHKFKRWIEYKLLPVINQMENYSINHSIDENYSSKEI- 171
Query: 124 RVHKHLEELAKQAGLKDNQLL 144
E KQ LK N ++
Sbjct: 172 -------ETLKQTILKKNTII 185
>gi|9635409|ref|NP_059307.1| ORF159 [Xestia c-nigrum granulovirus]
gi|6175803|gb|AAF05273.1|AF162221_159 ORF159 [Xestia c-nigrum granulovirus]
Length = 408
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI------- 68
T VD+ W VA AT L Y N+A+ H + +K+ + RI
Sbjct: 59 TQVDEFGEPWMVANPFATVLQYYKPNDAVRKH----VSEWNVKSYEDFRSRRIGADDSSH 114
Query: 69 ---------------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EA 111
I+ ++ L+ S +P AQ+F+ WV ++LP L + G Y++ +A
Sbjct: 115 WVDEITSSLHPKTKFINRAGLFELIQSSRMPKAQEFKNWVNSDLLPKLCQEGEYNMAKDA 174
Query: 112 P 112
P
Sbjct: 175 P 175
>gi|9631082|ref|NP_047752.1| Ld-bro-k [Lymantria dispar MNPV]
gi|3822350|gb|AAC70301.1| Ld-bro-k [Lymantria dispar MNPV]
Length = 238
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------ 55
I F F ++ +R ++ +Q + FVAKD+A +L YE AI H V +Y
Sbjct: 6 IGQFRFGEDAFTLRYVLAAEQPVKFVAKDIARSLKYEKPANAIAKH---VDDKYKSAFEQ 62
Query: 56 ----PLKTEGG----IQKVRI-ISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
L+ + G + K I I + V +L ++S L +A + + W +E VLP
Sbjct: 63 LCFDDLRVKQGDPLYLHKSTILIDKIGVIQLFMRSKLHNAAELQNWFYERVLP 115
>gi|170765787|ref|ZP_02900598.1| BRO family, N- domain protein [Escherichia albertii TW07627]
gi|170124933|gb|EDS93864.1| BRO family, N- domain protein [Escherichia albertii TW07627]
Length = 263
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
QK +++P +YR++ + ++F++W+F EV+P+L K G Y
Sbjct: 84 QKEIFVTQPGLYRVMSSDRSAAGKRFQKWLFHEVIPSLTKHGVY 127
>gi|160898528|ref|YP_001564110.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364112|gb|ABX35725.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 317
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 4 ITP--FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
ITP F F IRT ++ IWF+AKDV TALG A + L +E
Sbjct: 15 ITPQTFHFGDIPIRTF-PRNGVIWFMAKDVCTALGISRHKLATGKLAEDQRCTVRLASEP 73
Query: 62 G----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G + V ++ ++ L+ S P ++F+RWV +VL
Sbjct: 74 GRKPRREAVAAVNADGLHALIQASPSPETKRFKRWVQRKVL 114
>gi|229080925|ref|ZP_04213440.1| Antirepressor, phage associated [Bacillus cereus Rock4-2]
gi|228702421|gb|EEL54892.1| Antirepressor, phage associated [Bacillus cereus Rock4-2]
Length = 258
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI----------ISEPDVY 75
F ++VA +LGY KG + E IQK I I+E +Y
Sbjct: 26 FNLENVAWSLGYTKV-------AKGKTYLRKDRIEKVIQKADISVIVHDGQPYITEDGLY 78
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L+ +S A++F +WV EVLP++RK G+Y
Sbjct: 79 ELIFESETQKAKEFRKWVTSEVLPSIRKHGAY 110
>gi|118197557|ref|YP_874269.1| Bro-a [Ecotropis obliqua NPV]
gi|113472552|gb|ABI35759.1| Bro-a [Ecotropis obliqua NPV]
Length = 326
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 25/132 (18%)
Query: 3 TITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAI----------------- 44
++T F ++ T VD D W VA A AL Y + AI
Sbjct: 2 SLTKVHFGDKEVETYTVDVDGEKWMVANPFAEALSYSIPHIAIAKFVTIKNQKSYDEIKS 61
Query: 45 --NAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
A G + P + K + I+ V+ L+ S +P A++F+ W ++LPTL
Sbjct: 62 IRTASSAGESSVIPRNIQA---KTKFINRAGVFELINASDMPGAKRFKAWNTNDLLPTLC 118
Query: 103 KTGSYSV--EAP 112
+ G Y + +AP
Sbjct: 119 QEGEYKMAKDAP 130
>gi|330938148|gb|EGH41860.1| BRO domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 143
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF +D+A +G + + L + G QK +IS+ +Y LLV
Sbjct: 34 QCWFSLQDMARLMGKALDERSTRKLDSDQHRHVWLHSHGEWQKCLMISDSGIYALLVHHY 93
Query: 83 LPSAQKFERWVFEEVLPTLR 102
+P + W+ EV+PTLR
Sbjct: 94 VPENRALRLWLSSEVIPTLR 113
>gi|114680000|ref|YP_758450.1| bro-i [Leucania separata nuclear polyhedrosis virus]
gi|39598731|gb|AAR28917.1| bro-i [Leucania separata nuclear polyhedrosis virus]
Length = 263
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 3 TITPFEFESNKIR--TIVDKDQNIWFVAKDVATALGYENSNEAI-------NAHC----K 49
++T +F +NK++ +I+D +W +A A L Y N+ AI N C K
Sbjct: 29 SVTTVQFANNKLKVVSIIDTTGQLWMLANPFARILEYSNAPNAISRFVSKNNWQCLKKIK 88
Query: 50 GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Y L R I++ + L++KS + A +F W+ E+ P+L+
Sbjct: 89 CQITNYSLHPSS-----RFINKAGLLELVLKSRMRYAAEFRFWLVNELFPSLK 136
>gi|282919703|ref|ZP_06327435.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|282316341|gb|EFB46718.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
Length = 255
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 MSTITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRY 55
M+ I F SN + +I+ K ++N F + VA +LG+ +N + I
Sbjct: 1 MNEIKTF---SNDMFSILIKQDNENNLFDLETVAKSLGFTQFKNGKQYIRWETINKYLGK 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L E G K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ +
Sbjct: 58 YLSQEVG--KGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATD 110
>gi|309805001|ref|ZP_07699058.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
09V1-c]
gi|308165660|gb|EFO67886.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
09V1-c]
Length = 116
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 25 WFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
+F +DV L +++ A +GV L T G QK ISE ++YRL+ KS
Sbjct: 9 YFNLEDVCEILKIKDTKRAKARLDEQGVCDAMTL-TSSGFQKKDFISETNLYRLIFKSRR 67
Query: 84 PSAQKFERWVFEEVLPTL 101
KF WV EVLP
Sbjct: 68 LENIKFAVWVMSEVLPVF 85
>gi|145632039|ref|ZP_01787784.1| possible prophage antirepressor [Haemophilus influenzae R3021]
gi|144982291|gb|EDJ89890.1| possible prophage antirepressor [Haemophilus influenzae R3021]
Length = 119
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP------- 56
+T F+ N ++++++ + A D+ AL Y +++ ++ A +
Sbjct: 1 MTTLTFQ-NTTLSVINQNNQTFLTASDLGKALDYSDADRSVRRLYTANADEFTTEMTALV 59
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
++T GGIQKVRI S + + + + A+ F +WV +
Sbjct: 60 EMQTAGGIQKVRIFSLRGAHLIAMFARTKVAKAFRKWVLD 99
>gi|283954051|ref|ZP_06371576.1| hypothetical protein C414_000080039 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794330|gb|EFC33074.1| hypothetical protein C414_000080039 [Campylobacter jejuni subsp.
jejuni 414]
Length = 211
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ T G+++ +I E +Y ++ S +A+ F WV EVLP++RK G+Y
Sbjct: 58 HSFDTGFGVKEFTMIDEAQLYYVMNNSRSKNAKPFRMWVNREVLPSIRKNGNY 110
>gi|302876389|ref|YP_003845022.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579246|gb|ADL53258.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 347
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 22 QNIWFVAKDVATALGYENS--NEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
QN F+AKD+A + Y+ S N+ +N R + T+GG Q++ ++E VY +L+
Sbjct: 201 QNPLFLAKDIAEWIEYDLSSINKMLNNVDVEEKVRKIVPTQGGQQEMWFLTEDGVYEVLM 260
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+S P A++F++ + + +L +R G Y K
Sbjct: 261 QSRKPIAKEFKKQI-KIILKNIRLKGGYVANENKF 294
>gi|282904500|ref|ZP_06312385.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus C160]
gi|282595056|gb|EFC00023.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus C160]
Length = 254
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 MSTITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRY 55
M+ I F SN + +I+ K ++N F + VA +LG+ +N + I
Sbjct: 1 MNEIKTF---SNDMFSILIKQDNENNLFDLETVAKSLGFTQFKNGKQYIRWETINKYLGK 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L E G K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ +
Sbjct: 58 YLSQEVG--KGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATD 110
>gi|47569650|ref|ZP_00240326.1| anti-repressor [Bacillus cereus G9241]
gi|47553692|gb|EAL12067.1| anti-repressor [Bacillus cereus G9241]
Length = 258
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I+E +Y L+ +S A++F +WV EVLP++RK G+Y
Sbjct: 72 ITEDGLYELIFESETQKAKEFRKWVTSEVLPSIRKHGAY 110
>gi|282917214|ref|ZP_06324969.1| antirepressor [Staphylococcus aureus subsp. aureus D139]
gi|282318841|gb|EFB49196.1| antirepressor [Staphylococcus aureus subsp. aureus D139]
Length = 254
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 1 MSTITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRY 55
M+ I F SN + +I+ K ++N F + VA +LG+ +N + I
Sbjct: 1 MNEIKTF---SNDMFSILIKQDNENNLFDLETVAKSLGFTQFKNGKQYIRWETINKYLGK 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L E G K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ +
Sbjct: 58 YLSQEVG--KGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATD 110
>gi|153954472|ref|YP_001395237.1| prophage antirepressor-related protein [Clostridium kluyveri DSM
555]
gi|146347353|gb|EDK33889.1| Prophage antirepressor-related protein [Clostridium kluyveri DSM
555]
Length = 294
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 38/192 (19%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + EF +KI T V D+ W +A ++ + GY I+ + A+++ + E
Sbjct: 1 MNNLIVKEFNGDKIHTFVWNDKPCW-IANEIVSMFGYVEPKVTISQCIE--AEQFEIGIE 57
Query: 61 GGIQK---------------------------VRIISEPDVYRLLVKSTLPSAQKFERWV 93
I K + I E +Y L + P +F +W+
Sbjct: 58 YEILKYNELKDFKELVKNTLTTSELINKYASSLAIFYEDGLYGFLQYTDKPIGVQFRKWI 117
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSAS-------TVLRVHKHLEELAKQAGLKDNQLLLK 146
EVLP +R+TG+Y + A S T+ + + + L AG+ DN + L
Sbjct: 118 RREVLPEIRQTGAYISDKASTEALKESNQPEKLETINKSVELVSPLLDVAGV-DNTIKLL 176
Query: 147 VNRGVTKITGVD 158
V + + GVD
Sbjct: 177 VVKTLFSKAGVD 188
>gi|289677016|ref|ZP_06497906.1| hypothetical protein PsyrpsF_27278 [Pseudomonas syringae pv.
syringae FF5]
Length = 183
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q I+SE Y ++V + +W+ EV+P LR
Sbjct: 80 AQSELIVSESGAYAMMVHHYHAENRGLRQWLTHEVVPALR 119
>gi|9964491|ref|NP_064959.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944700|gb|AAG02883.1|AF250284_177 AMV177 [Amsacta moorei entomopoxvirus 'L']
Length = 360
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 20/125 (16%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNI-------WFVAKDVAT-ALGY-ENSNEAINAHCKG 50
+ T+T F + NKI D D I WF KD+ GY + S ++I
Sbjct: 19 IDTLTDNFIYNFNKIFKFKDTDIKINGTIDQPWFCLKDIIIYGFGYTKESYKSILKELNN 78
Query: 51 VAKR--YPLKTEGGI--------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
K+ Y + EGG K ++E +Y ++ + T SA+ F++++ +E+LP+
Sbjct: 79 SYKKSLYDIIVEGGKTPPTKNNENKAIYVNESGLYYIVFQCTKDSAKDFQKYILDELLPS 138
Query: 101 LRKTG 105
+RK
Sbjct: 139 IRKLA 143
>gi|253583941|ref|ZP_04861139.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834513|gb|EES63076.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 253
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSN--------EAINAHCKGVAKRYPLKTEGGIQK 65
+R D+ ++ +DVA LG+E + +N + + ++ +++
Sbjct: 16 VRGYADEKGTVYLNLEDVARGLGFEREKNGKMYVMWDRVNKYLEELSFHTSVES------ 69
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I E Y+L +K+ A+KF+ V +E+LP++RK G Y V+
Sbjct: 70 -NFIPENVFYKLCMKANNEVARKFQDLVCDEILPSIRKNGMYVVD 113
>gi|320192280|gb|EFW66925.1| Phage Rha protein [Escherichia coli O157:H7 str. EC1212]
Length = 232
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAK 53
++ +T F K T ++ + IWF +K++A AL Y ++ N+ I+ G+++
Sbjct: 29 IAMVTQLAFRDVKF-TPINHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQ 87
Query: 54 RYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
T G +K RI S + + + + P A++F RWV +
Sbjct: 88 VVESTTSGNYRKKTRIFSLRGAHLIAMFARTPVAKEFRRWVLD 130
>gi|260853769|ref|YP_003227660.1| putative antirepressor protein [Escherichia coli O26:H11 str.
11368]
gi|257752418|dbj|BAI23920.1| putative antirepressor protein [Escherichia coli O26:H11 str.
11368]
Length = 243
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAK 53
++ +T F K T ++ + IWF +K++A AL Y ++ N+ I+ G+++
Sbjct: 40 IAMVTQLAFRDVKF-TPINHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQ 98
Query: 54 RYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
T G +K RI S + + + + P A++F RWV +
Sbjct: 99 VVESTTSGNYRKKTRIFSLRGAHLIAMFARTPVAKEFRRWVLD 141
>gi|254304004|ref|ZP_04971362.1| possible bacteriophage antirepressor [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148324196|gb|EDK89446.1| possible bacteriophage antirepressor [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 220
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
Query: 22 QNIWFVAKDVATALGY--ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+N F+A+DVA + Y E + +N P+ G ++ + ++E +Y +L+
Sbjct: 24 ENPLFLARDVAEWIEYDKEKVGQMLNTIDNDEKMTSPIYYSGQVRNMWFVTEDGLYEVLM 83
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYS---VEAPKLRATSASTVLRVHKHLEELAKQA 136
+S P A+++++ V +E+L +RKTG+Y+ A +L A A ++ + L L K
Sbjct: 84 QSRKPIAKQWKKKV-KEILKEIRKTGTYTRPLTPAEQLLA-QAQLMVDMENRLNILEKNN 141
Query: 137 GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+N L + + G ++ SS
Sbjct: 142 ARLENNLRRTITSDYFTVIGYANFRGINADTYNSS 176
>gi|309810109|ref|ZP_07703955.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 2503V10-D]
gi|329919659|ref|ZP_08276637.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 1401G]
gi|308169608|gb|EFO71655.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 2503V10-D]
gi|328937311|gb|EGG33735.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 1401G]
Length = 65
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ ISEP++Y+L+ +S P A+K WV EVLP + G Y
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKVADWVKSEVLPAIVHKGVY 42
>gi|317064525|ref|ZP_07929010.1| prophage antirepressor [Fusobacterium ulcerans ATCC 49185]
gi|313690201|gb|EFS27036.1| prophage antirepressor [Fusobacterium ulcerans ATCC 49185]
Length = 269
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRY-----PLKTEG---GIQ 64
+R +D+ + + +DVA LG+ + ++ N + K Y + T G G Q
Sbjct: 6 VRGYIDEKETAFLNLEDVAHGLGFTETAKSGNEVVRWRRVKDYLVDLRVIATGGDGQGKQ 65
Query: 65 KV-RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PKLRATSA 119
+ I E Y+L +K+ +A+KF+ V +E+LPT+RK G Y E P L A A
Sbjct: 66 SLPEFIPENIFYKLCMKANNQTARKFQDLVCDEILPTIRKNGMYVTEKLLDDPDL-AIKA 124
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK--ITGVDQL-EAMDIKHLPSSDNDEY 176
T L+ EE K+ L+ L+V + K I+ + + E MD L S+ E
Sbjct: 125 FTKLK-----EEREKRKQLESKVENLQVENEIQKQVISEFEPVKEYMDF-ILSSA---ET 175
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGL 204
+ I+QI A LNK+L ++G+
Sbjct: 176 MCISQIAADYGLSGHA--LNKILNEKGI 201
>gi|145708113|ref|YP_001165288.1| hypothetical protein RPRSA1_gp39 [Ralstonia phage phiRSA1]
gi|139003902|dbj|BAF52416.1| hypothetical phage protein [Ralstonia phage phiRSA1]
Length = 184
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP--------LKTEGGIQKVRI 68
+VD W +A+ALGY+N +I + A + L T GG Q VRI
Sbjct: 19 VVDLHNVPWLRGSQIASALGYKNHRASIAELYERNADEFTPEMTQVVELNTAGGRQPVRI 78
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFE 95
S Y L + + A+ F RWV +
Sbjct: 79 FSPRGCYLLGMLARTERAKAFRRWVLD 105
>gi|323153460|gb|EFZ39715.1| BRO family, N-terminal domain protein [Escherichia coli EPECa14]
Length = 247
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAK 53
++ +T F K T ++ + IWF +K++A AL Y ++ N+ I+ G+++
Sbjct: 44 IAMVTQLAFRDVKF-TPINHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQ 102
Query: 54 RYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
T G +K RI S + + + + P A++F RWV +
Sbjct: 103 VVESTTSGNYRKKTRIFSLRGAHLIAMFARTPVAKEFRRWVLD 145
>gi|302188611|ref|ZP_07265284.1| hypothetical protein Psyrps6_19782 [Pseudomonas syringae pv.
syringae 642]
Length = 181
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F +R I + Q WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHRRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|257470314|ref|ZP_05634405.1| BRO domain-containing protein [Fusobacterium ulcerans ATCC 49185]
Length = 272
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRY-----PLKTEG---GIQ 64
+R +D+ + + +DVA LG+ + ++ N + K Y + T G G Q
Sbjct: 9 VRGYIDEKETAFLNLEDVAHGLGFTETAKSGNEVVRWRRVKDYLVDLRVIATGGDGQGKQ 68
Query: 65 KV-RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PKLRATSA 119
+ I E Y+L +K+ +A+KF+ V +E+LPT+RK G Y E P L A A
Sbjct: 69 SLPEFIPENIFYKLCMKANNQTARKFQDLVCDEILPTIRKNGMYVTEKLLDDPDL-AIKA 127
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK--ITGVDQL-EAMDIKHLPSSDNDEY 176
T L+ EE K+ L+ L+V + K I+ + + E MD L S+ E
Sbjct: 128 FTKLK-----EEREKRKQLESKVENLQVENEIQKQVISEFEPVKEYMDF-ILSSA---ET 178
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGL 204
+ I+QI A LNK+L ++G+
Sbjct: 179 MCISQIAADYGLSGHA--LNKILNEKGI 204
>gi|227485773|ref|ZP_03916089.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
gi|227236244|gb|EEI86259.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
Length = 169
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 1 MYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGY 34
>gi|298375388|ref|ZP_06985345.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 3_1_19]
gi|298267888|gb|EFI09544.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 3_1_19]
Length = 251
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 24 IWFVAKDVATALGYENSNEA------------INAHCKGVAKRYPLKTEGGIQKVRIISE 71
I+ KDVA LG+E E I + + RY L E G+ I E
Sbjct: 26 IFLNLKDVAIGLGFERERERNGNITKTIRWDNIKKYLSEIDDRY-LTQEVGLD--LFILE 82
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
D Y L + + +A+ F + + +E+LP +RK G+Y E
Sbjct: 83 SDFYELAMVAKSETAKAFRKKIAKEILPAIRKHGAYISE 121
>gi|134287197|ref|YP_001110893.1| Bro3 [Heliothis virescens ascovirus 3e]
gi|133722105|gb|ABO37227.1| Bro3 [Heliothis virescens ascovirus 3e]
Length = 346
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 3 TITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKRYP 56
+IT +F ++ T VD + W VA A ALGY + AI K +
Sbjct: 2 SITKIKFGDKEVDTYNVDFNGEKWMVANPFAEALGYSIPHIAIAKFVTMKNQKSYEEIKS 61
Query: 57 LKTEG---------GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
++T IQ K + I+ V+ L+ S +P A++F+ W ++LP L + G
Sbjct: 62 IRTASTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPGLCQEGE 121
Query: 107 YSV--EAP 112
Y + +AP
Sbjct: 122 YKMVRDAP 129
>gi|255652572|ref|ZP_05399474.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 276
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV--AKRYPLKTEGGIQ----KVR 67
+RTI +D +I A+D A G+ + K V + E G K
Sbjct: 19 VRTISYEDGSIGINAEDTAIGFGWCKIEKKGEKEYKSVRWKRMNEFSKEFGFDHLWSKDD 78
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
ISE Y L +K+ +A KF++W+ +++PT+RK G+Y
Sbjct: 79 YISESLFYMLGMKAKNEAAVKFQKWLAIDIIPTIRKHGAY 118
>gi|317120688|gb|ADV02511.1| hypothetical protein SC1_gp155 [Liberibacter phage SC1]
gi|317120730|gb|ADV02552.1| hypothetical protein SC2_gp155 [Liberibacter phage SC2]
gi|317120791|gb|ADV02612.1| hypothetical protein SC2_gp155 [Liberibacter phage SC2]
gi|317120832|gb|ADV02653.1| hypothetical protein SC1_gp155 [Liberibacter phage SC1]
Length = 61
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/23 (82%), Positives = 19/23 (82%)
Query: 45 NAHCKGVAKRYPLKTEGGIQKVR 67
NAHCKG KR LKTEGGIQKVR
Sbjct: 9 NAHCKGALKRGTLKTEGGIQKVR 31
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/19 (89%), Positives = 18/19 (94%)
Query: 49 KGVAKRYPLKTEGGIQKVR 67
KGVAK +PLKTEGGIQKVR
Sbjct: 33 KGVAKHHPLKTEGGIQKVR 51
>gi|85715440|ref|ZP_01046421.1| hypothetical protein NB311A_17084 [Nitrobacter sp. Nb-311A]
gi|85697635|gb|EAQ35511.1| hypothetical protein NB311A_17084 [Nitrobacter sp. Nb-311A]
Length = 187
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+++ S P A++F++W+ EVLP++RKTG Y + P
Sbjct: 1 MILTSRKPEAKRFKKWITSEVLPSIRKTGGYGGKVPAF 38
>gi|330942408|gb|EGH45019.1| hypothetical protein PSYPI_22792 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 191
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 20 CTPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHG 78
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W+ EV+P LR
Sbjct: 79 EAQPELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 119
>gi|167622084|ref|YP_001672378.1| hypothetical protein Shal_0143 [Shewanella halifaxensis HAW-EB4]
gi|167352106|gb|ABZ74719.1| hypothetical protein Shal_0143 [Shewanella halifaxensis HAW-EB4]
Length = 260
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
G++ +++P + R++ P+ +KF+RW++ +V+P+L K G Y
Sbjct: 82 GLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPSLTKHGVY 127
>gi|157159777|ref|YP_001457095.1| hypothetical protein EcHS_A0323 [Escherichia coli HS]
gi|157065457|gb|ABV04712.1| putative phage protein [Escherichia coli HS]
Length = 208
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENS-------NEAINAHCKGVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS N+ + G+
Sbjct: 1 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 60
Query: 53 KRYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + P A++F RWV +
Sbjct: 61 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 104
>gi|99078519|ref|YP_611777.1| BRO-like [Ruegeria sp. TM1040]
gi|99078525|ref|YP_611783.1| BRO-like [Ruegeria sp. TM1040]
gi|99035657|gb|ABF62515.1| BRO-like protein [Ruegeria sp. TM1040]
gi|99035663|gb|ABF62521.1| Hypothetical 378 kDa protein in PTP-CTL intergenic region [Ruegeria
sp. TM1040]
Length = 191
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR---IISEP 72
+++ WF+A +V ALG N+ + ++ + ++ G+ + +ISE
Sbjct: 16 SVISIGDQAWFLADEVYAALGLFLRNDPQTLVLQQ-SEWSVMSSQSGVTNAQTPVVISEA 74
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
VY+L S P ++F+ W +LPT+ G Y + ++ +T V
Sbjct: 75 GVYKLAFLSEEPEVREFQDWAMNTLLPTIIHDGFYMMGEEEMFSTPECDV 124
>gi|51102963|gb|AAT96111.1| Pspto3096-like protein [Pseudomonas viridiflava]
Length = 176
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQK 65
F +++ + WF D+A +G E + ++A + V L+ G ++
Sbjct: 20 FRHHRMLRAAVSEAQAWFCLADLARLMGKALDERATLKLDADQRRVVW---LQANGEWRR 76
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++SE V+ LLV +P + +W+ EVL LR + +++ PK+
Sbjct: 77 QLMVSESGVFALLVHHYVPENRALRQWLTHEVLTVLRDQHNVTLDNPKV 125
>gi|66046954|ref|YP_236795.1| hypothetical protein Psyr_3726 [Pseudomonas syringae pv. syringae
B728a]
gi|63257661|gb|AAY38757.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 191
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ +DQ WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLEDQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ ++SE Y ++V + +W+ EV+P LR
Sbjct: 80 ARSELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 119
>gi|117530180|ref|YP_851023.1| prophage antirepressor [Microcystis phage Ma-LMM01]
gi|117165792|dbj|BAF36100.1| prophage antirepressor [Microcystis phage Ma-LMM01]
Length = 162
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYPLKT 59
M I + F S +R I+ K + WFV D+ LG N+ EA+N C + +
Sbjct: 1 MPNIRTYIFNSTVVRVII-KCKQPWFVKDDILNVLGLRNT-EALNTKECDT----FTIND 54
Query: 60 EGGIQKVRIISEPDVYRLL 78
G + + +IS P VYRL+
Sbjct: 55 TNGARDIPVISLPAVYRLI 73
>gi|300922790|ref|ZP_07138877.1| hypothetical protein HMPREF9548_01023 [Escherichia coli MS 182-1]
gi|300420894|gb|EFK04205.1| hypothetical protein HMPREF9548_01023 [Escherichia coli MS 182-1]
Length = 236
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENS-------NEAINAHCKGVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS N+ + G+
Sbjct: 29 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 88
Query: 53 KRYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + P A++F RWV +
Sbjct: 89 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 132
>gi|325840440|ref|ZP_08167039.1| phage antirepressor protein [Turicibacter sp. HGF1]
gi|325490307|gb|EGC92636.1| phage antirepressor protein [Turicibacter sp. HGF1]
Length = 268
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLK----TEGGIQKVRIISEPDVYRLLVKS 81
F+AKDVA + Y+ S ++N K V + EG +++ ++E VY +L++S
Sbjct: 37 FLAKDVAEWIAYDTS--SLNKMLKNVEDEEKVNGIIFREGQHREMWFLTEDGVYEVLMQS 94
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLRVHKHLEELAKQAG 137
P A+ F++ V +E+L +R+ G Y+ ++ P L AS + K E+ KQ
Sbjct: 95 RKPIAKAFKKKV-KEILKEIRQHGMYARDELLDNPDLLIQVASKL----KEEREMRKQLE 149
Query: 138 LK 139
+K
Sbjct: 150 IK 151
>gi|301381174|ref|ZP_07229592.1| hypothetical protein PsyrptM_00998 [Pseudomonas syringae pv. tomato
Max13]
gi|302058559|ref|ZP_07250100.1| hypothetical protein PsyrptK_01123 [Pseudomonas syringae pv. tomato
K40]
gi|302132587|ref|ZP_07258577.1| hypothetical protein PsyrptN_14410 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 181
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIF-TDAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE LLV +P ++ +W+ EVL L + ++ P++
Sbjct: 76 RQLMISESGTLALLVHHYVPESRALRQWLTHEVLTVLHDQQNVILDNPRM 125
>gi|21222224|ref|NP_628003.1| DNA-binding protein [Streptomyces coelicolor A3(2)]
gi|5457249|emb|CAB46937.1| putative DNA-binding protein [Streptomyces coelicolor A3(2)]
Length = 325
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTEGGIQ 64
++R + + WF A DV LGY + +A+ H + V + L G +
Sbjct: 30 RVRRLTMPGGSHWFPAADVCKELGYTTTRKALLDHVPEEHRDSLETVTGSHSLSIPAGRK 89
Query: 65 KVRIISEPDVYRLLV---KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
R + D+ L++ T P+ F++WV EV+ T+++ GSYS++ +++ T
Sbjct: 90 WRRDLQLIDLQGLILLVNACTKPACAPFKQWV-AEVVETVQREGSYSLDEAEVQPT 144
>gi|302184866|ref|ZP_07261539.1| hypothetical protein Psyrps6_00942 [Pseudomonas syringae pv.
syringae 642]
Length = 194
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 24 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHQMITLDLHGE 82
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W+ EV+P LR
Sbjct: 83 AQSELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 122
>gi|298487936|ref|ZP_07005975.1| Prophage antirepressor [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298157487|gb|EFH98568.1| Prophage antirepressor [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 191
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W+ EV+P LR
Sbjct: 80 AQPELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|281491981|ref|YP_003353961.1| phage antirepressor [Lactococcus lactis subsp. lactis KF147]
gi|281375690|gb|ADA65194.1| Phage protein, antirepressor [Lactococcus lactis subsp. lactis
KF147]
Length = 258
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
+N F+AKD+A + + ++E + P+ G + + ++E +Y +L+ S
Sbjct: 19 ENPLFLAKDIAELIEHSRASEMLKTVDDDEKLMQPILASGQNRNMWFLTEDGLYEVLMSS 78
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSY 107
P A+ F++ V +E+L T+RK G+Y
Sbjct: 79 KKPQAKIFKKKV-KEILKTIRKHGAY 103
>gi|319776467|ref|YP_004138955.1| phage antirepressor protein [Haemophilus influenzae F3047]
gi|317451058|emb|CBY87291.1| Phage antirepressor protein [Haemophilus influenzae F3047]
Length = 284
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------------PLKTEGGI 63
++++++ IW ++ ALGY + +++ K + R+ + T GG+
Sbjct: 13 SVINQNNQIWLTVTEIGKALGYSDPFKSV----KNIYDRHRDEFTEKMTALIDMPTAGGL 68
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRATSAST 121
QKVRI S + + + + A+ F +WV + + ++K+ + + P+ + S
Sbjct: 69 QKVRIFSLRGAHLIAMFARTKIAKAFRKWVLDVLDEEVKKSTALLPNTITPEQQQAIQSA 128
Query: 122 VLRVHK----HLEELAKQ 135
V + H H +E+ +Q
Sbjct: 129 VQQAHHRTGLHWQEIYRQ 146
>gi|326203495|ref|ZP_08193359.1| BRO domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986315|gb|EGD47147.1| BRO domain protein [Clostridium papyrosolvens DSM 2782]
Length = 251
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAK------ 53
M I F S + D++ +WF + + AL Y AI N H + +
Sbjct: 1 MQLIKSESFGSVQCDVWKDENGEMWFTREQIGQALEYGTPRIAIANIHERNADRIDKFSA 60
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
L T GIQ+ I S + + S P A F WV+ EV+ ++RK G Y+
Sbjct: 61 VVKLSTPSGIQETYIYSHKGLNEICRFSRQPKADAFMDWVW-EVIESIRKHGMYA 114
>gi|261494509|ref|ZP_05990995.1| putative prophage antirepressor [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261309893|gb|EEY11110.1| putative prophage antirepressor [Mannheimia haemolytica serotype
A2 str. OVINE]
Length = 280
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVAKRY 55
+T F+ N +++D++ W A +V ALGY + + I + +
Sbjct: 1 MTTLTFQ-NTTLSVIDQNNQKWIPALEVGRALGYADPSANISKLYERNKDEFTPSMTAII 59
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ T G+QKVRI S + L ++S A+ F +WV +
Sbjct: 60 DMDTASGMQKVRIFSLRGCWLLGMRSHTKVAKDFRKWVLD 99
>gi|209363560|ref|YP_002267978.1| anti-repressor [Staphylococcus phage phi2958PVL]
gi|257428265|ref|ZP_05604663.1| anti-repressor [Staphylococcus aureus subsp. aureus 65-1322]
gi|208973061|dbj|BAG74377.1| anti-repressor [Staphylococcus phage phi2958PVL]
gi|257275106|gb|EEV06593.1| anti-repressor [Staphylococcus aureus subsp. aureus 65-1322]
Length = 54
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK 49
M + F FE +RT+ D +FV KDVA LGY N+ +A++ H +
Sbjct: 1 MQALQTFNFEELPVRTLT-VDNEPYFVGKDVAEILGYSNTRDALSKHAE 48
>gi|257485939|ref|ZP_05639980.1| hypothetical protein PsyrptA_21901 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331010337|gb|EGH90393.1| hypothetical protein PSYTB_11708 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 191
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W+ EV+P LR
Sbjct: 80 AQPELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|330981850|gb|EGH79953.1| BRO domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 143
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 23 NIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
WF +D+A +G E S +++ + L + G QK +IS+ +Y LLV
Sbjct: 34 QCWFSLQDMARLMGKALDERSTRKLDS---DQHRHVWLHSHGEWQKCLMISDSGIYALLV 90
Query: 80 KSTLPSAQKFERWVFEEVLPTL 101
+P + W+ EV+PTL
Sbjct: 91 HHYVPENRALRLWLSSEVIPTL 112
>gi|289627790|ref|ZP_06460744.1| hypothetical protein PsyrpaN_22089 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|330867315|gb|EGH02024.1| hypothetical protein PSYAE_08657 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 170
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIF-TDAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE LLV +P + +W+ EVL L S +++ P++
Sbjct: 76 RQLMISESGGLALLVHHYVPENRALRQWLTHEVLTVLHDQQSVTLDNPRM 125
>gi|257451497|ref|ZP_05616796.1| putative antirepressor [Fusobacterium sp. 3_1_5R]
gi|317058077|ref|ZP_07922562.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683753|gb|EFS20588.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 253
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-VRIISEPDVYRLLVK 80
+N F+AKDVA + + NE I A+ K + + G + + ++E +Y +L+
Sbjct: 24 ENPLFLAKDVAEWIEHNKPNELI-ANVDDTEKLKAIISHSGQNREMWFLTEDGLYEVLML 82
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
S P A++F++ V +++L T+RK G Y V+
Sbjct: 83 SRKPIAKEFKKEV-KKILKTIRKNGMYVVD 111
>gi|327198731|emb|CCA61432.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 431
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 22/106 (20%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG-------GIQKVRI--------- 68
+F KD+ L Y + +A+ + K+ PL G +R+
Sbjct: 35 YFCGKDICNILQYNDIKQALQNNVYDEDKK-PLSALGVCGTPNPNSSAIRLGSYSGAYHE 93
Query: 69 -----ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
++E +Y L++ S P A++F+R+V +LP++RK G +SV
Sbjct: 94 GRAVYVNEAGLYSLVLTSKAPFAREFKRYVCSVILPSIRKFGQFSV 139
>gi|134287199|ref|YP_001110895.1| Bro5 [Heliothis virescens ascovirus 3e]
gi|133722107|gb|ABO37229.1| Bro5 [Heliothis virescens ascovirus 3e]
Length = 354
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------RYP-----LKTEG 61
+I ++ D +W +A A L Y N+ AI + + P T
Sbjct: 17 EIISVKDDAGKLWMLANPFARILEYSNAPNAITKFVSNSNQINYESIKSPRCGETCMTSS 76
Query: 62 GIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAP 112
+Q K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y + +AP
Sbjct: 77 CVQAKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMATDAP 130
>gi|289770575|ref|ZP_06529953.1| DNA-binding protein [Streptomyces lividans TK24]
gi|289700774|gb|EFD68203.1| DNA-binding protein [Streptomyces lividans TK24]
Length = 325
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTEGGIQ 64
++R + + WF A DV LGY + +A+ H + V + L G +
Sbjct: 30 RVRRLTMPGGSHWFPAADVCKELGYTTTRKALLDHVPEEHRDSLETVTGSHSLSIPAGRK 89
Query: 65 KVRIISEPDVYRLLV---KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R + D+ L++ T P+ F++WV EV+ T+++ GSYS++
Sbjct: 90 WRRDLQLIDLQGLILLVNACTKPACAPFKQWV-AEVVETVQREGSYSLD 137
>gi|213970390|ref|ZP_03398519.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213924861|gb|EEB58427.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 214
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 50 TLFLRHSRMLRAIF-TDAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 108
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE LLV +P ++ +W+ EVL L + ++ P++
Sbjct: 109 RQLMISESGTLALLVHHYVPESRALRQWLTHEVLTVLHDQQNVILDNPRM 158
>gi|13160526|gb|AAK13283.1| unknown [Culex nigripalpus NPV]
Length = 410
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 23/108 (21%)
Query: 25 WFVAKDVATALGYE---NSNEAINAHCK-------------GVAKRYPLKTEGGI----- 63
W VA D+A LGYE ++ I A K G + + EG
Sbjct: 167 WVVAADLARCLGYEKYRQTHTRILAAFKRKLSDLVHTEPFSGTVESEVARLEGAPVELSS 226
Query: 64 --QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + +++E ++++L+ S LP+ QK++ VF ++LP R G +
Sbjct: 227 RERDIVVVNEGGIHQMLIGSRLPNVQKYKELVFGKILPAARARGELQI 274
>gi|15320799|ref|NP_203309.1| CUN005 putative bro protein, similar to AcMNPV ORF2 [Culex
nigripalpus NPV]
gi|15278261|gb|AAK94083.1|AF403738_5 CUN005 putative bro protein, similar to AcMNPV ORF2 [Culex
nigripalpus NPV]
Length = 580
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 25 WFVAKDVATALGYEN--------------------SNEAINAHCKGVAKRY---PLKTEG 61
W VA D+A LGYE E + + R P++
Sbjct: 167 WVVAADLARCLGYEKYRQTHTRILAAFKRKLSDLVHTEPFSGTVESEVARLEGAPVELSS 226
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + +++E ++++L+ S LP+ QK++ VF ++LP R G +
Sbjct: 227 RERDIVVVNEGGIHQMLIGSRLPNVQKYKELVFGKILPAARARGELQI 274
>gi|77460517|ref|YP_350024.1| BRO-like [Pseudomonas fluorescens Pf0-1]
gi|77384520|gb|ABA76033.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 176
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
WF A+DV +G+ +N K + ++ +K ++SE VY LLV +P
Sbjct: 27 WFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIEYFRQPEKQLMLSESGVYALLVYHYVP 86
Query: 85 SAQKFERWVFEEVLPTLR 102
+ W+ +V+P LR
Sbjct: 87 GNRLLREWLTLQVVPALR 104
>gi|266620995|ref|ZP_06113930.1| KilA protein, putative phage-related DNA binding protein
[Clostridium hathewayi DSM 13479]
gi|323485187|ref|ZP_08090538.1| hypothetical protein HMPREF9474_02289 [Clostridium symbiosum
WAL-14163]
gi|288867311|gb|EFC99609.1| KilA protein, putative phage-related DNA binding protein
[Clostridium hathewayi DSM 13479]
gi|323401506|gb|EGA93853.1| hypothetical protein HMPREF9474_02289 [Clostridium symbiosum
WAL-14163]
Length = 157
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 26 FVAKDVATALGYENSNE-AINAHCKGVAK-RYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
F AKD++ A+GY + NE + C+ K + PL G + V ++E +Y +L +S +
Sbjct: 29 FKAKDISHAIGYSSGNEWRMLEMCEEDEKLKLPLVVAGQRRSVNFVTENGLYNILAQSRM 88
Query: 84 PSAQKFERWVFEEVLPTLRKTG 105
A+ + R V +E++ ++ G
Sbjct: 89 EIARSWRRVVHDELINMRKEKG 110
>gi|107101872|ref|ZP_01365790.1| hypothetical protein PaerPA_01002917 [Pseudomonas aeruginosa PACS2]
Length = 170
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 5 TQLAPHYFFRQQRLLRALLIDDQ-AWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 63
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 64 ERGEDQAQWLISESGAYAALIYQQRGDGSELRRWLSGEVVPELRSA 109
>gi|330882505|gb|EGH16654.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 139
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
L T G QK +ISE V+ LL+ +P + RW+ ++VLP L
Sbjct: 28 LLTHGEWQKCLLISESAVFALLIHHYIPENRALRRWLTQDVLPAL 72
>gi|330889636|gb|EGH22297.1| hypothetical protein PSYMO_12652 [Pseudomonas syringae pv. mori
str. 301020]
Length = 157
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
D WF D+A +G A + L+ G Q+ +ISE V LLV
Sbjct: 8 DAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQRQLMISESGVLALLVH 67
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+P + +W+ EVL L + +++ P++
Sbjct: 68 HYVPENRALRQWLTHEVLTVLHDQQNVTLDNPRM 101
>gi|28868858|ref|NP_791477.1| hypothetical protein PSPTO_1652 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852097|gb|AAO55172.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 191
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF+ + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFQRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDTDQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ ++SE Y ++V + +W+ EV+P LR
Sbjct: 80 AEPELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|51102945|gb|AAT96094.1| Pspto3096-like protein [Pseudomonas viridiflava]
Length = 175
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPLKTEGGIQK 65
F +++ + WF D+A +G E + ++A + V L+ G +
Sbjct: 20 FRHHRMLRAAVSEAQAWFCLADLARLMGKALDERATLKLDADQRRVVW---LQANGEWCR 76
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
++SE V+ LLV +P + +W+ EVL LR + +++ PK+
Sbjct: 77 QLMVSESGVFALLVHHYVPENRALRQWLTHEVLTVLRDQHNVTLDNPKV 125
>gi|116326713|ref|YP_803250.1| hypothetical protein TNAV2c_gp027 [Trichoplusia ni ascovirus 2c]
gi|102231721|gb|ABF70544.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 258
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRY--------PLKTEGGIQKV------RIIS 70
WF+A +L Y N AI H +R+ P + E R I+
Sbjct: 25 WFLANPFGESLKYVNLPNAIAKHVTKKNQRFLYQLMHPPPREEEDDSSPFTIKYNSRFIN 84
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPK 113
+ ++ L+ S + AQ+F W +V+P L G Y++ +AP+
Sbjct: 85 KAGIWELIQNSPMKEAQEFRDWQNSDVMPKLCDVGEYNMLRDAPR 129
>gi|9635380|ref|NP_059278.1| ORF130 [Xestia c-nigrum granulovirus]
gi|6175774|gb|AAF05244.1|AF162221_130 ORF130 [Xestia c-nigrum granulovirus]
Length = 237
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 20/95 (21%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI----------------I 69
+ VA +LGY+ A+ H K + KT I+K+ I
Sbjct: 6 YTGHGVAESLGYKCPRRALYDHVKPQWR----KTWAEIKKLTFFNEALLPSNWQPNTVFI 61
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+E VY L+ KS L A+ F W+F+ ++P +R+
Sbjct: 62 TEAGVYALINKSKLAGAEIFREWLFDTIIPQMRRA 96
>gi|292397743|ref|YP_003517809.1| BRO-E [Lymantria xylina MNPV]
gi|291065460|gb|ADD73778.1| BRO-E [Lymantria xylina MNPV]
Length = 196
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAI------------NAHCKGVAKR----YPLKTE 60
IV D ++ K++A LGY + + N + V+KR P T
Sbjct: 71 IVMPDGSVAVKLKELALFLGYADVKMSYKLIPEEWKITWKNLQNELVSKRRQLVAPSTTP 130
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q ++ + EP VY L+ +S P A++ V+E +LPT+RKTG +
Sbjct: 131 ANWQPEILFVLEPGVYALMARSNKPMAKEKMNHVYETILPTIRKTGKF 178
>gi|228961479|ref|ZP_04123090.1| hypothetical protein bthur0005_49220 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798193|gb|EEM45195.1| hypothetical protein bthur0005_49220 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 281
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+L TQIGER+ RA +N LL +RGLQ KV+ +R T +G++ G +M P
Sbjct: 209 FLNPTQIGERIGKKSRA--VNTLLQERGLQ-EKVNKEWRLTDEGKKFGEEM---PYTRNG 262
Query: 236 GSTQQLKWNSNLLVSFLQNE 255
S Q++W S +V L+ E
Sbjct: 263 HSGYQIRW-SGSVVDVLERE 281
>gi|262403516|ref|ZP_06080074.1| prophage antirepressor [Vibrio sp. RC586]
gi|262350020|gb|EEY99155.1| prophage antirepressor [Vibrio sp. RC586]
Length = 265
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
I++P + RL+ + +KF+RW++ EV+P+L+K G Y
Sbjct: 90 FITQPGLNRLMGSDKSKAGKKFQRWLYHEVVPSLQKFGIY 129
>gi|259501437|ref|ZP_05744339.1| bro family toxin-antitoxin system [Lactobacillus iners DSM 13335]
gi|302190841|ref|ZP_07267095.1| putative antirepressor - phage associated protein [Lactobacillus
iners AB-1]
gi|309803442|ref|ZP_07697536.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 11V1-d]
gi|312870903|ref|ZP_07731008.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 3008A-a]
gi|312872247|ref|ZP_07732320.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2062A-h1]
gi|325913373|ref|ZP_08175740.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 60-B]
gi|259167186|gb|EEW51681.1| bro family toxin-antitoxin system [Lactobacillus iners DSM 13335]
gi|308164451|gb|EFO66704.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 11V1-d]
gi|311092331|gb|EFQ50702.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2062A-h1]
gi|311093593|gb|EFQ51932.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 3008A-a]
gi|325477299|gb|EGC80444.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 60-B]
Length = 44
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
SEP++Y+L+ +S P A+KF WV EVLP +
Sbjct: 5 SEPNLYKLIFQSRKPEAEKFADWVKSEVLPAI 36
>gi|218891597|ref|YP_002440464.1| hypothetical protein PLES_28731 [Pseudomonas aeruginosa LESB58]
gi|218771823|emb|CAW27600.1| hypothetical [Pseudomonas aeruginosa LESB58]
Length = 264
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
+ F ++ + D WFV D A + + + + A+R L++E G +
Sbjct: 105 YFFRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQA 164
Query: 67 R-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ +ISE Y L+ + RW+ EV+P LR
Sbjct: 165 QWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 203
>gi|330971155|gb|EGH71221.1| hypothetical protein PSYAR_11704 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 176
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 6 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ ++SE Y ++V + +W+ EV+P LR
Sbjct: 65 ARSELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 104
>gi|20070002|ref|NP_613206.1| BRO-g [Mamestra configurata NPV-A]
gi|20043396|gb|AAM09231.1| BRO-g [Mamestra configurata NPV-A]
Length = 235
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 25 WFVAKDVATALGYEN---SNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD-------- 73
WF AK+ A +GY+ + E +N + K + V ++ P
Sbjct: 32 WFAAKEFARCMGYDKPQAAFEKVNIDYRRKYKELIQPCDIDANNVEFVTHPHTVSVNKAG 91
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ +++ K L +A K ++W++EEV P + GS+ +A
Sbjct: 92 LVQMITKCKLKNADKLQKWLYEEVFPKI--DGSFIEDA 127
>gi|256368719|ref|YP_003106225.1| hypothetical protein BMI_I263 [Brucella microti CCM 4915]
gi|261751614|ref|ZP_05995323.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|255998877|gb|ACU47276.1| hypothetical protein BMI_I263 [Brucella microti CCM 4915]
gi|261741367|gb|EEY29293.1| predicted protein [Brucella suis bv. 5 str. 513]
Length = 106
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 19 DKDQNIWFVAKDVATALG---------YENSNEAINAHCKGVAKRYPLKT--EGGIQKVR 67
D ++ WFVA D+ L + E K + +Y L E + V
Sbjct: 4 DGERTSWFVAVDLYDILFGLRTGISTRWFLKREETKTLRKAESAQYALSNLFEAKARLVS 63
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ISE +Y+L++KS AQKF+ W+ +V+P
Sbjct: 64 LISEAGLYKLILKSRKKEAQKFQNWLARDVIP 95
>gi|296389168|ref|ZP_06878643.1| hypothetical protein PaerPAb_13511 [Pseudomonas aeruginosa PAb1]
Length = 170
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 5 TQLAPHYFFRQQRLLRALLIDDQ-AWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 63
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 64 ERGEDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 109
>gi|116326823|ref|YP_803360.1| hypothetical protein TNAV2c_gp137 [Trichoplusia ni ascovirus 2c]
gi|102231831|gb|ABF70654.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 317
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTV 122
K + I+ V+ L+ S +P A++F+ W ++LP L + G Y++ +APK A + V
Sbjct: 80 KTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPALCQEGEYNMRRDAPKAIADGMNVV 139
>gi|33331834|gb|AAQ11142.1| BRO-G [Mamestra configurata NPV-A]
Length = 235
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 25 WFVAKDVATALGYEN---SNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD-------- 73
WF AK+ A +GY+ + E +N + K + V ++ P
Sbjct: 32 WFAAKEFARCMGYDKPQAAFEKVNIDYRRKYKELIQPCDIDANNVEFVTHPHTVFVNKAG 91
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ +++ K L +A K ++W++EEV P + GS+ +A
Sbjct: 92 LVQMITKCKLKNADKLQKWLYEEVFPKI--DGSFIEDA 127
>gi|313110667|ref|ZP_07796535.1| hypothetical protein PA39016_002590002 [Pseudomonas aeruginosa
39016]
gi|310883037|gb|EFQ41631.1| hypothetical protein PA39016_002590002 [Pseudomonas aeruginosa
39016]
Length = 170
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 5 TQLAPHYFFRQQRLLRALLIDDQ-AWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 63
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 64 ERGEDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 109
>gi|49082956|gb|AAT50878.1| PA2423 [synthetic construct]
Length = 265
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 99 TQLAPHYFFRQQRLLRALLIDDQA-WFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 157
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 158 ERGEDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 203
>gi|15597619|ref|NP_251113.1| hypothetical protein PA2423 [Pseudomonas aeruginosa PAO1]
gi|9948468|gb|AAG05811.1|AE004669_8 hypothetical protein PA2423 [Pseudomonas aeruginosa PAO1]
Length = 264
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 99 TQLAPHYFFRQQRLLRALLIDDQA-WFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 157
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 158 ERGEDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 203
>gi|18309125|ref|NP_561059.1| hypothetical protein CPE0143 [Clostridium perfringens str. 13]
gi|18143800|dbj|BAB79849.1| phage-related hypothetical protein [Clostridium perfringens str.
13]
Length = 119
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K+ I E +Y + S LP F +W+ EVLP LR G+YS+
Sbjct: 14 KLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGTYSI 58
>gi|213969534|ref|ZP_03397670.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301384788|ref|ZP_07233206.1| hypothetical protein PsyrptM_19227 [Pseudomonas syringae pv. tomato
Max13]
gi|302061411|ref|ZP_07252952.1| hypothetical protein PsyrptK_15600 [Pseudomonas syringae pv. tomato
K40]
gi|213925630|gb|EEB59189.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 191
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLNGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ ++SE Y ++V + +W+ EV+P LR
Sbjct: 80 AEPELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|182676847|ref|YP_001830994.1| prophage antirepressor [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636477|gb|ACB97250.1| prophage antirepressor [Beijerinckia indica subsp. indica ATCC
9039]
Length = 120
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F F+ IRT + K+ WF+A D AL + EA + T GG Q
Sbjct: 20 FYFKDALIRTFL-KNSEPWFIASDACAALSHTKPTEATEKLYEIEKDVATYHTPGGPQAG 78
Query: 67 RIISEPDVYRLLVKSTLPSAQKF 89
+ISE +Y+L++ + A+ F
Sbjct: 79 LVISESGLYKLIMTARTEGAKIF 101
>gi|240948754|ref|ZP_04753126.1| possible prophage antirepressor [Actinobacillus minor NM305]
gi|240296970|gb|EER47548.1| possible prophage antirepressor [Actinobacillus minor NM305]
Length = 209
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVA 52
M+T+T F+ N ++++K+ + + A D+ TAL Y + +AI + +
Sbjct: 1 MTTLT---FQ-NTTLSVINKNNHTFLTASDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L+T GG Q+VR+ S + + + + A+ F +WV +
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD 99
>gi|254240859|ref|ZP_04934181.1| hypothetical protein PA2G_01533 [Pseudomonas aeruginosa 2192]
gi|126194237|gb|EAZ58300.1| hypothetical protein PA2G_01533 [Pseudomonas aeruginosa 2192]
Length = 240
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
+ + P F + +R ++ DQ WFV D A + + + + A+R L++
Sbjct: 75 TQLAPHYFFRQQRLLRALLIDDQA-WFVLDDFARLIEHSQPEQMLARLDDDQARRESLRS 133
Query: 60 EGGIQKVR-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E G + + +ISE Y L+ + RW+ EV+P LR
Sbjct: 134 ERGEDQAQWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 179
>gi|116050370|ref|YP_790813.1| hypothetical protein PA14_33290 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585591|gb|ABJ11606.1| hypothetical protein PA14_33290 [Pseudomonas aeruginosa UCBPP-PA14]
Length = 251
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
+ F ++ + D WFV D A + + + + A+R L++E G +
Sbjct: 92 YFFRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQA 151
Query: 67 R-IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ +ISE Y L+ + RW+ EV+P LR
Sbjct: 152 QWLISESGAYAALIYQQRGDGGELRRWLSGEVVPELRSA 190
>gi|9631535|ref|NP_048094.1| ORF MSV023 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049888|gb|AAC97848.1| ORF MSV023 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 365
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
++ AKD+A L Y++ + I + K K + E I ++ +Y ++ KS
Sbjct: 17 YYKAKDIADILNYKSVDYFIKKYVKNEHK---INYESTI----YVNNSGLYYIMFKSKKH 69
Query: 85 SAQKFERWVFEEVLPTL 101
A+KF+ W+ EE LP +
Sbjct: 70 EAEKFQNWIKEENLPEI 86
>gi|300312121|ref|YP_003776213.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
gi|300074906|gb|ADJ64305.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
Length = 48
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI 44
PF FE IR + + FV KD+ AL Y N N+A+
Sbjct: 5 PFHFEGRDIRVLASESSEPLFVGKDICEALDYSNPNDAM 43
>gi|28870270|ref|NP_792889.1| hypothetical protein PSPTO_3096 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28853517|gb|AAO56584.1| conserved domain protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 214
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 50 TLFLRHSRMLRAIF-TDAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 108
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE LLV +P + +W+ EVL L + ++ P++
Sbjct: 109 RQLMISESGTLALLVHHYVPENRALRQWLTHEVLTVLHDQQNVILDNPRM 158
>gi|330891679|gb|EGH24340.1| hypothetical protein PSYMO_23928 [Pseudomonas syringae pv. mori
str. 301020]
Length = 184
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 14 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 72
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W EV+P LR
Sbjct: 73 AQSELMVSESGAYAMMVHHYHAENRGLRQWDTNEVVPALR 112
>gi|253682965|ref|ZP_04863752.1| prophage pi1 protein 08 [Clostridium phage D-1873]
gi|253560891|gb|EES90353.1| prophage pi1 protein 08 [Clostridium phage D-1873]
Length = 256
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE-APKLRATSASTVLRVH 126
I E VY L++ A KF++W+ +V+P++RK G Y E + T T++++
Sbjct: 73 FIPESAVYLLIMNGENDYAVKFQQWLAVDVIPSIRKHGVYMAENVIEEILTDPDTIIKLA 132
Query: 127 KHLEELAKQAGLKDNQL 143
+L+E ++ L + QL
Sbjct: 133 TNLKEERQKRKLVEKQL 149
>gi|253990594|ref|YP_003041950.1| hypothetical protein PAU_03120 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253991057|ref|YP_003042413.1| hypothetical protein PAU_03583 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782044|emb|CAQ85208.1| putative phage protein [Photorhabdus asymbiotica]
gi|253782507|emb|CAQ85671.1| putative phage protein [Photorhabdus asymbiotica]
Length = 194
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 14/107 (13%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F+++ + + D IWF +K VAT L Y + N + + P TE +
Sbjct: 3 TSLTFKNHTVVPFDNGDGKIWFTSKQVATLLDYSKTKSVTNLYNVNSDEFTPAMTEVITR 62
Query: 65 --------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
KVRI S +Y L + + P A+ +WV + +
Sbjct: 63 VTSKESDTYSNLKTKVRIFSLRGLYLLGMLADTPVAKDLRKWVLDLI 109
>gi|22549523|ref|NP_689296.1| BRO-F [Mamestra configurata NPV-B]
gi|22476702|gb|AAM95108.1| BRO-F [Mamestra configurata NPV-B]
Length = 229
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 14 IRTIVDKDQ-NIWFVAKDVATALGYENSNEAINAHCKGVAKR------YPLKTEGGIQKV 66
I+ +DKD+ WF A + A +GY+ + I + ++ L T V
Sbjct: 20 IKENLDKDKVQFWFAASEFARCMGYQRPDNIILQKIDLIYRKKFEEFNILLHTSTHPHTV 79
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+++ + +++ K L +A K ++W++EEV P + GS+ +A
Sbjct: 80 -FVNKAGLVQMITKCKLKNADKLQKWLYEEVFPKI--DGSFIEDA 121
>gi|208429878|ref|YP_002265431.1| antirepressor [Clostridium phage 39-O]
gi|190683361|gb|ACE82005.1| antirepressor [Clostridium phage 39-O]
gi|327492222|gb|AEA86243.1| prophage antirepressor [Clostridium phage CP26F]
Length = 223
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINA---------HCKGVAKRYPLKTEGGI--QK 65
I+ ++ IWF A+D+ L +N +A+ + V + Y E + +
Sbjct: 12 IIQTEEEIWFSAEDLGELLEIKNIRDAVRKIEEEDKMKFNNSNVEETYIRNFESKLPNRG 71
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
++E VY++ +S AQ+F +WV +V+ +R+ G Y +E
Sbjct: 72 TTFLTEQGVYQIAFRSNKIEAQQFTKWV-SKVVKEIRRNGYYILE 115
>gi|9964489|ref|NP_064957.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944698|gb|AAG02881.1|AF250284_175 AMV175 [Amsacta moorei entomopoxvirus 'L']
Length = 346
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F + KI+ ++ N WF K++ AL Y S+++ N + ++ + V
Sbjct: 34 FNYNDVKIK-VIGTINNPWFCGKNILKALEY--SDDSHNKILNRLDDKFKDNMYNILSSV 90
Query: 67 R--------------IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
R ++EP +Y +++ T SA+ F+ ++ ++LPT+RK
Sbjct: 91 RDNLSMTKNNKNKAIYLNEPGIYYIILHCTKDSAKGFQDFILFDLLPTIRK 141
>gi|167951301|ref|ZP_02538375.1| hypothetical protein Epers_35065 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 99
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+++ L +S P A +F +WV EEVLP +R+ G Y
Sbjct: 1 MHKSLFRSNKPEAIRFTKWVCEEVLPAIRRQGFY 34
>gi|225575219|ref|ZP_03783829.1| hypothetical protein RUMHYD_03308 [Blautia hydrogenotrophica DSM
10507]
gi|225037512|gb|EEG47758.1| hypothetical protein RUMHYD_03308 [Blautia hydrogenotrophica DSM
10507]
Length = 167
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
I E YRL +K+ ++KF+ V +E++P++RKTG Y ++
Sbjct: 91 FIPENIFYRLAMKAKNEVSEKFQAKVADEIIPSIRKTGGYQIQ 133
>gi|219871332|ref|YP_002475707.1| putative prophage antirepressor [Haemophilus parasuis SH0165]
gi|219691536|gb|ACL32759.1| possible prophage antirepressor [Haemophilus parasuis SH0165]
Length = 267
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVA 52
M+T+T F+ N ++++K+ + + A D+ TAL Y + +AI + +
Sbjct: 1 MTTLT---FQ-NTTLSVINKNNHTFLTANDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L+T GG Q+VR+ S + + + + A+ F +WV +
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD 99
>gi|328883814|emb|CCA57053.1| DNA-binding protein [Streptomyces venezuelae ATCC 10712]
Length = 273
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAIN-----AHCKGVAKRYP---LKTEGGIQK 65
+R + D WF DVA LGY S EA+ C A+ + GI+
Sbjct: 18 LRRLTAPDGTHWFPVVDVAKRLGYAGSREALRTVALPVTCLASAREITGGEVPGRSGIRA 77
Query: 66 V-RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R++S + +L+ P A F W EV+ +++ G Y +E
Sbjct: 78 ATRMVSLQGLVQLVGACRRPEAGPFRAWT-AEVIAAVQRYGGYGLE 122
>gi|148747758|ref|YP_001285837.1| hypothetical protein GBVE2_gp031 [Geobacillus virus E2]
gi|113715700|gb|ABI36849.1| hypothetical protein [Geobacillus virus E2]
Length = 274
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
++QLE K L + +T TQIG+ P + +NKLL + GLQ +V G + PT
Sbjct: 174 IEQLENKIEKRLTEEFEMQLVTPTQIGKMFEPAISGKEVNKLLQRAGLQW-RVGGEWVPT 232
Query: 217 PKGEERGGKMCDVPMQHVEGS-TQQLKW 243
+G++ P+Q G QLKW
Sbjct: 233 AEGKKYS---SSEPIQLESGKMVYQLKW 257
>gi|167855417|ref|ZP_02478183.1| possible prophage antirepressor [Haemophilus parasuis 29755]
gi|167853483|gb|EDS24731.1| possible prophage antirepressor [Haemophilus parasuis 29755]
Length = 267
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--------NAHCKGVA 52
M+T+T F+ N ++++K+ + + A D+ TAL Y + +AI + +
Sbjct: 1 MTTLT---FQ-NTTLSVINKNNHTFLTANDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L+T GG Q+VR+ S + + + + A+ F +WV +
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD 99
>gi|53717779|ref|YP_106765.1| hypothetical protein BPSL0137 [Burkholderia pseudomallei K96243]
gi|72537688|ref|YP_293718.1| hypothetical protein BPSphi5223_0012 [Burkholderia phage phi52237]
gi|167813652|ref|ZP_02445332.1| hypothetical protein Bpse9_00854 [Burkholderia pseudomallei 91]
gi|254183967|ref|ZP_04890558.1| conserved domain protein [Burkholderia pseudomallei 1655]
gi|254188203|ref|ZP_04894715.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|52208193|emb|CAH34124.1| hypothetical phage protein [Burkholderia pseudomallei K96243]
gi|72398378|gb|AAZ72613.1| hypothetical phage protein [Burkholderia phage phi52237]
gi|157935883|gb|EDO91553.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|184214499|gb|EDU11542.1| conserved domain protein [Burkholderia pseudomallei 1655]
Length = 181
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-------VAKRYPLKTEGGIQKVRII 69
+VD W +A ALGY + + + + + + L T GG Q+VRI
Sbjct: 19 VVDIHNVPWLRGPQIAGALGYNRDDRLADLYARNADEFTDEMTQLLELDTAGGRQQVRIF 78
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFE 95
S Y L + + A+ F WV +
Sbjct: 79 SPRGCYLLGMLARTDRAKSFRAWVLD 104
>gi|71901657|ref|ZP_00683734.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728561|gb|EAO30715.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 116
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 86 AQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
A F RWV + EVLP++RKTGSYS + + + + H ++L
Sbjct: 4 AAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALCAIWFLCDHFKKL 52
>gi|300724094|ref|YP_003713411.1| hypothetical protein XNC1_3241 [Xenorhabdus nematophila ATCC 19061]
gi|297630628|emb|CBJ91293.1| hypothetical protein XNC1_3241 [Xenorhabdus nematophila ATCC 19061]
Length = 134
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ TLP +F +WV EVLP +RKTGSY
Sbjct: 14 RGTLP--HRFRKWVTSEVLPAIRKTGSY 39
>gi|257793094|ref|YP_003186492.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|258510572|ref|YP_003184006.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477298|gb|ACV57617.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479786|gb|ACV60103.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 153
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPS 85
F A V A+G N +A+ L+ G +++ ++ E + RL +
Sbjct: 25 FDAMGVCEAVGLRNVEKALRRLDDDEQGSVILEGLDGREEIHVVRESGMLRLSLVGKDEH 84
Query: 86 AQKFERWVFEEVLPTLRKTGSY---SVEAPKLRATSASTVL 123
A+ +RW EVLP++ +TG Y +E +L+ A+ +
Sbjct: 85 ARALQRWATREVLPSVIRTGRYGEPDIEQEQLQLQKATLLF 125
>gi|330977805|gb|EGH77708.1| hypothetical protein PSYAP_13665 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 191
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
T TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G
Sbjct: 21 TPTPFHRHNRQLLALLLENQP-WFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGE 79
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
Q ++SE Y ++V + +W+ V+P LR
Sbjct: 80 AQSELMVSESGAYAMMVHHYHAENRGLRQWLTHVVVPALR 119
>gi|218695953|ref|YP_002403620.1| hypothetical protein from phage [Escherichia coli 55989]
gi|218352685|emb|CAU98466.1| hypothetical protein from phage [Escherichia coli 55989]
Length = 236
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENS-------NEAINAHCKGVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS N+ + G+
Sbjct: 29 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 88
Query: 53 KRYPLKTEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + A++F RWV +
Sbjct: 89 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTQVAKEFRRWVLD 132
>gi|255102975|ref|ZP_05331952.1| prophage antirepressor-related protein [Clostridium difficile
QCD-63q42]
Length = 288
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 46/221 (20%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + EF ++I T + K+++ W +A + Y + ++ I K A+ + ++ E
Sbjct: 1 MKNLIVKEFNGSQIYTFMWKEKSCW-IANQIVGLFDYADVSKTIQDCIK--AEDFEIEQE 57
Query: 61 GGIQK-------------------------VRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ K + I E +Y L + P +F +W+
Sbjct: 58 YDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRR 117
Query: 96 EVLPTLRKTGSYSV-----EAPKLRATSASTVLRVHKHLEELA---KQAGLKDNQLLLKV 147
EVLP +R+ G+Y +A + +A ++ V+K +E L AG+ + LL
Sbjct: 118 EVLPAIRQHGAYITNNADPQALREKANEIESLDTVNKTIEILTPFLDNAGIDEKAKLLTA 177
Query: 148 NRGVTKITGVD-QLEAMDIKHLPSSDNDEYLTITQIGERLN 187
+ + K G++ LE + +H + QI +LN
Sbjct: 178 -KTIYKKAGIELPLEIEEKEH--------FFDTVQIATKLN 209
>gi|254701082|ref|ZP_05162910.1| hypothetical protein Bsuib55_09524 [Brucella suis bv. 5 str. 513]
Length = 95
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
E + V +ISE +Y+L++KS AQKF+ W+ +V+P
Sbjct: 45 EAKARLVSLISEAGLYKLILKSRKKEAQKFQNWLARDVIP 84
>gi|150024581|ref|YP_001295407.1| hypothetical protein FP0483 [Flavobacterium psychrophilum JIP02/86]
gi|149771122|emb|CAL42589.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 276
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 44/205 (21%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG------ 62
FE+ ++R++ D DQ WF + + +G ++E N + K + R LK EG
Sbjct: 10 FEAKQVRSVWDADQEKWFFS--IVDVVGVLTTSENPNNYWKVLKNR--LKKEGSQLVTDC 65
Query: 63 -----------IQKVRIISEPDVYRLLVKSTLPSAQKFERWV-----------------F 94
K + ++RL+ P A+ F+ W+ F
Sbjct: 66 NQLKMQSADGKFYKTDVADTEQIFRLIQSVPSPKAEPFKLWLAKMGSERIDEIEDPEIGF 125
Query: 95 EEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
+ ++ T K G YS + R S + V K L + ++ G+K Q + +TK
Sbjct: 126 DRLMETYLKKG-YSEKWINQRLKS----IEVRKELTDEWEKRGVKKGQEYAILTDEITKA 180
Query: 155 -TGVDQLEAMDIKHLPSSDNDEYLT 178
TG+ E +K L + +++T
Sbjct: 181 WTGITTKEYKQLKDLKKENLRDHMT 205
>gi|134287198|ref|YP_001110894.1| Bro4 [Heliothis virescens ascovirus 3e]
gi|133722106|gb|ABO37228.1| Bro4 [Heliothis virescens ascovirus 3e]
Length = 237
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAI-----NAHCKGVAKRYPLKTEGGIQ-KV 66
+I ++ D +W +A A L Y N+ +AI N + K + K T +Q K
Sbjct: 14 EIISVKDDAGKLWMLANPFARILEYSNAPKAITKFVSNKNQKCLEKLNTKMTSSYVQAKS 73
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ I++ + L++KS + A +F W+ E+ P+L
Sbjct: 74 KFINKTGLLELVIKSKMRFAAEFRYWLVNELFPSL 108
>gi|29832083|ref|NP_826717.1| hypothetical protein SAV_5540 [Streptomyces avermitilis MA-4680]
gi|29609201|dbj|BAC73252.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 286
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 25 WFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK-------TEGGIQKVRIISEPDVYR 76
+ VA D+ A+ Y+ E+ I + KG L T GG+Q +++I + +
Sbjct: 34 FVVAADLGKAIDYKADAESFIRSLVKGPGDSRTLYVGNELIPTAGGLQTMKVIYKRGAFH 93
Query: 77 LLVKSTLPSAQKFERWVFE 95
L+++S LP A ++ VF+
Sbjct: 94 LMMRSNLPKAAEYRDQVFD 112
>gi|115334660|ref|YP_764506.1| hypothetical protein GPGV1_gp50 [Geobacillus phage GBSV1]
gi|84688610|gb|ABC61306.1| hypothetical protein [Geobacillus phage GBSV1]
Length = 51
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKG 50
V+ + N V DVA ALGY +EAI++HC+G
Sbjct: 18 VEINNNPHAVGNDVAKALGYSRPHEAISSHCRG 50
>gi|295104927|emb|CBL02471.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3]
Length = 438
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPL-- 57
M+ IT F + + + + + + AL Y N N+AI N H K + PL
Sbjct: 7 MTVITSKSFGALNVDVYQNDKHQYYMTREQIGAALEYNNPNKAIQNIHVKNTDRLDPLST 66
Query: 58 -----KTEGGIQKVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K EGGI K R + S V + S P A F + ++ + +R G +
Sbjct: 67 FLKLRKVEGGITKEREYIVYSLRGVMEICRLSRQPKADAFMDFCWDIMESLMR--GDSVL 124
Query: 110 EAPKLRATSASTVLRVHKH 128
PK+ A + + V H
Sbjct: 125 ATPKMDAALSKEFIDVRLH 143
>gi|114679897|ref|YP_758347.1| bro-b [Leucania separata nuclear polyhedrosis virus]
gi|39598628|gb|AAR28814.1| bro-b [Leucania separata nuclear polyhedrosis virus]
Length = 230
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 19 DKDQNIWFVAKDVATALGYENS-NEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
+ DQ +W +A+ Y NS N + H +Y E + I+ V L
Sbjct: 19 ESDQTVWMLAEPFVKLFKYTNSTNRVVGKHVSPKNMKYASDDER-FKNSEFINCTGVLEL 77
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRK 103
L +S + A++F W+ +LP+L K
Sbjct: 78 LCRSRMKYAREFSYWLINVLLPSLCK 103
>gi|262393908|ref|YP_003285762.1| transcriptional regulator MarR family [Vibrio sp. Ex25]
gi|262337502|gb|ACY51297.1| transcriptional regulator MarR family [Vibrio sp. Ex25]
Length = 167
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ +RA + H ++L+K++GL QL+L
Sbjct: 13 YEEVLVSIRQI---------IRA--------IDLHSKKLSKESGLTAPQLIL-------- 47
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ +++L+ + IK L S N T T I +RL +R +F+ + +R +Q K
Sbjct: 48 MRAINELDNVTIKQLSSHTNMSQATATTILDRL---ERGQFVER---QRSVQ-DKRKVHA 100
Query: 214 RPTPKGEERGGKMCDVPMQ-HVEGSTQQL-KWNSNLLVSFLQ 253
T KG+E K P+Q H Q+L +W +LL+S +Q
Sbjct: 101 VLTSKGQE-ALKQAPTPLQEHFINRFQKLEEWEQSLLLSSVQ 141
>gi|322377258|ref|ZP_08051750.1| toxin-antitoxin system, antitoxin component, Xre family
[Streptococcus sp. M334]
gi|321281971|gb|EFX58979.1| toxin-antitoxin system, antitoxin component, Xre family
[Streptococcus sp. M334]
Length = 258
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGV-----AKRYPL----KTEGGIQ 64
I +Q F+A+ +A + Y +++ + A + V K PL KT Q
Sbjct: 95 IYGSEQEPLFLARAIAEMIDYTKTSQGYYDVQAMLRKVDEDEKVKGTPLDGTTKTFRSGQ 154
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSAS 120
+V ++E +Y +L++ST P A++F++ V + +L +R G Y VE P+ +
Sbjct: 155 QVWFLTEHGLYEVLMRSTKPKAKEFKK-VIKHILKEIRLNGYYMDGELVEEPQTTIKAPD 213
Query: 121 TVLRVHK-HLEELAK 134
T+ + +++ LAK
Sbjct: 214 TLAEAERYYIDTLAK 228
>gi|294954286|ref|XP_002788092.1| flap endonuclease-1, putative [Perkinsus marinus ATCC 50983]
gi|239903307|gb|EER19888.1| flap endonuclease-1, putative [Perkinsus marinus ATCC 50983]
Length = 459
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKT---------GSYSVEAPKLRATSASTVLRV 125
YR+L PSA+ ER EE L + ++ P L T AS +R
Sbjct: 155 YRILDDDDEPSAELVERAAVEEALGVTSRQFVEVCVLAGCDFASHLPNLGFTVASRAMRE 214
Query: 126 HKHLEELAKQAGLKDNQLLL 145
HK +EE +Q L D Q +
Sbjct: 215 HKGIEEYLRQRELNDQQFRM 234
>gi|255657754|ref|ZP_05403163.1| toxin-antitoxin system, toxin component, Bro family [Mitsuokella
multacida DSM 20544]
gi|260849944|gb|EEX69951.1| toxin-antitoxin system, toxin component, Bro family [Mitsuokella
multacida DSM 20544]
Length = 184
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--KTEGGIQ 64
+ +S ++R + D +I+FV KD+A LGY+N +AI H + K G +Q
Sbjct: 4 YHLDSFQLRAVA-LDDDIYFVGKDLAKILGYKNERDAIRNHVRKHNKETCAIPDDRGVLQ 62
Query: 65 KVRIISEPDVYRLLVKSTLPSAQ---KFERWVFEEVLP 99
+ IS L+ +T S Q W +VLP
Sbjct: 63 QTNCISVEGALELI--NTCRSTQWVPMVRNWFNSKVLP 98
>gi|254695067|ref|ZP_05156895.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
gi|261215419|ref|ZP_05929700.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|260917026|gb|EEX83887.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
Length = 106
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 25 WFVAKDVATALGYE----------NSNEAINAHCKGVAKRY-PLKTEGGIQKVRI----- 68
WFVA DV + LG ++ +N K + +R P G ++K+
Sbjct: 15 WFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLMSGSVEKLFAFRQPS 74
Query: 69 ---ISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+SE +Y+L+++ P A+KF+ WV + V
Sbjct: 75 LLSVSESGLYKLIMRFRKPEAKKFQNWVTQVV 106
>gi|162447446|ref|YP_001620578.1| phage proteinputative antirepressor [Acholeplasma laidlawii PG-8A]
gi|161985553|gb|ABX81202.1| phage protein, putative antirepressor [Acholeplasma laidlawii
PG-8A]
Length = 248
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 8 EFESN---KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
EF +N K+RT + DQ F KD+ G +N N+ + K +K G
Sbjct: 4 EFHNNRYGKVRTAIIDDQPC-FNLKDLTHIYGIKNINDFRSRIPSNAVKTLEVKDSNGAS 62
Query: 65 KVRIISEPD-VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
K + D + + +ST A+ W++ VLP L K Y V+ K L
Sbjct: 63 KNKYFIIADYLSSCMFQSTKTDAEAISDWLYRTVLPNLIKYQKYKVDEFK----DPDVAL 118
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ E+L + + + QL L KI +D+L
Sbjct: 119 SFLEEFEDLRVRHSVVETQLKL----NAPKIKYIDRL 151
>gi|194291451|ref|YP_002007358.1| alcool deshydrogenase [Cupriavidus taiwanensis LMG 19424]
gi|193225355|emb|CAQ71299.1| putative alcool deshydrogenase [Cupriavidus taiwanensis LMG 19424]
Length = 363
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 97 VLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
+PT TGS P A+ + HL + +A + D QL+L V RG T TG
Sbjct: 135 AVPTTAGTGSEVT--PWATIWDAANQKKYSLHLPQTWPEAAIVDAQLMLSVPRGTTIATG 192
Query: 157 VDQL-----EAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLK 201
+D L ++ P SD + I E L PQ A L+ L L+
Sbjct: 193 LDALSHALESIWNVNANPVSDTFAVSAVEDIFETL--PQLAGNLDDLSLR 240
>gi|195124341|ref|XP_002006652.1| GI18468 [Drosophila mojavensis]
gi|193911720|gb|EDW10587.1| GI18468 [Drosophila mojavensis]
Length = 1373
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
PSAQ +FE L +R G S EA ++ + ++ T + AK L+++
Sbjct: 1096 PSAQLKSPSIFENYLRRMRGRGHLSKEAQRIHSMTSMTNMTSMT----AAKPPELEEDSP 1151
Query: 144 LLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARF-LNKLLLKR 202
+++ G KI + + ++ + D+ + + TQ+ E PP+R R N+ +L+
Sbjct: 1152 IVRRRPGKRKIYDISDEDKAEVTQILEEDSFQEVPATQLPELRTPPRRKRAKFNEFVLQE 1211
Query: 203 GLQ 205
Q
Sbjct: 1212 ADQ 1214
>gi|20069903|ref|NP_613107.1| BRO-b [Mamestra configurata NPV-A]
gi|20043297|gb|AAM09132.1| BRO-b [Mamestra configurata NPV-A]
Length = 372
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTV 122
K + I+ ++ L+ S +P AQ+F W+ ++L L TG Y + +AP + +
Sbjct: 116 KSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDAPADITEGMNVI 175
Query: 123 LRVH---------KHLEELAKQAGLKDNQLLLK 146
V K L EL + LKD + +K
Sbjct: 176 HSVTNDGKEAPWIKDLSELKQIVALKDQIIAMK 208
>gi|91227215|ref|ZP_01261674.1| transcriptional regulator, MarR family protein [Vibrio
alginolyticus 12G01]
gi|91188743|gb|EAS75031.1| transcriptional regulator, MarR family protein [Vibrio
alginolyticus 12G01]
Length = 158
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ +RA + H ++L+K++GL QL+L
Sbjct: 4 YEEVLVSIRQI---------IRA--------IDLHSKKLSKESGLTAPQLIL-------- 38
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ ++ L+ + IK L S N T T I +RL +R +F+ + +R +Q K
Sbjct: 39 MRAINDLDNVTIKQLSSHTNMSQATATTILDRL---ERGQFVER---QRSVQ-DKRKVHA 91
Query: 214 RPTPKGEERGGKMCDVPMQ-HVEGSTQQL-KWNSNLLVSFLQ 253
T KG+E K P+Q H Q+L +W +LL+S +Q
Sbjct: 92 VLTSKGQE-ALKQAPTPLQEHFINRFQKLEEWEQSLLLSSVQ 132
>gi|260944474|ref|XP_002616535.1| hypothetical protein CLUG_03776 [Clavispora lusitaniae ATCC 42720]
gi|238850184|gb|EEQ39648.1| hypothetical protein CLUG_03776 [Clavispora lusitaniae ATCC 42720]
Length = 392
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 39/186 (20%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD---VY 75
D+D + W + +G N +E C A P KTEG ++K+R+ S D V
Sbjct: 222 DEDDDEW-------SCVGILNGHEG-TVWCS--AFETPQKTEGALEKIRLASASDDLSVR 271
Query: 76 RLLVKST-----------LPSAQKFE----RWVFEEVLPTLRKTGSYSV----EAPKLRA 116
+ KST +PS+ K +W E VLP + K YSV ++ K+ +
Sbjct: 272 IWVSKSTSSEETGDRGNAIPSSIKHHSSEMQWELEGVLPQVHKYPVYSVAWSPKSGKIAS 331
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM-DIKHLPSSDNDE 175
T A + V+K +E G + + + GV +I V D + L ++ +D
Sbjct: 332 TGADGQIVVYKEVE------GKWEVESIKTAAHGVYEINCVTWCTLTNDREALVTAGDDG 385
Query: 176 YLTITQ 181
Y+ I +
Sbjct: 386 YINIWE 391
>gi|269967095|ref|ZP_06181163.1| transcriptional regulator, MarR family [Vibrio alginolyticus 40B]
gi|269828354|gb|EEZ82620.1| transcriptional regulator, MarR family [Vibrio alginolyticus 40B]
Length = 161
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ +RA + H ++L+K++GL QL+L
Sbjct: 7 YEEVLVSIRQI---------IRA--------IDLHSKKLSKESGLTAPQLIL-------- 41
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ ++ L+ + IK L S N T T I +RL +R +F+ + +R +Q K
Sbjct: 42 MRAINDLDNVTIKQLSSHTNMSQATATTILDRL---ERGQFVER---QRSVQ-DKRKVHA 94
Query: 214 RPTPKGEERGGKMCDVPMQ-HVEGSTQQL-KWNSNLLVSFLQ 253
T KG+E K P+Q H Q+L +W +LL+S +Q
Sbjct: 95 VLTSKGQE-ALKQAPTPLQEHFINRFQKLEEWEQSLLLSSVQ 135
>gi|12597544|ref|NP_075128.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483810|gb|AAG53802.1|AF271059_59 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 244
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 3 TITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKR 54
++T +F ++ T VD + W VA A AL Y +N+AI N K
Sbjct: 2 SLTKIQFGDKEVETYTVDFNGEKWMVANPFAEALNYSRANKAILEKVSDGNQKTFDQIKP 61
Query: 55 YPLKTEGGIQ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
Y + +G + + I+ V+ L++ S + A++F W+ L T +T
Sbjct: 62 YRIVHDGTGESSVIPRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWLSSVKLNTTVET 121
Query: 105 GSYSVEAPKLRATSASTVL 123
S + E + RA +A+ L
Sbjct: 122 DSIA-EFNEWRADAANMAL 139
>gi|15426319|ref|NP_203614.1| bro-a [Helicoverpa armigera NPV]
gi|15384395|gb|AAK96306.1|AF303045_48 bro-a [Helicoverpa armigera NPV]
Length = 244
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 3 TITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKR 54
++T +F ++ T VD + W VA A AL Y +N+AI N K
Sbjct: 2 SLTKIQFGDKEVETYTVDFNGEKWMVANPFAEALNYSRANKAILEKVSDGNQKTFDQIKP 61
Query: 55 YPLKTEGGIQ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
Y + +G + + I+ V+ L++ S + A++F W+ L T +T
Sbjct: 62 YRIVHDGTGESSVIPRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWLSSVKLNTTVET 121
Query: 105 GSYSVEAPKLRATSASTVL 123
S + E + RA +A+ L
Sbjct: 122 DSIA-EFNEWRADAANMAL 139
>gi|306834625|ref|ZP_07467734.1| transposase [Streptococcus bovis ATCC 700338]
gi|304423224|gb|EFM26381.1| transposase [Streptococcus bovis ATCC 700338]
Length = 404
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV----------- 122
VY LL K PSAQK R +F +L R T +A +++ T+ T+
Sbjct: 195 VYELLTK--YPSAQKIARAIFSSLLKIKRLTAD---KAHQIQETAKQTIGNASPALSLEL 249
Query: 123 ---LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV-DQLEAM---DIKHLPSSDNDE 175
+ KH ++ Q + N L+ +N +T ITG+ +L A+ +IK + + N
Sbjct: 250 VQLIESIKHYDKQINQTQEEINLLMNNLNSPITSITGIGSRLGAIILAEIKTIHNFKNPN 309
Query: 176 YL--------TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER----G 223
L I Q G+ N + + L +Q +K+ Y P K R
Sbjct: 310 QLQAFAGLDPAIYQSGQMDNAGHMVKRGSSYLRYALIQAAKLISIYSPHFKAYLRLKISQ 369
Query: 224 GKMCDVPMQHV 234
GK +V + HV
Sbjct: 370 GKHYNVAVTHV 380
Searching..................................................done
Results from round 2
>gi|254780125|ref|YP_003064538.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039802|gb|ACT56598.1| prophage antirepressor [Candidatus Liberibacter asiaticus str.
psy62]
gi|317120696|gb|ADV02519.1| putative Bro-N family phage antirepressor [Liberibacter phage SC1]
gi|317120739|gb|ADV02561.1| putative Bro-N family phage antirepressor [Liberibacter phage SC2]
gi|317120800|gb|ADV02621.1| putative Bro-N family phage antirepressor [Liberibacter phage SC2]
gi|317120840|gb|ADV02661.1| putative Bro-N family phage antirepressor [Liberibacter phage SC1]
Length = 262
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE
Sbjct: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS
Sbjct: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT
Sbjct: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ
Sbjct: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
Query: 241 LKWNSNLLVSFLQNELINTPRL 262
LKWNSNLLVSFLQNELINTPRL
Sbjct: 241 LKWNSNLLVSFLQNELINTPRL 262
>gi|315121965|ref|YP_004062454.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495367|gb|ADR51966.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 263
Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats.
Identities = 183/263 (69%), Positives = 210/263 (79%), Gaps = 5/263 (1%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+ I PFEFESN+IRT+VD+D I FVAKD+A ALGY+NSNEA+N HCKGV KRYPLK
Sbjct: 1 MNNINIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGYKNSNEAVNEHCKGVVKRYPLK 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T+GGIQKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS++ KL S
Sbjct: 61 TDGGIQKVRVILESDVYRLIVKSKLPSAEKFERWVFEEVLPTLRKTGSYSIKPQKLP--S 118
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A+T++R HKHLE LAKQAGLKDNQLLLKVNRGVTKITGVDQLE MDIKHL S DNDEYL
Sbjct: 119 ATTIMRFHKHLEVLAKQAGLKDNQLLLKVNRGVTKITGVDQLEVMDIKHLLSPDNDEYLA 178
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQV-SKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
T+IG+ LNP +A+ LN L GLQ+ G+ PTPKGEE GGKMCDV +QHVEGS
Sbjct: 179 PTEIGKSLNPVIKAKALNSWLTYLGLQIPKHTKKGFLPTPKGEELGGKMCDVALQHVEGS 238
Query: 238 TQQLKWNSNLLVSFLQNELINTP 260
T LKWN ++V +LQ + N
Sbjct: 239 TPYLKWNPKVIVPYLQKLIGNHQ 261
>gi|315122933|ref|YP_004063422.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496335|gb|ADR52934.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 264
Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats.
Identities = 185/264 (70%), Positives = 212/264 (80%), Gaps = 6/264 (2%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL- 57
MS I PFEFESN+IRT+VD+D I FVAKD+A ALGYENS++AIN HCKGV KRYP+
Sbjct: 1 MSNINIIPFEFESNRIRTVVDEDNTILFVAKDIAEALGYENSSKAINDHCKGVTKRYPIV 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ G QKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS++ KL
Sbjct: 61 DSLGRTQKVRVILESDVYRLMVKSKLPSAEKFERWVFEEVLPTLRKTGSYSIKPQKLP-- 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
SA+T++R HKHLE LAKQAGLKDNQLLLKVNRGVTKITGVDQLE MDIKHL S DNDEYL
Sbjct: 119 SATTIMRFHKHLEVLAKQAGLKDNQLLLKVNRGVTKITGVDQLEVMDIKHLLSPDNDEYL 178
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSG-GYRPTPKGEERGGKMCDVPMQHVEG 236
T T IGE LNP +A+ LN + GLQ+SK +G GY PTPKGEE GGKMCDVP+QHVEG
Sbjct: 179 TPTAIGELLNPVIKAKALNSWMTYLGLQISKHTGKGYIPTPKGEELGGKMCDVPLQHVEG 238
Query: 237 STQQLKWNSNLLVSFLQNELINTP 260
STQ LKWN +++ +LQ + N
Sbjct: 239 STQSLKWNPKVIIPYLQKLIGNHQ 262
>gi|71898928|ref|ZP_00681095.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731340|gb|EAO33404.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 387
Score = 293 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 104/254 (40%), Positives = 143/254 (56%), Gaps = 10/254 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 137 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTP 196
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 197 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 256
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEYL 177
V + + ++K G+K + T + E + LP+ D L
Sbjct: 257 QDRVAALLLIGQFVSKVPGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCML 314
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
TQ+G++L+ A+ N+LL GLQ + T G G +P S
Sbjct: 315 NATQLGKQLH--CSAKEANQLLASAGLQFRNERDEWALTEAGRVWGEA---IPYSRNGHS 369
Query: 238 TQQLKWNSNLLVSF 251
+ Q+ WN +L S
Sbjct: 370 SYQILWNPTVLDSL 383
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H V+KR
Sbjct: 1 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALELLNPRAALAQHVDAENVSKRKT 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + +
Sbjct: 61 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHIIPLHSAID 120
Query: 117 TSAST 121
++ S
Sbjct: 121 SAPSA 125
>gi|71899745|ref|ZP_00681896.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730440|gb|EAO32520.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 251
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 104/254 (40%), Positives = 142/254 (55%), Gaps = 10/254 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF FES+ +RT+VD +WFV DVAT LGY N ++A++AHCKG AKR PL+T
Sbjct: 1 MNAITPFHFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GGIQK+RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 61 GGIQKIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 120
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EYL 177
V + + ++K G+K + T + E + LP+ L
Sbjct: 121 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCLL 178
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
TQ+G+RL+ A+ +N+LL RG Q + T G +P S
Sbjct: 179 NATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IPYSRNGHS 233
Query: 238 TQQLKWNSNLLVSF 251
+ QL WN ++
Sbjct: 234 SYQLLWNPEVIACL 247
>gi|28198899|ref|NP_779213.1| hypothetical protein PD1001 [Xylella fastidiosa Temecula1]
gi|182681602|ref|YP_001829762.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28056997|gb|AAO28862.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631712|gb|ACB92488.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307580036|gb|ADN64005.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 262
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/254 (40%), Positives = 144/254 (56%), Gaps = 10/254 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ +TPF+FES+ +RT+VD +WFV DVAT LGY N ++A++AHCKG AKR PL+T
Sbjct: 12 MNAMTPFQFESHAVRTVVDDHGEVWFVGTDVATVLGYANPHKALDAHCKGCAKRTPLQTP 71
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
GGIQ++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L +
Sbjct: 72 GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGPT 131
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EYL 177
V + + ++K G+K + T + E + LP+ L
Sbjct: 132 QDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCLL 189
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
TQ+G+RL+ A+ +N+LL RG Q + T G +P S
Sbjct: 190 NATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IPYSRNGHS 244
Query: 238 TQQLKWNSNLLVSF 251
+ QL WN +++
Sbjct: 245 SYQLLWNPDVIACL 258
>gi|71901490|ref|ZP_00683577.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728746|gb|EAO30890.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 412
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 100/255 (39%), Positives = 141/255 (55%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ AHCKGVAK YP+ +
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYANHNDALGAHCKGVAKCYPIPDS 220
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G +++ RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L
Sbjct: 221 LGRLRETRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGP 280
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ + + + ++ G+K + T + E + LP+ D
Sbjct: 281 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 338
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 339 LNATQLGKQLH--CSAKEANQLLASAGLQFRNERDEWALTEAGRVWGEA---IPYSRNGH 393
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 394 SSYQILWNPTVLDSL 408
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ AL N A+ H + V+KR
Sbjct: 27 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICAALELLNPRAALAQHVGAENVSKRKT 86
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+ G + ++E VY LL+ ST +A++F RW+ E
Sbjct: 87 INAVGWTKHANYLNESGVYALLIGSTKAAAKRFRRWLISE 126
>gi|273810427|ref|YP_003344898.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097802|gb|ACV41108.1| Bro-N family protein [Xylella phage Xfas53]
Length = 431
Score = 281 bits (720), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/255 (38%), Positives = 138/255 (54%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF+FES +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP+ +
Sbjct: 180 MNAITPFQFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPIPDS 239
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G ++ RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG+YS P L
Sbjct: 240 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTGTYSTPGALPTLPGP 299
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ V + + ++K G+K + T + E + LP+ D
Sbjct: 300 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 357
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 358 LNATQLGKQLH--CSAKAANQLLASSGLQFRNERDAWELTEAGRMWGEA---IPYSRNGH 412
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 413 SSYQILWNPTVVDSL 427
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+ + F +FES+ +R +D+ + WF A D+ TAL N A+ H V+KR
Sbjct: 46 MNAPSEFTLQFESHAVRVQLDEHERRWFNANDICTALELLNPCAALAHHVDAENVSKRAA 105
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+ T G + V ++E VY LL+ ST +A++F +W+ E
Sbjct: 106 IDTIGRTKHVNYLNESGVYALLIGSTKEAAKRFRQWLTSE 145
>gi|315122913|ref|YP_004063402.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496315|gb|ADR52914.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 261
Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats.
Identities = 137/263 (52%), Positives = 177/263 (67%), Gaps = 12/263 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I PFEFESNKIRT+VDKD I FVAKD+A ALGY+NSNEA+N HCKGV KRYPLKT+
Sbjct: 1 MSNIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGYKNSNEAVNEHCKGVVKRYPLKTD 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQKVR+I E DVYRL+VKS LPSA+KFERWVFEEVLPTLRKTGSYS+ PK +
Sbjct: 61 GGIQKVRVILESDVYRLIVKSKLPSAEKFERWVFEEVLPTLRKTGSYSINPPKPQVFITG 120
Query: 121 TVLRVHKHLEE----LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+L+ + L + L ++AG+ +NQ+L+ +R + + GV+ +DI P+ +N +Y
Sbjct: 121 GLLKELRLLTDNHGNLMRKAGIDENQILIASSRVMESVLGVNPANTLDI---PTPNNSQY 177
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRG-LQVSKVSGGYR---PTPKGEERGGKMCDVPMQ 232
T T +GE+L R +NK L++ G L V G R T KG+E GG++ D +
Sbjct: 178 YTATALGEQLPVKLSGREINKRLVRLGFLLVEHEPSGKRRNILTTKGKELGGRVFDSGKK 237
Query: 233 HVEGS-TQQLKWNSNLLVSFLQN 254
H +GS Q +KW N+L N
Sbjct: 238 HSDGSIVQSIKWQENILDILKAN 260
>gi|71899883|ref|ZP_00682031.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730323|gb|EAO32406.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 82/255 (32%), Positives = 125/255 (49%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 196
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 197 AGGRQRVNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 256
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ V + + ++K G+K + T + E + LP+ D
Sbjct: 257 TQDRVAALLLIGQFVSKVPGMKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 314
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 315 LNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDAWELTEAGRVWGEA---IPYSRNGH 369
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 370 SSYQILWNPTVLDSL 384
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+ + F +FES+ +R +D+ + WF A D+ TAL N A+ H V+KR
Sbjct: 1 MNAPSEFALQFESHAVRVQLDEHERRWFNANDICTALALLNPRAALAQHVDAENVSKRKT 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE---APK 113
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + + A
Sbjct: 61 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHIIPLHSAID 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
++ S H + + ++++ + + A+ P
Sbjct: 121 SAPSAPSPFQHTENHTMNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAI 180
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
+ ++ + + + P R + + GL
Sbjct: 181 ESHVDVEDLQKLEAPTAGGRQRVNHINESGL 211
>gi|71901327|ref|ZP_00683423.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728911|gb|EAO31046.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 388
Score = 266 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 137 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 196
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 197 AGGRQRVNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 256
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ + + + ++ G+K + T + E + LP+ D
Sbjct: 257 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 314
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 315 LNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDAWELTEAGRVWGEA---IPYSRNGH 369
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 370 SSYQILWNPTVLDSL 384
Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 7/211 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H V+KR
Sbjct: 1 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALALLNPRAALAQHVDAENVSKRKT 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE---APK 113
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + + A
Sbjct: 61 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHIIPLHSAID 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
++ S H + + ++++ + + A+ P
Sbjct: 121 SAPSAPSPFQHTEDHAMNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAI 180
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
+ ++ + + + P R + + GL
Sbjct: 181 ESHVDVEDLQKLEAPTAGGRQRVNHINESGL 211
>gi|170730325|ref|YP_001775758.1| hypothetical protein Xfasm12_1177 [Xylella fastidiosa M12]
gi|167965118|gb|ACA12128.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 420
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 169 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 228
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 229 AGGRQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 288
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ + + + ++ G+K + T + E + LP+
Sbjct: 289 TQDRIAALLLIGQYISTVPGMKPGIAAAATLACIKSNTNLTTEELR--RALPALQEPLCL 346
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL G Q + T G G +P
Sbjct: 347 LNATQLGKQLH--CSAKAANQLLASSGFQFRNERDAWELTEAGRMWGEA---IPYSRNGH 401
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 402 SSYQILWNPTVLDSL 416
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 8/225 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+ + F +FES+ +R +D+ + WF A D+ AL N A+ H + V+KR
Sbjct: 33 MNAPSEFTLQFESHAVRVQLDEHERRWFNANDICAALELLNPRAALAQHVGAENVSKRKT 92
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE---APK 113
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + + A
Sbjct: 93 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHIIPLHSAID 152
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ S H + + ++++ + + A+ P
Sbjct: 153 SAPSVPSPFQHTENHTMNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAI 212
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
+ ++ + + + P R + + GL S + G +P K
Sbjct: 213 ESHVDVEDLQKLEAPTAGGRQRVNHINESGL-YSLIMGSTKPAAK 256
>gi|71276266|ref|ZP_00652544.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900321|ref|ZP_00682456.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162874|gb|EAO12598.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729896|gb|EAO31992.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 408
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ ITPF+FES +R +D+ WF A DV L + N ++AI +H ++ T
Sbjct: 157 MNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVEDLQKLEAPT 216
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 217 AGGRQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 276
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ + + + ++ G+K + T + E + LP+ D
Sbjct: 277 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 334
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL G Q + T G G +P
Sbjct: 335 LNATQLGKQLH--CSAKAANQLLASSGFQFRNERDAWELTEAGRVGGEA---IPYSRNGH 389
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN +L S
Sbjct: 390 SSYQILWNPTVLDSL 404
Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+T + F +FES+ +R +D+ + WF A D+ TAL N A+ H + V+KR
Sbjct: 21 MNTPSEFTLQFESHAVRVQLDEHERRWFNANDICTALELLNPCAALAQHVGAENVSKRKT 80
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE---APK 113
+ G + ++E VY LL+ ST +A++F +W+ +E LP +K G + + A
Sbjct: 81 IDAVGWTKHANYLNESGVYALLIGSTKEAAKRFRQWLTDEALPAAQKAGHHIIPLHSAID 140
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
++ S H + + ++++ + + A+ P
Sbjct: 141 SAPSAPSPFQHTENHTMNAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAI 200
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
+ ++ + + + P R + + GL S + G +P K
Sbjct: 201 ESHVDVEDLQKLEAPTAGGRQRVNHINESGL-YSLIMGSTKPAAK 244
>gi|15837286|ref|NP_297974.1| hypothetical protein XF0684 [Xylella fastidiosa 9a5c]
gi|9105566|gb|AAF83494.1|AE003912_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 503
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV + L + N +AI +H V K
Sbjct: 252 NAITPFQFESKDVRIQLDEASAPWFNANDVCSILEFGNPRQAIESHVDVEDVQKLDATDN 311
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G ++ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 312 LGRTRQTNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 371
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEY 176
+ + + + ++ G+K + T + E + LP+ D
Sbjct: 372 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALRDPLCM 429
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ +N+LL RGLQ + T G G +P
Sbjct: 430 LNATQLGKQLH--CSAKAVNQLLASRGLQFRNERDDWELTEAGRVWGEA---IPYSRNGH 484
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 485 SSYQILWNPTVVDSL 499
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/105 (63%), Positives = 84/105 (80%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HCKGV KRYPL+T
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCKGVPKRYPLQTP 194
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
GGIQ++RIISEPD+ RL+V S LP+A++FERWV EVLPT+ KTG
Sbjct: 195 GGIQEIRIISEPDMLRLIVSSKLPAAERFERWVTSEVLPTIHKTG 239
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+ + F +FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR
Sbjct: 1 MNASSEFTLQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKI 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEA 111
+ T G Q+ ++EP V LL+ ST +A++ RW+ E LP ++K G +SV
Sbjct: 61 IDTIGRTQRANYLNEPGVLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSVPQ 117
>gi|28199601|ref|NP_779915.1| hypothetical protein PD1726 [Xylella fastidiosa Temecula1]
gi|77747679|ref|NP_779339.2| hypothetical protein PD1133 [Xylella fastidiosa Temecula1]
gi|28057716|gb|AAO29564.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 503
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 252 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDA 311
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 312 LGRTQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 371
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ V + + ++K G+K + T + E + LP+
Sbjct: 372 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCL 429
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 430 LNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDDWELTEAGRVWGEA---IPYSRNGH 484
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 485 SSYQILWNPTVVDSL 499
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 69/105 (65%), Positives = 87/105 (82%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTS 194
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG
Sbjct: 195 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTG 239
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+ + F +FES+ +R +D+ + WF A D+ AL N A+ H V+KR
Sbjct: 1 MNAPSEFHLQFESHAVRVQLDEHKRRWFNANDICAALELLNPRAALAQHVDAENVSKRAA 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+ T G + V ++E VY LL+ ST +A++F +W+ E
Sbjct: 61 IDTIGRTKHVNYLNESGVYALLIGSTKEAAKRFRQWLISE 100
>gi|182681747|ref|YP_001829907.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182682342|ref|YP_001830502.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057123|gb|AAO28988.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631857|gb|ACB92633.1| prophage antirepressor [Xylella fastidiosa M23]
gi|182632452|gb|ACB93228.1| prophage antirepressor [Xylella fastidiosa M23]
gi|307578623|gb|ADN62592.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
gi|307580176|gb|ADN64145.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 535
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 284 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDA 343
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+V I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 344 LGRTQRVNHINESGLYSLIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 403
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ V + + ++K G+K + T + E + LP+
Sbjct: 404 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCL 461
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ +N+LL GLQ + T G G +P
Sbjct: 462 LNATQLGKQLH--CSAKAVNQLLASSGLQFRNERDDWELTEAGRVWGEA---IPYSRNGH 516
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 517 SSYQILWNPTVVDSL 531
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 69/105 (65%), Positives = 87/105 (82%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV KRYPL+T
Sbjct: 167 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVPKRYPLQTS 226
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
GG+Q++RIISEPD+ RL+V S LP+A++FERWVFEEVLPTLRKTG
Sbjct: 227 GGVQEIRIISEPDMLRLIVSSKLPAAERFERWVFEEVLPTLRKTG 271
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+ + F +FES+ +R +D+ + WF A D+ AL N A+ H V+KR
Sbjct: 33 MNAPSEFHLQFESHAVRVQLDEHKRRWFNANDICAALELLNPRAALAQHVDAENVSKRAA 92
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
+ T G + V ++E VY LL+ ST +A++F +W+ E
Sbjct: 93 IDTIGRTKHVNYLNESGVYALLIGSTKEAAKRFRQWLISE 132
>gi|53803190|ref|YP_115046.1| hypothetical protein MCA2642 [Methylococcus capsulatus str. Bath]
gi|53756951|gb|AAU91242.1| conserved domain protein [Methylococcus capsulatus str. Bath]
Length = 252
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 11/255 (4%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + PF+FE +R + D WFVA DVA +L Y +++ + ++T
Sbjct: 1 MSTELIPFDFEGRPVRVVTDAQGEPWFVAADVAQSLEYRMASDMTRSLDDDEKGTQIVRT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q++ +I+E +Y ++KS P A++F+RWV EVLP +RKTG+Y+ A P L
Sbjct: 61 PSGNQEMLVINESGLYSAILKSRKPEAKRFKRWVTHEVLPAIRKTGAYAAGATLPALPVP 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ V + E +AK G+K + + + TG+ + LP+++
Sbjct: 121 TQDRVSSILLIGEAVAKVPGVKAGIAMAATLTCIQENTGL--AVETLRRALPAANAPICS 178
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G+ +N + A+ N+LL GLQ + T GE M P
Sbjct: 179 LNATQLGKLIN--RSAKATNQLLAATGLQFRNKRDEWELTEAGEAWAEAM---PYSRNGH 233
Query: 237 STQQLKWNSNLLVSF 251
S Q+ WN ++
Sbjct: 234 SGYQILWNPAVVEQL 248
>gi|9107730|gb|AAF85322.1|AE004059_12 phage-related protein [Xylella fastidiosa 9a5c]
Length = 530
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K +
Sbjct: 279 NAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVIDA 338
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 339 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 398
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ + + + ++ G+K + T + E + LP+
Sbjct: 399 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIRRV--LPALQEPLCM 456
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 457 LNATQLGKQLH--CSAKEANQLLASAGLQFRNERDDWELTEAGRVWGEA---IPYSRNGH 511
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 512 SSYQILWNPTVVDSL 526
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 9/198 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP L +
Sbjct: 161 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPILDS 220
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ RIISEPD+ RL+V S LP+A++FERWVFEE+LPTLRKTG P L ++
Sbjct: 221 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTG----NRPALDHSTH 276
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
S E + L + V + H+ + D + I
Sbjct: 277 SANAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVI 336
Query: 180 TQIGERLNPPQRARFLNK 197
+G QRA +N+
Sbjct: 337 DALGR----TQRANHINE 350
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+ + F +FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR
Sbjct: 27 MNAPSEFTLQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKI 86
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEA 111
+ T G Q+ ++EP + LL+ ST +A++ RW+ E LP ++K G +SV
Sbjct: 87 IDTIGRTQRANYLNEPGMLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSVPQ 143
>gi|77747608|ref|NP_299802.2| hypothetical protein XF2524 [Xylella fastidiosa 9a5c]
Length = 504
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N ++AI +H + K +
Sbjct: 253 NAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVIDA 312
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 313 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 372
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ + + + ++ G+K + T + E + LP+
Sbjct: 373 TQDRIAALLLIGQYISTVPGVKPGIAAAATLACIKSNTNLTTEEIRRV--LPALQEPLCM 430
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G++L+ A+ N+LL GLQ + T G G +P
Sbjct: 431 LNATQLGKQLH--CSAKEANQLLASAGLQFRNERDDWELTEAGRVWGEA---IPYSRNGH 485
Query: 237 STQQLKWNSNLLVSF 251
S+ Q+ WN ++ S
Sbjct: 486 SSYQILWNPTVVDSL 500
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 9/198 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ ITPF+FES+ +RT+VD +WFV KDVA LGY N N+A+ HC+GV K YP L +
Sbjct: 135 MNAITPFQFESHAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCRGVTKCYPILDS 194
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ RIISEPD+ RL+V S LP+A++FERWVFEE+LPTLRKTG P L ++
Sbjct: 195 LGRSRETRIISEPDMLRLIVSSKLPAAERFERWVFEELLPTLRKTG----NRPALDHSTH 250
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
S E + L + V + H+ + D + I
Sbjct: 251 SANAITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDADDLQKLEVI 310
Query: 180 TQIGERLNPPQRARFLNK 197
+G QRA +N+
Sbjct: 311 DALGR----TQRANHINE 324
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 1 MSTITPF--EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYP 56
M+ + F +FES+ +R VD+ WF A D+ TA+ N A+ H + V+KR
Sbjct: 1 MNAPSEFTLQFESHAVRVQVDEAGTPWFNANDICTAVELLNPCAALAQHVGARNVSKRKI 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP--TLRKTGSYSVEA 111
+ T G Q+ ++EP + LL+ ST +A++ RW+ E LP ++K G +SV
Sbjct: 61 IDTIGRTQRANYLNEPGMLTLLIGSTKEAAKRLRRWLISEALPAAAVQKAGQHSVPQ 117
>gi|222112392|ref|YP_002554656.1| prophage antirepressor [Acidovorax ebreus TPSY]
gi|221731836|gb|ACM34656.1| prophage antirepressor [Acidovorax ebreus TPSY]
Length = 252
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
MS I PF+FE++ +R VD WF A DV AL N ++AI H ++ T
Sbjct: 1 MSAIIPFQFEAHAVRVQVDDQGQPWFNATDVCDALEMGNPSQAIKTHVDAEDLQKLETLT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
GG Q+ ++E +Y L++ ST +A++F+RWV EVLP +RKTG Y+V L A
Sbjct: 61 AGGRQRQNHVNESGLYALILGSTKDAAKRFKRWVTSEVLPAIRKTGGYTVPGALATLPAP 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ V + E +AK G+K + + TG+ + + LPS++
Sbjct: 121 THDRVSAILLIGEAVAKVPGVKPGIAAAATLTCIQENTGITT--EVLRRALPSANEPICA 178
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G+ LN + A+ N++L G Q + T GE M P
Sbjct: 179 LNATQLGKLLN--RSAKATNQMLAAGGFQFRNERDEWELTEAGEGWAEAM---PYSRNGH 233
Query: 237 STQQLKWNSNLLVSF 251
S Q+ WN +
Sbjct: 234 SGYQILWNPAVAEQL 248
>gi|315121946|ref|YP_004062435.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495348|gb|ADR51947.1| prophage antirepressor [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 262
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 125/264 (47%), Positives = 169/264 (64%), Gaps = 13/264 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
MS+I PFEFESNKIRT+VDKD I FVAKD+A ALGY+ N+A+N HC G K P+ +
Sbjct: 1 MSSIIPFEFESNKIRTVVDKDNTILFVAKDIAEALGYKRPNDAVNEHCDGTVKHRPIVDS 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G QK R+I EPDVYRL+VKS LPSAQKFERW+FEEVLPTLRKTGSYS++ PK +
Sbjct: 61 LGRKQKTRVIKEPDVYRLIVKSKLPSAQKFERWIFEEVLPTLRKTGSYSIKPPKPQVFIT 120
Query: 120 STVLRVHKHLEE----LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+L+ + L + L ++AG+ +NQ+L+ +R + + GV+ +DI P+ +N +
Sbjct: 121 GGLLKELRLLTDNHGNLMRKAGIDENQILIASSRVMESVLGVNPANTLDI---PTPNNSQ 177
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRG-LQVSKVSGGYR---PTPKGEERGGKMCDVPM 231
Y T T +GE+L R +NK L++ G L V G R T KG+E GG++ D
Sbjct: 178 YYTATALGEQLPVKLSGREINKRLVRLGFLLVEHEPSGKRRNILTTKGKELGGRVFDSGK 237
Query: 232 QHVEGS-TQQLKWNSNLLVSFLQN 254
+H +GS Q +KW N+L N
Sbjct: 238 KHSDGSIVQSIKWQENILDILKAN 261
>gi|15838264|ref|NP_298952.1| hypothetical protein XF1663 [Xylella fastidiosa 9a5c]
gi|9106723|gb|AAF84472.1|AE003992_8 phage-related protein [Xylella fastidiosa 9a5c]
Length = 381
Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKT 59
+ ITPF+FES +R +D+ WF A DV L + N+++AI +H + K + T
Sbjct: 130 NAITPFQFESKDVRIQLDEANAPWFNANDVCAVLEFGNAHQAIESHVDVDDLQKLEVIDT 189
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRAT 117
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L
Sbjct: 190 LGRTQRANHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGP 249
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
+ V + + ++K G+K + T + E + LP+
Sbjct: 250 TQDRVAALLLIGQFVSKVTGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCL 307
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
L TQ+G+RL+ A+ +N+LL G Q + T G +P
Sbjct: 308 LNATQLGKRLH--CSAKAVNQLLASAGFQFRNERDEWELTEAGRVWCEA---IPYSRNGH 362
Query: 237 STQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 363 SSYQLLWNPDVIACL 377
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 9/198 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF FES +RT+VD +WFV KDVA LGY N N+A+ AHCKGVAKRYPL +
Sbjct: 12 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYANHNDALGAHCKGVAKRYPLPDS 71
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G +Q RIISEPD++RL+ S LP+A++FERWVFE VLPT+ KTG + A SA
Sbjct: 72 LGRLQYFRIISEPDMFRLIAGSKLPAAERFERWVFEGVLPTIHKTG--NRSALDHSTHSA 129
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + +++ Q + N N + + +A++ H+ D + I
Sbjct: 130 NAITPFQFESKDVRIQLD-EANAPWFNANDVCAVLEFGNAHQAIE-SHVDVDDLQKLEVI 187
Query: 180 TQIGERLNPPQRARFLNK 197
+G QRA +N+
Sbjct: 188 DTLGR----TQRANHINE 201
>gi|71276718|ref|ZP_00652986.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71276734|ref|ZP_00653001.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900867|ref|ZP_00682983.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71902520|ref|ZP_00684445.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162461|gb|EAO12196.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71162476|gb|EAO12210.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71727755|gb|EAO30023.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729338|gb|EAO31453.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 370
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 12/254 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
ITPF+FES +R +D+ WF A DV L + N ++AI +H + K
Sbjct: 120 AITPFQFESKDVRIQLDEASAPWFNANDVCAVLEFGNPHQAIESHVDVDDLQKLEVTDAL 179
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRATS 118
G Q+ I+E +Y L++ ST P+A++F+RWV EVLPTLRKTG+YS P L +
Sbjct: 180 GRTQRTNHINESGLYALIMGSTKPAAKRFKRWVTSEVLPTLRKTGTYSTPGALPTLPGPT 239
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EYL 177
+ + + ++ G+K + T + E + LP+ L
Sbjct: 240 QDRIAALLLIGQYISTVPGMKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCLL 297
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
TQ+G+RL+ A+ +N+LL RG Q + T G +P S
Sbjct: 298 NATQLGKRLH--CSAKAVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IPYSRNGHS 352
Query: 238 TQQLKWNSNLLVSF 251
+ QL WN +++
Sbjct: 353 SYQLLWNPDVIACL 366
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 66/106 (62%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ ITPF FES +RT+VD +WFV KDVA LGY N N+A+ HCKGVAKRYPL +
Sbjct: 1 MNAITPFHFESQAVRTVVDDHGEVWFVGKDVADVLGYTNHNKALGDHCKGVAKRYPLPDS 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
G +Q RIISEPD++RL+ S LP+A++FERWVFE VLPT+RKTG
Sbjct: 61 LGRLQYFRIISEPDMFRLIAGSKLPAAERFERWVFEGVLPTIRKTG 106
>gi|255020306|ref|ZP_05292374.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
gi|254970226|gb|EET27720.1| prophage antirepressor [Acidithiobacillus caldus ATCC 51756]
Length = 257
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK- 58
MS + PF+FE +R + D WFVA DV L N+ A+ ++
Sbjct: 1 MSTELIPFDFEGRPVRVVTDAQGEPWFVAADVCAVLELPNTTRALARLDPDEQALISIQG 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLRA 116
G +V +++EP +Y L++ S A++F+RWV EVLP +RKTGSY+ + P L A
Sbjct: 61 ISRGNDQVNVVNEPGLYSLVLGSRKREAKRFKRWVTHEVLPAIRKTGSYTAPSARPTLPA 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV---DQLEAMDIKHLPSSDN 173
+ V + E +AK G+K + + + TG+ A+ + +++
Sbjct: 121 PTQDRVAALLLIGEAVAKVPGVKPGIAMAATLTCIQENTGLAVETLRRALPARDTAANEA 180
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQH 233
L TQ+G L A+ +N+ L GLQ+ + T GE M P
Sbjct: 181 ICSLNATQLGRLLGL--SAKAINQRLAHHGLQLRNERDEWELTEAGEAWAEAM---PYSR 235
Query: 234 VEGSTQQLKWNSNLLVSF 251
S Q+ WN ++
Sbjct: 236 NGHSGYQILWNPLVVERL 253
>gi|190573874|ref|YP_001971719.1| putative phage-like protein [Stenotrophomonas maltophilia K279a]
gi|190011796|emb|CAQ45416.1| putative phage-related protein [Stenotrophomonas maltophilia K279a]
Length = 253
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
MS I PF+FE++ +R VD WF A DV AL N ++AI +H G K +
Sbjct: 1 MSAIIPFQFEAHAVRIQVDGAGLPWFNASDVCNALEMGNPSQAIKSHVDGDDLQKLEVID 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G Q+ ++E +Y L++ ST +A++F+RW+ EVLP +RKTGSY+ + +
Sbjct: 61 NLGRTQRANHVNESGLYALILGSTKDAAKRFKRWLTSEVLPAIRKTGSYAAPSALAALPA 120
Query: 119 A--STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-E 175
V + E +AK G+K + + TG+ + + LPS++
Sbjct: 121 PTHDRVSAILLIGEAVAKVPGVKPGIAAAATLTCIQENTGITT--EVLRRALPSANEPIC 178
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
L TQ+G+ LN + A+ N++L G Q + T GE M P
Sbjct: 179 ALNATQLGKLLN--RSAKATNQMLAAGGFQFRNDRDEWELTEAGEAWAEAM---PYSRNG 233
Query: 236 GSTQQLKWNSNLLVSF 251
S Q+ WN +
Sbjct: 234 HSGYQILWNPAVADEL 249
>gi|304436872|ref|ZP_07396836.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370071|gb|EFM23732.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 250
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 18/259 (6%)
Query: 1 MSTITPFE---FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
M+ + FE F +RT++ D+ +FV KDVA LGY N +AI H +
Sbjct: 1 MNKLQIFESTAF--GTVRTVL-IDKEPYFVGKDVAEILGYTNPQKAIRDHVDDEDRTVNE 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PK 113
K +I+E +Y L+V S LP+A+KF+RWV EVLP +RKTGSY+V PK
Sbjct: 58 SFTVNGTKGLLINESGLYALIVASKLPAAKKFKRWVTSEVLPAIRKTGSYTVPKLEKNPK 117
Query: 114 LRATSASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
R T +R V EL K G+KD L K + + GV+ E ++ P+
Sbjct: 118 YRTRMIGTAVRDVRSTAAELQKLFGVKDGIALAKATSMIERAYGVEMPEVKELIP-PAEH 176
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ 232
+ +L T IG +L A+ N LL GLQ+ K+ +R T KG+ G +M P +
Sbjct: 177 DTGFLNPTAIGAKLGI--SAKDTNLLLKNAGLQM-KIGKEWRITNKGKNYGEEM---PYE 230
Query: 233 HVEGSTQQLKWNSNLLVSF 251
S Q++WN +++
Sbjct: 231 RNGHSGYQIRWNESVVEVL 249
>gi|116492795|ref|YP_804530.1| phage-encoded protein [Pediococcus pentosaceus ATCC 25745]
gi|116102945|gb|ABJ68088.1| Uncharacterized phage-encoded protein [Pediococcus pentosaceus ATCC
25745]
Length = 267
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/249 (32%), Positives = 130/249 (52%), Gaps = 17/249 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F FE N++RT++ D +FV KDVATA+GY+N+ +AI H K R + T
Sbjct: 1 MNELQNFNFEGNEVRTVLIND-EPYFVGKDVATAIGYQNTRKAIKDHVKTKYMREERIVT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G Q + +ISEP +Y+L +S LP+A+ F+ W++EEVLP++RK G+Y + A +
Sbjct: 60 PSGTQTMTVISEPGIYQLAGQSKLPTAEPFQDWIYEEVLPSIRKHGAYMTDEKIEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + L+ ++ ++ N L+ R V++L+ + N +T
Sbjct: 120 PDTIISLATQLKNEREKVEVERNGRLIAEQR-------VEELQPKADYYDQILSNKGVVT 172
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
+T I + A LNKLL + G+Q S+ SG + K ++ G VP H +G
Sbjct: 173 VTSIAKNYG--MTAPELNKLLNRLGVQYSQ-SGSWYLYKKYQKNGYTHTIPVPYSHRDGR 229
Query: 238 T---QQLKW 243
Q KW
Sbjct: 230 PDIKPQTKW 238
>gi|108763205|ref|YP_630118.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
gi|108467085|gb|ABF92270.1| putative bacteriophage L54a, antirepressor [Myxococcus xanthus DK
1622]
Length = 270
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ F+FES+ +R + D WFVAKD+A +L Y +++ + + ++T+
Sbjct: 1 MNQPVAFDFESHHVRVVTDAHGEHWFVAKDIAESLEYRMASDLTRVLATDEVRTHDVRTD 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTL------PSAQKFERWVFEEVLPTLRKTGSYSVE-APK 113
G +++ IISEP +YR + + ++F RWV VLP++RKTGSY+ AP
Sbjct: 61 AGTREMSIISEPGLYRAIFAAKPHSHEKAEKVERFRRWVTHTVLPSIRKTGSYTAPGAPS 120
Query: 114 LRATSASTVLRVHKHLEELAKQA----GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ + ++V HLE A GLK + + TG+ +E K LP
Sbjct: 121 PQPRPSPLQVQVLAHLEVARTLASFVPGLKPELAAACALDAIHRDTGL-TMEPHR-KGLP 178
Query: 170 -SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
+++ L TQ+G++L AR +N L GLQ + T G E
Sbjct: 179 AAAEPPARLNATQLGQKLGL--SARKMNLRLAACGLQGRNEREEWELTDAGREYAEA--- 233
Query: 229 VPMQHVEGSTQQLKWNSNLL 248
VP + QL W +L
Sbjct: 234 VPFSRNGHAAYQLLWRPEVL 253
>gi|299530348|ref|ZP_07043773.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
gi|298721719|gb|EFI62651.1| hypothetical protein CTS44_06218 [Comamonas testosteroni S44]
Length = 255
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 129/250 (51%), Gaps = 7/250 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS ITPF F+ + + I D D ++ FVA +VA LGY ++ E K+
Sbjct: 1 MSNITPFVFDGHNVTVIADDDGSLRFVAMEVADILGYSDAYEMTKRLDDDE-KQNRHIAG 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + V II+E +Y ++ S+ P A+ F++WV EVLP++RKTGSY+ + + +
Sbjct: 60 FGPRGVTIITESGLYDAILGSSKPEAKPFQKWVRAEVLPSIRKTGSYTTKVATTPLKATA 119
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS-SDNDEYLTI 179
R L +A+ G N + N+ + ++T ++ ++ + HL + S ++ T
Sbjct: 120 DAARAFAPLVRVARLLGCDKNAAAISANQAIYQMTSINLMQQLGHTHLEAESQEGQWYTP 179
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG-ST 238
T++G+ + AR N LL + GLQ+ K+ + T G++ ++ D +H G S
Sbjct: 180 TELGKVIG--ASARGTNLLLAEAGLQM-KLGEKWEATDAGKDF-CRLFDTGKKHGSGVSV 235
Query: 239 QQLKWNSNLL 248
Q+KW+ ++
Sbjct: 236 TQMKWSRTVI 245
>gi|257879465|ref|ZP_05659118.1| BRO [Enterococcus faecium 1,230,933]
gi|257881736|ref|ZP_05661389.1| BRO [Enterococcus faecium 1,231,502]
gi|257890224|ref|ZP_05669877.1| BRO [Enterococcus faecium 1,231,410]
gi|260558840|ref|ZP_05831029.1| anti-repressor protein [Enterococcus faecium C68]
gi|293560440|ref|ZP_06676932.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|293570339|ref|ZP_06681398.1| phage anti-repressor protein [Enterococcus faecium E980]
gi|294621638|ref|ZP_06700803.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|257813693|gb|EEV42451.1| BRO [Enterococcus faecium 1,230,933]
gi|257817394|gb|EEV44722.1| BRO [Enterococcus faecium 1,231,502]
gi|257826584|gb|EEV53210.1| BRO [Enterococcus faecium 1,231,410]
gi|260075299|gb|EEW63612.1| anti-repressor protein [Enterococcus faecium C68]
gi|291598803|gb|EFF29855.1| phage anti-repressor protein [Enterococcus faecium U0317]
gi|291605588|gb|EFF35030.1| phage anti-repressor protein [Enterococcus faecium E1162]
gi|291609585|gb|EFF38848.1| phage anti-repressor protein [Enterococcus faecium E980]
Length = 258
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 20/225 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 1 MNTPQIFNFEQNEVRTILVND-EPYFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G +++ II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y A +
Sbjct: 60 SGQSREMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATQLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I+QI + +NKLL K G+Q KV + K +G
Sbjct: 166 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMNQG 207
>gi|314950087|ref|ZP_07853373.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
gi|313643528|gb|EFS08108.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
Length = 261
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 20/225 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 4 MNTPQIFNFEQNEVRTILVND-EPYFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G +++ II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y A +
Sbjct: 63 SGQSREMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 123 PDTIIQLATQLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 168
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I+QI + +NKLL K G+Q KV + K +G
Sbjct: 169 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMNQG 210
>gi|160946092|ref|ZP_02093306.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
gi|158447824|gb|EDP24819.1| hypothetical protein PEPMIC_00041 [Parvimonas micra ATCC 33270]
Length = 255
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 25/260 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F+ N++RTI+ KD WFVAKDV L N A+ ++ L +
Sbjct: 1 MNQLKVFGFKQNEVRTIL-KDGEPWFVAKDVCEILEITNPTMALQRLDDDERAKFNLGRQ 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + I++EP +Y L++ S P A++F+RW+ EV+P +RKTGSYS+
Sbjct: 60 G---ETNIVNEPGLYTLILGSRKPEAKEFKRWITHEVIPAIRKTGSYSI---MDSYAIDD 113
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ R + +EE ++ LK L+L +VN K + D + N L+
Sbjct: 114 PIERAKRWIEEEQERQKLKTENLVLTQQVNELQPKASYYDLI----------LQNKSLLS 163
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
IT+I + LNK L + G+Q + + K +++G + + +
Sbjct: 164 ITKIAKDYG--MSGMALNKKLHELGVQYKQ-GDIWLLYAKYQDKGYTQTTTHVIDADKAR 220
Query: 239 QQLKWNSN---LLVSFLQNE 255
KW + L+NE
Sbjct: 221 VSTKWTQKGRLFIYELLKNE 240
>gi|289566846|ref|ZP_06447256.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|294616694|ref|ZP_06696464.1| phage anti-repressor protein [Enterococcus faecium E1636]
gi|289161377|gb|EFD09267.1| prophage antirepressor [Enterococcus faecium D344SRF]
gi|291590448|gb|EFF22187.1| phage anti-repressor protein [Enterococcus faecium E1636]
Length = 248
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RTI+ D +FV KDVA LGY N +AI H K
Sbjct: 1 MNTPQIFNFEQNEVRTILVND-EPYFVGKDVADVLGYSNPQKAIRDHVDLEDKTQNDSFT 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V +I+E +Y L++KS LPSA+KF+RWV EVLPT+RKTGSYS S +
Sbjct: 60 VNGTAVVLINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKTGSYS-----NVPQSFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
LR+ LEE K+ L ++ KI+ +D + + + +
Sbjct: 115 QALRLAADLEE-------KNQLLEQQIAEYEPKISYLDTILSSTDT----------VATS 157
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI A LNKLL + G+Q KVSG + K +G
Sbjct: 158 QIAADYG--MSAIALNKLLNELGVQ-HKVSGQWILYRKHMNQG 197
>gi|261208361|ref|ZP_05923011.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|260077422|gb|EEW65141.1| anti-repressor protein [Enterococcus faecium TC 6]
Length = 251
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RTI+ D +FV KDVA LGY N +AI H K
Sbjct: 4 MNTPQIFNFEQNEVRTILVND-EPYFVGKDVADVLGYSNPQKAIRDHVDLEDKTQNDSFT 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V +I+E +Y L++KS LPSA+KF+RWV EVLPT+RKTGSYS S +
Sbjct: 63 VNGTAVVLINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKTGSYS-----NVPQSFA 117
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
LR+ LEE K+ L ++ KI+ +D + + + +
Sbjct: 118 QALRLAADLEE-------KNQLLEQQIAEYEPKISYLDTILSSTDT----------VATS 160
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI A LNKLL + G+Q KVSG + K +G
Sbjct: 161 QIAADYG--MSAIALNKLLNELGVQ-HKVSGQWILYRKHMNQG 200
>gi|224475960|ref|YP_002633566.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420567|emb|CAL27381.1| putative antirepressor, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 255
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE +RT++ D +FV KDVA LGY N+ +A+N H K+
Sbjct: 1 MSELQVFNFEELPVRTLIMDD-EPYFVGKDVAEVLGYSNTRDALNKHVDEDDKKILTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ ++ +
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSKVLPAIRKHGIYATDSVIEQ 119
Query: 116 A-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ ++ + ++ + + + Q V+ K T D + N
Sbjct: 120 TIQNPDYIINILTEFKKEREGRLVAEQQ----VHELKPKATYYDLV----------LQNK 165
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
L++++I + AR LNKLL + G+Q + K +++G
Sbjct: 166 SLLSVSKIAKDYG--MSARALNKLLHELGVQYKH-GDIWLLYAKHQDKGYTHTSTYALDE 222
Query: 235 EGSTQQLKW 243
E S KW
Sbjct: 223 EHSKVTTKW 231
>gi|14251162|ref|NP_116530.1| hypothetical protein BK5-Tp38 [Lactococcus phage BK5-T]
gi|928839|gb|AAA98590.1| unknown [Lactococcus phage BK5-T]
gi|26005559|emb|CAC80179.1| hypothetical protein [Lactococcus phage BK5-T]
Length = 266
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 122/229 (53%), Gaps = 21/229 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F F + +RT++ D WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MNELQNFNFNNLPVRTVLIND-EPWFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+RK G+Y +A +
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRKHGAYMTDAKLEEVLLN 119
Query: 119 ASTVLRVHKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
T++ + L+E +QA L +++QL L++ K T +D + +
Sbjct: 120 PDTLINLATQLKE-ERQARLGLEKENSQLNLELAAATEKTTYLDLILEIPDD-------- 170
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ ITQI + A LN++L + +Q KV+ + + +G
Sbjct: 171 --ILITQIAQDYGF--SAVKLNRILNELRIQ-RKVNKQWVLYSRYMGKG 214
>gi|294619297|ref|ZP_06698766.1| phage anti-repressor protein [Enterococcus faecium E1679]
gi|291594457|gb|EFF25865.1| phage anti-repressor protein [Enterococcus faecium E1679]
Length = 301
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+T F F ++RT++ D +FV KDVA LGYE ++ A+ H + + +
Sbjct: 44 MNTPQIFNFGQQEVRTVLLND-EPYFVGKDVAEILGYERADNAVRNHVDEEDRLMHRISA 102
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G + + II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y A +
Sbjct: 103 SGQNRNMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 162
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 163 PDTIIQLATKLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 208
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQHVE 235
I+QI + +NKLL K G+Q KV + K +G ++P
Sbjct: 209 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMRQGYTKSHTTEIPKSDGG 265
>gi|313123987|ref|YP_004034246.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280550|gb|ADQ61269.1| anti-repressor-like protein [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 259
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKTE 60
+ + F FES+ +R +++ D WFV KDVA LGY N +A+ H R + T
Sbjct: 3 NGVQTFNFESSPVR-VIEIDNEPWFVGKDVAKVLGYSNPQKALRDHVDEEDSRGERIVTP 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
GIQ ++I+E +Y L++ S LP+A+KF+RWV VLP++RK G ++ E +
Sbjct: 62 SGIQTTKVINESGLYSLILSSKLPTAKKFKRWVTSVVLPSIRKHGMFATEKTIDQMLEDP 121
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+++RV ++E + L + K + K D + N + +
Sbjct: 122 DSMIRVLTEMKEERAKRRLAEE----KAAKLEPKAKFCDVV----------LQNPALVNV 167
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
T I + A+ +NKLL G+Q + + K + G
Sbjct: 168 TVIAKDYG--MSAQAMNKLLENLGVQY-NQNKVWFLYAKYQSNG 208
>gi|254975131|ref|ZP_05271603.1| prophage antirepressor [Clostridium difficile QCD-66c26]
gi|255314258|ref|ZP_05355841.1| prophage antirepressor [Clostridium difficile QCD-76w55]
gi|255516937|ref|ZP_05384613.1| prophage antirepressor [Clostridium difficile QCD-97b34]
gi|255650040|ref|ZP_05396942.1| prophage antirepressor [Clostridium difficile QCD-37x79]
gi|260686783|ref|YP_003217916.1| hypothetical protein CDR20291_1419 [Clostridium difficile R20291]
gi|306519575|ref|ZP_07405922.1| hypothetical protein CdifQ_05352 [Clostridium difficile QCD-32g58]
gi|260212799|emb|CBE03962.1| putative uncharacterized protein [Clostridium difficile R20291]
Length = 269
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 21/250 (8%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F+ ++ +IR +++ + WFV KD+A LGY+++++A+ H K +
Sbjct: 1 MNNLQIFKNKTFGEIR-VIELNGEFWFVGKDIAEQLGYKDTSDALKRHVDDEDKGVGEIP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
T GG Q +++I+E +Y L++ S LPSA+ F+RWV E+LP++R TG+Y ++ T
Sbjct: 60 TPGGNQNMKVINESGLYSLILSSKLPSAKLFKRWVTNEILPSIRSTGTYNMIDLQTKLPT 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ L+ E+ +Q L+ + K D + N +
Sbjct: 120 TYKEALQHLIEQVEVNEQLQLESKMKDQVIKELKPKADYTDMI----------LKNKGLV 169
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEG 236
TITQI + + +NK+L +RG+Q + SG + + + +G + + G
Sbjct: 170 TITQIAKDYG--MSGKEMNKILHERGIQYKQ-SGQWLLYKQHQGKGYTHSETIDITRSNG 226
Query: 237 STQ---QLKW 243
KW
Sbjct: 227 MPDVKMTTKW 236
>gi|257885097|ref|ZP_05664750.1| BRO [Enterococcus faecium 1,231,501]
gi|257820949|gb|EEV48083.1| BRO [Enterococcus faecium 1,231,501]
Length = 258
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+T F FE N++RTI+ D +FV KDVA+ LGY N+ +A++ H K + T
Sbjct: 1 MNTPQIFSFEQNEVRTILVND-EPYFVGKDVASVLGYSNTKDALSRHVDLEDKMGSRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G +++ II+E +Y L++KS L +A+KF+RWV EVLP +RK G Y A +
Sbjct: 60 SGQSREMTIINESGLYSLILKSKLSNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATKLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQHVE 235
I+Q+ + +NKLL K G+Q KV + K +G ++P
Sbjct: 166 ISQVAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMRQGYTKSHTTEIPKSDGG 222
>gi|325661340|ref|ZP_08149966.1| hypothetical protein HMPREF0490_00699 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472289|gb|EGC75501.1| hypothetical protein HMPREF0490_00699 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 275
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 21/251 (8%)
Query: 3 TITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ FE E ++RTIV + WFV KDVA ALGY N A+ H K ++
Sbjct: 21 ELKIFENEEFGQVRTIVINN-EPWFVGKDVAEALGYANPKNAVPKHVLDEDKLSTQIEYA 79
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR----A 116
G + V +I+E +Y L+ S L SA++F+ WV EVLP++RKTG+Y +LR
Sbjct: 80 GQRRTVTVINESGLYALIFGSKLESAKRFKHWVTSEVLPSIRKTGNYISNEDQLRLGLFD 139
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
V++ H+ L + I ++ H + D+
Sbjct: 140 KDPLVVVQSHQKLVAIEVDRA------------TAPLIAENTVMKPKADYHDEVLNKDDL 187
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER-GGKMCDVPMQHVE 235
+ T I + L A+ LN ++ + SG + P E D +VE
Sbjct: 188 INTTVIAKDLGLRSAAK-LNNIMHSNNIIYKNSSGTWCPYADYEWLITENYADYKSYNVE 246
Query: 236 GSTQQLKWNSN 246
S LKW
Sbjct: 247 NSNPCLKWTEK 257
>gi|261207383|ref|ZP_05922070.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|289566797|ref|ZP_06447209.1| antirepressor [Enterococcus faecium D344SRF]
gi|260078443|gb|EEW66147.1| anti-repressor protein [Enterococcus faecium TC 6]
gi|289161424|gb|EFD09312.1| antirepressor [Enterococcus faecium D344SRF]
Length = 261
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+T F F ++RT++ D +FV KDVA LGYE ++ A+ H + + +
Sbjct: 4 MNTPQIFNFGQQEVRTVLLND-EPYFVGKDVAEILGYERADNAVRNHVDEEDRLMHRISA 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G + + II+E +Y L++KS LPSA+KF+RWV EVLP +RK G Y A +
Sbjct: 63 SGQNRNMTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + L Q K+ KI+ +D + L S+D+ +T
Sbjct: 123 PDTIIQLATQLKE-ERIGRLIAEQ---KIAEYEPKISYLDSI-------LSSTDS---VT 168
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQHVE 235
I+QI + +NKLL K G+Q KV + K +G ++P
Sbjct: 169 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMRQGYTKSHTTEIPKSDGG 225
>gi|257899103|ref|ZP_05678756.1| BRO [Enterococcus faecium Com15]
gi|257837015|gb|EEV62089.1| BRO [Enterococcus faecium Com15]
Length = 260
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 22/227 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT++ + +FV KDVA LGY +S+ A++ + + L +
Sbjct: 1 MNTPQIFNFEQNEVRTVLVNN-EPYFVGKDVAEILGYSDSSSAVSKNVDNEDRTTLLLEQ 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
G K II+E +Y L++KS LPSA+KF+RWV EVLPT+RK G Y A
Sbjct: 60 AGSNYKSKTTIINESGLYSLILKSKLPSAKKFKRWVTSEVLPTIRKHGGYLTPEKVEEAL 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ T++++ L+E + + K+ KI+ +D + L S+D+
Sbjct: 120 LNPDTIIQLATQLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS--- 165
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+TI+QI + +NKLL K G+Q KV + K +G
Sbjct: 166 VTISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMNQG 209
>gi|227875065|ref|ZP_03993210.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35243]
gi|304390308|ref|ZP_07372261.1| Bro family antirepressor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|306817352|ref|ZP_07451097.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
gi|227844343|gb|EEJ54507.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35243]
gi|304326064|gb|EFL93309.1| Bro family antirepressor [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304649793|gb|EFM47073.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
Length = 254
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 84/259 (32%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F + IRTI D I F KDVATALGY++ A+ HCKGVA +PL+T
Sbjct: 3 NQIQTFTNDVFGTIRTIT-NDGQILFCGKDVATALGYQDPTNAVKLHCKGVANYHPLETA 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ+VR I+E D+YRL++ S LP+AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 62 GGIQQVRFITEGDLYRLIISSKLPAAQKFEAWVFDEVLPTIRRHGMYAYDELLADDEFLE 121
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + + L Q LL+ K++ D + +D LT T
Sbjct: 122 HAIATLR----AERAKRLAAEQSLLEA---APKVSYYDVV----------LQSDSLLTTT 164
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
I + A+ LN++L +Q + SG + K E+G +
Sbjct: 165 AIAKDYGL--SAKKLNRILRDAHVQFHQ-SGRWFLYAKYAEQGYTQSKTHEYDEGQTRTH 221
Query: 241 LKWNSN---LLVSFLQNEL 256
+ W + L+N+L
Sbjct: 222 MYWTQKGRLFIYDLLKNKL 240
>gi|293572132|ref|ZP_06683139.1| phage anti-repressor protein [Enterococcus faecium E980]
gi|291607786|gb|EFF37101.1| phage anti-repressor protein [Enterococcus faecium E980]
Length = 248
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 117/223 (52%), Gaps = 26/223 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT ++ D +FVA DVA LGY+N ++A N HCK K + +
Sbjct: 1 MNTPQIFNFEQNEVRTFLEND-IPYFVANDVAKTLGYKNPSDATNKHCKKAVKTWGSDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS S +
Sbjct: 60 GRRQSFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-----NVPQSFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
LR+ LEE K+ L ++ KI+ +D + + + +
Sbjct: 115 QALRLAADLEE-------KNQLLEQQIAEYEPKISYLDTILSSTDT----------VATS 157
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI A LNKLL + G+Q KVSG + K +G
Sbjct: 158 QIAADYG--MSAIALNKLLNELGVQ-HKVSGQWILYRKHMNQG 197
>gi|257891044|ref|ZP_05670697.1| BRO [Enterococcus faecium 1,231,410]
gi|257894297|ref|ZP_05673950.1| BRO [Enterococcus faecium 1,231,408]
gi|260562313|ref|ZP_05832827.1| anti-repressor protein [Enterococcus faecium C68]
gi|257827404|gb|EEV54030.1| BRO [Enterococcus faecium 1,231,410]
gi|257830676|gb|EEV57283.1| BRO [Enterococcus faecium 1,231,408]
gi|260073237|gb|EEW61578.1| anti-repressor protein [Enterococcus faecium C68]
Length = 248
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 117/223 (52%), Gaps = 26/223 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE N++RT ++ D +FVA DVA LGY+N ++A N HCK K + +
Sbjct: 1 MNTPQIFNFEQNEVRTFLEND-IPYFVANDVAKTLGYKNPSDATNKHCKKAVKTWGSDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS S +
Sbjct: 60 GRRQSFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-----NVPQSFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
LR+ LEE K+ L ++ KI+ +D + + + +
Sbjct: 115 QALRLAADLEE-------KNQLLEQQIAEYEPKISYLDTILSSTDT----------VATS 157
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI A LNKLL + G+Q KVSG + K +G
Sbjct: 158 QIAADYG--MSAIALNKLLNELGVQ-HKVSGQWILYRKHMNQG 197
>gi|256851403|ref|ZP_05556792.1| prophage antirepressor [Lactobacillus jensenii 27-2-CHN]
gi|260660825|ref|ZP_05861740.1| prophage antirepressor [Lactobacillus jensenii 115-3-CHN]
gi|282933147|ref|ZP_06338534.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|256616465|gb|EEU21653.1| prophage antirepressor [Lactobacillus jensenii 27-2-CHN]
gi|260548547|gb|EEX24522.1| prophage antirepressor [Lactobacillus jensenii 115-3-CHN]
gi|281302651|gb|EFA94866.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
Length = 258
Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--- 57
M+ + F F IRT+ D +FV KDVA LGY+NS + + H K+ +
Sbjct: 1 MTDLQIFNFNGTDIRTLT-IDNEPYFVGKDVAKVLGYKNSRDTLMKHVDEEDKKDGVAIR 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ G Q I+E +Y L++ S LP+A+KF+ WV EVLP +RK G Y + A
Sbjct: 60 DSIGRNQSAVAINESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGGYLTDEKIEEAL 119
Query: 118 -SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ T++++ L+E + + + Q V K + +D++ A N E
Sbjct: 120 YNPDTLIKLATQLKEEREGRLIAEQQ----VAELKPKASYLDEILA----------NKEL 165
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+T++ I + A NKLL +Q + + + G
Sbjct: 166 ITVSVIAKDYG--MSAMQFNKLLHNLKVQFKQ-GKSWLLYSNYQSLG 209
>gi|312873812|ref|ZP_07733856.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
gi|311090693|gb|EFQ49093.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
Length = 252
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ I F FE+N++RT ++ D +FV KD+A LGY N +A+ AH K
Sbjct: 4 NKIQIFNFENNEVRT-LNIDGKPYFVGKDIAAVLGYSNPQKALRAHVDEEDKTVNESFTV 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAS 120
K +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y + +
Sbjct: 63 NGTKAVLINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVYMTDDVIEKVIKDPD 122
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
++++ L+E + + + Q V K T D + N L++T
Sbjct: 123 FIIKLATELKEEKTKRLVAEQQ----VYELKPKATYYDLV----------LQNKSLLSVT 168
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI + + A++LN+ L + G+Q + S + K ++G
Sbjct: 169 QIAKDYG--KSAKWLNEKLHELGMQYKQGS-TWLLYQKYADKG 208
>gi|224541900|ref|ZP_03682439.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
gi|224525134|gb|EEF94239.1| hypothetical protein CATMIT_01073 [Catenibacterium mitsuokai DSM
15897]
Length = 244
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-PLKT 59
M+ + F FESN +R +++D WFVAKD A LGY+N +AI+ H K T
Sbjct: 1 MNEVQLFNFESNSVRA-LERDGQAWFVAKDAAKTLGYKNPRDAISKHVDEEDKEVAKCDT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + II+E +Y L++ S LPSA+KF+RWV EVLP LRKTG Y V+ + A
Sbjct: 60 LGGRQDIAIINESGLYSLVLSSKLPSAKKFKRWVTSEVLPALRKTGQYQVKELSGQELMA 119
Query: 120 STVLRVH-------KHLEELAKQAGLKDN------QLLLKVNRGVTKITGVDQLEAMDIK 166
++ K +EE+ +A D +L+ + K G+D M K
Sbjct: 120 KALIEAQSVLAAKDKQIEEMKPKALFADAVTASHTSILVGELAKILKQNGID----MGQK 175
Query: 167 HLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSK-----VSGGYRPTPKGE 220
L + ++ I + G N P Q+A L +K G V+ + + T KG+
Sbjct: 176 RLFAWLREKGYLIKRQGTDYNMPTQKAMELGLFEIKEGSYVNGSGVNITTKTPKITGKGQ 235
Query: 221 ER 222
+
Sbjct: 236 QY 237
>gi|261366474|ref|ZP_05979357.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571744|gb|EFB77279.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 247
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/250 (29%), Positives = 107/250 (42%), Gaps = 23/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F+ E IR + + D W V KDVA ALGY+N EAI H K +
Sbjct: 1 MNQMEIFKNPEFGAIRAV-EIDGEPWLVGKDVALALGYKNPQEAIRNHVDAEDKGVSEIL 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-AT 117
T GGIQK+ II+E +Y L++ S LP A++F RWV EVLP++R+ G+Y AT
Sbjct: 60 TPGGIQKLPIINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRQHGAYLTREKLWEVAT 119
Query: 118 SASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
S +L++ L E K A L+ + L+ K D +D++H
Sbjct: 120 SPEALLKLCSDLLAEREKNAALQADNARLQ-----GKAVYYDLF--IDLRH--------S 164
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
+ + L P+ R + LL+R SG P K G C
Sbjct: 165 TNLRTTAKELEVPE--RRFVRFLLERRYVYRAPSGCVLPYAKSANEG-LFCVKDFCRNGH 221
Query: 237 STQQLKWNSN 246
+
Sbjct: 222 TGSYTLVTPK 231
>gi|69244685|ref|ZP_00602949.1| BRO, N-terminal [Enterococcus faecium DO]
gi|258615809|ref|ZP_05713579.1| prophage antirepressor [Enterococcus faecium DO]
gi|68196276|gb|EAN10705.1| BRO, N-terminal [Enterococcus faecium DO]
Length = 248
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 84/223 (37%), Positives = 118/223 (52%), Gaps = 26/223 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+T F FE +++RT ++ D +FVA DVA LGY+N ++A N HCK + + +
Sbjct: 1 MNTPQIFSFEQHEVRTFLEND-IPYFVANDVAKTLGYKNPSKATNDHCKKSIETWGNDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G QK ++I E DVYRL++KS LPSA+KFE WV EEVLPT+RKTGSYS S +
Sbjct: 60 GRRQKFKVIPESDVYRLIIKSNLPSAEKFEAWVMEEVLPTIRKTGSYS-----NVPQSFA 114
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
LR+ LEE K+ L ++ KI+ +D + + + +
Sbjct: 115 QALRLAADLEE-------KNQLLEQQIAEYEPKISYLDTILSSTDT----------VATS 157
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI A LNKLL + G+Q KVSG + K +G
Sbjct: 158 QIAADYG--MSAIALNKLLNELGVQ-HKVSGQWILYRKHMNQG 197
>gi|314948564|ref|ZP_07851944.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
gi|313645061|gb|EFS09641.1| toxin-antitoxin system, toxin component, Bro family [Enterococcus
faecium TX0082]
Length = 258
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+T F FE +++RT+ D +FV KDVA LGY+N + IN H ++ Y T
Sbjct: 1 MNTPQIFNFEQHEVRTVTIHD-EPFFVGKDVAKVLGYQNGSRDINRHVDVEDRQNYQNGT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+ + II+E +Y L++ S P+A+KF+RWV EVLP +RK G Y A +
Sbjct: 60 FESPRGLTIINESGLYSLILGSKQPNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATKLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQHVE 235
I+QI + +NKLL K G+Q KV + K +G ++P
Sbjct: 166 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMRQGYTKSHTTEIPKSDGG 222
>gi|257881838|ref|ZP_05661491.1| BRO [Enterococcus faecium 1,231,502]
gi|257817496|gb|EEV44824.1| BRO [Enterococcus faecium 1,231,502]
Length = 258
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+T F FE +++RT+ D +FV KDVA LGY+N + IN H ++ Y T
Sbjct: 1 MNTPQIFNFEQHEVRTVTIHD-EPFFVGKDVAKVLGYQNGSRDINRHVDVEDRQNYQNGT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+ + II+E +Y L++ S P+A+KF+RWV EVLP +RK G Y A +
Sbjct: 60 FESPRGLTIINESGLYSLILGSKQPNAKKFKRWVTSEVLPAIRKHGGYLTPEKVEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L+E + + K+ KI+ +D + L S+D+ +T
Sbjct: 120 PDTIIQLATKLKEERTGRLIAEQ----KIAEYEPKISYLDSI-------LSSTDS---VT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQHVE 235
I+QI + +NKLL K G+Q KV + K +G ++P
Sbjct: 166 ISQIAADYG--MSPQQMNKLLHKLGIQ-KKVGNQWLLCKKHMRQGYTKSHTTEIPKSDGG 222
>gi|288904646|ref|YP_003429867.1| prophage antirepressor [Streptococcus gallolyticus UCN34]
gi|288731371|emb|CBI12922.1| putative prophage antirepressor [Streptococcus gallolyticus UCN34]
Length = 258
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F ++RT+ D WFVA DVA LGY N +A++ H K
Sbjct: 1 MNEI--FNFHGQEVRTVTV-DNEPWFVANDVANVLGYANQRDALSKHVDDEDKITLTSQN 57
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
++ + I+E +Y L++ S LP A+ F+RWV EVLPT+RK G Y+V+
Sbjct: 58 ATLENIPNRGLSAINESGLYSLILSSKLPQAKDFKRWVTSEVLPTIRKHGMYAVDDLLDN 117
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
A + K L QA + Q + K T D + ++
Sbjct: 118 PDMAIATFKRLKEERRLRLQAQEEVAQKNQMIQELQPKATYYDLI----------LQSES 167
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ I+ I + A+ LN LL + +Q + S + K ++G
Sbjct: 168 LVAISVIAKDYG--MSAKKLNNLLHELKVQFKQGS-TWLLYQKYADKG 212
>gi|315656934|ref|ZP_07909821.1| Bro family antirepressor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492889|gb|EFU82493.1| Bro family antirepressor [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 254
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 25/259 (9%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F + IRTI D I F KDVATALGY++ A+ HCKGVA +PL+T
Sbjct: 3 NQIQTFTNDVFGTIRTITT-DGQILFCGKDVATALGYQDPTNAVKLHCKGVANYHPLETA 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ+VR I+E ++YRL++ S LP+AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 62 GGIQQVRFITEGNLYRLIISSKLPAAQKFEAWVFDEVLPTIRRHGMYAYDELLADDEFLE 121
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + K + K++ D + +D LT T
Sbjct: 122 HAIATL-------RAERAKRLAAEQALLEAAPKVSYYDLV----------LQSDSLLTTT 164
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
I + A+ LN++L +Q + S + K E+G +
Sbjct: 165 AIAKDYGL--SAKKLNRILRDAHVQFHQ-SDRWFLYAKYAEQGYTQSKTHEYGEGQTRTH 221
Query: 241 LKWNSN---LLVSFLQNEL 256
+ W + L+N+L
Sbjct: 222 MYWTQKGRLFIYDLLKNQL 240
>gi|295090215|emb|CBK76322.1| Prophage antirepressor [Clostridium cf. saccharolyticum K10]
Length = 245
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IRT ++D + F KDVA ALGY +AI AHCKGV P +
Sbjct: 1 MNQMEIFKNPEFGSIRT-FEQDGKVLFCGKDVAQALGYRRPADAIAAHCKGV-CVLPTPS 58
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATS 118
GGIQ+++ I E DVYRL+V S LPSA++FERWVF+EVLP++R+ G+Y ATS
Sbjct: 59 NGGIQQMKFIPEGDVYRLIVHSKLPSAERFERWVFDEVLPSIRQHGAYLTREKLWEVATS 118
Query: 119 ASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+L++ L E K A L+ + L+ K D +D++H
Sbjct: 119 PEALLKLCSDLLAEREKNAALQADNARLQ-----GKAVYYDLF--IDLRH--------ST 163
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
+ + L P+ R + LL+R SG P K G C +
Sbjct: 164 NLRTTAKELEVPE--RRFVRFLLERRYVYRAPSGCVMPYAKSANDG-LFCVKDFCRNGHT 220
Query: 238 TQQLKWNSN 246
Sbjct: 221 GSYTLVTPK 229
>gi|300764695|ref|ZP_07074686.1| hypothetical protein LMHG_11073 [Listeria monocytogenes FSL N1-017]
gi|300514581|gb|EFK41637.1| hypothetical protein LMHG_11073 [Listeria monocytogenes FSL N1-017]
Length = 269
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + FE E +RT++ D FV KDVA+ LGY N +A+ H K
Sbjct: 14 MNELKVFENAEFGSVRTVMIGD-VPHFVGKDVASILGYTNPQKALRDHVDEEDKTVNESF 72
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+I+E +Y L++ S +P+A+KF+RWV EVLP++R+ G Y+ E ++
Sbjct: 73 SVNGTMAILINESGLYSLIISSKMPNAKKFKRWVTNEVLPSIRQHGVYATEDFITKSIED 132
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + V K L+E + ++ +L K++ D + N+ ++
Sbjct: 133 PAWAISVLKQLQEKKEMVAMQQQMIL----EMKPKVSYYDLI----------LQNNSVMS 178
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I++I + ++ +NKLL + G+Q + + K +G
Sbjct: 179 ISKISKDYG--MSSQAMNKLLHELGIQYKQ-GKMWLLYQKYANQG 220
>gi|150388676|ref|YP_001318725.1| prophage antirepressor [Alkaliphilus metalliredigens QYMF]
gi|149948538|gb|ABR47066.1| prophage antirepressor [Alkaliphilus metalliredigens QYMF]
Length = 276
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 26/251 (10%)
Query: 1 MS-TITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPL 57
M+ + FE E ++R ++ +D WFV KD+A +LGY+N ++A+ H K
Sbjct: 1 MNKQLQVFEKEEFGQVR-VLRQDGQPWFVGKDIADSLGYKNPSDALLKHVDEEDKALAKC 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRA 116
T GG Q++ II+E +Y L++ S LP+A++F+RWV EVLP++++ G Y + +
Sbjct: 60 DTLGGTQQMTIINESGLYGLILSSKLPNAKRFKRWVTSEVLPSIQRHGVYMTPDKIEEVL 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ ++ + L+ + ++ K Q++ ++ K +D++ N
Sbjct: 120 LNPDMIIGLATKLK-VEQELSKKQQQIIGELK---PKADYMDKI----------LKNKGL 165
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
+TITQI + +A +N LL +Q + SG + RG + + +
Sbjct: 166 VTITQIAKDYGMSGQA--MNDLLHSLRVQYKQ-SGQWLLYRAHHGRGYTHSETIDILRSD 222
Query: 236 GSTQQL---KW 243
G+ KW
Sbjct: 223 GNLDIKMNTKW 233
>gi|167039880|ref|YP_001662865.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300915306|ref|ZP_07132620.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307724796|ref|YP_003904547.1| prophage antirepressor [Thermoanaerobacter sp. X513]
gi|166854120|gb|ABY92529.1| prophage antirepressor [Thermoanaerobacter sp. X514]
gi|300888582|gb|EFK83730.1| prophage antirepressor [Thermoanaerobacter sp. X561]
gi|307581857|gb|ADN55256.1| prophage antirepressor [Thermoanaerobacter sp. X513]
Length = 263
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ IT F +E N +RT++ KD N W+V KDV + L NS + + + T
Sbjct: 1 MNKITLFNYEGNTVRTVM-KDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----PKLRA 116
GG Q+V II+E +Y +++ S P A+KF+RWV EVLP++R+ G Y+ + P
Sbjct: 60 GGKQEVSIINESGLYSVILVSRKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLI 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ + EL +++ Q+ K + D + + +
Sbjct: 120 QALQELKAERAKNAELTTTISIQEQQI----AEMKPKASYYDVV----------LNCKDA 165
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
++IT I + + R+ N+ L G+Q + + K + G
Sbjct: 166 VSITTIAKDYG--KSGRWFNEYLHNLGVQFRQ-GKIWLLYQKYAQHG 209
>gi|218665269|ref|YP_002425545.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517482|gb|ACK78068.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 313
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 51/300 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + PFE+E IR I ++ W+VA DV ALG +++ A+ + K T
Sbjct: 1 MQNVIPFEYEGRDIRVIPGENGEPWWVAVDVCRALGLVDASVAMRKLDEDE-KTTLCLTP 59
Query: 61 GGIQK----------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G +++ + +++EP +YRL++ S P A F+RWV EVLP +RKTG Y
Sbjct: 60 GHVKQGLSDNAPGTSLNLVNEPGLYRLILTSRKPEAHAFKRWVTHEVLPMIRKTGKYETS 119
Query: 111 APKLR-----ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV-------D 158
+ + V R+H + +AK + + + V + GV D
Sbjct: 120 PAQPKYARFADVDWPAVARMHAAYKRVAKSRKIPVAAQVTVADLAVELLIGVPLRAIISD 179
Query: 159 QLEAMDIKHLPSSD------------------------NDEYLTITQIGERLNPPQRARF 194
+ + P++D + L ++ +G L
Sbjct: 180 AIAQLGDLTEPTTDVRTKAGPSEHVAIDSIQETDVRLSPEATLNVSDLGALLG-GYTGIA 238
Query: 195 LNKLLLKRGLQVSKVSGG---YRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
N+LL G QV G + PT KG K+ QL W + +L +
Sbjct: 239 FNRLLYGLGYQVRHTIRGKSEWHPTEKGTPFAVKIFVPRTGGRGADVPQLLWKAGILDAL 298
>gi|291544662|emb|CBL17771.1| Prophage antirepressor [Ruminococcus sp. 18P13]
Length = 273
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 28/260 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ I F ++RT+ D +FV KDVA LGY N N+AI H K+
Sbjct: 1 MNEIEIFTNPAFGEVRTLT-IDSKPYFVGKDVAEILGYSNVNKAIQRHVDDEDKKTLDYK 59
Query: 56 -------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
L II+E +Y L++ S LP+A+KF+ WV ++LPT+R+ G+Y
Sbjct: 60 GFSHFGTTLWGSNDFSNKTIITESGLYSLILSSKLPTAKKFKHWVTADILPTIRQHGAYM 119
Query: 109 VEAPKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
+ +A TS ++++ + L++ ++ + + ++ + + +L+
Sbjct: 120 TKDVLEKALTSPDFLMQLAQQLKDEQEKRAALETTVAVQDQQ-------IKELKPKADYT 172
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKM 226
N + ITQI + LN +L + G+Q +SG + + + +G
Sbjct: 173 DSILRNKGLVAITQIAKDYG--MSGNKLNSMLHEYGVQYL-LSGQWLLYSQYQGKGYTHS 229
Query: 227 CDVPMQHVEGSTQQL---KW 243
V + H +G KW
Sbjct: 230 ETVDITHSDGRKDIKMITKW 249
>gi|312872362|ref|ZP_07732432.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2062A-h1]
gi|311092185|gb|EFQ50559.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2062A-h1]
Length = 254
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ I F FE+N+IR ++ D +FV KDVA LGY N ++A+ H K
Sbjct: 5 NEIQIFNFENNEIRA-LNIDDKPYFVGKDVADILGYANPSKALADHVDEEDKLNNDSLLS 63
Query: 62 -GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
G + +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y + +
Sbjct: 64 LGQRGGWLINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVYMTDDVIEKVIKDP 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
++++ L+E + + + Q V K T D + N L++
Sbjct: 124 DFIIKLATELKEEKTKRLVAEQQ----VYELKPKATYYDLV----------LQNKSLLSV 169
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
TQI + + A++LN+ L + G+Q + S + K ++G
Sbjct: 170 TQIAKDYG--KSAKWLNEKLHELGMQYKQGS-TWLLYQKYADKG 210
>gi|125624905|ref|YP_001033388.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493713|emb|CAL98701.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071704|gb|ADJ61104.1| putative phage antirepressor protein [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 252
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 19/240 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M+ + F F + +RT++ D WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MNELQNFNFNNLPVRTVLIND-EPWFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+RK G+Y +A S
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRKHGAYMTDAKAQDVISG 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVN--------------RGVTKITGVDQLEAMDI 165
+ + + KQ L+ +Q+ K R + KI + ++ +
Sbjct: 120 NGLADLLLQAGNQIKQLELEKSQMKPKALFADSVSASKNTILIRDLAKILKQNGIDIGE- 178
Query: 166 KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG-GYRPTPKGEERG 223
K L + D + +IG N P QR+ L L V TPK +G
Sbjct: 179 KRLFTWLRDNGYLVKKIGSDYNSPTQRSMNLGILEFTENTHVHNSGKITVTKTPKVTGKG 238
>gi|312868619|ref|ZP_07728813.1| BRO family, N-terminal domain protein [Lactobacillus oris
PB013-T2-3]
gi|311095828|gb|EFQ54078.1| BRO family, N-terminal domain protein [Lactobacillus oris
PB013-T2-3]
Length = 264
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-- 62
F F+ ++RT+ D +FV KDVA LGY++ N AIN H ++ + G
Sbjct: 4 QLFNFKGQQVRTVT-IDGEPYFVGKDVAEILGYKDLNRAINQHVDSDDRKALSRKNSGDS 62
Query: 63 ---------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+I+E VY L+ S LP A++F+ WV EVLP +RK G+Y A
Sbjct: 63 YATLWSLNDWTNKVVITESGVYSLIFSSELPQAKEFKHWVTSEVLPAIRKHGAYMTSAKI 122
Query: 114 LRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T T++++ L++ + + + KVN K T D++ A
Sbjct: 123 EEVLTDPDTIIQLATQLKQEREGRLIAEQ----KVNELTPKATYYDKVLA---------- 168
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ +TITQI + RA +NK L + + + + K ++ G
Sbjct: 169 DKSLVTITQIAKDYGMSGRA--MNKKLHELKVIYKQ-GQTWLLYAKYQKTG 216
>gi|238855028|ref|ZP_04645357.1| prophage antirepressor [Lactobacillus jensenii 269-3]
gi|282934068|ref|ZP_06339348.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|313472087|ref|ZP_07812579.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 1153]
gi|238832399|gb|EEQ24707.1| prophage antirepressor [Lactobacillus jensenii 269-3]
gi|281301870|gb|EFA94134.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|313449066|gb|EFR61324.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 1153]
Length = 283
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 102/269 (37%), Gaps = 37/269 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +RT++ D +FV KDVA LGY N+ +A+ H K+ +
Sbjct: 1 MNNLQIFNFNGLDVRTVL-IDGEPYFVGKDVAEVLGYRNTRDALKKHVDNEDKKSEIVNS 59
Query: 61 G-------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G Q + +I+E VY L+ S LP+A+KF+ WV EVLP +R+ G+Y +
Sbjct: 60 SQLSQNATGYQNIDLITESGVYSLIFGSKLPTAKKFKHWVTSEVLPAIREHGAYMTDEKA 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA----------- 162
+ + L++ A Q KD Q+ K D +
Sbjct: 120 FDVVNNKA--GLADLLQQAADQLKQKDIQI----AEMKPKALFADSVATSNSTILVGELA 173
Query: 163 ---------MDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSG 211
+ L I++ G N P Q++ L +K + S S
Sbjct: 174 KILRGNGIEIGQNRLFDWLRKNGYLISKKGSSYNLPTQKSMNLGLFKIKETTINHSNGSV 233
Query: 212 GYRPTPKGEERGGKMCDVPMQHV-EGSTQ 239
T K +G + + E S
Sbjct: 234 SISKTAKVTGKGQQYFINKFLNAEEHSGY 262
>gi|228937940|ref|ZP_04100567.1| hypothetical protein bthur0008_6160 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970820|ref|ZP_04131460.1| hypothetical protein bthur0003_6070 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977394|ref|ZP_04137789.1| hypothetical protein bthur0002_6090 [Bacillus thuringiensis Bt407]
gi|228782371|gb|EEM30554.1| hypothetical protein bthur0002_6090 [Bacillus thuringiensis Bt407]
gi|228788945|gb|EEM36884.1| hypothetical protein bthur0003_6070 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821731|gb|EEM67732.1| hypothetical protein bthur0008_6160 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938419|gb|AEA14315.1| hypothetical protein CT43_CH0623 [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 265
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F + KD +F A DVA LGY N ++AI HCK + T
Sbjct: 1 MTKMQTFAHNMFGNLEVFIKDGKEYFPATDVAKVLGYTNPHKAIRDHCKQEGVNETLVPT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATS 118
G Q + I+EP++YRL+ KS LP A++FE+WVFEEVLP++RK G+Y
Sbjct: 61 NSGKQMKKFINEPNLYRLIAKSKLPQAEQFEKWVFEEVLPSIRKHGAYMTPHTINALLQD 120
Query: 119 ASTVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
++ + L ++ + A K+ L +V +KIT +DQ+ + +
Sbjct: 121 PDLLIGLASQLKQEQQARQVAEQKNLMLTQQVAEHASKITYLDQI----------LQSKD 170
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHV 234
+T++QI A LNK+L +Q KV+ + K + +G K + + H
Sbjct: 171 TVTVSQIAADYGL--SAVRLNKILKDEKIQY-KVNNQWLLYAKHQNKGYTKSQTIDVTHS 227
Query: 235 EGS 237
+GS
Sbjct: 228 DGS 230
>gi|169334329|ref|ZP_02861522.1| hypothetical protein ANASTE_00727 [Anaerofustis stercorihominis DSM
17244]
gi|169259046|gb|EDS73012.1| hypothetical protein ANASTE_00727 [Anaerofustis stercorihominis DSM
17244]
Length = 237
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPL 57
M+ I FE E ++R+++ D +FV KDVA LGY A+ H K+ +
Sbjct: 1 MNEIKIFENSEFGRVRSLM-IDNEPYFVGKDVAEILGYAKPLNALANHIDEYDSLKQGLI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ G Q+ I+E +Y L++ S LPSA+KF+RWV EVLP++RKTG Y P
Sbjct: 60 DSMGRTQETIFINESGLYSLILSSKLPSAKKFKRWVTSEVLPSIRKTGEYKTTEPIKEML 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + + + G + + R + + L + LP + Y
Sbjct: 120 AEAKLRNARAREASIWLKIG---QNIKSEDYRQICSSYASEALAGSAVIPLPEV-RETYY 175
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
T TQ+G+ L A + ++ + L+ S+ Y K K DV + EG
Sbjct: 176 TATQLGDMLGI--SANRIGRIANEHKLKTSRFGKWYHDKGKNS---SKEVDVFRYNSEGL 230
Query: 238 TQQLKW 243
Q K+
Sbjct: 231 EQIKKY 236
>gi|228902050|ref|ZP_04066214.1| hypothetical protein bthur0014_32290 [Bacillus thuringiensis IBL
4222]
gi|228857476|gb|EEN01972.1| hypothetical protein bthur0014_32290 [Bacillus thuringiensis IBL
4222]
Length = 265
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 19/243 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F + KD +F A DVA LGY N ++AI HCK + T
Sbjct: 1 MTKMQTFAHNMFGNLEVFIKDGKEYFPATDVAKVLGYTNPHKAIRDHCKQEGVNETLVPT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATS 118
G Q + I+EP++YRL+ KS LP A++FE+WVFEEVLP++RK G+Y
Sbjct: 61 NSGKQMKKFINEPNLYRLIAKSKLPQAEQFEKWVFEEVLPSIRKHGAYMTPHTINALLQD 120
Query: 119 ASTVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
++ + L ++ + A K+ L +V +KIT +DQ+ + +
Sbjct: 121 PDLLIGLASQLKQEQQARQVAEQKNLMLTQQVAEHASKITYLDQI----------LQSKD 170
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHV 234
+T++QI A LNK+L +Q KV+ + K + +G K + + H
Sbjct: 171 TVTVSQIAADYGL--SAVRLNKILKDEKIQY-KVNNQWLLYAKHQNKGYTKSQTIDVTHS 227
Query: 235 EGS 237
+GS
Sbjct: 228 DGS 230
>gi|303229286|ref|ZP_07316081.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
atypica ACS-134-V-Col7a]
gi|302516059|gb|EFL58006.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
atypica ACS-134-V-Col7a]
Length = 256
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ ++ ++R I++KD +WFVAKDVA LGY+N + +N H + +
Sbjct: 1 MTDLQIFKNDTFGQVR-ILEKDNELWFVAKDVADTLGYQNGSRDVNRHTDEEDRTKTMVF 59
Query: 60 EG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+G ++ +I+E +Y L++ S LP+A++F+RWV EV+P +RKTG+YS+ PK S
Sbjct: 60 DGNQNKETILINESGLYSLVLSSKLPTAKQFKRWVTSEVIPQIRKTGAYSMNIPK----S 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
LR + + E Q ++ VD++ + LT
Sbjct: 116 LPEALRAYANEVESHNATKAIVAQQEQQIAEFKPVKDYVDKI----------LSSKSCLT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
ITQI A+ LNK+L + GLQ KV + + +G K +G
Sbjct: 166 ITQIAADYG--MSAQELNKILHEAGLQ-RKVGDQWILYKQHMSKGFTKSETFTFCRSDGR 222
Query: 238 TQQL---KW 243
KW
Sbjct: 223 LDSKITTKW 231
>gi|66396351|ref|YP_240708.1| ORF019 [Staphylococcus phage 88]
gi|62636766|gb|AAX91877.1| ORF019 [Staphylococcus phage 88]
Length = 254
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 24/249 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ ++ +FV KDVA LGY+N + INAH K Y + T
Sbjct: 1 MQALQTFNFEELPVRTLTV-NEEPYFVGKDVADILGYKNGSRDINAHVDAEDKLTYQIST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G + II+E +Y L+ S L SA++F+RWV +VLP +RK G Y+ + +
Sbjct: 60 AGQRRNQTIINESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATDNVIEQTLKD 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++ V ++ +Q + L ++ K VD++ + L
Sbjct: 120 PDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGTLA 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
TQI A+ LNKLL + LQ KV+ + + + + +P+ +G
Sbjct: 166 TTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIPIVRSDGR 222
Query: 238 TQ---QLKW 243
Q +W
Sbjct: 223 EDTVLQTRW 231
>gi|189427129|ref|YP_001949805.1| putative anti-repressor protein [Staphylococcus phage phiMR25]
gi|189339040|dbj|BAG48104.1| putative anti-repressor protein [Staphylococcus phage phiMR25]
Length = 255
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 24/249 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT+ ++ +FV KDVA LGY+N + INAH K Y + T
Sbjct: 1 MQALQTFNFEELPVRTLTV-NEEPYFVGKDVADILGYKNGSRDINAHVDAEDKLTYQIST 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G + II+E +Y L+ S L SA++F+RWV +VLP +RK G Y+ + +
Sbjct: 60 AGQRRNQTIINESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATDNVIEQTLKD 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++ V K+ ++ L ++ K VD++ + L
Sbjct: 120 PDYIITVLTEY----KKEKERNLLLQQEIGELKPKADYVDEI----------LKSTGTLA 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
TQI A+ LNKLL + LQ KV+ + + + + +P+ +G
Sbjct: 166 TTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIPIVRSDGR 222
Query: 238 TQ---QLKW 243
Q +W
Sbjct: 223 EDTVLQTRW 231
>gi|282934410|ref|ZP_06339674.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|281301531|gb|EFA93811.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
Length = 268
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 30/258 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
MS + F F IRT+ D+ +FV KDVA LGY+N+ +A+ H KR + T
Sbjct: 1 MSELQIFNFNGENIRTLT-IDEEPYFVGKDVAEVLGYKNTKDALIRHVADDDKRGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q + +ISE +Y L++ S LP+A+KF+ WV EVLP +RK G+Y + +
Sbjct: 60 PSGRQTMTVISESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVVNN 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD--------------- 164
+ + L++ A+Q KD Q+ K D + D
Sbjct: 120 KS--GLADLLQQAAEQLKQKDIQI----AELKPKALFADSVATSDSTILVGELAKILRGN 173
Query: 165 -----IKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSGGYRPTP 217
L I++ G N P Q++ L +K + S S T
Sbjct: 174 GIEIGQNRLFDWLRTNGYLISKKGSSYNLPTQKSMNLGLFKIKETTINHSNGSVSISKTA 233
Query: 218 KGEERGGKMCDVPMQHVE 235
K +G + +
Sbjct: 234 KVTGKGQQYFINKFLNCG 251
>gi|294795001|ref|ZP_06760136.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
gi|294454363|gb|EFG22737.1| toxin-antitoxin system, toxin component, Bro family [Veillonella
sp. 3_1_44]
Length = 256
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F ++ ++R I++KD +WFVAKDVA LGY+N + +N H + +
Sbjct: 1 MTDLQIFNNDTFGQVR-ILEKDNELWFVAKDVADTLGYQNGSRDVNRHTDEEDRTKTMVF 59
Query: 60 EG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+G ++ +I+E +Y L++ S LP+A++F+RW+ EV+P +RKTG+YS+ PK S
Sbjct: 60 DGNQNKETILINESGLYSLVLSSKLPTAKQFKRWITSEVIPQIRKTGAYSMNIPK----S 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
LR + + E Q ++ VD++ + LT
Sbjct: 116 LPEALRAYANEVESHNATKAIVAQQEQQIAEFKPVKDYVDKI----------LSSKSCLT 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
ITQI A+ LNK+L + GLQ KV + + +G K +G
Sbjct: 166 ITQIAADYG--MSAQELNKILHEAGLQ-RKVGDQWILYKQHMSKGFTKSETFTFCRSDGR 222
Query: 238 TQQL---KW 243
KW
Sbjct: 223 LDSKITTKW 231
>gi|23455724|ref|NP_695033.1| antirepressor [Lactococcus phage r1t]
gi|1353522|gb|AAB18680.1| ORF5 [Lactococcus phage r1t]
Length = 265
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 22/229 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
M + F F + +RT++ D WFV KDVA A+GY+N +A+ +H K KR + T
Sbjct: 1 MKELQNFNFNNLPVRTVLIND-EPWFVGKDVAIAIGYKNFRDALKSHVKDKYKRESRITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G+Q V +ISEP +Y+L +S LPSA+ F+ WV+EEVLPT+R T Y +A +
Sbjct: 60 PSGVQSVTVISEPGLYQLAGESKLPSAEPFQDWVYEEVLPTIRST-EYMTDAKLEEVLLN 118
Query: 119 ASTVLRVHKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
T++ + L+E +QA L +++QL +++ K T +D +
Sbjct: 119 PDTLINLATQLKE-ERQARLGLEKENSQLNIELAAATEKTTYLDLILESPDD-------- 169
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ ITQI + A N++L + +Q KV+ + + +G
Sbjct: 170 --ILITQIAQDYGF--SAVKFNRILNELRIQ-RKVNKQWVLYSRYMGKG 213
>gi|312898469|ref|ZP_07757859.1| toxin-antitoxin system, toxin component, Bro family [Megasphaera
micronuciformis F0359]
gi|310620388|gb|EFQ03958.1| toxin-antitoxin system, toxin component, Bro family [Megasphaera
micronuciformis F0359]
Length = 256
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 19/260 (7%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F E +R I D + V KDVA LGY ++++A+ H K
Sbjct: 1 MNELQVFNNAEFGSVR-ITVIDGEPFLVGKDVAEILGYRDTSDALKRHVDEEDKLTRCFT 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +++ II+E +Y L+++S LP A+KF+RWV EVLP +R+ G Y+++
Sbjct: 60 DSGQNREMYIINESGLYSLILRSQLPKARKFKRWVTSEVLPAIRRHGMYAIDEILENPDL 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A L K E K+ L ++ K + D + N +
Sbjct: 120 AIAALTQLKEERERRKELELTTAIQNQQIAELKPKASYYDLI----------LQNRNTVP 169
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
+TQI + R N+LL G+Q K + + G E S
Sbjct: 170 VTQIAKDYG--MSGRRFNELLHDLGIQY-KFRKTWLLYQHYADLGYTQSKTFAIDAEKSV 226
Query: 239 QQLKWNSN---LLVSFLQNE 255
W L L+NE
Sbjct: 227 MHTYWTQKGRLFLYDLLKNE 246
>gi|50843068|ref|YP_056295.1| Bro family antirepressor [Propionibacterium acnes KPA171202]
gi|50840670|gb|AAT83337.1| putative antirepressor (Bro family) [Propionibacterium acnes
KPA171202]
gi|313813470|gb|EFS51184.1| BRO family protein [Propionibacterium acnes HL025PA1]
gi|315106935|gb|EFT78911.1| BRO family protein [Propionibacterium acnes HL030PA1]
Length = 253
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/241 (32%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 4 ITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ F E IRTI I F KDVATALGY N+ +A+ HCKGV YPL+T GG
Sbjct: 5 LQVFTNHEFGTIRTITSS-GQILFCGKDVATALGYANTKDALARHCKGVVNHYPLETAGG 63
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
+Q+VR ISE D+YRL+V S LP+AQKFE WVF+EVLPT+R+ G Y+++
Sbjct: 64 VQQVRFISEGDLYRLIVTSKLPAAQKFETWVFDEVLPTIRRHGIYAIDELLADDEFLERA 123
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
+ + K + K++ D + A +T T+I
Sbjct: 124 ITTL-------RAERAKRLAAEQALLEAAPKVSYYDIVLAS----------PSLITATEI 166
Query: 183 GERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLK 242
+ A+ LN++L + +Q + SG + K E+G + +
Sbjct: 167 AKDYGL--SAKKLNQILREEQVQFHQ-SGRWFLYAKFAEQGYTQSKTHEYDEGKTRTHMY 223
Query: 243 W 243
W
Sbjct: 224 W 224
>gi|160884995|ref|ZP_02065998.1| hypothetical protein BACOVA_02991 [Bacteroides ovatus ATCC 8483]
gi|156109345|gb|EDO11090.1| hypothetical protein BACOVA_02991 [Bacteroides ovatus ATCC 8483]
Length = 269
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 21/252 (8%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ IT F+ E ++RT + F A DVA ALGY N+ +AI+ HCK V KR +
Sbjct: 1 MNEITIFKNERFGEVRTATSESGEPLFAAVDVARALGYANTRDAISKHCKRVTKRDGVSR 60
Query: 60 EGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ I+E DV RL+++S LP A+ F+ WV EE+LP++RK G+Y
Sbjct: 61 TTNQHGVVTNQVVEMSFINEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAYMTPE 120
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
++ + ++++ L+ +Q LL+ R ++ ++
Sbjct: 121 TVVQMFQNPDALIQLLTTLKSEQEQ------NALLRAQRE-ANAKAIEAMQPKAEYFDTV 173
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
+ +T I +L A+ LNK L + G+Q + SG Y +G +
Sbjct: 174 LSSSSLITTNTIAAKLGI--SAQRLNKFLCESGIQYKQ-SGLYFLYSDLRGKGLEGYQT- 229
Query: 231 MQHVEGSTQQLK 242
+ T ++K
Sbjct: 230 FARTDSRTGEIK 241
>gi|308180883|ref|YP_003925011.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308046374|gb|ADN98917.1| hypothetical protein LPST_C1701 [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 250
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 26/247 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ITPF FE +++RTI +++ IWF D++ +LG NS+ AI + ++ L
Sbjct: 1 MNQITPFNFEGHQVRTI-ERENIIWFAMPDISKSLGLSNSSVAIKSLDNDEVTKFNLGGL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G ISEP +Y+L+ S P A++F RWV VLP++RK G Y + T
Sbjct: 60 SG--NTNFISEPGLYKLIGASRKPEAKRFNRWVTHNVLPSIRKNGVYMTDQTAYDITHDK 117
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L +L +AG + Q L + + D + A N TI+
Sbjct: 118 ------DALGDLLLKAGSQLKQKDLVIRELKPQADYTDSMLA----------NKGLETIS 161
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGSTQ 239
I + R NKLL G+Q + + K ++ G + + +G Q
Sbjct: 162 MIAKNYGY--STREFNKLLHGLGIQYKQ-GKTWLLYAKYQDEGYTHVEPYEYTNSDGIKQ 218
Query: 240 ---QLKW 243
+KW
Sbjct: 219 VRNTMKW 225
>gi|307700655|ref|ZP_07637683.1| BRO family, N-terminal domain protein [Mobiluncus mulieris
FB024-16]
gi|307614185|gb|EFN93426.1| BRO family, N-terminal domain protein [Mobiluncus mulieris
FB024-16]
Length = 255
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 22/223 (9%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
ST+ F + +IRTI D I F +DVA+ALGY N N+A+ HCKGV RYPL+T
Sbjct: 4 STLQVFTNSQFGQIRTIT-NDGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETS 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ++R I+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y+++
Sbjct: 63 GGIQQIRFITEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAIDELLENDELLE 122
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L + +K + K++ D + + + IT
Sbjct: 123 QAL-------TRLRAERVKRLAAEQALLEAAPKVSYYDIV----------LQSPSLMPIT 165
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + A+ LN+LL +Q + SG + + + G
Sbjct: 166 AIAKDYGL--SAKKLNRLLADEHIQFKQ-SGIWYLYAEYAKCG 205
>gi|306818119|ref|ZP_07451850.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
gi|304649083|gb|EFM46377.1| Bro family antirepressor [Mobiluncus mulieris ATCC 35239]
Length = 267
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 22/223 (9%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
ST+ F + +IRTI D I F +DVA+ALGY N N+A+ HCKGV RYPL+T
Sbjct: 16 STLQVFTNSQFGQIRTIT-NDGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETS 74
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ++R I+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y+++
Sbjct: 75 GGIQQIRFITEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAIDELLENDELLE 134
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L + +K + K++ D + + + IT
Sbjct: 135 QAL-------TRLRAERVKRLAAEQALLEAAPKVSYYDIV----------LQSPSLMPIT 177
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + A+ LN+LL +Q + SG + + + G
Sbjct: 178 AIAKDYGL--SAKKLNRLLADEHIQFKQ-SGIWYLYAEYAKCG 217
>gi|269976757|ref|ZP_06183732.1| Bro family antirepressor [Mobiluncus mulieris 28-1]
gi|269934954|gb|EEZ91513.1| Bro family antirepressor [Mobiluncus mulieris 28-1]
Length = 255
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 114/223 (51%), Gaps = 22/223 (9%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
ST+ F + +IRTI D I F +DVA+ALGY N N+A+ HCKGV RYPL+T
Sbjct: 4 STLQVFTNSQFGQIRTIT-NDGTIMFCGRDVASALGYTNPNKAVQDHCKGVPFRYPLETS 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ++R I+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y+++
Sbjct: 63 GGIQQIRFITEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAIDELLENDELLE 122
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L + +K + K++ D + + + IT
Sbjct: 123 QAL-------TRLRAERVKRLAAEQALLEAAPKVSYYDIV----------LQSPSLMPIT 165
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + A+ LN+LL +Q + SG + + + G
Sbjct: 166 AIAKDYGL--SAKKLNRLLADEHIQFKQ-SGIWYLYAEYAKCG 205
>gi|260665450|ref|ZP_05866297.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260560718|gb|EEX26695.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 277
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 67/255 (26%), Positives = 104/255 (40%), Gaps = 32/255 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
MS + F F IRT+ D+ +FV KDVA LGY+N+ +A+ H KR + T
Sbjct: 1 MSDLQIFNFSGADIRTLT-IDEEPYFVGKDVAEVLGYKNTKDALIRHVDDDDKRGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q + +ISE +Y L++ S LP+A+KF+ WV EVLP +RK G+Y + +
Sbjct: 60 PSGRQTMIVISESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVVNN 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD--------------- 164
+ + L++ A Q KD Q+ K D + D
Sbjct: 120 KS--GLADLLQQAADQLKQKDIQI----AELKPKALFADSVATSDSTILVGELAKILRGN 173
Query: 165 -----IKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGY--RPT 216
L I++ G N P Q++ L +K ++ +G T
Sbjct: 174 GIEIGQNRLFDWLRTNGYLISKKGSSYNLPTQKSMNLGLFKIKE-TTINHFNGSVSISKT 232
Query: 217 PKGEERGGKMCDVPM 231
K +G +
Sbjct: 233 AKVTGKGQQYFINKF 247
>gi|288870166|ref|ZP_06113150.2| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
gi|288868178|gb|EFD00477.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
Length = 253
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 25/249 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E IRT ++D + F KD+A ALGY+ + +AI AHCKGV P +
Sbjct: 9 MNQMEIFSNQEFGSIRT-FEQDGKVLFCGKDIAKALGYQRTADAITAHCKGV-CVLPTPS 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATS 118
GGIQ+++ I E DVYRL+V S LPSA++FERWVF+EVLP++RK G+Y ATS
Sbjct: 67 NGGIQRMKFIPEGDVYRLIVHSKLPSAERFERWVFDEVLPSIRKHGAYITREKLWEVATS 126
Query: 119 ASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
++++ L E + A L+ +L+ K D +D+KH
Sbjct: 127 PEAMMKLCSDLLAEREENAVLRKENAMLE-----GKAAFYDLF--IDLKH--------ST 171
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP-MQHVEG 236
+ + L P+ R + LL++ SG P K G + V +
Sbjct: 172 NLRTTAKELVVPE--RRFVRFLLEQRFVYRAPSGNVLPYAKPANDG--LFTVKDYCNHGH 227
Query: 237 STQQLKWNS 245
+
Sbjct: 228 TGSYTLVTP 236
>gi|160886636|ref|ZP_02067639.1| hypothetical protein BACOVA_04648 [Bacteroides ovatus ATCC 8483]
gi|156107047|gb|EDO08792.1| hypothetical protein BACOVA_04648 [Bacteroides ovatus ATCC 8483]
Length = 269
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 20/233 (8%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ IT F+ E ++RT + F A DVA ALGY N+ +AI+ HCK V KR +
Sbjct: 1 MNEITIFKNERFGEVRTATSESGEPLFAAVDVARALGYANTRDAISKHCKRVTKRDGVSR 60
Query: 60 EGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ I+E DV RL+++S LP A+ F+ WV EE+LP++RK G+Y
Sbjct: 61 TTNQHGVVTNQVVEMSFINEGDVIRLIMRSKLPQAEAFQDWVCEEILPSIRKHGAYMTPE 120
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
++ + ++++ L+ +Q LL+ R ++ ++
Sbjct: 121 TVVQMFQNPDALIQLLTTLKSEQEQ------NALLRAQRE-ANAKAIEAMQPKAEYFDTV 173
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ +T I +L A+ LNK L + G+Q + SG Y +G
Sbjct: 174 LSSSSLITTNTIAAKLGI--SAQRLNKFLCESGIQYKQ-SGLYFLYSDLRGKG 223
>gi|19745758|ref|NP_606894.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|139474141|ref|YP_001128857.1| putative phage antirepressor protein [Streptococcus pyogenes str.
Manfredo]
gi|306827713|ref|ZP_07460986.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
gi|19747899|gb|AAL97393.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|134272388|emb|CAM30644.1| putative phage antirepressor protein [Streptococcus pyogenes str.
Manfredo]
gi|304430099|gb|EFM33135.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
Length = 253
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 27/270 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLK 58
M I F F+ ++RT+ D +FV KDVA LGY + AI +H K+
Sbjct: 1 MQEI--FNFKGQEVRTVTIDD-EPYFVGKDVAEILGYAKARNAIASHVDDEDKKDAPIQG 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q + II+E +Y L++ S LP A++F+RWV EVLPT+RK G Y+ + +
Sbjct: 58 TLGGTQTMTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPTIRKHGMYATDELL---DN 114
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + L+E + L + Q+ + +R K+ D + A L
Sbjct: 115 PDFAIATLQKLKEEREAKKLLEAQI--EADR--PKVLFADAVSASHTSIL-------VGE 163
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQHVEGS 237
+ ++ ++ A L L K G + + + PT K E G + V + S
Sbjct: 164 LAKLLKQNGVNIGATRLFTWLRKHGYLIKRNGRDWNMPTQKSVELG--LIRVKETSITHS 221
Query: 238 TQQLKWNSNLLVS-----FLQNELINTPRL 262
+ + LV+ + N+ +N L
Sbjct: 222 DGHITVSKTPLVTGKGQQYFINKFLNQEYL 251
>gi|257866260|ref|ZP_05645913.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257873224|ref|ZP_05652877.1| prophage antirepressor [Enterococcus casseliflavus EC10]
gi|257800218|gb|EEV29246.1| prophage antirepressor [Enterococcus casseliflavus EC30]
gi|257807388|gb|EEV36210.1| prophage antirepressor [Enterococcus casseliflavus EC10]
Length = 257
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 114/240 (47%), Gaps = 23/240 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--K 58
M+ + F FE+N++RT++ D +FV KD+A LGY N+ +A++ H K
Sbjct: 6 MNQLEIFNFENNEVRTVLVDD-EPYFVGKDIAEVLGYINTRDALSKHVDLEDKHRVAIRD 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q V I+E +Y L++ S LP+A+KF+RWV +EVLP++RK G Y+ +
Sbjct: 65 TIGRSQNVVAINESGLYSLIISSKLPNAKKFKRWVTKEVLPSIRKHGMYAKDELVNNPEL 124
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
VL ++ +E K+ L+ ++ ++ +++ ++E LT
Sbjct: 125 FLEVLDNYRAEKE-------KNKMLVTELKETQPIVSYYNEI----------LQSNETLT 167
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
ITQI RA +N+LL + +Q KV+ + +G + T
Sbjct: 168 ITQIAADYGMSGRA--MNQLLKRLRVQ-RKVNNQWVLFSDLVRKGLTRSETKRVQNGNKT 224
>gi|325956990|ref|YP_004292402.1| prophage antirepressor [Lactobacillus acidophilus 30SC]
gi|325333555|gb|ADZ07463.1| prophage antirepressor [Lactobacillus acidophilus 30SC]
Length = 269
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 18/247 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M I F+FE N++RT+ D +FV KDVA LGY N+ +A+ H K+ +
Sbjct: 1 MEEIKLFKFEGNEVRTLKIND-EPYFVGKDVAEILGYSNTRKALQDHVDLEDKKDGVTIR 59
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
G Q+ II+E +Y L++ S +P+A++F+RWV EVLP +RK G+Y +
Sbjct: 60 DSIGRSQRPTIINESGLYSLILSSKMPNAKRFKRWVTSEVLPAIRKHGAYMTDEKIEEVL 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T T++++ L++ +Q L + QL V + ++ + + +
Sbjct: 120 TDPDTIIKLATQLKD-ERQQRLIEQQLRRDAESQVHE------MKPKALFADSVATSKST 172
Query: 177 LTITQIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQ 232
+ I ++ + L A L + + + G +++ + PT + G + +
Sbjct: 173 VLIGELAKILRGNGVDIGATRLFRWMREHGYLINRKGSDWNMPTQRSMNLG--LFKIKET 230
Query: 233 HVEGSTQ 239
+ S
Sbjct: 231 TINHSNG 237
>gi|322412205|gb|EFY03113.1| putative antirepressor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 253
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 27/270 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLK 58
M+ I ++F+ ++RT+ D +FV KDVA LGY + AI +H K+
Sbjct: 1 MNEI--YKFKGQEVRTVT-IDNEPYFVGKDVAEILGYAKARNAIASHVDDEDKKDAPIQG 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q + II+E +Y L++ S LP A++F+RWV EVLPT+RK G Y+ + +
Sbjct: 58 TLGGTQTMTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPTIRKHGMYATDELL---DN 114
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + L+E + L + Q+ K+ D + A L
Sbjct: 115 PDFAIATLQKLKEEREAKKLLEAQI----QADRPKVLFADAVSASHASIL-------VGE 163
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQHVEGS 237
+ ++ ++ A L L K G + + + PT K E G + V + S
Sbjct: 164 LAKLLKQNGVNIGATRLFAWLRKHGYLIKRNGRDWNMPTQKSVELG--LIRVKETSITHS 221
Query: 238 TQQLKWNSNLLVS-----FLQNELINTPRL 262
+ + LV+ + N+ +N L
Sbjct: 222 DGHITVSKTPLVTGKGQQYFINKFLNQEYL 251
>gi|66395673|ref|YP_240038.1| ORF017 [Staphylococcus phage 47]
gi|282905889|ref|ZP_06313744.1| antirepressor [Staphylococcus aureus subsp. aureus Btn1260]
gi|282919256|ref|ZP_06326991.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|284024541|ref|ZP_06378939.1| hypothetical protein Saura13_08120 [Staphylococcus aureus subsp.
aureus 132]
gi|62636097|gb|AAX91208.1| ORF017 [Staphylococcus phage 47]
gi|282317066|gb|EFB47440.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|282331181|gb|EFB60695.1| antirepressor [Staphylococcus aureus subsp. aureus Btn1260]
Length = 258
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 28/253 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT+ D +FV KDVA LGY N+ +A++ H K
Sbjct: 1 MQALQTFNFEELPVRTLTV-DNEPYFVGKDVAEILGYSNTRDALSKHVDEDDKEILTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA-PKL 114
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ ++ +
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKHGIYATDSVIEN 119
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ ++ + ++ +Q + L ++ K VD++ +
Sbjct: 120 TLNNPDYIINILTEYKKEKEQ----NLLLQQEMGELKPKADYVDEI----------LKST 165
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQH 233
L TQI A+ LNKLL + LQ KV+ + + + + +P+
Sbjct: 166 GTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIPIVR 222
Query: 234 VEGSTQ---QLKW 243
+G Q +W
Sbjct: 223 SDGREDTVLQTRW 235
>gi|157325452|ref|YP_001468876.1| gp36 [Listeria phage A006]
gi|66733457|gb|AAY53271.1| gp36 [Listeria phage A006]
Length = 257
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ ++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIEN-EPHFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y + +
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYMTNDTIEKA 116
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI---------- 165
T ++R+ +L+E + + +L ++ + + D + I
Sbjct: 117 ITDPDFLIRLATNLKEEKTKRIEAEQRLEIQKPKVMFAEAVSDARGTILIRDLAKLIQQN 176
Query: 166 ------KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
K L I++ G N P Q++ L +K + T K
Sbjct: 177 GIDIGEKRLFEWMRQRGYLISRKGTDYNRPTQKSMELGLFKIKETAIIRSSGAQTAITAK 236
Query: 219 GEERGGKMC 227
+G
Sbjct: 237 VTGKGQLYF 245
>gi|295089924|emb|CBK76031.1| Prophage antirepressor [Clostridium cf. saccharolyticum K10]
Length = 248
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLK 58
MS I F E +++++ F D A ALGY+++ + AHC GVA +
Sbjct: 1 MSQIEVFNNEEFGSIRVIEENGKYLFCGLDAAKALGYKDTVNDLKAHCSKDGVAFYHLTD 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-AT 117
G QKV+ ISE ++YRL+V S LPSA++FERWVF+EVLP++RK G+Y + + AT
Sbjct: 61 NLGRKQKVKFISEGNLYRLIVYSKLPSAERFERWVFDEVLPSIRKHGAYVTKEKLWKVAT 120
Query: 118 SASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
S +L++ L E + A L++ LL+ +K D D +
Sbjct: 121 SPEALLKLCSDLLAEREENAALREENALLE-----SKAAFYDLF----------IDLNHS 165
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
+ + L P+ R + LL++ SG P K G C +
Sbjct: 166 TNLRTTAKELVVPE--RRFVRFLLEQRFVYRTASGNVLPYAKPSNDG-LFCVKDYCNHGH 222
Query: 237 STQQLKWNS 245
Sbjct: 223 FGSYTLVTP 231
>gi|260664103|ref|ZP_05864956.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260561989|gb|EEX27958.1| antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 260
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 34/249 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+F +RT++ D +FV KDV LGY+N+++A+ H K
Sbjct: 11 MNDLQIFKFNGLDVRTVL-IDGEPYFVGKDVTEILGYKNASKALADHVDSEDKLNNETLS 69
Query: 61 G-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + +++E +Y L++ S LP+A+KF+ WV EVLP +RK G+Y + +
Sbjct: 70 SLGQRGGWLVNESGLYSLIISSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVVNN 129
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD--------------- 164
+ + L++ A Q KD Q+ K D + A D
Sbjct: 130 KS--GLADLLQQAADQLKRKDIQI----AEMKPKALFADSVSASDSTILIGDLAKILKAN 183
Query: 165 -----IKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS-----KVSGGY 213
K L D+ I + G N P Q++ L ++K +V+
Sbjct: 184 GVDTGAKRLFQWLRDKSYLINRKGSDWNSPTQKSMNLGLFVIKESTHTQPDGTVRVTKTT 243
Query: 214 RPTPKGEER 222
+ T KG++
Sbjct: 244 KVTGKGQQY 252
>gi|319942638|ref|ZP_08016946.1| hypothetical protein HMPREF9464_02165 [Sutterella wadsworthensis
3_1_45B]
gi|319803817|gb|EFW00749.1| hypothetical protein HMPREF9464_02165 [Sutterella wadsworthensis
3_1_45B]
Length = 256
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 24/217 (11%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH--CKGVAKRYPL 57
M+ I F+FE + +R IV+ + WF A DV ALGY N+ +A+ H KGVAK
Sbjct: 1 MNELIQTFKFEGSNLRVIVE-NGEPWFCAIDVCKALGYSNTRDALRNHTKNKGVAKHDT- 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T+GG+Q + ++E ++YRL+++S L SA++F+ WV EVLPT+RKTGSY
Sbjct: 59 PTKGGVQPLAYLNEGNLYRLIMRSKLESAERFQDWVCGEVLPTIRKTGSYGTRQTPALPD 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + E+ ++ L+ +V + K+ + + A D +H
Sbjct: 119 FTNPAIAARAWAEQYEQRLALE-----AQVKSDMPKVEFAEAVTASDAEH---------- 163
Query: 178 TITQIGERLNPPQRARF----LNKLLLKRGLQVSKVS 210
TIT+ + L+ R F + + K+G Q ++S
Sbjct: 164 TITEAAKVLSIRPRKFFDWLRMGGFIYKQGTQAMQIS 200
>gi|258419948|ref|ZP_05682907.1| phage associated antirepressor [Staphylococcus aureus A9719]
gi|295407535|ref|ZP_06817329.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|297246961|ref|ZP_06930727.1| conserved hypothetical protein [Staphylococcus aureus A8796]
gi|257844073|gb|EEV68463.1| phage associated antirepressor [Staphylococcus aureus A9719]
gi|294967644|gb|EFG43679.1| conserved hypothetical protein [Staphylococcus aureus A8819]
gi|297176205|gb|EFH35505.1| conserved hypothetical protein [Staphylococcus aureus A8796]
Length = 237
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT ++ D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRT-LEVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y V + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQVPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
I ++ N QR+ + +V K++G T
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 200
>gi|307693704|ref|ZP_07635941.1| prophage antirepressor [Ruminococcaceae bacterium D16]
Length = 248
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFCGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y + A
Sbjct: 60 QSPDRKICMTFIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNTG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|16799158|ref|NP_469426.1| hypothetical protein lin0080 [Listeria innocua Clip11262]
gi|224503549|ref|ZP_03671856.1| hypothetical protein LmonFR_13752 [Listeria monocytogenes FSL
R2-561]
gi|16412500|emb|CAC95313.1| lin0080 [Listeria innocua Clip11262]
gi|313633540|gb|EFS00348.1| toxin-antitoxin system, toxin component, Bro family [Listeria
seeligeri FSL N1-067]
Length = 257
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 26/249 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ ++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIEN-EPHFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y + +
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYMTNDTIEKA 116
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI---------- 165
T ++++ +L+E + + +L ++ + + D + I
Sbjct: 117 ITDPDFLIKLATNLKEEKTKRIEAEQRLEIQKPKVMFAEAVSDARGTILIRDLAKLIQQN 176
Query: 166 ------KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
K L I++ G N P Q++ L +K + T K
Sbjct: 177 GIDIGEKRLFEWMRQRGYLISRKGTDYNRPTQKSMELGLFKIKETAIIRSSGAQTAITAK 236
Query: 219 GEERGGKMC 227
+G
Sbjct: 237 VTGKGQLYF 245
>gi|298694368|gb|ADI97590.1| prophage, antirepressor, putative [Staphylococcus aureus subsp.
aureus ED133]
gi|298695205|gb|ADI98427.1| Phage antirepressor protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 237
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT ++ D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRT-LEVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y V + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQVPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
I ++ N QR+ + +V K++G T
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 200
>gi|284024170|ref|ZP_06378568.1| hypothetical protein Saura13_06244 [Staphylococcus aureus subsp.
aureus 132]
Length = 237
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 23/220 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +RT ++ D +F+ KDVA LGY N +A++ H K + T
Sbjct: 1 MQELQTFNFEELPVRT-LEVDGEPYFIGKDVADILGYANGRDALSKHVDAEDKLTSQIAT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V II+E +Y L+ S L +A++F+RWV EVLPTLRKTG+Y + + ++A
Sbjct: 60 AGQNRNVTIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRKTGAYQIPSDPMQA--- 116
Query: 120 STVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
LR+ E KQ +KD+ + LK N+ +L+A D L + N
Sbjct: 117 ---LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLTRTINQRVA 164
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
I ++ N QR+ + +V K++G T
Sbjct: 165 HIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 200
>gi|282600715|ref|ZP_06257707.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571510|gb|EFB77045.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 310
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 22/228 (9%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-- 58
+ I F+ E ++RTI+ WFVA DV AL N ++AI+
Sbjct: 54 NKIEIFKNEQFGEVRTIL-IGGEPWFVAVDVCNALDIGNPSQAISKLDDDEKVTLTTNEG 112
Query: 59 ---TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
GG Q + +ISE +Y L++KS P A+ F+RW+ EV+PT+RKTG Y +
Sbjct: 113 HSGKLGGAQMLNVISEAGLYSLILKSRKPEAKAFKRWITHEVIPTIRKTGGYMTD----- 167
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
S + R+ K + + A L+L+ NR ++ + + + D+
Sbjct: 168 ----SLLERIQKEPAVIMEFAQ----ALILEKNRVKALECELNTAKPKADYYDAFINPDD 219
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + L P+ R + LL+ SG P K G
Sbjct: 220 CTNIRTTAKELKIPE--RKFVQFLLREKYLFRSPSGQLLPYNKDSNAG 265
>gi|41179298|ref|NP_958516.1| putative antirepressor [Lactobacillus prophage Lj928]
gi|42519327|ref|NP_965257.1| Lj928 prophage antirepressor [Lactobacillus johnsonii NCC 533]
gi|38731427|gb|AAR27357.1| putative antirepressor [Lactobacillus prophage Lj928]
gi|41583615|gb|AAS09223.1| Lj928 prophage antirepressor [Lactobacillus johnsonii NCC 533]
Length = 253
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ + F FE+ ++RT+ D+ +FV KDVAT LGY+N + IN H K RY + T
Sbjct: 3 NKLQLFNFENQQVRTLTV-DEEPYFVGKDVATILGYKNGSRDINTHVDEEDKLRYQISTA 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G ++ +I+E +Y L++ S LP+A+KF+RWV EVLP +RK G+Y +
Sbjct: 62 GQMRDQILINESGLYSLILSSKLPNAKKFKRWVTSEVLPAIRKHGAYMTDEKAFD----- 116
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
V+R L +L +QA + Q +++ K D + + I
Sbjct: 117 -VVRNKTGLADLLQQAADQLKQKDIEIAEMKPKALFADSVATSHTT----------ILIG 165
Query: 181 QIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQHVEG 236
++ + L A L + + G +++ + PT K + G + + +
Sbjct: 166 ELAKILRGNGIDIGANRLFAWMREHGYLINRKGSDWNMPTQKSMDLG--LFKIKETTINH 223
Query: 237 STQQL 241
S
Sbjct: 224 SNGST 228
>gi|298253797|ref|ZP_06977386.1| prophage antirepressor [Gardnerella vaginalis 5-1]
gi|297532133|gb|EFH71106.1| prophage antirepressor [Gardnerella vaginalis 5-1]
Length = 263
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F+ E +RT V D +FV KDVA LGY ++++A+ H K
Sbjct: 1 MNELQVFKNVELGSVRTTVV-DGIPYFVGKDVAEILGYRDTSDALKRHVDEDDKLTRCFT 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +++ +I+E +Y L+++S LP A +F+RWV +VLP++RK G Y+ +
Sbjct: 60 DSGQNREMYVINESGLYSLILRSQLPKACQFKRWVTSQVLPSIRKHGMYATDELINNPDM 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLK--VNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
A V K EE AK+ L+ + K + K + D +
Sbjct: 120 AIAVFNALK--EERAKREALELTTAVQKQQIAELKPKASYYDVVLKCKDI---------- 167
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEE 221
+++ I + + A+++N L + G+Q + S + K
Sbjct: 168 ISMRVIAKDYG--KSAQWMNNFLHELGVQYRQ-SDIWLLYQKYAN 209
>gi|219563224|ref|YP_002455816.1| antirepressor [Lactobacillus phage Lv-1]
gi|215536991|gb|ACJ68928.1| antirepressor [Lactobacillus phage Lv-1]
Length = 275
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 98/248 (39%), Gaps = 26/248 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F F +RT++ D +FV KDVA LGY+ A+ H K L
Sbjct: 1 MKDLQIFNFRGLDVRTVL-IDGEPYFVGKDVADVLGYKKPENAVANHVDEEDKTTTLIQG 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
G K I++E +Y L++ S LP+A+KF+ WV EVLP +RK G+Y +
Sbjct: 60 TGSNYKSKTVIVNESGLYSLILSSKLPTAKKFKHWVTSEVLPAIRKHGAYMTDEKAFDVV 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + L++ A Q KD Q+ K D + + +
Sbjct: 120 NNKS--GLADLLQQAADQLKQKDIQI----AEMKPKALFADSVATS----------NSTI 163
Query: 178 TITQIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQH 233
+ ++ + L L L K G +SK Y PT K G + +
Sbjct: 164 LVGELAKILRGNGIEIGQNRLFDWLRKNGYLISKKGSSYNLPTQKSMNLG--LFKIKETT 221
Query: 234 VEGSTQQL 241
+ S +
Sbjct: 222 INHSNGSV 229
>gi|154502963|ref|ZP_02040023.1| hypothetical protein RUMGNA_00784 [Ruminococcus gnavus ATCC 29149]
gi|153796502|gb|EDN78922.1| hypothetical protein RUMGNA_00784 [Ruminococcus gnavus ATCC 29149]
Length = 248
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFCGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y + A
Sbjct: 60 QSPDRKISMTFIPEGDLYRLIVHSKLPSAEQFERWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNAG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|160939356|ref|ZP_02086706.1| hypothetical protein CLOBOL_04249 [Clostridium bolteae ATCC
BAA-613]
gi|158437566|gb|EDP15328.1| hypothetical protein CLOBOL_04249 [Clostridium bolteae ATCC
BAA-613]
Length = 248
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
M+ I F E IR IV+++ F DVA +LGY+++ A+ HC GVA +
Sbjct: 1 MNQIEIFNSPEFGSIR-IVEENGKYLFCGADVAKSLGYKDTVNALKTHCREDGVAFYHLT 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
G QK + ISE ++YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y + A
Sbjct: 60 DNLGREQKAKFISEGNLYRLIVHSKLPSAERFEQWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS +L++ L E + L+ L+ K D ++
Sbjct: 120 TSPEALLKLCSDLLAEREENVSLRIANAQLE-----GKAAFYDLFIDLEHS--------- 165
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+R RF+ LL KR SG P K G C +
Sbjct: 166 -TNLRTTAKELDVPER-RFVRFLLEKR-FVYRTASGNVLPYAKPANEG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLITP 231
>gi|116512815|ref|YP_811722.1| phage-encoded protein [Lactococcus lactis subsp. cremoris SK11]
gi|116108469|gb|ABJ73609.1| Uncharacterized phage-encoded protein [Lactococcus lactis subsp.
cremoris SK11]
Length = 260
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 27/248 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+ + F F + +RT++ D WFV KDVA LGY N+ +A+ H K + T
Sbjct: 1 MNELQNFNFNNLPVRTVLIDD-EPWFVGKDVAKILGYANTKDALLKHVDDEDKLGSQITT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKST--------LPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + +++E +Y L++ ++ A++F+RW+ EVLPT+RK G+Y +A
Sbjct: 60 SGQKRNMVVVNESGLYNLILGASKQGKNQEIKEKARQFKRWITHEVLPTIRKHGAYMTDA 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVN--------------RGVTKITGV 157
S + + + KQ L+ +Q+ K R + KI
Sbjct: 120 KAQDVISGNGLADLLLQAGNQIKQLELEKSQMKPKALFADSVSASENTILIRDLAKILKQ 179
Query: 158 DQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG-GYRP 215
+ ++ + K L + D + +IG N P QR+ L L V
Sbjct: 180 NGIDIGE-KRLFTWLRDNGYLVKKIGSDYNSPTQRSMNLGILEFTENTHVHNSGKITVTK 238
Query: 216 TPKGEERG 223
TPK +G
Sbjct: 239 TPKVTGKG 246
>gi|227543461|ref|ZP_03973510.1| prophage antirepressor [Lactobacillus reuteri CF48-3A]
gi|300910130|ref|ZP_07127590.1| phage antirepressor protein [Lactobacillus reuteri SD2112]
gi|227186549|gb|EEI66620.1| prophage antirepressor [Lactobacillus reuteri CF48-3A]
gi|300892778|gb|EFK86138.1| phage antirepressor protein [Lactobacillus reuteri SD2112]
Length = 255
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 29/270 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F ++RT+ D +FV KDVAT LGY N+ +A++ H K L T
Sbjct: 1 MQQL--FNFNGQQVRTVTIND-EPYFVGKDVATILGYSNTRDALSHHVDDEDKGVAKLDT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
GG Q II+E +Y L++ S LP+A++F+ WV EVLP++RK G+Y +A S
Sbjct: 58 LGGRQNQTIINESGLYSLILGSKLPTAKEFKHWVTSEVLPSIRKHGAYMTPQTIEKALLS 117
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + L+E +Q + +Q++ + S ++ +
Sbjct: 118 PDTIINLATQLKEEQEQRKHLQEE--------------NEQMKPKALFADAVSTSNSSIL 163
Query: 179 ITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
I Q+ + L N+L + K G ++ S PT + + G + +
Sbjct: 164 IGQLAKILRQNGVNIGQNRLFAWMRKNGYLGTRGSNRNVPTQRSMDLG--LFKTKETVIN 221
Query: 236 GSTQQLKWNSNLLVS-----FLQNELINTP 260
S N V+ + N+ +N P
Sbjct: 222 HSDGHTTVNITTKVTGKGQQYFINKFLNAP 251
>gi|227496445|ref|ZP_03926729.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
gi|226834027|gb|EEH66410.1| phage antirepressor protein [Actinomyces urogenitalis DSM 15434]
Length = 262
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 23/245 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + PF++E R + D WFVA DV ALG N ++ + + + T
Sbjct: 1 MSEVIPFDYEGTNFRALQDSAGEPWFVANDVCEALGLSNPRSSLALLDEDEKGVHSMDTP 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRATSA 119
GG Q + I+SE +Y L+++S P A+ F+RWV EVLP +R+ G Y+ + +
Sbjct: 61 GGTQNLAIVSEAGLYSLILRSRKPEAKAFKRWVTHEVLPAIRRHGVYATPDTVEAMLQDP 120
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLK-----------------VNRGVTKITGVDQLEA 162
T++ L+ + Q + + K+ + +E
Sbjct: 121 DTMIATLTALKTEREARQALQAQAEADRPKVIFADAVAASHSTILIGDLAKLLRQNGVEI 180
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVS-----KVSGGYRPTP 217
+ + +L + +R P QRA+ + +K VS + T
Sbjct: 181 GANRLFEWMRRNGFLIARKGTDRNMPTQRAQEMGLFWVKETAITHSDGHVTVSRTPKVTG 240
Query: 218 KGEER 222
KG+E
Sbjct: 241 KGQEY 245
>gi|302876386|ref|YP_003845019.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579243|gb|ADL53255.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 253
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 32/259 (12%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F E ++RT+V + WF+ KDVA LGY N +A+N H K
Sbjct: 1 MNDLRIFTSEEFGQVRTVVINN-EPWFIGKDVAEKLGYSNGRDALNKHVDEDDKGVANCD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRAT 117
T GG Q + II+E +Y L++ S LP+A+KF++WV EVLP++RK G Y + + T
Sbjct: 60 TPGGKQDLVIINESGLYSLILGSKLPNAKKFKKWVTSEVLPSIRKHGVYMTNDTIEKAIT 119
Query: 118 SASTVLRVHKHLEELAKQAGLKD--------------------NQLLLKVNRGVTKITGV 157
S ++++ +L+E ++ L + N +L+ + K GV
Sbjct: 120 SPDFLIQLATNLKEEQQKRKLAEDKLQEQKPKVVFANAVAASHNSILVGELAKILKQNGV 179
Query: 158 DQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG--GYR 214
D + L I + G N P Q + L +K +S G
Sbjct: 180 D----VGQNRLFEWLRKYGYLIKRKGTDYNMPTQSSMELGLFEIKE-TSISHADGHVSIS 234
Query: 215 PTPKGEERGGKMCDVPMQH 233
TPK +G +
Sbjct: 235 KTPKVTGKGQVYFINKFKS 253
>gi|15923845|ref|NP_371379.1| anti-repressor [Staphylococcus aureus subsp. aureus Mu50]
gi|156979181|ref|YP_001441440.1| hypothetical protein SAHV_0850 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255005643|ref|ZP_05144244.2| hypothetical protein SauraM_04210 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14246624|dbj|BAB57017.1| similar to anti-repressor [Staphylococcus aureus subsp. aureus
Mu50]
gi|156721316|dbj|BAF77733.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 259
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 28/253 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT ++ D +F+ KDVA LGY N +A++ H K+
Sbjct: 1 MQALQTFNFEELPVRT-LEVDGEPYFIGKDVADILGYANGRDALSKHVDEDDKKVLTSRN 59
Query: 61 GGIQKV-----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
++ + ++E +Y L+ S L SA++F+RWV +VLP +RK G Y+ + +
Sbjct: 60 TTLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKYGIYATDNVIEQ 119
Query: 116 A-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
++ V ++ +Q + L ++ K VD++ +
Sbjct: 120 TLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKST 165
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQH 233
L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 GTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTITIVR 222
Query: 234 VEGSTQ---QLKW 243
+G Q +W
Sbjct: 223 SDGREDTVLQTRW 235
>gi|295101253|emb|CBK98798.1| Prophage antirepressor [Faecalibacterium prausnitzii L2-6]
Length = 333
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F+ E ++RTI++ + + F A DVA ALGY N N+A+N HC+ + KR
Sbjct: 83 NKIEIFKNEQFGEVRTILE-GEKVLFCAADVAKALGYTNPNKAVNDHCRAITKR-STPIS 140
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G +Q + I E DVYRL+++S LP+A+KFE WVF+EV+PT+RKTG Y + S
Sbjct: 141 GKVQSINFIPEGDVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGYMTD---------S 191
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ R+ K + + A L+L+ NR + + + + D+ I
Sbjct: 192 LLERIQKEPAVIVEFAQ----ALILEKNRVKALECELITAKPKADYYDAFINPDDCTNIR 247
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L P+ R + LLK SG P K G
Sbjct: 248 TTAKELKIPE--RKFVQFLLKEKYLFRSPSGQLLPYNKDSNAG 288
>gi|223984990|ref|ZP_03635090.1| hypothetical protein HOLDEFILI_02394 [Holdemania filiformis DSM
12042]
gi|239624256|ref|ZP_04667287.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|223963061|gb|EEF67473.1| hypothetical protein HOLDEFILI_02394 [Holdemania filiformis DSM
12042]
gi|239520642|gb|EEQ60508.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 255
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F E IRT ++++ + F DVATALGY N +A+ H +G K
Sbjct: 1 MNQIEIFNSPEFGSIRT-LEQNGKVLFCGTDVATALGYTNPRKAVRDHTRGGTKCSIGVQ 59
Query: 60 EG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + ++ I E D+YRL+ S LPSA++FE+WVF+EVLP +RK G+Y +
Sbjct: 60 TGKKADGSPAVQMVEMLFIPEGDLYRLIAHSKLPSAERFEQWVFDEVLPAIRKHGAYLTK 119
Query: 111 APKLR-ATSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
ATS ++++ + L E + A L++ LL+ +K D
Sbjct: 120 EKLWEIATSPEALIKLCSELLAEREENASLREENALLE-----SKAAFYDLF-------- 166
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
D + + + L P+R RF+ LL KR SG P K G C
Sbjct: 167 --IDLNHSTNLRTTAKELLVPER-RFVRFLLEKR-FVYRTASGNVLPYAKPANEG-LFCV 221
Query: 229 VPMQHVEGSTQQLKWNS 245
+
Sbjct: 222 KDYCNHGHIGSYTLITP 238
>gi|283797212|ref|ZP_06346365.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
gi|291075174|gb|EFE12538.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
Length = 248
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 74/251 (29%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F D+ATALGY A+N+HC+ KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFCGLDIATALGYAKPRNAVNSHCRYALKRGVPHP 59
Query: 60 EGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ + I E DVYRL+ S LPSA++FERWVF+EVLPT+RK G+Y A
Sbjct: 60 QNPECSIDMTFIPEGDVYRLITHSKLPSAERFERWVFDEVLPTIRKHGAYITREKLWEVA 119
Query: 117 TSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L E K A L++ +L+ K D +D+KH
Sbjct: 120 TSPEAMIKLCSDLLAEREKNAALREENAMLE-----GKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L P+R RF+ LL +R SG P K G C +
Sbjct: 165 STNLRTTAKELVVPER-RFIRFLLEQR-FVYRAPSGNVLPYAKPANDG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNSN 246
Sbjct: 222 HLGSYTLVTPK 232
>gi|313618470|gb|EFR90474.1| toxin-antitoxin system, toxin component, Bro family [Listeria
innocua FSL S4-378]
Length = 259
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 3 TITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ ++ E +RT +FV KDVA+ LGY NS +A+ H K T
Sbjct: 2 ELQVYKNAEFGSVRT-TTIGGQPYFVGKDVASILGYSNSRKALIDHVDEEDKGVTKCDTL 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q + II+E +Y L++ S +P+A+KF+RWV EVLP +RK G Y + A
Sbjct: 61 GGKQDLIIINESGLYCLILSSKMPNAKKFKRWVTSEVLPAIRKHGLYVTDDLIANPDLAI 120
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
K E K+ ++ K T D + + I+
Sbjct: 121 AAFTALKEEREKNKELMAAVAIGQQQIAEMKPKATYYDVVLKCRDA----------VNIS 170
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + A +N+ L ++G+Q + + K G
Sbjct: 171 VIAKDYGW--SAMRMNEYLHEKGIQFKQ-GNIWLLYQKYAPNG 210
>gi|160945875|ref|ZP_02093101.1| hypothetical protein FAEPRAM212_03408 [Faecalibacterium prausnitzii
M21/2]
gi|158443606|gb|EDP20611.1| hypothetical protein FAEPRAM212_03408 [Faecalibacterium prausnitzii
M21/2]
Length = 248
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
M + F+ E +R +++KD F DV ALGY++S +A+ AHC G A +
Sbjct: 1 MDQMEIFKNPEFGSVR-VIEKDGKYLFCGLDVTAALGYKDSAKALKAHCTSDGWAFYPLI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
G Q+ R ISE ++YRL+V S LPSA++FERWVF+EVLPT+RK G+Y A
Sbjct: 60 DNVGRTQQTRFISEGNLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAYITREKLWEVA 119
Query: 117 TSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L E K A L++ +L+ K D +D+KH
Sbjct: 120 TSPEAMMKLCSDLLAEREKNAALREENAVLE-----GKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L P+R RF+ LL +R +G P K G C +
Sbjct: 165 STNLRTTAKELAVPER-RFIRFLLEQR-FVYRAPAGNVLPYAKPANDG-LFCVKDYYNHG 221
Query: 236 GSTQQLKWNSN 246
Sbjct: 222 HLGSYTLVTPK 232
>gi|154499068|ref|ZP_02037446.1| hypothetical protein BACCAP_03060 [Bacteroides capillosus ATCC
29799]
gi|150271908|gb|EDM99134.1| hypothetical protein BACCAP_03060 [Bacteroides capillosus ATCC
29799]
Length = 309
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 18/223 (8%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F+ E ++RTI++ + + F A DVA ALGY N N+A+N HC+ + KR
Sbjct: 59 NKIEIFKNEQFGEVRTILE-GEKVLFCAADVAKALGYTNPNKAVNDHCRAITKR-STPIS 116
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G +Q + I E DVYRL+++S LP+A+KFE WVF+EV+PT+RKTG Y + S
Sbjct: 117 GKVQSINFIPEGDVYRLIIRSKLPAAEKFELWVFDEVIPTIRKTGGYMTD---------S 167
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ R+ K + + A L+L+ NR + + + + D+ I
Sbjct: 168 LLERIQKEPAVIVEFAQ----ALILEKNRVKALECELITAKPKADYYDAFINPDDCTNIR 223
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L P+ R + LLK SG P K G
Sbjct: 224 TTAKELKIPE--RKFVQFLLKEKYLFRSPSGQLLPYNKDSNAG 264
>gi|229551636|ref|ZP_04440361.1| probable antirepressor protein [Lactobacillus rhamnosus LMS2-1]
gi|229314954|gb|EEN80927.1| probable antirepressor protein [Lactobacillus rhamnosus LMS2-1]
Length = 253
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT+ + IWF A DV ALG +N ++AI + R+ L +
Sbjct: 1 MNELQLFQFEDNQIRTV-SSNGIIWFAAVDVTDALGIKNPSDAIKPLDEDERTRFNLGRQ 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
G ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y +A +
Sbjct: 60 GSA---NFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAYMTPETIEKAIYNP 116
Query: 120 STVLRVHKHLE-ELAKQAGL-------------------KDNQLLLKVNRGVTKITGVDQ 159
++ + L+ E AK A L + +L+ V K GVD
Sbjct: 117 DFIINLATQLKDEQAKTAALTADNETMKPKALFADAVATSNTTILVGDLAKVLKQNGVD- 175
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG--GYRPT 216
+ K L + ++ I +IG N P QRA L +K +S G + T
Sbjct: 176 ---IGAKRLFAWLREQGYLIKRIGADYNSPTQRAMELGLFEVKE-TAISHSDGHVTVQKT 231
Query: 217 PKGEERGGKMCDVPM 231
PK +G +
Sbjct: 232 PKVTGKGQQYFINKF 246
>gi|261366370|ref|ZP_05979253.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
gi|282571627|gb|EFB77162.1| toxin-antitoxin system, toxin component, Bro family
[Subdoligranulum variabile DSM 15176]
Length = 248
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y + A
Sbjct: 60 QSPDRKISMTFIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNAG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|266623878|ref|ZP_06116813.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
gi|288864310|gb|EFC96608.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
hathewayi DSM 13479]
Length = 248
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E D+YRL+V S LPSA++FERWVF+EVLPT+RK G+Y + A
Sbjct: 60 QSPDRKISMTFIPEGDLYRLIVHSKLPSAERFERWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNAG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|325264650|ref|ZP_08131380.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. D5]
gi|291548605|emb|CBL24867.1| Prophage antirepressor [Ruminococcus torques L2-14]
gi|295099486|emb|CBK88575.1| Prophage antirepressor [Eubacterium cylindroides T2-87]
gi|324030312|gb|EGB91597.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. D5]
Length = 248
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY NS +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFCGTDVAAALGYSNSRDAIIRHCRYVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E D+YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y A
Sbjct: 60 QSPDRKISMTFIPEGDLYRLIVHSKLPSAEQFEQWVFDEVLPTIRKHGAYLTREKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNTG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNSN 246
+
Sbjct: 222 HTGSYTLVTPK 232
>gi|209560008|ref|YP_002286480.1| Antirepressor [Streptococcus pyogenes NZ131]
gi|209541209|gb|ACI61785.1| Antirepressor [Streptococcus pyogenes NZ131]
Length = 253
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 110/253 (43%), Gaps = 22/253 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M I F F+ ++RT+ D +FV KDVA LGY NS +A++ H K + T
Sbjct: 1 MQEI--FNFKGQEVRTVT-IDNEPYFVGKDVADILGYSNSRDALSKHVDTEDKLTSQIAT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATS 118
G ++ II+E +Y L++ S LP A++F+RWV EVLP +RK G+Y + + T+
Sbjct: 58 AGQMRNQTIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGAYVTDYKAVDLLTN 117
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVN--------------RGVTKITGVDQLEAMD 164
+ + + L E K K + KV + KI + +
Sbjct: 118 PNALGNFLQGLTEQVKHLETKIEKDKPKVLFADAVSASKSSCLIGELAKILKQNGINIGQ 177
Query: 165 IKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKL-LLKRGLQVSKVSGGYRPTPKGEER 222
K + YL I++ GE N P Q++ L L K + S TPK +
Sbjct: 178 NKLFQWLRANGYL-ISRRGESWNQPTQKSMQLGLFELKKTAINHSDGHTTTNVTPKVTGK 236
Query: 223 GGKMCDVPMQHVE 235
G + + E
Sbjct: 237 GQQYFINKFLNQE 249
>gi|227489381|ref|ZP_03919697.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090559|gb|EEI25871.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51867]
Length = 282
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-VAKRYPLKTEGGIQKV 66
E IRTI + F KDVATALGY N+ +A+ HCKG V YPL+T GGIQ+V
Sbjct: 10 NHEFGTIRTITA-GGQVLFCGKDVATALGYANTKDALARHCKGVVVNHYPLETAGGIQQV 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
R ISE D+YRL+V S LP A++FE WVF++VLP++R G Y+++ +
Sbjct: 69 RFISEGDLYRLIVSSKLPVARQFEAWVFDDVLPSIRLHGMYAIDELLNDDLFLERAIAAL 128
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ K + K++ D + + +T T+I +
Sbjct: 129 -------RAERAKRLAAEQALLEAAPKVSYYDVM----------LVSPSLITTTEIAKDY 171
Query: 187 NPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKW 243
A+ LN++L + +Q + SG + K E+G + + W
Sbjct: 172 GL--SAKKLNQILREEQVQFHQ-SGRWFLYAKFAEQGYAQSKTHEYDEGKTRTHMYW 225
>gi|307692652|ref|ZP_07634889.1| prophage antirepressor [Ruminococcaceae bacterium D16]
Length = 255
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 31/257 (12%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F E IRT ++++ + F DVATALGY N +A+ H +G K
Sbjct: 1 MNQIEIFNSPEFGSIRT-LEQNGKVLFCGTDVATALGYTNPRKAVRDHTRGGTKCSIGVQ 59
Query: 60 EG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + ++ I E D+YRL+ S LPSA++FE+WVF+EVLP +RK G+Y +
Sbjct: 60 TGKKADGSPAVQMVEMLFIPEGDLYRLIAHSKLPSAERFEQWVFDEVLPVIRKHGAYLTK 119
Query: 111 APKLR-ATSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
ATS ++++ + L E + A L++ LL+ +K D
Sbjct: 120 EKLWEIATSPEALIKLCSELLAEREENASLREENALLE-----SKAAFYDLF-------- 166
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
D + + + L P+R RF+ LL KR SG P K G C
Sbjct: 167 --IDLNHSTNLRTTAKELLVPER-RFVRFLLEKR-FVYRTASGNVLPYAKPANEG-LFCV 221
Query: 229 VPMQHVEGSTQQLKWNS 245
+
Sbjct: 222 KDYCNHGHIGSYTLITP 238
>gi|218290598|ref|ZP_03494700.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
gi|218239382|gb|EED06579.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
Length = 256
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 16/232 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M T+ PFE+E ++R +V D W+VAKDV LG N + A++ ++T
Sbjct: 4 MDTLLPFEYEGKQVRVVVV-DGEPWWVAKDVCDVLGIGNPSMALSRLDDDEKGLSSIETP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG+Q+V +++EP +Y L++ S P A+ F+RW+ +VLPTLRKTG Y + P ++T
Sbjct: 63 GGVQQVAVVNEPGLYTLILGSRKPEAKAFKRWITHDVLPTLRKTGRYEM--PDRKSTEDE 120
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI---------KHLPSS 171
+ R + L + A + +++L + +E++ + L
Sbjct: 121 EMKR--ERLAVMRMNAQARLAKVVLDAAQKFRDQISQTAIESLLFAAVNIVAGRELLQPP 178
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + T+I E A + ++ + GL+ + ++
Sbjct: 179 AKERLYSATEIAEEAGV--SANLIGRIANQYGLKTPEYGEFVLDKSPYSDKQ 228
>gi|317487091|ref|ZP_07945898.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921663|gb|EFV42942.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 231
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 29/245 (11%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M FE E KIR +V+ WFV KDV L NS +A + + T
Sbjct: 1 MEMPQIFENKEFGKIR-VVEHSGTPWFVGKDVCDCLEIGNSRDAAASLDDDEKGVALIDT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
GG Q++ IISEP +Y L+++S P A+ F+RW+ EVLP +RK G Y A +
Sbjct: 60 PGGKQEMSIISEPGLYFLVLRSRKPEAKAFKRWIVHEVLPAIRKHGGYLTPKKLEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++R+ L+E ++A ++ + + + V K T
Sbjct: 120 PDVLIRLATQLKE-EREARVQ-AEARVAILSHVRKT----------------------YT 155
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
T+I + L A LN+LL +R +Q + +G Y + E G + +
Sbjct: 156 TTEIAKELGMR-SAVALNRLLCERHIQFKQ-NGTYVLYAEYAEHGYVHIKQEILENDKIV 213
Query: 239 QQLKW 243
+W
Sbjct: 214 YHRRW 218
>gi|154500129|ref|ZP_02038167.1| hypothetical protein BACCAP_03789 [Bacteroides capillosus ATCC
29799]
gi|150271085|gb|EDM98354.1| hypothetical protein BACCAP_03789 [Bacteroides capillosus ATCC
29799]
Length = 248
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR I + D F DVA +LGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKSPEFGSIRVIEEND-KYLFCGLDVANSLGYSNPRDAIIRHCRCVVKRDAPHP 59
Query: 60 EGGIQK--VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ +K + I E DVYRL+V S LPSA++FERWVF++VLP +RK G+Y A
Sbjct: 60 QSPDRKISMTFIPEGDVYRLIVHSKLPSAERFERWVFDQVLPIIRKHGAYMTREKLWEVA 119
Query: 117 TSASTVLRVH-KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS +L++ L E K L++ +L+ K D +D+KH
Sbjct: 120 TSPEALLKLCSDLLAEREKNTALREENAMLE-----GKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L P+ R + LL++ SG P K G C +
Sbjct: 165 STNLRTTAKELVVPE--RQFVRFLLEQRFVYRTASGNVLPYAKPSNNG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|325300515|ref|YP_004260432.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324320068|gb|ADY37959.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 283
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 15/251 (5%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F + I T+ ++ + F DVA ALGY ++ +A+ HCKGV L T
Sbjct: 5 NAIQVFSHPQFGSINTVETENGKVLFKGNDVARALGYSDAPQAVRMHCKGVV---VLTTP 61
Query: 61 GGIQ-------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
Q + I E DVYRL+++S LP A+KF+ WV EEVLP++RK G Y +A
Sbjct: 62 SENQYGTVVMLPTKYIPEADVYRLVMRSKLPEAEKFQDWVCEEVLPSIRKHGGYLTDAAL 121
Query: 114 LR-ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
R T ++ + ++E K + + + + +++L
Sbjct: 122 QRVVTEPDFLIGLANAIKEERKNRLEVEAKYEEQKQLIGKQQEQIEELGKRTSYVELVLQ 181
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ 232
L ITQI + R +N +L ++G+Q K + + +++G
Sbjct: 182 CKGLLDITQIAQDYG--MSGRKMNAILHEKGIQY-KDNKQWILYAAYKDKGYVHSATLSL 238
Query: 233 HVEGSTQQLKW 243
S + +W
Sbjct: 239 ESGKSVMRTQW 249
>gi|309776219|ref|ZP_07671210.1| toxin-antitoxin system, toxin component, Bro family
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916170|gb|EFP61919.1| toxin-antitoxin system, toxin component, Bro family
[Erysipelotrichaceae bacterium 3_1_53]
Length = 248
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 24/250 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR +++++ F DVA ALGY N +AI HC+ V KR
Sbjct: 1 MNQMEIFKNPEFGSIR-VIEENGKYLFSGTDVAAALGYSNPRDAIIRHCRYVVKRDAPHP 59
Query: 60 EG--GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-A 116
+ + I E D+YRL+V S LPSA++FE+WVF+EVLPT+RK G+Y + A
Sbjct: 60 QSLDRKISMTFIPEGDLYRLIVHSKLPSAERFEQWVFDEVLPTIRKHGAYLTKEKLWEVA 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDE 175
TS ++++ L A + N L K N + K D +D+KH
Sbjct: 120 TSPEALMKLCSDL-----LAEREANISLRKENAQLEGKAAFYDLF--IDLKH-------- 164
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ + L+ P+ R + L++R SG P + G C +
Sbjct: 165 STNLRTTAKELDVPE--RRFVRFLIERRFVYRTASGNVLPYANVKNAG-LFCVKDYCNHG 221
Query: 236 GSTQQLKWNS 245
+
Sbjct: 222 HTGSYTLVTP 231
>gi|317486781|ref|ZP_07945597.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316921944|gb|EFV43214.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 258
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 30/251 (11%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + FE E K+R +V++D WFVAKDV L + ++ I+ ++T
Sbjct: 1 MSEMQIFEKAEFGKVR-VVERDGQPWFVAKDVCECLELTDVSKTISLLDDDEKGTNSIRT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
GG Q++ ++SEP +Y L+++S P A+ F+RWV +V+P++RK G Y+
Sbjct: 60 PGGEQQMLVVSEPGLYSLILRSRKPEAKAFKRWVTHDVIPSIRKRGLYATPQTVEAMLAD 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA---------------- 162
T +++ L+E K L KV + K+ D + A
Sbjct: 120 PDTAIKLLTSLKE----ERAKSAALAAKVEQDAPKVLFADSVAASRSSILIGDLAKLLVQ 175
Query: 163 ----MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP--T 216
+ L ++ I + P QR+ + +K V G R T
Sbjct: 176 NGVKIGQNRLFVYLREKGFLIQSGSRKNTPTQRSMEMGLFEVKE-YLVHNPDGSTRTRFT 234
Query: 217 PKGEERGGKMC 227
K +G
Sbjct: 235 TKVTGKGQLYF 245
>gi|167746060|ref|ZP_02418187.1| hypothetical protein ANACAC_00755 [Anaerostipes caccae DSM 14662]
gi|167654575|gb|EDR98704.1| hypothetical protein ANACAC_00755 [Anaerostipes caccae DSM 14662]
Length = 265
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 20/248 (8%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IRT + +FV +D+A LGY N+ +AI+ H + ++
Sbjct: 1 MNELQIFKNAEFGSIRT-TTINGEPYFVGRDIAEILGYSNTKDAISTHVDEEDRTVIQRS 59
Query: 60 EGG-----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
E + + +I+E +Y L++ S +P+A+KF+ WV EVLP +RK G ++V+
Sbjct: 60 ENTTLEIPNRGLTVINESGLYSLILSSKMPNAKKFKHWVTSEVLPAIRKHGVFAVDEVLA 119
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
L K +E +++ L+ Q++ N+ + + ++ + +
Sbjct: 120 NPDVLINALMELK--KEREEKSALQ--QIVAIQNQQIIE------MKPKASYYDVVLNCK 169
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQH 233
+ + I+ I + A +N+ L ++G+Q + + + E G
Sbjct: 170 DLVAISVIAKDYGWT--ANHMNQYLHEKGIQFKQGKKIWLLYKEYAEMGLTSTKTHTYSG 227
Query: 234 VEGSTQQL 241
+GS
Sbjct: 228 SDGSAHSK 235
>gi|322689040|ref|YP_004208774.1| phage antirepressor [Bifidobacterium longum subsp. infantis 157F]
gi|320460376|dbj|BAJ70996.1| putative phage antirepressor [Bifidobacterium longum subsp.
infantis 157F]
Length = 259
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 16/240 (6%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F+F+ +RT+ D+ WFVAKDV LG ENS +A +
Sbjct: 1 MNNSIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGLENSRKATAELDSDEKNTVTISD 60
Query: 60 E-GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
G IISEP +YRL+++S P A++F+RWV EVLP++R+ G+Y E+ +A T
Sbjct: 61 GIAGNPNKTIISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVT 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
++R+ + KQ + + +V R K D +E L
Sbjct: 121 EPDFLIRLATQI----KQERAEKEKAQAQVERMRPKALFADAVETSKTSIL-------VG 169
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
+ ++ + L L G + S PT K E G + ++ V S
Sbjct: 170 DLAKVLKGNGVDIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELG--LFEIKETTVVHS 227
>gi|16801480|ref|NP_471748.1| hypothetical protein lin2418 [Listeria innocua Clip11262]
gi|16414940|emb|CAC97645.1| lin2418 [Listeria innocua Clip11262]
Length = 256
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 27/249 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F FE +K+RT++ D+ +FV DVA+ LGY N +A+ HCK A+ +
Sbjct: 1 MTNLKLFNFEGSKVRTVI-LDEEPFFVGIDVASILGYSNPQKAMRDHCKKPAESLVNDSL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
G ++ ++SE DVYRL+++S LPSA+KFE W+ +EVLP++RK G+Y + +A T
Sbjct: 60 GRPRRTLVLSESDVYRLVLRSDLPSAEKFENWLMDEVLPSIRKHGAYMTDDTIEKAITDP 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD--------------- 164
++R+ +L+E K L+ Q K+ K+ D + +
Sbjct: 120 DFLIRLATNLKE-EKSKRLEAEQ---KIEAQRPKVLFADAVSDTEGTILIRDLAKLIQQN 175
Query: 165 -----IKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
K L I++ G N P Q++ L +K + T K
Sbjct: 176 GVDIGEKRLFEWLRQNGYLISRRGTDYNRPTQKSMELGLFKIKETAIMRSSGAHTAITAK 235
Query: 219 GEERGGKMC 227
+G
Sbjct: 236 VTGKGQLYF 244
>gi|237717608|ref|ZP_04548089.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229453112|gb|EEO58903.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 257
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 23/231 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ I+ FE E +IRT ++ D IWF A DVA+ALGY N +A+ HCK GV Y
Sbjct: 1 MNKISVFEHPEFGRIRT-LEIDGKIWFCASDVASALGYSNPRDAVARHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y +
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKDGGYLLGKKGETDN 118
Query: 118 S--ASTVLRVHKHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
A TVL K ++E + ++N +LK+ K+ D++
Sbjct: 119 ELLARTVLLAQKRIKERDSRISALEKENNYAILKLKLQAPKVQYYDKV----------LQ 168
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ T TQI + L A LNK L G+Q + SG + + +G
Sbjct: 169 SQSTYTTTQIAKELG--MTAGMLNKRLRWAGIQFRQ-SGQWLLKAPYQNQG 216
>gi|298384274|ref|ZP_06993834.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
gi|298262553|gb|EFI05417.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 1_1_14]
Length = 256
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ I+ FE E +IRT +D D IWF A DVA+ALGY N +A+ HCK GVA Y
Sbjct: 1 MNKISIFEHPEFGRIRT-LDIDGKIWFCASDVASALGYANPRDAVARHCKPMGVA-IYDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T +QK++ I+E +VYRL+ S LP+A+KFE W+F+E++P K G Y +
Sbjct: 59 PTRSAVQKIKYINEGNVYRLIAGSKLPAAEKFESWIFDELVPGTLKNGGYILRKSGETDN 118
Query: 118 S--ASTVLRVHKHLEELAK---QAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
A VL ++ + + +N LK+ K+ D++
Sbjct: 119 ELLARAVLLAQGKIKARDEHIGKLQQANNLAFLKLKLQAPKVAYYDKV----------LQ 168
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ T TQI + L A LN+ L G+Q + SG + + +G
Sbjct: 169 SQSTYTATQIAKELGMSASA--LNRRLKWAGIQFRQ-SGQWLLKAPYQNQG 216
>gi|239621455|ref|ZP_04664486.1| prophage antirepressor [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239515916|gb|EEQ55783.1| prophage antirepressor [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 255
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PFEF N + T+ ++ + F AK VATALGY+ +A+ HCKG R PL+T G
Sbjct: 4 SNVQPFEFRGNPVATVTAENGTVLFCAKHVATALGYKRPADAVKQHCKGSVIRRPLETAG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
GIQ++ I+E DVYRL+ S LPSA +FE W+F+EV+P +R+TG Y + T A
Sbjct: 64 GIQQMVFITEGDVYRLIASSKLPSAVEFEHWLFDEVVPQIRRTGGYIPQGETPEETMARA 123
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
VL K +E+ KQ ++ K+ D + + I +
Sbjct: 124 VLIAQKTIEDQRKQ-----------LDEQKPKVLFADAVATS----------KRSILIGE 162
Query: 182 IGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
+ + L N+L L + G + + PT K E G + +V + S
Sbjct: 163 LAKILKQNGVKTGQNRLFKQLREDGFLMKRNGNPNMPTQKSMELG--LFEVKETSIAHS 219
>gi|260579059|ref|ZP_05846958.1| Bro family toxin-antitoxin system, toxin component [Corynebacterium
jeikeium ATCC 43734]
gi|300933482|ref|ZP_07148738.1| Bro family antirepressor [Corynebacterium resistens DSM 45100]
gi|258602810|gb|EEW16088.1| Bro family toxin-antitoxin system, toxin component [Corynebacterium
jeikeium ATCC 43734]
Length = 255
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 26/259 (10%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTE 60
+ F + IRT+ +D ++F +DV TALGY N+++AI HC+GV RYP+
Sbjct: 5 DLQVFTNDAFGTIRTVEHED-KVYFCGRDVVTALGYTNTSKAIQDHCRGVPFRYPIVDAL 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q+ R I+E D+YRL+ S LP+AQ FE WV +EVLPT+R+ G Y+++
Sbjct: 64 GRTQEARFITEGDLYRLIFSSKLPAAQDFEAWVVDEVLPTIRRHGVYAIDELLDNDEFLE 123
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + K + K++ D + +D LTIT
Sbjct: 124 RAI-------VQLRSERAKRLAAEQALLEAAPKVSYYDVV----------LQSDSLLTIT 166
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
+I + A+ LN LL G+Q + SG + + E+G +
Sbjct: 167 EIAKDYGL--SAKKLNLLLHDAGVQFRQ-SGRWFLYARFAEQGYTQSKTHEYDEGKTRTH 223
Query: 241 LKWNSN---LLVSFLQNEL 256
+ W + L+N+
Sbjct: 224 MYWTQKGRLFVYDLLKNQF 242
>gi|260887043|ref|ZP_05898306.1| toxin-antitoxin system, toxin component, Bro family [Selenomonas
sputigena ATCC 35185]
gi|330839179|ref|YP_004413759.1| prophage antirepressor [Selenomonas sputigena ATCC 35185]
gi|260863105|gb|EEX77605.1| toxin-antitoxin system, toxin component, Bro family [Selenomonas
sputigena ATCC 35185]
gi|329746943|gb|AEC00300.1| prophage antirepressor [Selenomonas sputigena ATCC 35185]
Length = 247
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
+ + FE E +RTI+ K+ +FV KDVA+ LGY AI AH K +
Sbjct: 3 NELQVFENPEFGTVRTII-KNGEPYFVGKDVASILGYTAERNAIAAHVDEEDKLTHRFSA 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G +++ II+E +Y L++ S LP+A+KF+RWV EVLP++RKTGSY+ + K
Sbjct: 62 SGQNREMTIINESGLYSLILSSKLPAAKKFKRWVTSEVLPSIRKTGSYTAKHAKPDDAMQ 121
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNR--------GVTKITGVDQLEAMDIKHLPSS 171
S K LE + + A + LLLK+ V + + LP +
Sbjct: 122 S------KRLEVMERNARTRAANLLLKIAERTNIPEYKAVCNAKAAEMVAGEMFLPLPVA 175
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQV 206
+ Y + T+IG A + KL L+V
Sbjct: 176 ERRTY-SATEIGAMFGV--SANKIGKLANMHKLKV 207
>gi|319894711|gb|ADV76522.1| phage anti-repressor protein [Staphylococcus phage TEM126]
Length = 262
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
P+ +G Q +W
Sbjct: 223 PIVRSDGREDTVLQTRW 239
>gi|66395387|ref|YP_239685.1| ORF017 [Staphylococcus phage 53]
gi|151221207|ref|YP_001332029.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|257433185|ref|ZP_05609543.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
E1410]
gi|62635737|gb|AAX90848.1| ORF017 [Staphylococcus phage 53]
gi|104641722|gb|ABF73100.1| phage anti-repressor [Staphylococcus aureus phage phiNM2]
gi|150374007|dbj|BAF67267.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|257281278|gb|EEV11415.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
E1410]
Length = 262
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
P+ +G Q +W
Sbjct: 223 PIVRSDGREDTVLQTRW 239
>gi|282909325|ref|ZP_06317141.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958768|ref|ZP_06376214.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus A017934/97]
gi|282326893|gb|EFB57190.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283789808|gb|EFC28630.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus A017934/97]
Length = 262
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ ++
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDS 119
Query: 112 -PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ + ++ + ++ +Q + L ++ K VD++
Sbjct: 120 VIENTLNNPDYIINILTEYKKEKEQ----NLLLQQEMGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
P+ +G Q +W
Sbjct: 223 PIVRSDGREDTVLQTRW 239
>gi|227540971|ref|ZP_03971020.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183231|gb|EEI64203.1| Bro family antirepressor [Corynebacterium glucuronolyticum ATCC
51866]
Length = 282
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-VAKRYPLKTEGGIQKV 66
E IRTI + F KDVATALGY N+ +A+ HCKG V YPL+T GGIQ+V
Sbjct: 10 NHEFGTIRTITS-GGQVLFCGKDVATALGYANTKDALARHCKGVVVNHYPLETAGGIQQV 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
R ISE D YRL+V S LP+A++FE WVF++VLP++R G Y+++ +
Sbjct: 69 RFISEGDPYRLIVSSKLPAARQFEAWVFDDVLPSIRLHGMYAIDELLNDDLFLERAIAAL 128
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ K + K++ D + + +T T+I +
Sbjct: 129 -------RAERAKRLAAEQALLEAAPKVSYYDVM----------LVSPSLITTTEIAKDY 171
Query: 187 NPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKW 243
A+ LN++L + +Q + SG + K E+G + + W
Sbjct: 172 GL--SAKKLNQILREEQVQFHQ-SGRWFLYAKFAEQGYTQSKTHEYDEGKTRTHMYW 225
>gi|300933384|ref|ZP_07148640.1| Bro family antirepressor [Corynebacterium resistens DSM 45100]
Length = 255
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 117/263 (44%), Gaps = 26/263 (9%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTE 60
+ F + IRT+ +D ++F +DV TALGY N+++AI HC+GV RYP+
Sbjct: 5 DLQVFTNDAFGTIRTVEHED-KVYFCGRDVVTALGYTNTSKAIQDHCRGVPFRYPIVDAL 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q+ R I+E D+YRL+ S LP+AQ FE WV +EVLPT+R+ G Y+++
Sbjct: 64 GRTQEARFITEGDLYRLIFSSKLPAAQDFEAWVVDEVLPTIRRHGVYAIDELLDND---- 119
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+H + K + K++ D + +D LTIT
Sbjct: 120 ---EFLEHAIVQLRSERAKRLAAEQALLEAAPKVSYYDVV----------LQSDSLLTIT 166
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
+I + A+ LN LL G+Q + SG + + E+G +
Sbjct: 167 EIAKDYGL--SAKKLNLLLHDAGVQFKQ-SGRWFLYARFAEQGYTQSKTHEYDEGKTRTH 223
Query: 241 LKWNSN---LLVSFLQNELINTP 260
+ W + L+N+ P
Sbjct: 224 MYWTQKGRLFVYDLLKNQFDLLP 246
>gi|255092521|ref|ZP_05321999.1| prophage antirepressor [Clostridium difficile CIP 107932]
gi|260683185|ref|YP_003214470.1| hypothetical protein CD196_1442 [Clostridium difficile CD196]
gi|260209348|emb|CBA62771.1| putative uncharacterized protein [Clostridium difficile CD196]
Length = 257
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
+ + F+ + +IR ++D + WFV KDVA LGY+++++A+ H K + T
Sbjct: 3 NNLQVFKNSDFGEIR-VIDLNGEPWFVGKDVAETLGYKDTSDALKRHVDDEDKGVGEIPT 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK-LRATS 118
GG Q ++II+E +Y L++ S L +A+KF+ WV +VLP++RKTG+YS + + + S
Sbjct: 62 PGGNQNMKIINESGLYSLILSSKLLTAKKFKHWVTRDVLPSIRKTGTYSSKKSECSKDDS 121
Query: 119 ASTVLRVHKHLE-ELAKQAGLK---DNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ L+ A++A + +++ +K + + ++ L + LP +
Sbjct: 122 EIKYMNAQTRLKNARAREAKIYLELADKVDIKEYKQIMYSKTIELLSGETLIPLPKMERK 181
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS 210
Y + T IG+ L A + L L VS VS
Sbjct: 182 TY-SATDIGKMLGI--SANKVGGLAKALNLNVSTVS 214
>gi|292491104|ref|YP_003526543.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579699|gb|ADE14156.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 316
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 21/184 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------ 54
M+ + PF F+ + IR ++ D WFVAKD+ L N +EA+
Sbjct: 1 MNDLIPFNFDGHDIRVVM-IDGEPWFVAKDLCDVLEIGNPSEAMKRLDDDEKMTLSNTEG 59
Query: 55 YPLKTE------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ TE GG Q +++E VY L+ S P A++F RWV E+LPTLRKTG Y+
Sbjct: 60 QKINTESHSGKRGGAQFFNVVNESGVYNLIFASRKPEARRFRRWVTSELLPTLRKTGHYA 119
Query: 109 V-----EAPKLRATSASTVL---RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ P++ A A ++ RV + + + AGL L + N V + TG+D L
Sbjct: 120 MLGAEPSGPRVPAHEADKLVAADRVFRAMLRAGRAAGLPTPTALKRANLEVVRQTGIDIL 179
Query: 161 EAMD 164
E
Sbjct: 180 EKTG 183
>gi|258543092|ref|YP_003188525.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256634170|dbj|BAI00146.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01]
gi|256637230|dbj|BAI03199.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-03]
gi|256640282|dbj|BAI06244.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-07]
gi|256643339|dbj|BAI09294.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-22]
gi|256646394|dbj|BAI12342.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-26]
gi|256649447|dbj|BAI15388.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-32]
gi|256652433|dbj|BAI18367.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655491|dbj|BAI21418.1| prophage antirepressor [Acetobacter pasteurianus IFO 3283-12]
Length = 234
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I PF FE + +R I +D WFV DV L + NS + + T
Sbjct: 1 MSNIIPFNFEDHAVRVIT-RDGEPWFVLADVCDVLEHTNSRVVADRLEDDERDVSNVYTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q + II+E +Y L+ S P A++F +WV EVLP +RKTGSY++ P + S
Sbjct: 60 GGPQDMSIINESGLYNLIFTSRKPEAKRFRKWVTGEVLPAIRKTGSYAL--PTDKQEWFS 117
Query: 121 TVLRVHKHLEELAKQAGLKD 140
RV + L + A K+
Sbjct: 118 RFARVLGMWDTLGESAAEKE 137
>gi|294102125|ref|YP_003553983.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
gi|293617105|gb|ADE57259.1| prophage antirepressor [Aminobacterium colombiense DSM 12261]
Length = 257
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 104/248 (41%), Gaps = 30/248 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLK 58
M + FEFE+ +R +D+ N W+VA+DV LGY N+ +A+N H K
Sbjct: 1 MKGLQIFEFENQDVRVRIDEAGNPWWVARDVCDVLGYSNARDAVNNHVRIKHRDAVAIPD 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT- 117
G Q +ISEP +Y L+++S LPSA +F+ WV EEVLP +RK +Y
Sbjct: 61 AMGRNQLTSVISEPGLYSLVLRSKLPSAVRFQDWVTEEVLPAIRKHSAYLTPQKIEEVLC 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA--------------- 162
+ T++R+ L++ +Q +L KV K+ + + A
Sbjct: 121 NPDTIIRLATDLKKEREQR----LRLASKVREDAPKVIFAESVSASHTSILVGDLAKLLR 176
Query: 163 -----MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP-- 215
M L I R P QRA L +K ++ G R
Sbjct: 177 QNGIQMGQNRLFDWLRRRGYLIKSGSSRNMPTQRAMELGLFEIKERT-INNPDGSVRITR 235
Query: 216 TPKGEERG 223
TPK +G
Sbjct: 236 TPKVTGKG 243
>gi|315650289|ref|ZP_07903361.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
gi|315487400|gb|EFU77710.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
Length = 259
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 25/241 (10%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
+ + F+ E +IR + + WFV KDVA LGY N +A++ H K T
Sbjct: 5 NELKIFKNSEFGEIRMV-EICGEPWFVGKDVAEVLGYSNPRDALSKHVDSEDKGVAKCDT 63
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + +I+E +Y L++ S LP+A+ F+RWV EVLP +RK G Y+ E A
Sbjct: 64 LGGSQDLTVINESGLYSLILSSKLPNAKAFKRWVTSEVLPAIRKHGLYAKEELLDNPDIA 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQ-----------------LLLKVNRGVTKITGVDQLEA 162
+ K E K +++ Q +L+ + K G D +
Sbjct: 124 IAAFKALKEEREARKALEVENKQMQPLALFAKSVSSSDTSILIGDLAKLLKQNGYDTGQ- 182
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
K L + + P Q+A L +K ++ G R T +
Sbjct: 183 ---KRLFEELRQRSFLMKSGSSKNLPTQKAMELGLFEVKEST-INNPDGSVRVTKTTKVT 238
Query: 223 G 223
G
Sbjct: 239 G 239
>gi|38234699|ref|NP_940466.1| putative DNA-binding bacteriophage protein [Corynebacterium
diphtheriae NCTC 13129]
gi|38200963|emb|CAE50682.1| Putative DNA-binding bacteriophage protein [Corynebacterium
diphtheriae]
Length = 264
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F + IRTI D + F KDVATALGY N+++A+ H K V RYPL+T
Sbjct: 3 NIIQTFTNDVFGTIRTITT-DVQMPFCGKDVATALGYVNASKAVQDHYKRVLFRYPLETA 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ+VR I+E D+YRL++ S L +AQKFE WVF+EVLPT+R+ G Y+ +
Sbjct: 62 GGIQQVRFITEGDLYRLIISSKLSAAQKFEAWVFDEVLPTIRRHGVYAYDDLLADDEFLE 121
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ A L+ Q LL+ K++ D + +D LT T
Sbjct: 122 HAI------------ATLRAEQALLEA---APKVSYYDLV----------LQSDSLLTTT 156
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + A+ LN++L +Q + S + K E+G
Sbjct: 157 AIAKDYGL--SAKKLNRILRDAHVQFHQSSR-WFLYAKFAEQG 196
>gi|260664719|ref|ZP_05865571.1| prophage antirepressor [Lactobacillus jensenii SJ-7A-US]
gi|260561784|gb|EEX27756.1| prophage antirepressor [Lactobacillus jensenii SJ-7A-US]
Length = 256
Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 16/250 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+ + F FE ++RT+ D +FV KDVA LGY N + IN H ++ Y T
Sbjct: 1 MNNLQVFNFEDARVRTV-SIDGKPYFVGKDVAEILGYSNGSRDINRHVDSEDRQNYQNGT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+ + +I+E +Y L++ S LP+A+KF+RWV EVLPT+RK G+Y E A +
Sbjct: 60 FESPRGLTVINESGLYSLILSSKLPTAKKFKRWVTSEVLPTIRKHGAYMTEQKIEEALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + K L+ +Q L Q V K D + + + L D
Sbjct: 120 PDTLITLAKQLKAEKEQRLLAQKQ----VEEMTPKAIFHDAVASAENTML---VRDVAHF 172
Query: 179 ITQIGERLNPPQRA--RFLNKLLLKRG--LQVSKVSG--GYRPTPKGEERGGKMCDVPMQ 232
+ Q G + + LN L K Q+S G + T G K P
Sbjct: 173 LRQNGVDIGGTRFFVWLRLNGFLTKNNQPTQLSLERGYFRVKETVVHTNHGFKTKTTPKI 232
Query: 233 HVEGSTQQLK 242
G T LK
Sbjct: 233 TGRGQTFFLK 242
>gi|309806834|ref|ZP_07700823.1| phage antirepressor protein [Lactobacillus iners LactinV 03V1-b]
gi|308166808|gb|EFO68998.1| phage antirepressor protein [Lactobacillus iners LactinV 03V1-b]
Length = 264
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 100/253 (39%), Gaps = 28/253 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ I F FE+N+IR ++ D +FV KDVA LGY + N+A+ H K +
Sbjct: 4 NEIQIFNFENNEIRA-LNIDGKPYFVGKDVADVLGYADQNKALAMHVDDEDKLNDKTASS 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + +I+E +Y L++ S +P+A+KF+RWV EVLP + G Y + T
Sbjct: 63 LGQRGGWLINESGLYSLILSSKMPNAKKFKRWVTSEVLPAIVHKGVYMTDKKAYDITHDR 122
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA------------------ 162
+ + L++ A Q KD Q+ K D +
Sbjct: 123 SGATLADLLQQAADQLKQKDIQI----AEMKPKALFADAVATSNRSILVGELAKLIRQNG 178
Query: 163 --MDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSGGYRPTPK 218
+ L + + I + G N P Q+A + +K + S + T K
Sbjct: 179 VDIGQNRLFTWLREHGYLIKRKGTDYNMPTQKAVAMGLFQIKETSITHSNGTVTLTKTAK 238
Query: 219 GEERGGKMCDVPM 231
+G +
Sbjct: 239 VTGKGQQYFINKF 251
>gi|57651252|ref|YP_185217.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus COL]
gi|57285438|gb|AAW37532.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus COL]
gi|315193395|gb|EFU23792.1| prophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus CGS00]
Length = 263
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 AIVRSDGREDTVLQTRW 239
>gi|300765043|ref|ZP_07075031.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL N1-017]
gi|300514343|gb|EFK41402.1| hypothetical protein LMHG_11509 [Listeria monocytogenes FSL N1-017]
Length = 154
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
MS + F FE N++RT+ ++ F+ KDVA LGY NS +A+ H KGV K
Sbjct: 1 MSNLQIFNFEGNEVRTVFIEN-EPHFIGKDVAKVLGYSNSRDALKRHVFLKNKGVVKHDS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
L GG Q + I+E +Y+L+ KS L SA++F+ WV EVLP++RK G+Y + +
Sbjct: 60 L---GGSQNLTAINEAGLYQLIFKSKLESAERFQDWVTSEVLPSVRKHGAYMTNDTIEKA 116
Query: 116 ATSASTVLRVHKHLEELAKQAG 137
T ++R+ +L+E +A
Sbjct: 117 ITDHDFLIRLATNLKEEKTKAD 138
>gi|304439200|ref|ZP_07399118.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372332|gb|EFM25920.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 277
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 33/248 (13%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-- 57
M+ I F E IRT+V + WFV KD+A LGY NS++A+ H + K++ +
Sbjct: 16 MN-IEIFRNSEFKDIRTMVM-NGEPWFVGKDIAENLGYSNSSKAVINHVETEDKQFIMLD 73
Query: 58 -------KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G K +I+E +Y L++ S LP A+KF+RWV EVLP++R+ G Y+ +
Sbjct: 74 LADSQNGNVPKGQTKTAVINESGLYSLILSSKLPQAKKFKRWVTSEVLPSIRRHGMYATD 133
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
VL K E ++ LK L +K K + D +
Sbjct: 134 ELLDNPDLFILVLEELKR--ERQEKLILKQQNLEMK-----PKASYYDIV---------- 176
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
E + IT I + AR +NK L + G+Q + + E G C
Sbjct: 177 LSCKEAVAITVISKDYGW--SARKMNKKLHELGVQFKQ-GNIWLLYQDYAEEG-YTCTKT 232
Query: 231 MQHVEGST 238
+G+
Sbjct: 233 YSFNKGNG 240
>gi|82751476|ref|YP_417217.1| phage anti-repressor protein [Staphylococcus aureus RF122]
gi|82657007|emb|CAI81444.1| phage anti-repressor protein [Staphylococcus aureus RF122]
Length = 262
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 AIVRSDGREDTVLQTRW 239
>gi|320352343|ref|YP_004193682.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120845|gb|ADW16391.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 252
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 65/110 (59%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M ITPF F + +RT+ D WFVAKDVA LGY N+ +AI+ HCKGV K YPL+T
Sbjct: 1 MPEITPFCFNDSMVRTLT-IDNAPWFVAKDVAELLGYANTKDAISRHCKGVVKHYPLRTA 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
GGIQ++RII+EP++YRL+ S LP+A+KFE W++EEVLP++RKTGSYS +
Sbjct: 60 GGIQEIRIINEPNLYRLVAHSKLPAAEKFEAWIYEEVLPSIRKTGSYSQD 109
>gi|237714170|ref|ZP_04544651.1| bro family antirepressor [Bacteroides sp. D1]
gi|262408452|ref|ZP_06084999.1| bro family antirepressor [Bacteroides sp. 2_1_22]
gi|293368921|ref|ZP_06615522.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CMC 3f]
gi|294644479|ref|ZP_06722239.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CC 2a]
gi|294808551|ref|ZP_06767297.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
xylanisolvens SD CC 1b]
gi|229445662|gb|EEO51453.1| bro family antirepressor [Bacteroides sp. D1]
gi|262354004|gb|EEZ03097.1| bro family antirepressor [Bacteroides sp. 2_1_22]
gi|292635941|gb|EFF54432.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CMC 3f]
gi|292640170|gb|EFF58428.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
ovatus SD CC 2a]
gi|294444232|gb|EFG12953.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
xylanisolvens SD CC 1b]
Length = 257
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 113/231 (48%), Gaps = 23/231 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ ++ FE E +IRT ++ D IWF A DVA ALGY N +A+ HCK GV Y
Sbjct: 1 MNKVSIFEHPEFGRIRT-LEIDGKIWFCASDVAAALGYSNPRDAVVRHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y ++
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKNGGYLLKKNGETDN 118
Query: 118 S--ASTVLRVHKHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
A +L ++E + ++N +LK+ K+ D++
Sbjct: 119 ELLARAILLAQNRIKERDSRISALEKENNYAILKLKLQAPKVQYYDKV----------LQ 168
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ T TQI + L A LNK L G+Q + SG + + +G
Sbjct: 169 SQSTYTTTQIAKELG--MTAGMLNKRLRWAGIQFRQ-SGQWLLKAPYQNQG 216
>gi|66395309|ref|YP_239604.1| ORF016 [Staphylococcus phage 69]
gi|148717850|ref|YP_001285322.1| antirepressor [Staphylococcus phage 80alpha]
gi|282919842|ref|ZP_06327574.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|62635660|gb|AAX90771.1| ORF016 [Staphylococcus phage 69]
gi|103058636|gb|ABF71579.1| antirepressor [Staphylococcus phage 80alpha]
gi|282316480|gb|EFB46857.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
Length = 262
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 AIVRSDGREDTVLQTRW 239
>gi|304443272|ref|YP_003857102.1| phage anti-repressor [Staphylococcus phage SAP-26]
gi|302749880|gb|ADL66965.1| phage anti-repressor [Staphylococcus phage SAP-26]
Length = 263
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 TIVRSDGREDTVLQTRW 239
>gi|66395521|ref|YP_239897.1| ORF013 [Staphylococcus phage 42E]
gi|88195764|ref|YP_500573.1| bacteriophage L54a, antirepressor [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|62636014|gb|AAX91125.1| ORF013 [Staphylococcus phage 42E]
gi|87203322|gb|ABD31132.1| bacteriophage L54a, antirepressor, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|329725140|gb|EGG61630.1| BRO family, N-terminal domain protein [Staphylococcus aureus subsp.
aureus 21189]
Length = 263
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY S+ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 TIVRSDGREDTVLQTRW 239
>gi|265755711|ref|ZP_06090332.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
gi|263234317|gb|EEZ19910.1| BRO family antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 258
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 20/220 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKTEGGIQKVRI 68
E KIRT+ +KD IWF AKDVA +LGY N+ +AI+ HCK + + T GG QK++
Sbjct: 11 EFGKIRTV-EKDGKIWFCAKDVAASLGYANTRDAIDRHCKQKGVCVHDIPTTGGRQKIKF 69
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS--ASTVLRVH 126
I E ++YRL+ S LPSA++FE W+F++++P K G Y ++ + + +L
Sbjct: 70 IDEGNMYRLIAGSRLPSAERFESWIFDDLVPRTLKEGGYLLDIKGETDSELLSRALLLAE 129
Query: 127 KHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
++E + + K+ Q +K++R K+ +++ + T TQI
Sbjct: 130 NRIKERDRHISVLEEKNAQNAIKLSRQAPKVRYFEEI----------LHSASTYTTTQIA 179
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L R LN L G+Q + SG + T + + G
Sbjct: 180 KELG--MSGRELNYRLKLLGVQFRQ-SGTWMLTARYHKEG 216
>gi|301170189|emb|CBW29793.1| conserved hypothetical protein [Haemophilus influenzae 10810]
Length = 225
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Query: 1 MS---TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
M+ + F F+SN +R I DK+Q WF A DV LGY NS +AI+ HCK GVAKR
Sbjct: 1 MNTQIQFSAFTFKSNSVRVITDKNQEPWFCANDVCDILGYSNSRDAISKHCKTGGVAKRD 60
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
T+ +Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 61 T-PTKSAVQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLA 119
Query: 116 ATSAST 121
+
Sbjct: 120 LSEPEK 125
>gi|304438141|ref|ZP_07398084.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368914|gb|EFM22596.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 288
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV------AKR 54
M+ I +R + KD N W A+DVA G+ ++ N + +
Sbjct: 1 MANIMTI----GNVRGYIAKDGNAWLNAEDVARGWGFTQIAKSGNEVVRWERVNSYLKEF 56
Query: 55 YPLKTEG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA-- 111
+ T G GI+ + E VYRL K+ AQ F+ + +EVLP +RKTGSY+V
Sbjct: 57 GFIPTSGDGIKPGDFLPENMVYRLGFKANNERAQLFQAKLADEVLPAIRKTGSYTVPKLE 116
Query: 112 --PKLRATSASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
PK R T +R +H EL K G+K L K + + GVD E ++
Sbjct: 117 KNPKYRTRMVGTAVRDIHSTAAELQKLFGVKSGIALAKATSMIERAYGVDMEEVKELIP- 175
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
P+ +L TQIG RL AR N LL GLQV +G +R T KG+ G +M
Sbjct: 176 PAEHETGFLNATQIGARLGV--NARKANALLQNAGLQVR-FNGMWRLTNKGKCYGEEM-- 230
Query: 229 VPMQHVEGSTQQLKWNSNLLVSF 251
P + S Q++WN +++
Sbjct: 231 -PYERNGHSGYQIRWNDSVVSVL 252
>gi|145295994|ref|YP_001138815.1| hypothetical protein cgR_1918 [Corynebacterium glutamicum R]
gi|57158152|dbj|BAD84121.1| putative antirepressor [Corynebacterium glutamicum]
gi|140845914|dbj|BAF54913.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 260
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I PF F+ +++R + +D +VA DV+ LG+ ++ +T
Sbjct: 1 MS-IQPFNFQGHEVRVVQGQDGQPLWVAIDVSRVLGFSEASAMTRHLDDEEKGLSSWQTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
GG Q++ I+E +Y +++S P A++F+RWV EVLP++R+ G Y + A
Sbjct: 60 GGSQQMITITESGLYSAILRSRKPEAKEFKRWVTGEVLPSIRRHGGYLTDQKIAEALDDP 119
Query: 120 STVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++R+ L EE A++A L+ Q + K+ D + + +
Sbjct: 120 DTIIRLATSLKEERARRAALETQQKI-----DAPKVVFADAVAVS----------NTAIL 164
Query: 179 ITQIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPK 218
+ + + L A L L + G + + + PT K
Sbjct: 165 VGDLAKLLKGNGINVGANRLFDWLRENGYLIRRKGTDWNMPTQK 208
>gi|319775359|ref|YP_004137847.1| prophage antirepressor [Haemophilus influenzae F3047]
gi|329122641|ref|ZP_08251220.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
gi|317449950|emb|CBY86162.1| Possible prophage antirepressor [Haemophilus influenzae F3047]
gi|327472655|gb|EGF18084.1| phage antirepressor protein [Haemophilus aegyptius ATCC 11116]
Length = 214
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 25/203 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
+ F F++ +RTI D + IWF DV LGY N+ +A+ HCK G+AKRY T
Sbjct: 6 QFSTFNFKNFPVRTITDPNSEIWFCGTDVCDILGYSNAPDALRKHCKPKGIAKRYT-PTV 64
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q++ ISEP++YRL VKS P A+ FE W+FEEVLP +RKTG Y + P L +
Sbjct: 65 GGEQEMIFISEPNLYRLTVKSRKPEAEPFEEWIFEEVLPQIRKTGKYEISQPALPMPEPT 124
Query: 121 TV------------------LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
R+ LE L K L ++ +V VT+ V ++
Sbjct: 125 YAQSFSQQDINNLVWLLFSHERMRFLLENLYKPLALFNSPFAPQVYGNVTEYKRVHKIAK 184
Query: 163 MDIK----HLPSSDNDEYLTITQ 181
IK L S + +++ +T+
Sbjct: 185 PLIKKLLDKLQSDNPEKWRHLTR 207
>gi|295086054|emb|CBK67577.1| Prophage antirepressor [Bacteroides xylanisolvens XB1A]
Length = 258
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 20/220 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKTEGGIQKVRI 68
E KIRT+ +KD IWF AKDVA +LGY N+ +AI+ HCK + + T GG QK++
Sbjct: 11 EFGKIRTV-EKDGKIWFCAKDVAASLGYANTRDAIDRHCKQKGVCVHDIPTRGGRQKIKF 69
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS--ASTVLRVH 126
I E ++YRL+ S LPSA++FE W+F++++P K G Y ++ + + +L
Sbjct: 70 IDEGNMYRLIAGSRLPSAERFESWIFDDLVPRTLKEGGYLLDIKGETDSELLSRALLPAE 129
Query: 127 KHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
++E + + K+ Q +K++R K+ +++ + T TQI
Sbjct: 130 NRIKERDRHISVLEEKNAQNAIKLSRQAPKVRYFEEV----------LHSASTYTTTQIA 179
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L R LN L G+Q + SG + T + + G
Sbjct: 180 KELG--MSGRELNYRLKLLGVQFRQ-SGTWMLTARYHKEG 216
>gi|258440878|ref|ZP_05690713.1| phage anti-repressor protein [Staphylococcus aureus A8115]
gi|282894662|ref|ZP_06302889.1| antirepressor [Staphylococcus aureus A8117]
gi|257852392|gb|EEV76313.1| phage anti-repressor protein [Staphylococcus aureus A8115]
gi|282762939|gb|EFC03072.1| antirepressor [Staphylococcus aureus A8117]
Length = 262
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 223 TIVRSDGREDTVLQTRW 239
>gi|257440157|ref|ZP_05615912.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
gi|307693733|ref|ZP_07635970.1| putative antirepressor [Ruminococcaceae bacterium D16]
gi|257197509|gb|EEU95793.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 20/226 (8%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F+ E +IRT + ++ WFVA DV AL NS++AI+ + E
Sbjct: 3 NKIEVFKNEQFGEIRTALIEN-EPWFVAVDVCRALEIGNSSQAISRLDADEKMITLISNE 61
Query: 61 G---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
G G + +++EP +Y L++ S P A+ F+RW+ +V+P +RKTG Y +
Sbjct: 62 GNKRGNPNMTVVNEPGLYTLILSSRKPEAKAFKRWITHDVIPMIRKTGGYMTD------- 114
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
S + R+ K + + A L+L+ NR ++ + + + D+
Sbjct: 115 --SLLERIQKEPAVIVEFAQ----ALILEKNRVKALECELNTAKPKADYYDAFINPDDCT 168
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I + L P+ R + LLK SG P K G
Sbjct: 169 NIRTTAKELKIPE--RKFVQFLLKEKYLFRSPSGQLLPYNKDSNAG 212
>gi|253570718|ref|ZP_04848126.1| bro family antirepressor [Bacteroides sp. 1_1_6]
gi|251839667|gb|EES67750.1| bro family antirepressor [Bacteroides sp. 1_1_6]
Length = 258
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 26/223 (11%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQKVR 67
E K+RT+ + +WF A+DVA+ALGY N +A+N HC KGV + L T GG QKV+
Sbjct: 11 EFGKVRTV-EAGGRVWFCARDVASALGYANPKDAVNRHCRPKGV-CVHDLLTAGGRQKVK 68
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
I E ++YRL+ S LPSA++FE W+F+E++P K G Y +E K T A + R +
Sbjct: 69 FIDEGNLYRLMACSRLPSAERFESWIFDELVPRTLKEGGYLLE--KEGETDAELLSRTLQ 126
Query: 128 HLEELAKQ-----AGLKDNQLL--LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
E K+ +GL+ L LK++ K+ D ++ H PS+ T+T
Sbjct: 127 LAEAKLKERDRYISGLEKENALNALKLSLQAPKVRYFD-----EVLHSPST-----YTVT 176
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI + L R LN+ L G+Q + G + T + ++ G
Sbjct: 177 QIAKELG--MSGRELNRRLKALGIQFR-LGGTWLLTARYQKEG 216
>gi|148912801|ref|YP_001293380.1| Conserved hypothetical protein; putative antirepressor [Pseudomonas
phage F10]
Length = 265
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---L 57
M+ + P++F S +++ +VD++ WF+A +VA LGY ++ E + L
Sbjct: 1 MN-LIPYDFNSKRLQVLVDENGEPWFIAMEVAEILGYSDAYEMTKRLDEDEKSNRQIAGL 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T G + V I+E +Y ++ S P A+ F+RWV +VLP++R+TGSYS+ + A
Sbjct: 60 GTASGGRGVTTINESGLYSSIIGSNKPEAKPFKRWVTHDVLPSIRRTGSYSIGHQQAPAL 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
++ + +E +++ L + L R K+ D L A + P D ++
Sbjct: 120 TSDA----CQIIESMSRTLNLAPSATLGMYQRLGAKVGHADLLPAYTVDS-PDQDGTSHV 174
Query: 178 TI--TQIGERLNPPQRARFLNKLLLKRGLQVS---------KVSGGYRPTPKGEERGGKM 226
T + + AR + KL+ GL + T KG G +
Sbjct: 175 TAALSDLLRSHEVQASARQVYKLMEAAGLVERLSRPSSKGNGTREFWALTEKGLAFGKNL 234
>gi|29028570|ref|NP_803260.1| anti-repressor [Staphylococcus phage 11]
gi|18920494|gb|AAL82235.1| anti-repressor [Staphylococcus phage 11]
Length = 274
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY S+ AI H K +
Sbjct: 12 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSA 70
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 71 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 130
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 131 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 176
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + +
Sbjct: 177 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTI 233
Query: 230 PMQHVEGSTQ---QLKW 243
+ +G Q +W
Sbjct: 234 TIVRSDGREDTVLQTRW 250
>gi|291457579|ref|ZP_06596969.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
gi|291380632|gb|EFE88150.1| toxin-antitoxin system, toxin component, Bro family
[Bifidobacterium breve DSM 20213]
Length = 259
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 104/253 (41%), Gaps = 23/253 (9%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F+F+ +R + D++ WF+AKDV LG ENS +A +
Sbjct: 1 MNTEIQRFDFKGAALRALTDENGEPWFIAKDVCDVLGLENSRKATAELDSDEKNTVTISD 60
Query: 60 E-GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRA 116
G IISEP +Y L++KS P A++F+RWV EVLP +RKTG Y + +A
Sbjct: 61 GIAGNPNKTIISEPGLYCLVMKSRKPEAKEFKRWVTHEVLPQIRKTGGYIPTTDADDDMT 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
A V+ + +EE ++ +++ + K D + A D
Sbjct: 121 ILAKAVMIGQRTMEEQKRRIAAQESHIK----ELEPKARFADAVAASD----------GT 166
Query: 177 LTITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQH 233
I ++ + L N+L L + G S PT K + G + +
Sbjct: 167 CLIGELAKMLRQNGLDIGQNRLFEILRQDGYLGKTGSNRNVPTQKAMDLG--LFRIKETA 224
Query: 234 VEGSTQQLKWNSN 246
+ S + N
Sbjct: 225 ITHSDGHVTINRT 237
>gi|237718973|ref|ZP_04549454.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229451751|gb|EEO57542.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 257
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ + FE E +IRT ++ D IWF A DVA ALGY N +A+ HCK GV Y
Sbjct: 1 MNKVLIFEHPEFGRIRT-LEIDGKIWFCASDVAAALGYSNPRDAVVRHCKPMGVVV-YDT 58
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T +QK++ ISE +VYRL+ S LPSA+KFE W+F+E++P K G Y ++
Sbjct: 59 PTRSAVQKIKYISEGNVYRLIAGSKLPSAEKFESWIFDELVPETLKNGGYLLKKNGETDN 118
Query: 118 S--ASTVLRVHKHLEELAKQAGL---KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
A +L ++E + ++N +LK+ K+ D++
Sbjct: 119 ELLARAILLAQNRIKERDSRISALEKENNYAILKLKLQAPKVQYYDKV----------LQ 168
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ T TQI + L A LNK L G+Q + SG + + +G
Sbjct: 169 SQSTYTTTQIAKELG--MTAGMLNKRLRWAGIQFRQ-SGQWLLKAPYQNQG 216
>gi|167462755|ref|ZP_02327844.1| putative phage antirepressor protein [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 264
Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R +V KD + W+VAKDV+ LG+ +++ ++T
Sbjct: 14 MNQLQVFNFTGKDVRVVV-KDGHPWWVAKDVSELLGFRMASDFTRTLDDDEKDTQIVRTP 72
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q+V II+E +Y ++KS P A++F+RWV EVLP +RKTG Y+ +
Sbjct: 73 GGNQEVTIINESGLYSAILKSRKPEAKQFKRWVTHEVLPAIRKTGMYATDELL---DDPE 129
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI--------------- 165
+++ L+E + QL +V K+ D + A
Sbjct: 130 LLIQAVTKLKEEREVRR----QLEAQVKSDRPKVLFADSVTASPTSILVGELAKMLKQNG 185
Query: 166 -----KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR 202
K L + I + G N P QRA + +K
Sbjct: 186 FDIGEKRLFEWMRKQGYLIKRKGTDRNIPTQRAMEMGLFEIKE 228
>gi|167463768|ref|ZP_02328857.1| phage antirepressor protein [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 234
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R I+ KD W++AKD+ + L + + + A+ + L
Sbjct: 1 MNQLQVFNFTGKDVRVIM-KDGQPWWLAKDICSVLDHSDVSMAVKRLDEDEKLTQTLFVS 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + V ++EP +Y L++ S P A++F+RWV EVLP +RKTG Y+ + +
Sbjct: 60 GQNRNVWFVNEPGLYSLILTSRKPEAKQFKRWVTHEVLPAIRKTGMYATDELL---DNPD 116
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+++ L+E + L ++Q+ + K+ + LE + I
Sbjct: 117 FLIQAATKLKEEREARKLLESQI----EQDRPKVIFAEALETS----------KSSILIG 162
Query: 181 QIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERG 223
++ + L N+L L G K PT K E G
Sbjct: 163 ELAKLLKQNGINVGQNRLFNWLRAEGYLGRKGDYRNLPTQKSMELG 208
>gi|144898901|emb|CAM75765.1| BRO, N-terminal [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ I PFEFE + IR +VD D WFV KDVA LGY N+ +AIN HC+GVAKRYP+
Sbjct: 1 MTNIVPFEFEGSAIR-VVDIDGAPWFVGKDVAERLGYANATDAINKHCRGVAKRYPIIDA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q+ RI+SEPDV RL+V S LP+A +FERWVFEEVLPT+R TG + K +
Sbjct: 60 LGRTQEARILSEPDVLRLIVGSKLPAAVRFERWVFEEVLPTIRTTGGSDIGTTKADDIAQ 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQL--LLKVNRGVTKITGVDQLEAMDIKHLP 169
V L + +Q G D ++ LL V + V + KHL
Sbjct: 120 EAARIVLARLGMVPEQIGALDGKVDRLLTVTNELAMNRRVTIPVNVVKKHLS 171
>gi|239998687|ref|ZP_04718611.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|268594538|ref|ZP_06128705.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268547927|gb|EEZ43345.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
Length = 281
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG Y + T+
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGYQITPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY-- 176
A + + + L + G+ + +++ V+ +E + LP + +
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVESVEDLPAGKLPEAVAYVHAL 171
Query: 177 -LTITQIGERLNPPQRAR 193
L GE L+ P +A
Sbjct: 172 TLHTGLTGEVLDAPPKAE 189
>gi|167463798|ref|ZP_02328887.1| putative phage antirepressor protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383795|ref|ZP_08057546.1| hypothetical protein PL1_1715 [Paenibacillus larvae subsp. larvae
B-3650]
gi|322384421|ref|ZP_08058106.1| hypothetical protein PL1_2765 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321150751|gb|EFX44212.1| hypothetical protein PL1_2765 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152007|gb|EFX44950.1| hypothetical protein PL1_1715 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 250
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F +R I+ KD W++AKD+ + L + + + A+ + L
Sbjct: 1 MNQLQVFNFTGKDVRVIM-KDGQPWWLAKDICSVLDHSDVSMAVKRLDEDEKLTQTLFVS 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + V ++EP +Y L++ S P A++F+RWV EVLP +RKTG Y+ + +
Sbjct: 60 GQNRNVWFVNEPGLYSLILTSRKPEAKQFKRWVTHEVLPAIRKTGMYATDELL---DNPD 116
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+++ L+E + L ++Q+ + K+ + LE + I
Sbjct: 117 FLIQAATKLKEEREARKLLESQI----EQDRPKVIFAEALETS----------KSSILIG 162
Query: 181 QIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERG 223
++ + L N+L L G K PT K E G
Sbjct: 163 ELAKLLKQNGINVGQNRLFNWLRAEGYLGRKGDYRNLPTQKSMELG 208
>gi|194098248|ref|YP_002001304.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|193933538|gb|ACF29362.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
Length = 281
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG Y + T+
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGYQITPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY-- 176
A + + + L + G+ + +++ V+ +E + LP + +
Sbjct: 116 ADDRTGLRRAVAALVGRKGIDYSSAYSMIHQRF----NVESVEDLPAGKLPEAVAYVHAL 171
Query: 177 -LTITQIGERLNPPQRAR 193
L GE L+ P +A
Sbjct: 172 TLHTGLTGEVLDAPPKAE 189
>gi|256850685|ref|ZP_05556110.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
gi|256712553|gb|EEU27549.1| Lj928 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
Length = 294
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + F+FE+ +R I+ + WFV KD+ LGY + IN+H K + ++T
Sbjct: 1 MNDLEFFDFENQPVR-ILKIENEPWFVGKDLTNILGYTHGARDINSHVADEDKLKSQIRT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G +++ +++E +Y L++ S +P+A+KF+ WV EVLPT+RK G+Y + T
Sbjct: 60 AGQMREQILVNESGLYSLILSSKMPNAKKFKHWVTHEVLPTIRKHGAYMTDEKIEEVLTD 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++++ L++ +Q ++ N+ V +++ + + + +
Sbjct: 120 PDTIIKLATQLKDERQQRLIEQQLRKDAENQ-------VHEMKPKALFADSVATSKSTIL 172
Query: 179 ITQIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQHV 234
I ++ + L A L K + G +S+ + PT + G + + +
Sbjct: 173 IGELAKILRGNGVDIGATRLFKWMRANGYLISRKGSDWNMPTQRAMNLG--LFKIKETTI 230
Query: 235 EGST 238
S
Sbjct: 231 NHSN 234
>gi|48697283|ref|YP_025050.1| putative antirepressor protein [Lactobacillus phage phiAT3]
gi|47607174|gb|AAT36510.1| putative antirepressor protein [Lactobacillus phage phiAT3]
Length = 254
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT+ + IWF A DV AL N+ A+ + ++ L
Sbjct: 1 MNELQLFQFEDNQIRTV-SSNGIIWFSAPDVTNALKLTNTTVALKSLDGDEVTKFNLGGL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
G + ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y +A +
Sbjct: 60 SG--ETNFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAYMTPETIEKAIYNP 117
Query: 120 STVLRVHKHLE-ELAKQAGL-------------------KDNQLLLKVNRGVTKITGVDQ 159
++ + L+ E AK A L +L+ V K GVD
Sbjct: 118 DFIINLATQLKDEQAKTAALTADNETMKPKALFADAVATSHTTILVGDLAKVLKQNGVD- 176
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG--GYRPT 216
+ K L + ++ I +IG N P QRA L +K +S G + T
Sbjct: 177 ---IGAKRLFAWLREQGYLIKRIGADYNSPTQRAMELGLFEVKE-TAISHSDGHVTVQKT 232
Query: 217 PKGEERGGKMCDVPM 231
PK +G +
Sbjct: 233 PKVTGKGQQYFINKF 247
>gi|206563728|ref|YP_002234491.1| hypothetical protein BCAM1879 [Burkholderia cenocepacia J2315]
gi|198039768|emb|CAR55739.1| hypothetical phage protein [Burkholderia cenocepacia J2315]
Length = 265
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ + IRT+ + +FVA+DVA LGY N +AI HCKGV K T
Sbjct: 1 MNNGLLSFDHDGATIRTLTVE-GEPYFVARDVAEILGYSNYRDAIARHCKGVVKHDT-PT 58
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG+Q++ I E DVYRL+++S LP A++FE WV VLP++RK+GSY+V+ +
Sbjct: 59 VGGMQELTYIPERDVYRLVMRSKLPGAERFEEWVVGTVLPSIRKSGSYAVQPAFETPRTL 118
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
LR+ LEE +++ + + + + A + + I
Sbjct: 119 VEALRLAADLEEKRAALEVENKHQAQLIEYHKPDVQFAEAMRASEDLVDIPTVAKTLSKI 178
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
IG P Q AR L + G+ K P K G
Sbjct: 179 KPIG----PIQLARA----LKECGI-FRKDHKENLPMQKFVNAG 213
>gi|309378131|emb|CBX23230.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 282
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ + +RT+ D +WF+A DV LGY N +A+ +CK GV+ RY L
Sbjct: 1 MNAVQVLNFQQSSVRTVADNKGELWFLANDVCEILGYSNPRQAVQKNCKEKGVSNRYTL- 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q + I+EP++YRL++KS P+A+ FE WV E VLPT+RKTG Y + T+
Sbjct: 60 TRGGEQSMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPTIRKTGGYQITPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + L + G+ + +++ V+ +E + ++ LP + Y+
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPVEKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|312134841|ref|YP_004002179.1| prophage antirepressor [Caldicellulosiruptor owensensis OL]
gi|311774892|gb|ADQ04379.1| prophage antirepressor [Caldicellulosiruptor owensensis OL]
Length = 246
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F+ E +IR I+ KD WFV KD+A L Y+ ++AI H + + +YP+
Sbjct: 1 MNDLQIFKNEEFGEIR-IIMKDNEPWFVGKDIAEILKYKEPHKAIVRHVEEEDRMKYPIP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GGIQ+ II+E +Y L++ S LP A+KF++WV EVLP +RKTG Y T
Sbjct: 60 TNGGIQESWIINESGLYSLILSSELPEAKKFKKWVTSEVLPAIRKTGGYVHNDEVFIETY 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ K L + + K N+L + Q++ + +
Sbjct: 120 LPFADDLTKALFKKTLETIRKQNEL-------------IKQMKPKADYFDALVERNLLTN 166
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L + R + LL +G G RP +
Sbjct: 167 FRNTAKEL--KIKEREFIQWLLDKGFVYRDRQGNLRPYAQY 205
>gi|329737799|gb|EGG74035.1| BRO family, N-terminal domain protein [Staphylococcus epidermidis
VCU028]
Length = 238
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-PLKT 59
M + F FE +RT+ ++ +FV KDVA LGY N+ +A+ H G K L T
Sbjct: 1 MQDLQIFNFEELPVRTLTV-NEEPFFVGKDVAEILGYSNTRDALYRHVDGEDKDVVKLDT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q II+E +Y L+ S L SA++F+RWV EVLPTLRKTG+Y + P +
Sbjct: 60 LGGKQSQTIINESGLYSLIFSSKLESAKRFKRWVTSEVLPTLRKTGTYQI--PNDPMQAL 117
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + +E + A +K + + +K N+ +L+A + + + + I
Sbjct: 118 KLMFEATEQTKE--EIATVKADVIDIKENQ---------KLDAGEYGLITKTVHQRVAYI 166
Query: 180 TQIGERLNPPQRARFLNKLLLK 201
QI + + +NK L +
Sbjct: 167 RQI----HGLPNNKEVNKPLYR 184
>gi|227535711|ref|ZP_03965760.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227186678|gb|EEI66745.1| antirepressor protein [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 254
Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FE N+IRT+ + IWF A DV AL N+ A+ + ++ L
Sbjct: 1 MNELQLFQFEDNQIRTV-SSNGIIWFSAPDVTNALKLTNTTVALKSLDGDEVTKFNLGGL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
G + ISEP +Y+L+ S P+A++F RWV EVLP++RK G+Y +A +
Sbjct: 60 SG--ETNFISEPGLYKLIGASRKPAAKRFNRWVTHEVLPSIRKHGAYMTPETIEKAIYNP 117
Query: 120 STVLRVHKHLE-ELAKQAGL-------------------KDNQLLLKVNRGVTKITGVDQ 159
++ + L+ E AK A L +L+ V K GVD
Sbjct: 118 DFIINLATQLKDEQAKTAALTADNETMKPKALFADAVATSHTTILVGDLAKVIKQNGVD- 176
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG--GYRPT 216
+ K L + ++ I +IG N P QRA L +K +S G + T
Sbjct: 177 ---IGAKRLFAWLREQGYLIKRIGADYNSPTQRAMELGLFEVKE-TAISHSDGHVTVQKT 232
Query: 217 PKGEERGGKMCDVPM 231
PK +G + +
Sbjct: 233 PKVTGKGQQYFINKL 247
>gi|281358555|ref|ZP_06245034.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281314903|gb|EFA98937.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 304
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 111/222 (50%), Gaps = 30/222 (13%)
Query: 1 MS--TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
MS ++ F FE S IR I D WFV KDV LGY N +A++ HCKG+ KRYPL
Sbjct: 1 MSKKELSVFNFEESTPIRVIT-IDGEQWFVGKDVCQVLGYTNPAKAMSDHCKGITKRYPL 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+T GG Q+VRI+SE DV RL+ S LP+AQKFERWVFEEVLP +R+TGSY+ AP + +
Sbjct: 60 ETAGGKQEVRILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYA--APSVPSV 117
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + +L L + + + + + LP +
Sbjct: 118 P-------------VRESPCSEQPELPLSAPQFLPEAVY----RGVPVISLPHLAQQLGV 160
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
T QI L+ + N L +V GGY G
Sbjct: 161 TPNQIHSALHNNRAGLIENTELF-------RVKGGYALRAAG 195
>gi|256839925|ref|ZP_05545434.1| bro family antirepressor [Parabacteroides sp. D13]
gi|256738855|gb|EEU52180.1| bro family antirepressor [Parabacteroides sp. D13]
Length = 258
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 20/219 (9%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGGIQKVRII 69
K+RTI + + +WF A DVA ALGY N+N+AI HCK Y + T GG QKV+ I
Sbjct: 12 FGKVRTI-ENEGKMWFCAADVAQALGYVNTNDAIARHCKTKGIVFYDIPTAGGRQKVKFI 70
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS--ASTVLRVHK 127
E ++YRL+ S LPSA++FE W+F+E++P K G Y +E + ++
Sbjct: 71 DEGNLYRLIAGSRLPSAERFESWIFDELVPRTLKEGGYLLEKKGETDAELLSRALMLAEN 130
Query: 128 HLEELAKQ-AGLKDNQLL--LKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGE 184
L+E ++ + LK L L++ KI D++ + T TQI +
Sbjct: 131 KLKERERRISELKKENALNTLRLGLQAPKIRYFDEV----------LRSSSTYTPTQIAK 180
Query: 185 RLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L R LN L G+Q + SG + T + ++ G
Sbjct: 181 ELG--MSGRELNLRLKALGIQFRQ-SGTWMLTARYQKEG 216
>gi|281357128|ref|ZP_06243617.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281316159|gb|EFB00184.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 357
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 111/222 (50%), Gaps = 30/222 (13%)
Query: 1 MS--TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
MS ++ F FE S IR I D WFV KDV LGY N +A++ HCKG+ KRYPL
Sbjct: 1 MSKKELSVFNFEESTPIRVIT-IDGEQWFVGKDVCQVLGYTNPAKAMSDHCKGITKRYPL 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+T GG Q+VRI+SE DV RL+ S LP+AQKFERWVFEEVLP +R+TGSY+ AP + +
Sbjct: 60 ETAGGKQEVRILSEADVMRLICGSKLPAAQKFERWVFEEVLPAIRRTGSYA--APSVPSV 117
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + +L L + + + + + LP +
Sbjct: 118 P-------------VRESPCSEQPELPLSAPQFLPEAVY----RGVPVISLPHLAQQLGV 160
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
T QI L+ + N L +V GGY G
Sbjct: 161 TPNQIHSALHNNRAGLIENTELF-------RVKGGYALRAAG 195
>gi|9107709|gb|AAF85304.1|AE004058_5 hypothetical protein XF_2506 [Xylella fastidiosa 9a5c]
Length = 460
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I PF+F S+ +R ++ +D N WFVA DV TALGY N ++A+ H K
Sbjct: 189 MSQSIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGYRNPSKAVADHLDDDEKSNQSLG 247
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V IISE +Y L+++S P A+KF +WV EVLP++RKT Y+V P L
Sbjct: 248 LAG-KPVIIISESGLYALVLRSRKPEARKFSKWVTSEVLPSIRKTCEYTV-HPDLGYDQM 305
Query: 120 STVLRVHKHLEEL--AKQAGLKDNQLLLK 146
+ + K + L A + D + LL+
Sbjct: 306 RSYSKDRKQMAALNTAHSRWISDVRRLLE 334
>gi|77747607|ref|NP_299784.2| hypothetical protein XF2506 [Xylella fastidiosa 9a5c]
Length = 272
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I PF+F S+ +R ++ +D N WFVA DV TALGY N ++A+ H K
Sbjct: 1 MSQSIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGYRNPSKAVADHLDDDEKSNQSLG 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + V IISE +Y L+++S P A+KF +WV EVLP++RKT Y+V P L
Sbjct: 60 LAG-KPVIIISESGLYALVLRSRKPEARKFSKWVTSEVLPSIRKTCEYTV-HPDLGYDQM 117
Query: 120 STVLRVHKHLEEL--AKQAGLKDNQLLLK 146
+ + K + L A + D + LL+
Sbjct: 118 RSYSKDRKQMAALNTAHSRWISDVRRLLE 146
>gi|224282988|ref|ZP_03646310.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313140143|ref|ZP_07802336.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
gi|313132653|gb|EFR50270.1| phage antirepressor protein [Bifidobacterium bifidum NCIMB 41171]
Length = 260
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 94/246 (38%), Gaps = 27/246 (10%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F+F +RT+ DK WFVAKDV LG+ N + A++ ++ L
Sbjct: 1 MNNEIQRFDFRGALLRTLTDKAGEPWFVAKDVCDILGHSNVSMALDRLDDDERSKFNLGR 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA--- 116
+G + I++E +Y L++ S P A +F+RWV EVLP++R+TG Y
Sbjct: 61 QG---ETNIVNEAGLYVLVLGSRKPEAHEFKRWVTHEVLPSIRRTGGYIPTTDADDDMTI 117
Query: 117 -------------TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
+ + EL +A D V ++ + + M
Sbjct: 118 LAKAVMIGQRTMEAQKRKIAEQQTRIVELEPKARFADAVAASDGTCLVGELAKMLRQNGM 177
Query: 164 DI--KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVS-----KVSGGYRPT 216
DI L + R P QRA L +K VS + T
Sbjct: 178 DIGQNRLFRLLQADGYLGKSGSNRNVPTQRAMDLGLFRIKETTVTHADGHTTVSRTPKVT 237
Query: 217 PKGEER 222
KG+
Sbjct: 238 GKGQRY 243
>gi|307544693|ref|YP_003897172.1| prophage antirepressor [Halomonas elongata DSM 2581]
gi|307216717|emb|CBV41987.1| prophage antirepressor [Halomonas elongata DSM 2581]
Length = 262
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 21/250 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-T 59
M +I PF F+S ++R I D FVAKDVA ALGY N A+ H + T
Sbjct: 1 MQSIQPFNFDSQQVRVIQGDDGEPMFVAKDVAAALGY-NWQVALVKHVPEEWRGVTQSNT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G+Q++ +++E +Y + +S P A F++W+ EVLP++RKTG Y + A
Sbjct: 60 PSGVQRLTVLTEQGLYFFVARSDKPKALPFQKWLAGEVLPSIRKTGQYQAPGIEAANVPA 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL-- 177
+ L E A + + + R + G D D + + +
Sbjct: 120 TMA------LVECAANLLRASDSGKVVMLRKAGQAVGADTSFLPDYTEDSAPGHVGAMDT 173
Query: 178 -TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG--------YRPTPKGEERGGKMCD 228
++T + A +N++L G+ S+ + T G+ G +
Sbjct: 174 ASLTHLLREHGLSHSAAAVNQMLHDAGILESRTRKSTKGALKHFWCLTDAGQHYGKNVVS 233
Query: 229 --VPMQHVEG 236
P +
Sbjct: 234 PQSPRETQPH 243
>gi|291087469|ref|ZP_06346557.2| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
gi|291074759|gb|EFE12123.1| toxin-antitoxin system, toxin component, Bro family [Clostridium
sp. M62/1]
Length = 161
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F E ++RT++ + WFV KDVA L Y N +AI+ H K
Sbjct: 3 MNELQIFNNEEFGQVRTLIINN-EPWFVGKDVAEILNYTNPRKAISDHIDEEDKGVTKCD 61
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG+Q + II+E +Y L++ S LP+A++F+ WV EVLP++RKTG Y + T
Sbjct: 62 TLGGVQNLTIINESGLYSLILSSKLPNAKRFKHWVTSEVLPSIRKTGGYVNDDELFVNTY 121
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
+ K L + Q + N+++ +
Sbjct: 122 LPFADDMTKQLFKATLQTVRRQNEIIESQKERLP 155
>gi|125974155|ref|YP_001038065.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125714380|gb|ABN52872.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 265
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 21/230 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E +++ +V D +F A D A LGY N ++A+ HCK + KR
Sbjct: 1 MTNLQVFKNTEFGELKVLV-IDGKEYFPATDCARMLGYSNPHKAVIDHCKYLTKREVPHP 59
Query: 60 EGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ + + I E D++RL+VKS LP+A++FE+WVF+EVLPT+RK G Y+ +
Sbjct: 60 QNPEKTININYIPEGDLFRLIVKSQLPAAERFEKWVFDEVLPTIRKYGVYATDKVIEEMI 119
Query: 118 S-ASTVLRVHKHLE-ELAKQAGLKDNQLLLK--VNRGVTKITGVDQLEAMDIKHLPSSDN 173
S +R+ L+ E ++ L+ K ++ K + D + N
Sbjct: 120 SNPEYGIRIFSELKAERDRRKALEIENAKNKQIISELKPKASYYDLI----------LQN 169
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ I++I + RA NKLL + G+Q K+ + + ++G
Sbjct: 170 KSLVPISKIAKDYGMSGRA--FNKLLHELGVQY-KMGNCWLLYQEYADQG 216
>gi|169632805|ref|YP_001706541.1| putative prophage antirepressor [Acinetobacter baumannii SDF]
gi|169151597|emb|CAP00374.1| conserved hypothetical protein; putative prophage antirepressor
[Acinetobacter baumannii]
Length = 268
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS ++ F FE N +IR I+ + N WFVAKD+ ALG N +AI+ K T
Sbjct: 1 MSNLSVFNFEQNSQIR-IIMINSNPWFVAKDICDALGLSNHRDAISKLDKDEKGVALTDT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKST------LPSAQKFERWVFEEVLPTLRKTGSYSVEAP- 112
GG Q++ +I+E +Y L+++S P KF +WV EVLP++RKTG Y P
Sbjct: 60 LGGQQELSVINESGMYALVMRSRDAMKEGTPQ-HKFRKWVTSEVLPSIRKTGKYEAPKPI 118
Query: 113 -KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
K + + +L + + + A K + + + +TGV +++HLP
Sbjct: 119 EKRNYINNNDMLNIKRLIWCCAGHLDQK-QSVSSAIWYSLRNVTGVPSPAKFEVEHLPLL 177
Query: 172 DNDEYLTITQIGERLNPPQRAR 193
+ +I + P +AR
Sbjct: 178 AQE----FNRILSIIEPYLKAR 195
>gi|160898695|ref|YP_001564277.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364279|gb|ABX35892.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 270
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 4/214 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS ITPF+F+ ++I + + WF+AK+V+ LGY ++ L+T+
Sbjct: 1 MSNITPFKFQDHEITVLTNDSGEPWFIAKEVSGVLGYSEASAMTRTLDDDEKGLQVLQTQ 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q+V +I+E +Y ++KS A++F++WV EVLP++R+TGSY+ A + A
Sbjct: 61 GGTQRVIVINESGLYSAILKSERQEAKRFKKWVTSEVLPSIRRTGSYTGPAAQQMAAPLR 120
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ L A + +L + + GV L P+S T
Sbjct: 121 DQVDAGILLLRAAAEDLKFAPSAVLGGYQKLESHVGVAGLLPAYAVDAPASAAAGTSEPT 180
Query: 181 ----QIGERLNPPQRARFLNKLLLKRGLQVSKVS 210
++ + A+ NKLL++RG+ +
Sbjct: 181 KSLAELLKEFGVGISAQAFNKLLMQRGMLKEQER 214
>gi|254804765|ref|YP_003082986.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
gi|254668307|emb|CBA05261.1| putative prophage antirepressor protein [Neisseria meningitidis
alpha14]
Length = 282
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N +A+ +CK GV+ RY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYSNPRQAVQKNCKEKGVSNRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q + I+EP++YRL++KS P+A+ FE WV E VLPT+RKTG Y + + T+
Sbjct: 60 TRGGEQSMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPTIRKTGGYQIG----QRTT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
A + + + L + G+ + +++ V+ +E + + LP +
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDLPAEKLPEA 164
>gi|304389858|ref|ZP_07371817.1| phage antirepressor protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304327034|gb|EFL94273.1| phage antirepressor protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 260
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
TI F + ++R+ DQ WF+A D+ AL N + A++ ++ L G
Sbjct: 4 TIQTFTNDRFGQVRSFTANDQT-WFIATDICQALDLTNPSVAVSRLDADEKAKFNLGFSG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G ++EP +Y L++ S A+ F+RWV EVLP++R+ G Y+ + T+
Sbjct: 63 GA--TWCVNEPGLYALIMASRKSEAKAFKRWVTHEVLPSIRRYGLYATDEL---VTNPEA 117
Query: 122 VLRVHKHLEELAKQAG---LKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+L+V ++ L++ + K++ D + + + L
Sbjct: 118 LLKVLDAYVAERRKTAELTLQNLAQAQALAEAKPKLSYYDMV----------LEAKDALP 167
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
IT I + R LN+LL + G+Q + SG + + G
Sbjct: 168 ITVIAKDYGL--SGRKLNQLLHELGIQYKQ-SGVWLLYARHAGNG 209
>gi|312962012|ref|ZP_07776509.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
gi|311283822|gb|EFQ62406.1| hypothetical protein PFWH6_3932 [Pseudomonas fluorescens WH6]
Length = 283
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 77/247 (31%), Positives = 110/247 (44%), Gaps = 24/247 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PF+F+ IR I DK + WFVA+DVA ALGY A++ HCK +
Sbjct: 28 SAVIPFDFDGAAIRVITDKLGDPWFVARDVADALGYSKPENAVSRHCKA----ATTTPKQ 83
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G + II E D+YRL++KS LP+A+KFE WV +VLP++RKTG++S + P
Sbjct: 84 GGGFMTIIPERDLYRLVMKSKLPAAEKFEEWVVGQVLPSIRKTGTFSTQGPNNSKIVGE- 142
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSDNDEYL-- 177
L + + + L K A +L K+ G+D L + P + +
Sbjct: 143 -LAILECFDRLLKPANSSKMMMLAKIAA----NNGLDAKFLPGYAVDAAPDAAGGSSMPT 197
Query: 178 -TITQIGERLNPPQRARFLNKLLLKRG---LQVSKVSGG-----YRPTPKGEERGGKMCD 228
IT + + AR N L G L K S + T KG G +
Sbjct: 198 KAITALIKDHAIASTARGFNLALKAHGFLTLLQRKNSKQEMVDFWSVTEKGMAYGKNL-T 256
Query: 229 VPMQHVE 235
P E
Sbjct: 257 SPQCPRE 263
>gi|294789953|ref|ZP_06755172.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
gi|294482110|gb|EFG29818.1| toxin-antitoxin system, toxin component, Bro family [Simonsiella
muelleri ATCC 29453]
Length = 283
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 12/158 (7%)
Query: 1 MST-ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYP 56
M+ I+ F+F E++ IRTI D+ WF+A DV LGY N +A++ HCK GVAKR
Sbjct: 12 MNNQISTFKFSENHSIRTIADEKGEFWFLANDVCGVLGYVNPRDAVSKHCKLKGVAKRDT 71
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
TE G Q++ I+EP++YRL++KS P A+ FE WV E+VLPT+RKTGSY
Sbjct: 72 -PTESGNQEMTYINEPNLYRLIIKSRKPEAEAFEEWVMEDVLPTIRKTGSYQTSGSLKTK 130
Query: 117 TSASTVLRVHKHLEELAK------QAGLKDNQLLLKVN 148
T+ L + + +E+ K Q K+ Q L +
Sbjct: 131 TALPNGLTLEQQ-DEIKKFHRELVQTAPKEKQAKLAIQ 167
>gi|170730310|ref|YP_001775743.1| hypothetical protein Xfasm12_1161 [Xylella fastidiosa M12]
gi|167965103|gb|ACA12113.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 193
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH-CKGVAKRYPLK 58
M+ I PF+F S+ +R ++ +D N WFVA DV TALGY N ++AI H L
Sbjct: 1 MTQSIIPFDFHSHAVRVVM-RDGNPWFVATDVCTALGYRNPSKAIADHLDDDERSNEQLD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
K IISE +Y L+++S P A+KF +WV EV+P++RKTG YS +
Sbjct: 60 RSRMGSKAVIISESGLYALILRSRKPEARKFAKWVTSEVMPSIRKTGGYSATGTVVNDDV 119
Query: 119 ASTVLRVHKHLEELAK 134
+ + + L +
Sbjct: 120 LYAIWFLCGQFKSLHE 135
>gi|315612382|ref|ZP_07887295.1| phage antirepressor protein [Streptococcus sanguinis ATCC 49296]
gi|315315363|gb|EFU63402.1| phage antirepressor protein [Streptococcus sanguinis ATCC 49296]
Length = 236
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ I F F ++RT+ D WFV KDVA LGY + AI H + + T
Sbjct: 1 MNEI--FNFHGQEVRTLT-IDGEPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 SGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 115
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 IALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 160
>gi|30995448|ref|NP_439568.2| hypothetical protein HI1418 [Haemophilus influenzae Rd KW20]
Length = 188
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 2 STIT--PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
+ I F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY
Sbjct: 3 NQIQFSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRYT- 61
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T+ Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 62 PTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALP 121
Query: 118 SASTVLRVHKHLEELAKQAGLK 139
EL + L
Sbjct: 122 EPEKKFSFEFTEYELQQLVWLW 143
>gi|148544033|ref|YP_001271403.1| prophage antirepressor [Lactobacillus reuteri DSM 20016]
gi|184153427|ref|YP_001841768.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|227364953|ref|ZP_03848995.1| prophage antirepressor [Lactobacillus reuteri MM2-3]
gi|325682425|ref|ZP_08161942.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|148531067|gb|ABQ83066.1| prophage antirepressor [Lactobacillus reuteri DSM 20016]
gi|183224771|dbj|BAG25288.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|227070007|gb|EEI08388.1| prophage antirepressor [Lactobacillus reuteri MM2-3]
gi|324978264|gb|EGC15214.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
Length = 257
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 31/272 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F F ++RT+ + +FV KDVAT LGY+ AI H + K L
Sbjct: 1 MQQL--FNFNGQQVRTVTINN-EPYFVGKDVATILGYKKPENAIANHVENEDKTTTLIQG 57
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
G K II+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y +A
Sbjct: 58 TGSNYKSKSVIINESGLYSLILSSKLPTAKEFKHWVTSEVLPAIRKHGAYMTPQTIEKAL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ T++ + L++ +Q QL + + K D + +
Sbjct: 118 LNPDTIINLATQLKKEQEQRK----QLQAENEQMKPKALFADAVSTS----------NSS 163
Query: 177 LTITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQH 233
+ I Q+ + L N+L + K G ++ S PT + E G +
Sbjct: 164 ILIGQLAKILRQNGVNIGQNRLFAWMRKNGYLGTRGSNRNVPTQRSMELG--LFKTKETV 221
Query: 234 VEGSTQQLKWNSNLLVS-----FLQNELINTP 260
+ S N V+ + N+ +N P
Sbjct: 222 INHSDGHTTVNITTKVTGKGQQYFINKFLNAP 253
>gi|1175791|sp|P44189|Y1418_HAEIN RecName: Full=Uncharacterized protein HI_1418
gi|1574254|gb|AAC23068.1| predicted coding region HI1418 [Haemophilus influenzae Rd KW20]
Length = 201
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 2 STIT--PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
+ I F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY
Sbjct: 16 NQIQFSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRYT- 74
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T+ Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 75 PTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALP 134
Query: 118 SASTVLRVHKHLEELAKQAGLK 139
EL + L
Sbjct: 135 EPEKKFSFEFTEYELQQLVWLW 156
>gi|315654962|ref|ZP_07907867.1| Bro family antirepressor [Mobiluncus curtisii ATCC 51333]
gi|315490923|gb|EFU80543.1| Bro family antirepressor [Mobiluncus curtisii ATCC 51333]
Length = 270
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 25/226 (11%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL- 57
ST+ F + +IRTI + I F AKD+ATALGYEN +A+ HC G KRYP+
Sbjct: 16 STLQVFTNSQFGQIRTITEHGVTI-FCAKDIATALGYENPTKAVRDHCRQDGGPKRYPII 74
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ G Q+ R I+E DVYRL+V S LP AQ+FERWVF+EVLP++R+TG Y+++
Sbjct: 75 DSLGRTQQARFITEGDVYRLIVSSHLPGAQRFERWVFDEVLPSIRRTGLYAIDELLENDE 134
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
L + K + K++ D + + +
Sbjct: 135 LLEQAL-------TRLRAERAKRLAAEQALLEAAPKLSYYDIV----------LQSPSLM 177
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
IT I + A+ LN+LL +Q + SG + + + G
Sbjct: 178 PITAIAKDYGL--SAKKLNRLLADEHIQFKQ-SGIWYLYAEYAKCG 220
>gi|38232815|ref|NP_938582.1| putative anti-repressor protein [Corynebacterium diphtheriae NCTC
13129]
gi|38199073|emb|CAE48694.1| Putative anti-repressor protein [Corynebacterium diphtheriae]
Length = 272
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 19/244 (7%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ PF F + +R +V ++ +V +DV L +NS +A++ T GG
Sbjct: 2 ELKPFNFRGHNVRVLVAENGEPLWVGRDVCAVLEIKNSRDALSRIDPEGVGIADTLTPGG 61
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAST 121
IQK+++++E +Y LL +S +P A++F RWV EVLP +R+ G Y+ A + +T
Sbjct: 62 IQKLKVVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHGMYATTATVEQMLADPTT 121
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLK-----------------VNRGVTKITGVDQLEAMD 164
+++ + +++ Q + Q + + R + KI + +E
Sbjct: 122 AIKLLEQIKQERDQRRALEVQAAIDKPKVMFADAVAEANTDILVRDLAKILRGNGIEVGG 181
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV-SGGYRPTPKGEERG 223
+ +YL + P Q+A L +K + TPK +G
Sbjct: 182 NRLFAWLRKHKYLMDGPSHIKHTPTQKAMELGLFKIKETVVTRSDGRSSITVTPKVTGKG 241
Query: 224 GKMC 227
+
Sbjct: 242 QRYF 245
>gi|293366199|ref|ZP_06612884.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319665|gb|EFE60026.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 238
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
MS + F FE +RT+ D+ FV KDVA LGY+ + +AI H + K ++T
Sbjct: 1 MSELQTFNFEELPVRTLTV-DKEPHFVGKDVARILGYKRTADAIRDHVELEDKGVGKIQT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG+Q V II+E +Y L+ S L SA++F+RWV EVLPTLRKTG+Y + P +
Sbjct: 60 PGGMQNVTIINESGLYSLIFSSKLESAKRFKRWVTSEVLPTLRKTGTYQI--PNDPMQAL 117
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + +E + A +K + + +K N+ +L+A + + + + I
Sbjct: 118 KLMFEATEQTKE--EIATVKADVIDIKENQ---------KLDAGEYGLITKTVHQRVAYI 166
Query: 180 TQIGERLNPPQRARFLNKLLLK 201
QI + + +NK L +
Sbjct: 167 RQI----HGLPNNKEVNKPLYR 184
>gi|269955332|ref|YP_003325121.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
gi|269304013|gb|ACZ29563.1| prophage antirepressor [Xylanimonas cellulosilytica DSM 15894]
Length = 259
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 17/222 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + F+F +R I D+ + WFVA DVA AL N + +++ + ++T G
Sbjct: 3 TDLQQFDFHGAGVRIITDEHGDPWFVAADVAAALSLGNIHSSLSLLDDDEKGLHTVETLG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q ++EP +Y L+++S P A+ F+RWV +VLP +RKTGSY V A A
Sbjct: 63 GAQTTSTVNEPGLYSLVLRSRKPEAKAFKRWVTHDVLPAIRKTGSYGVPALTGPELMARA 122
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
++ A +K L V R ++EA D D
Sbjct: 123 LIEAD---------ATIKAAHAELAVAR--------PKVEAFDAFLSTDGDYSVRDAAHV 165
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + L +L G +G R + + G
Sbjct: 166 LSRHHAILTGEKRLRDWMLTAGWLYRDPTGAPRAYQRRIDAG 207
>gi|262046894|ref|ZP_06019854.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
gi|260572876|gb|EEX29436.1| prophage antirepressor [Lactobacillus crispatus MV-3A-US]
Length = 267
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ +T F FE++++R +V D WFV KDVA LGY + A++ + K ++T
Sbjct: 1 MNQLTLFNFENSQLR-VVKIDGEPWFVGKDVAQILGYSQPSVAVSKNVPTKDKGITEMET 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR---- 115
GG QKV IISEP +Y+L+ KS +A++F +V EVLP +RK G+Y +
Sbjct: 60 PGGKQKVTIISEPGMYKLIFKSHASNAERFNDYVATEVLPAIRKHGAYMTDEKAFDVVHN 119
Query: 116 --------ATSASTVLRVHKHLEELAKQAGLKDN------QLLLKVNRGVTKITGVDQLE 161
+A + +EE+ +A D +L+ + K GV L+
Sbjct: 120 KDGLASLLQQAADQLREKDIQIEEMKPKALFADAVTSSKSTVLIGDLAKMIKQNGVHHLQ 179
Query: 162 ----------AMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS--- 207
+M +L + I + G N P QR+ L +K V
Sbjct: 180 IVENGTTKTLSMGPNNLFKWMRANHYLIARKGSDYNSPTQRSMLLGLFEIKEKTIVHSDG 239
Query: 208 --KVSGGYRPTPKGEER 222
+S + T KG++
Sbjct: 240 HTTISKTPKVTGKGQQY 256
>gi|254466455|ref|ZP_05079866.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
gi|206687363|gb|EDZ47845.1| BRO family, N-terminal domain protein [Rhodobacterales bacterium
Y4I]
Length = 252
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 29/243 (11%)
Query: 1 MSTI-------TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK 53
M+TI F+F + ++R +V +D + WFVAKDV ALG N + A+ + +
Sbjct: 1 MNTITKIIAETQSFDFNTKQVR-VVSRDGSPWFVAKDVCDALGIGNPSMAVASLEEDEVT 59
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ EG + +ISE +Y L+ +S A+ F +WV VLP +RKTGSY
Sbjct: 60 LSTI--EGSHRPTNLISESGLYALIFQSRKAEAKAFRKWVTSTVLPAIRKTGSYVSGEEH 117
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
L T+ + R+ + E A++ + LK + + + + + + +
Sbjct: 118 LDPTAPDYLDRLKDLMIE-AQERKIAAQAAELKKAQPLAAAFERNMMMTGGMGIQEYARS 176
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG---YRPTPKGEERGGKMCDVP 230
L P + A K L G K G Y P + + +GG V
Sbjct: 177 KG----------LGPNKFA----KWLQVEGFISKKERGAKTIYTPYAR-KNKGGLFETVK 221
Query: 231 MQH 233
QH
Sbjct: 222 HQH 224
>gi|258436119|ref|ZP_05689102.1| phage anti-repressor protein [Staphylococcus aureus A9299]
gi|258447678|ref|ZP_05695820.1| phage anti-repressor protein [Staphylococcus aureus A6300]
gi|257848808|gb|EEV72793.1| phage anti-repressor protein [Staphylococcus aureus A9299]
gi|257853525|gb|EEV76486.1| phage anti-repressor protein [Staphylococcus aureus A6300]
Length = 262
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE + T+ ++ + V +VA LGY N AIN H + K R ++
Sbjct: 1 MQALQTFNFEELPVNTLTIEN-EPYVVGNEVAKILGYSNYRNAINNHVEDEDKLRTQIRY 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G ++ V +I+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 AGQLRTVTLINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ V ++ +Q + L ++ K VD++
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI---------- 165
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDV 229
+ L TQI A+ LNKLL + LQ KV+ + + + + +
Sbjct: 166 LKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTI 222
Query: 230 PMQHVEGSTQ---QLKW 243
P+ +G Q +W
Sbjct: 223 PIVRSDGREDTVLQTRW 239
>gi|76809803|ref|YP_333048.1| BRO domain-containing protein [Burkholderia pseudomallei 1710b]
gi|76579256|gb|ABA48731.1| BRO family, N-terminal domain protein [Burkholderia pseudomallei
1710b]
Length = 239
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS +T F+FE +RT+ + + WFVAKDV LG N ++A+ A + L
Sbjct: 1 MSDLTLFKFEGRNLRTV-KINGDPWFVAKDVCDVLGITNPSDALTALDDDEKASFNLGLR 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G R++SE +Y L+++S P A+ F +WV VLP +RK GSY + K+
Sbjct: 60 GSAP--RVVSESGLYALIMRSRKPQARAFRKWVTSVVLPAIRKDGSYVMGEEKVATGEMD 117
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + A K +L ++ K+ + A +
Sbjct: 118 E----AELMARAMIAANNKIERLQTQIAANAPKVDFYETHTAPR----------GNMGFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGL-QVSKVSGGYRPTPKGEERGGKMCDVP 230
+ + L + R L L L ++ G R PK G VP
Sbjct: 164 EFAKTLGVYE--RDLRAFLSPEYLVKLRADGGSVRVAPKYRSFG-WFATVP 211
>gi|260580749|ref|ZP_05848575.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|260092566|gb|EEW76503.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 222
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 2 STIT--PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
+ I F F+ +R I+D WF DV LGY NS +A+ HCK GV KRY
Sbjct: 3 NQIQFSTFNFKDLPVRVILDPKGEFWFCGTDVCHILGYTNSRKALQDHCKQGGVTKRYT- 61
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T+ Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 62 PTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALP 121
Query: 118 SASTVLRVHKHLEELAKQAGLK 139
EL + L
Sbjct: 122 EPEKKFSFEFTEYELQQLVWLW 143
>gi|288573073|ref|ZP_06391430.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568814|gb|EFC90371.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 370
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S +T FEFE +R +V D N W+VAKDV L N EA+ + LK+ G
Sbjct: 112 SDVTLFEFERMVVR-VVFIDGNPWWVAKDVCDILSLGNVTEALRGLDEDELTSVILKSGG 170
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+++++I+EP +Y L+++S P A++F+RW+ E+LPT+RKTGSY++ + +
Sbjct: 171 QSREMKVINEPGLYSLILRSRKPEAKRFKRWLTHELLPTIRKTGSYALPGVD-PSKNGRK 229
Query: 122 VLRVHKHLEELAKQAGLKDNQLLL-----------KVNRGVTKITGVDQLEAMDIKHLPS 170
K L + + A + +++L K ++ V + + +D+ L
Sbjct: 230 EELAEKRLAIMERNANCRMAKMILKGMDAFKDVMTKESKTVFMAKYGELVTDVDLTRLLP 289
Query: 171 SDNDEYLTITQIGERLNPPQR 191
+ + T IG+ +
Sbjct: 290 RSAEPMYSATDIGKECGVSAQ 310
>gi|240081025|ref|ZP_04725568.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|268597136|ref|ZP_06131303.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268550924|gb|EEZ45943.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 283
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRF----NVESIEGIPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|293367985|ref|ZP_06614620.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291317882|gb|EFE58293.1| phage antirepressor protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 246
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLK 58
M+ + F FE +RT+ D +FV KDVA LGY +AI H R
Sbjct: 1 MNELQTFNFEELPVRTLSIDD-EPYFVGKDVADILGYSRGAKAIQDHIDKEDIRVVPIQD 59
Query: 59 TEGGIQKVRIISEPDVYRLLV--------KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G QK +I+E +Y L++ +S A+ F+RW+ EVLP++RKTGSY V
Sbjct: 60 RTGRYQKASLINESGLYTLVIDAARQSNNRSIKEKAKAFKRWITNEVLPSIRKTGSYQV- 118
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
P + + K +E + A +K + + L+ N+ +L+ D L
Sbjct: 119 -PSDPMDALQLMFDAQKQTKE--EIATVKSDVIDLRENQ---------KLDTGDYNLLSR 166
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ N I +I N QR+ + +V K++G T
Sbjct: 167 TINQRVAHIQKIHAITNQKQRSELFRDI----NSEVKKMTGATSRTN 209
>gi|291531549|emb|CBK97134.1| Prophage antirepressor [Eubacterium siraeum 70/3]
Length = 254
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 28/255 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
M+ + F + +IRTI D++ + F D+A ALGY N+ +A+ HCK GV +
Sbjct: 1 MNNLQIFNNAQFGEIRTI-DENGTVLFCGSDMAKALGYSNTKDALARHCKEDGVVFHDLI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRA 116
G Q + I+E +VYRL+ S LP+A++FE WVF+EVLPT+R+ G+Y + +
Sbjct: 60 DNMGREQHAKFINEGNVYRLITHSKLPAAEQFESWVFDEVLPTIRRNGAYMTDDTLEYAL 119
Query: 117 TSASTVLRVHKHLEE-----LAKQAGLKDNQLLLKVNRGVT------------KITGVDQ 159
TS ++++ L+E + +A ++ ++ + R V KI +
Sbjct: 120 TSPDFLIQLATKLKEEKAKRIELEAQVEQDKPKVLFARAVETAHTSILIGDLAKILKQNG 179
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRP--T 216
++ + D YL + G N P QRA + +K V+ G R T
Sbjct: 180 VQTGQKRLFEQLRQDGYL--IKGGNSHNMPTQRAMEMGLFEVKEST-VNNPDGSIRINRT 236
Query: 217 PKGEERGGKMCDVPM 231
K +G
Sbjct: 237 TKVTGKGQTYFINKY 251
>gi|240014407|ref|ZP_04721320.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
Length = 278
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY-- 176
A + + + L + G+ + +++ V+ +E + LP + +
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVESIEDLPAGKLPEAVAYVHAL 171
Query: 177 -LTITQIGERLNPPQRAR 193
L GE L+ P +A
Sbjct: 172 TLHTGLTGEVLDAPPKAE 189
>gi|59801452|ref|YP_208164.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|240016839|ref|ZP_04723379.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
gi|240120878|ref|ZP_04733840.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|240125457|ref|ZP_04738343.1| putative phage associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268684051|ref|ZP_06150913.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|59718347|gb|AAW89752.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
gi|268624335|gb|EEZ56735.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 281
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY-- 176
A + + + L + G+ + +++ V+ +E + LP + +
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVESIEDLPAGKLPEAVAYVHAL 171
Query: 177 -LTITQIGERLNPPQRAR 193
L GE L+ P +A
Sbjct: 172 TLHTGLTGEVLDAPPKAE 189
>gi|254493410|ref|ZP_05106581.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|226512450|gb|EEH61795.1| predicted protein [Neisseria gonorrhoeae 1291]
Length = 283
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRF----NVESIEDLPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|41189525|ref|NP_958629.1| 77ORF010 [Staphylococcus phage 77]
gi|40557226|gb|AAR87882.1| 77ORF010 [Staphylococcus phage 77]
Length = 265
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY SN AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARSNNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQ--------------------AGLKDNQLLLKVNRG 150
+ ++ V ++ +Q DN +L+
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQNLLLQQQVEVNKPKVLFADSVAGSDNSILVGELAK 179
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQ---- 205
+ K GVD + K L N+ YL I + GE N P Q++ L L +K+ +
Sbjct: 180 ILKQNGVDIGQNRLFKWL---RNNGYL-IKKSGESYNLPTQKSMDLKILDIKKRIINNPD 235
Query: 206 -VSKVSGGYRPTPKGEER 222
SKVS + T KG++
Sbjct: 236 GSSKVSRTPKVTGKGQQY 253
>gi|260440833|ref|ZP_05794649.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
gi|291044151|ref|ZP_06569867.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291012614|gb|EFE04603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 283
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRF----NVESIEDLPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|148986125|ref|ZP_01819111.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP3-BS71]
gi|149004088|ref|ZP_01828893.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP14-BS69]
gi|147757900|gb|EDK64909.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP14-BS69]
gi|147921839|gb|EDK72966.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP3-BS71]
gi|301799176|emb|CBW31689.1| unnamed protein product [Streptococcus pneumoniae OXC141]
Length = 236
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ I F F ++RT+ D WFV KDVA LGY + AI H + + T
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAITLHVDEEDALKQGIPT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 SGGTQDMLIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 115
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 IALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 160
>gi|296277289|ref|ZP_06859796.1| phage anti-repressor protein [Staphylococcus aureus subsp. aureus
MR1]
Length = 246
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 6 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 64
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y + +
Sbjct: 65 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQIPS 124
Query: 112 PKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 125 DPMQA------LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 169
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ N I ++ N QR+ + +V K++G T
Sbjct: 170 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 213
>gi|319775742|ref|YP_004138230.1| hypothetical protein HICON_10850 [Haemophilus influenzae F3047]
gi|317450333|emb|CBY86549.1| conserved hypothetical protein [Haemophilus influenzae F3047]
Length = 240
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 1 MS---TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
M+ + F F+ +R I D WF DV LGY NS +A+ HCK GV KRY
Sbjct: 43 MNTQIQFSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRY 102
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK-- 113
T+ Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +
Sbjct: 103 T-PTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLA 161
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
L + + K + ++ A + ++ + +L +
Sbjct: 162 LPMVNDDFKQAMAKMVTYASQYANFQQAITSAQLEEQKRLVEFFFSSIPNGDSYLFVFNK 221
Query: 174 DEYLTITQIGERLN 187
+ I Q + L+
Sbjct: 222 NIQQDIQQASDLLH 235
>gi|66396424|ref|YP_240782.1| ORF018 [Staphylococcus phage 92]
gi|62636838|gb|AAX91949.1| ORF018 [Staphylococcus phage 92]
Length = 245
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y V +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSEVLPTLRKTGAYQVPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ N I ++ N QR+ + +V K++G T
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 208
>gi|9635686|ref|NP_061599.1| antirepressor [Staphylococcus prophage phiPV83]
gi|8918756|dbj|BAA97816.1| antirepressor [Staphylococcus prophage phiPV83]
Length = 265
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV +VLP +RK G Y+ +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDN 119
Query: 112 PKLRA-TSASTVLRVHKHLEELAKQ--------------------AGLKDNQLLLKVNRG 150
+ ++ V ++ +Q DN +L+
Sbjct: 120 VIEQTLKDPDYIITVLTEYKKEKEQNLVLQQQVEVNKPKVLFADSVAGSDNSILVGELAK 179
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQ---- 205
+ K GVD + K L N+ YL I + GE N P Q++ L L +K+ +
Sbjct: 180 ILKQNGVDIGQNRLFKWL---RNNGYL-IKKSGESYNLPTQKSMDLKILDIKKRIINNPD 235
Query: 206 -VSKVSGGYRPTPKGEER 222
SKVS + T KG++
Sbjct: 236 GSSKVSRTPKVTGKGQQY 253
>gi|87303186|ref|ZP_01085984.1| hypothetical protein WH5701_06766 [Synechococcus sp. WH 5701]
gi|87282353|gb|EAQ74313.1| hypothetical protein WH5701_06766 [Synechococcus sp. WH 5701]
Length = 254
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 12/256 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + P+ FE ++IR D+ W V D AL A+ G + + G
Sbjct: 5 SALVPYLFEGHRIRVSTDQQGEAWIVVADACAALAESPMVWAVAIQRDGEHCLHSEEGPG 64
Query: 62 -GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE--APKLRATS 118
G + +I+E + R L+ S PSA + RW+ E+LP ++++ + A + A
Sbjct: 65 AGGFTLAMINEAALLRRLLNSDNPSAPRMRRWLTHELLPAIQRSQQRTAAQGARSIEAIR 124
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH-LPSSDNDEYL 177
T V + +E+ G+ + LL + +I +++ +L
Sbjct: 125 RQTAAEVLRGADEIIHLTGVSHAEALLSA---LEEIQANSSPAGAEVQQRFSHRAGVAWL 181
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
T Q+ ERL+ + N+ L GLQ ++ T G + G +P+
Sbjct: 182 TADQLAERLDRTLLS--TNQGLAAAGLQQRNEDDDWQLTEAGRDWG---VTLPLCSRGER 236
Query: 238 TQQLKWNSNLLVSFLQ 253
QQ+ W+ ++ Q
Sbjct: 237 RQQILWDPAVVALLHQ 252
>gi|319896720|ref|YP_004134913.1| hypothetical protein HIBPF03470 [Haemophilus influenzae F3031]
gi|317432222|emb|CBY80574.1| conserved hypothetical protein [Haemophilus influenzae F3031]
Length = 240
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Query: 1 MS---TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
M+ + F F+ +R I D WF DV LGY NS +A+ HCK GV KRY
Sbjct: 43 MNTQIQFSTFNFKDLPVRVISDPKGEFWFCGTDVCAILGYTNSRKALQDHCKQGGVTKRY 102
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK-- 113
T+ Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +
Sbjct: 103 T-PTKSADQEMTFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLA 161
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
L + + K + ++ A + ++ + + +L +
Sbjct: 162 LPMVNDDFKQAMAKMVTYASQYANFQQAITSAQLEKQKRLVEFFFSSIPNGDSYLFVFNK 221
Query: 174 DEYLTITQIGERLN 187
+ I Q + L+
Sbjct: 222 NIQQDIQQASDLLH 235
>gi|118579550|ref|YP_900800.1| BRO domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118502260|gb|ABK98742.1| BRO domain protein [Pelobacter propionicus DSM 2379]
Length = 247
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + F FE +RTI +++ WFV KDVA LGY AI CKG K L T G
Sbjct: 4 NQMQVFCFEDAAVRTI-ERNGEPWFVGKDVAEILGYAAPRNAIRDFCKGGIKSM-LPTGG 61
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G+Q++ II E D+YRL+++S LP+A++FE WV EVLP +RKTG Y++
Sbjct: 62 GLQEMTIIPERDLYRLIMRSKLPAAERFEEWVVAEVLPAIRKTGFYNI 109
>gi|213692400|ref|YP_002322986.1| phage antirepressor protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213523861|gb|ACJ52608.1| phage antirepressor protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320458542|dbj|BAJ69163.1| putative phage antirepressor [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 259
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 18/241 (7%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--RYPL 57
MS I F+F+ +RT+ D+ WFVAKDV LG ++N + R
Sbjct: 1 MSTEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGI-DTNHLGESLDSDEMNTLRITE 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
G IISEP +YRL+++S P A++F+RWV EVLP++R+ G+Y E+ +A
Sbjct: 60 GNTRGNPNKTIISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAV 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T ++R+ + KQ + + +V R K D +E L
Sbjct: 120 TEPDFLIRLATQI----KQERAEKEKAQAQVERMRPKALFADAVETSKTSIL-------V 168
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
+ ++ + L L G + S PT K E G + ++ V
Sbjct: 169 GDLAKVLKGNGVDIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELG--LFEIKETTVVH 226
Query: 237 S 237
S
Sbjct: 227 S 227
>gi|68250068|ref|YP_249180.1| hypothetical protein NTHI1733 [Haemophilus influenzae 86-028NP]
gi|68058267|gb|AAX88520.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
Length = 261
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
+ F F+++ +RTI D + IWF DV LGY N+ +A+ HCK G+AKRY +
Sbjct: 45 QFSIFNFKNSPVRTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRY-ISYP 103
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G ++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 104 SGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPE 163
Query: 121 TVLRVHKHLEELAKQAGLK 139
EL + L
Sbjct: 164 KKFSFEFTEYELQQLVWLW 182
>gi|240127893|ref|ZP_04740554.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268686287|ref|ZP_06153149.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268626571|gb|EEZ58971.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 283
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + +++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVSALAGRKGIDYSSAYSMIHQRF----NVESIEDLPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|240123213|ref|ZP_04736169.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|268681838|ref|ZP_06148700.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268622122|gb|EEZ54522.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 283
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + L + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVAALVGRKGIDYSSAYSMVHQRF----NVESVEGIPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|66395745|ref|YP_240116.1| ORF016 [Staphylococcus phage 37]
gi|62636168|gb|AAX91279.1| ORF016 [Staphylococcus phage 37]
Length = 257
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 30/253 (11%)
Query: 1 MSTITPFE---FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
M + F+ F +I TI D +F A VA LGY N +AI+ H K GV K
Sbjct: 1 MQNLKVFQNSQFGDLEILTI---DNKEYFPAIKVAEILGYTNPRDAISRHTKKRGVVKHD 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+ + G Q + I E ++YRL+ +S LP A++FE W+F+EVLP +RK G Y+ ++ +
Sbjct: 58 VIDSLGRKQVKKFIDEGNLYRLISRSKLPQAEQFEEWIFDEVLPAIRKHGIYATDSVIEQ 117
Query: 116 A-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ ++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 TIQNPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKST 163
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQH 233
L TQI A+ LNKLL + LQ KV+ + + + + +P+
Sbjct: 164 GTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIPIVR 220
Query: 234 VEGSTQ---QLKW 243
+G Q +W
Sbjct: 221 SDGREDTVLQTRW 233
>gi|240117658|ref|ZP_04731720.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|268603359|ref|ZP_06137526.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268587490|gb|EEZ52166.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
Length = 283
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + L + G+ + +++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVESIEDLPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|32469446|ref|NP_862854.1| gp15 [Streptococcus phage SM1]
gi|32441598|gb|AAP81897.1| gp15 [Streptococcus phage SM1]
Length = 239
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ I F F ++RT+ D WFV KDVA LGY + AI H + + T
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 SGGTQDMLIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 115
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 IALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 160
>gi|240112608|ref|ZP_04727098.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|268598677|ref|ZP_06132844.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268582808|gb|EEZ47484.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 283
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TTSGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + +++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVSALAGRKGIDYSSAYSMIHQRF----NVESVEGIPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|184153732|ref|YP_001842073.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
gi|183225076|dbj|BAG25593.1| putative phage antirepressor [Lactobacillus reuteri JCM 1112]
Length = 257
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 27/270 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ F F ++RT+ D +F+ +D+ L Y N +AI H K +
Sbjct: 1 MNEPQLFNFHGQQVRTMTLND-EPYFIGRDLTAILQYSNGPKAIRDHVDADDKLTERIVL 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G ++V +I+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y +A +
Sbjct: 60 AGQHREVTLINESGLYSLILGSKLPTAKEFKHWVTSEVLPAIRKHGAYMTPQTIEKALLN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + L+ +Q QL + + K D + + +
Sbjct: 120 PDTIINLATQLKREQEQRK----QLQAENEQMKPKALFADAVSTS----------NSSIL 165
Query: 179 ITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
I Q+ + L N+L + K G ++ S PT + E G + +
Sbjct: 166 IGQLAKILRQNGVNIGQNRLFAWMRKNGYLGTRGSNRNVPTQRSMELG--LFKTKETVIN 223
Query: 236 GSTQQLKWNSNLLVS-----FLQNELINTP 260
S N V+ + N+ +N P
Sbjct: 224 HSDGHTTVNITTKVTGKGQQYFINKFLNAP 253
>gi|226940587|ref|YP_002795661.1| bacteriophage antirepressor [Laribacter hongkongensis HLHK9]
gi|226715514|gb|ACO74652.1| Possible bacteriophage antirepressor [Laribacter hongkongensis
HLHK9]
Length = 201
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 4/167 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKT 59
S F F+++ +RT D +WF A DV LGY N+ +AI HC KGVAKR L T
Sbjct: 9 SAPAVFSFDAHVVRTHADATGELWFCATDVCDVLGYRNARDAITKHCREKGVAKRDTL-T 67
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+GG Q++ ISEP++YRL+VKS P A++FE WV E+VLP +RKTGSY+ AP S
Sbjct: 68 DGGKQELVFISEPNLYRLIVKSRKPEAERFETWVMEDVLPAIRKTGSYAAPAPSPAPKSI 127
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
S L+ L + D LL + +D EA I+
Sbjct: 128 SADLKARFDL-TRKRFIAQYDMNGLLSMKEIPEGWELIDMAEARRIR 173
>gi|229176557|ref|ZP_04303983.1| Antirepressor, phage associated [Bacillus cereus MM3]
gi|228606913|gb|EEK64309.1| Antirepressor, phage associated [Bacillus cereus MM3]
Length = 256
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 22/243 (9%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ + F E ++RT++ + +++WFVAKDVA LGY N+++AI H K P+
Sbjct: 1 MNQLQVFNNEEFGQVRTVI-QGEDVWFVAKDVAEVLGYNNTSKAIQMHVDEDEKADLPIW 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
+ ++I+E +Y L++ S LPSA+KF++WV EVLP++RK G+Y + +A T
Sbjct: 60 DGRQNRNQKVINESGLYSLILSSKLPSAKKFKKWVTSEVLPSIRKHGAYMTDQVLEQAVT 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIKHLPSSDN- 173
+ + + L+E ++ Q++ + V + + L+ ++ L + N
Sbjct: 120 NPDFAIGLLTKLKEEKEKLAAAQQQIVQQQRLVTFAKACMQSNESLKVSEVAKLAAKHNI 179
Query: 174 --DEYLTITQIGE-------RLNPPQRARFLNKLLLKRGLQVSKVSG-----GYRPTPKG 219
+ T++ E P Q A + +G++ TPKG
Sbjct: 180 KIGQRQLFTKLREWNLIFKRSTEPTQSAVEKGYFEIAQGVKQKPSGEPFTWTTTYVTPKG 239
Query: 220 EER 222
+
Sbjct: 240 QAY 242
>gi|154486258|ref|ZP_02027665.1| hypothetical protein BIFADO_00061 [Bifidobacterium adolescentis
L2-32]
gi|154084121|gb|EDN83166.1| hypothetical protein BIFADO_00061 [Bifidobacterium adolescentis
L2-32]
Length = 263
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 22/240 (9%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-ENS-NEAINAHCKGVAKRYPL 57
M+ I F+F+ +R + + WFVAKD LG N EA++ + +
Sbjct: 1 MNTEIQRFDFKGESLRALTNMAGEPWFVAKDACDILGIDTNHLREALDDDEITNLRNSEV 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ G + IISEP +Y+L+++S P A++F+RWV EVLP++RK G+Y + +A
Sbjct: 61 WNQPGRAPL-IISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQQTLDKAL 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
TS ++++ L+E +Q +K+ + K T + D L D L S+D++
Sbjct: 120 TSPDFLIQLATKLKE--EQEKVKELEPKAKALDDFTNVP--DALLVRDAAKLLSNDSN-- 173
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
QIGE L + L+ G + + + +G + H
Sbjct: 174 ---IQIGE--------HELRQWLVDNGWIYRQSNQSWCAASSRVRQGHMVMVSSRSHGIH 222
>gi|196251077|ref|ZP_03149758.1| prophage antirepressor [Geobacillus sp. G11MC16]
gi|196209449|gb|EDY04227.1| prophage antirepressor [Geobacillus sp. G11MC16]
Length = 241
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ F + ++RTI+ K+ +WF+AKDV + L +NS +A+ + T
Sbjct: 1 MN-PQVFTYGETQVRTII-KNGEVWFIAKDVCSVLDIKNSRDALGRLDEDEKGVVLTDTL 58
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q++ ++E +Y L+++S P A++F+RWV EVLPT+RKTG Y ++
Sbjct: 59 GGKQQMLCVNEAGLYNLVLRSRKPEAKQFKRWVTHEVLPTIRKTGGYV----------SN 108
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ ++ +L +Q + +L V R +I ++ D +
Sbjct: 109 DEMFINTYLPFADEQTKMMFRGVLETVRRQNERIA---AMKPKADYFDALVDRNLLTNFR 165
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L +R + LL G +P +
Sbjct: 166 DTAKELEVKERYFI--EWLLDNKFVYRDQKGKLKPYAQY 202
>gi|315655979|ref|ZP_07908877.1| phage antirepressor protein [Mobiluncus curtisii ATCC 51333]
gi|315490043|gb|EFU79670.1| phage antirepressor protein [Mobiluncus curtisii ATCC 51333]
Length = 266
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 115/258 (44%), Gaps = 33/258 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPL-K 58
IT F F+ ++RT+ D + F KDVAT LGYEN +A+ HCK KRYP+
Sbjct: 4 QDITRFVFDGQELRTLTV-DGDTLFCGKDVATILGYENPTKAVRDHCKKDGGLKRYPIQD 62
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRAT 117
+ G Q+ I+EPD+YRL+ S LP+A+KF+RWVFE+VLPT+RKTG Y+ EA +
Sbjct: 63 SLGRTQEAAFITEPDLYRLITHSKLPTAEKFDRWVFEDVLPTIRKTGMYATPEAARRFLQ 122
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA--------------- 162
++ + L+E + + KV + K+ D +
Sbjct: 123 DPQALMYTLQALQEEKNKTKALEQ----KVEQDAPKVLFADAVATSKNSILIGDLAKILR 178
Query: 163 -----MDIKHLPSSDNDEYLTITQIGERLNPP-QRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ L DE G+R N P Q A +K+ ++ G R T
Sbjct: 179 SNGIQIGQNRLFEWLRDENYLCKTRGDRWNMPRQSAMEQGLFEVKQ-TVINNPDGTVRVT 237
Query: 217 P--KGEERGGKMCDVPMQ 232
K +G +
Sbjct: 238 KTTKVTGKGQQYFVNKFC 255
>gi|12697190|emb|CAC28354.1| putative antirepressor [Neisseria gonorrhoeae]
Length = 128
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ I F F ++RT+ D WFV KDVA LGY + AI H + + T
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEEDALKQGIPT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q + II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 SGGTQDMLIINESGLYSLILSSKLPQAREFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 115
Query: 120 STVLRVHKHLEE 131
+ K L E
Sbjct: 116 IALFTGQKKLRE 127
>gi|270635191|ref|ZP_06222052.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317460|gb|EFA28953.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 163
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 1 MST---ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
MS F F+S+++R I D +Q WF DV LGY+N+ +A+ HCK G+AKRY
Sbjct: 1 MSNQVQFNAFNFKSSQVRVITDPNQEFWFCGSDVCYILGYKNAPDALAKHCKQGGIAKRY 60
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
T+ G Q++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 61 T-PTQSGEQEMIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLA 119
Query: 116 ATSAST 121
Sbjct: 120 LPEPEK 125
>gi|317056068|ref|YP_004104535.1| prophage antirepressor [Ruminococcus albus 7]
gi|315448337|gb|ADU21901.1| prophage antirepressor [Ruminococcus albus 7]
Length = 256
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 21/250 (8%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLK 58
M+ I F E +RT+ + W V KD+A LGY N ++AI H K
Sbjct: 1 MNDIMTFVNEDFGSVRTV-SINGEPWLVGKDIALMLGYSNPHKAIRDHVDDEDKGVNESV 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q+ +I+E Y L++ S LPSA+K +RWV E+LPT+RKTG Y +A K T
Sbjct: 60 TPGGRQRTIVINESGFYCLVLSSKLPSAKKIKRWVTSEILPTIRKTGGYVNDADKFVNTY 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + +EL K QL ++ R K+ D + ++D +
Sbjct: 120 ---LPFADEPTKELFKIQFEYIGQLNERIRRDEPKVRFADHVS-------ETADLIDMNE 169
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSK--------VSGGYRPTPKGEERGGKMCDVP 230
+ +I L + L +G+ + G +R RGG++
Sbjct: 170 MAKICADHGIRIGRTRLFRWLRSKGILMDGNLPYQEYIERGYFRVKESVFNRGGELKIYR 229
Query: 231 MQHVEGSTQQ 240
++ G QQ
Sbjct: 230 QTYLTGKGQQ 239
>gi|240115355|ref|ZP_04729417.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|268601036|ref|ZP_06135203.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585167|gb|EEZ49843.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 283
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG V T+
Sbjct: 60 TASDEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPK----TT 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A + + + LA + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 ADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRF----NVESIEDLPAGKLPEAV--AYVH 169
Query: 179 ITQIGERLNPPQRARF 194
+ L R
Sbjct: 170 ALTLHTGLTGEVLDRE 185
>gi|50955842|ref|YP_063130.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952324|gb|AAT90025.1| prophage antirepressor protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 260
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 15/225 (6%)
Query: 1 MST--ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
MS+ I PF FE +RT++ D WF+ +DV + LG N EA+ + + L
Sbjct: 1 MSSTEIIPFTFEEVNVRTVLV-DGEPWFILRDVLSVLGLSNPTEAVRSLDEDEFSTTELS 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+G + +++EP +Y L+++S A+ F+RWV EVLP +R+TGSYSV P
Sbjct: 60 LDGQRRNYYLVNEPGLYSLILRSRKTEARAFKRWVTHEVLPQIRRTGSYSV-VPADDVAL 118
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + L K + QL+++ V + D + + +
Sbjct: 119 PQNYVEALEALLVREK----ANQQLIVENAGLVPRAGAWDAIA-------SAVGDYSVGD 167
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+I R P + L L G +R + E+G
Sbjct: 168 AAKILSRAGIPTGPQRLFAQLEGIRWVYRGGDGKWRAYAERVEKG 212
>gi|307244380|ref|ZP_07526491.1| BRO family, N-terminal domain protein [Peptostreptococcus stomatis
DSM 17678]
gi|306492199|gb|EFM64241.1| BRO family, N-terminal domain protein [Peptostreptococcus stomatis
DSM 17678]
Length = 243
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 28/223 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH----CKGVAKRYP 56
MS++ FE T+++KD +F+ K+VA LGY N+ +A+ H KGV K
Sbjct: 1 MSSLITFENMEFGKLTVMEKDGEFFFIGKEVAEKLGYSNTRDALVRHIAEEDKGVVKH-- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T GG Q II+E +Y L++ S LP A+ F+RWV EVLP++RK G Y
Sbjct: 59 -DTLGGRQSFTIINESGLYSLILSSKLPQAKDFKRWVTTEVLPSIRKNGGYI-------- 109
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+E + N +LL + K ++ LE +N+
Sbjct: 110 -----------KNQEKMSNEEILANAVLLANHLIAEKEKIIEDLEPKAKYFDELVNNNLL 158
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L+ PQ + + LL++ L P K
Sbjct: 159 TNFRNTAKELHIPQ--KVFIQFLLEKELIYRDKKNRLLPYAKN 199
>gi|310286594|ref|YP_003937852.1| phage anti-repressor protein [Bifidobacterium bifidum S17]
gi|309250530|gb|ADO52278.1| putative phage anti-repressor protein [Bifidobacterium bifidum S17]
Length = 260
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + PF+F+ N++R + DK WFVAKDV LGY+N+++AI H K
Sbjct: 4 NNLQPFDFKGNQVRILTDKKGEPWFVAKDVCNVLGYQNASKAITDHVDAGDKLNNESLSS 63
Query: 62 -GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS-VEAPKLRATSA 119
G + +I+E +Y L++ S L A++F +WV EVLP +R+TG Y V+A T
Sbjct: 64 LGQRGGWVINESGLYCLILSSKLERAREFRKWVTSEVLPQIRRTGGYIHVDAGDDEKTIL 123
Query: 120 STVLR-----VHKHLEELAKQA-GLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ L +++ E + +QA L++ + L + G + KH + D
Sbjct: 124 ARALEITQRTLNRQGETIRRQALELEEWRPLALLGEAFVSTDGTMSVTDA-AKHFRTLDQ 182
Query: 174 DEYLTI---------TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY--RPTPKGEER 222
+ P +A ++ ++G++ + G R T KG
Sbjct: 183 RMSRDMVYGLLRGAGYVEARSNAPTVKAIRPGYMVARQGMRDGRKIGKPYARFTAKGASW 242
>gi|297583087|ref|YP_003698867.1| prophage antirepressor [Bacillus selenitireducens MLS10]
gi|297141544|gb|ADH98301.1| prophage antirepressor [Bacillus selenitireducens MLS10]
Length = 281
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 29/238 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F FE + +RT+ K W+VAKDV G N N A+ + T
Sbjct: 1 MNELKLFHFEGHAVRTLQ-KAGETWWVAKDVCEVFGETNRNRAMRNLDADEKGYTQMTTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSA---------------QKFERWVFEEVLPTLRKTG 105
G Q+V I++EP +Y LL A + F+RWV +VLP +R+ G
Sbjct: 60 RGPQEVAIVNEPGLYSLLFTMRPKKARGLTAEEVTDRENRLKAFKRWVTHDVLPMIRQHG 119
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
Y+ E L K ++ ++ + ++ K + D +
Sbjct: 120 LYATEELLQNPDFLIKTLEALKETRAYNQRLEEENRIQIQQIAELQPKASYYDVVLTCKD 179
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ I+ I + + ++LN+ L +RG+Q + S + + G
Sbjct: 180 A----------VAISTIAKDYG--KSGKWLNRYLHERGVQFRQGS-TWLLYQRYASLG 224
>gi|212694217|ref|ZP_03302345.1| hypothetical protein BACDOR_03743 [Bacteroides dorei DSM 17855]
gi|224026255|ref|ZP_03644621.1| hypothetical protein BACCOPRO_03011 [Bacteroides coprophilus DSM
18228]
gi|253572710|ref|ZP_04850110.1| prophage antirepressor [Bacteroides sp. 1_1_6]
gi|254882533|ref|ZP_05255243.1| prophage antirepressor [Bacteroides sp. 4_3_47FAA]
gi|317480911|ref|ZP_07939992.1| phage antirepressor protein KilAC domain-containing protein
[Bacteroides sp. 4_1_36]
gi|329965191|ref|ZP_08302122.1| BRO family protein [Bacteroides fluxus YIT 12057]
gi|212663204|gb|EEB23778.1| hypothetical protein BACDOR_03743 [Bacteroides dorei DSM 17855]
gi|224019491|gb|EEF77489.1| hypothetical protein BACCOPRO_03011 [Bacteroides coprophilus DSM
18228]
gi|251837610|gb|EES65701.1| prophage antirepressor [Bacteroides sp. 1_1_6]
gi|254835326|gb|EET15635.1| prophage antirepressor [Bacteroides sp. 4_3_47FAA]
gi|316902996|gb|EFV24869.1| phage antirepressor protein KilAC domain-containing protein
[Bacteroides sp. 4_1_36]
gi|328523554|gb|EGF50651.1| BRO family protein [Bacteroides fluxus YIT 12057]
Length = 276
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 15/233 (6%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ I F E +RT + F DVA LG + +++ + V +YP+
Sbjct: 1 MNDIQIFNNEEFGAVRTTGTP-EQPLFCLADVARVLGLK-TSKLVQRLSDDVLSKYPISD 58
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ G Q I+E +Y +++ S P A++F +WV EVLP++RK G+Y + +A +
Sbjct: 59 SLGREQVTNFINEDGLYDVILDSRKPEAKRFRKWVTSEVLPSIRKHGAYMTQQTIEKALA 118
Query: 119 -ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK-------HLPS 170
++R+ +L+E ++ L + + + R V + VD L+ +
Sbjct: 119 EPDFLIRLAVNLKEERQKRLLVEQECEHQRTRIVELGSKVDDLQQEVTEMKDKVSYLDII 178
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ +TQI + + + N+ L + +Q + + ++ G
Sbjct: 179 LATKSSVLVTQIAQDYG--ESSIRFNRRLKEMNIQYQR-GKQWILYADYKDCG 228
>gi|184157378|ref|YP_001845717.1| prophage antirepressor [Acinetobacter baumannii ACICU]
gi|183208972|gb|ACC56370.1| Prophage antirepressor [Acinetobacter baumannii ACICU]
Length = 250
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 15/244 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I+ F F N+IRT++ D IWFVA DVAT L Y ++ I + + T
Sbjct: 1 MSNISVFNFNQNEIRTVLKDDGEIWFVASDVATVLEYSVASAMIRHLDEDEKGVSIVHTL 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLRA 116
GG Q+V IISE +Y +KS P A++F++W+ +VLP++RK G Y + P+L
Sbjct: 61 GGEQEVSIISESGLYSATLKSRKPEAKQFKKWITSDVLPSIRKNGGYIAGQENDDPELIL 120
Query: 117 TSASTVLR--VHKHLEELAKQAGLKDNQLLLKV---NRGVTKITGVDQLEAMDIKHLPSS 171
A V + + +EL + +D + K ++ +++ + L
Sbjct: 121 AKALQVANNVILRKTQELQQARIERDFAIETKAHISDKKTATAMATASVKSRQAEKLKEQ 180
Query: 172 DNDE--YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS----GGYRPTPKGEERGGK 225
+ Y ++ + + R L K L G ++ ++ G + K +
Sbjct: 181 IGESKNYASVKAVEKVAGGKYNWRELKKWCLAHGKKIKDIADANYGSVKIYHKDAWKAVY 240
Query: 226 MCDV 229
++
Sbjct: 241 GINL 244
>gi|227500518|ref|ZP_03930574.1| phage antirepressor protein [Anaerococcus tetradius ATCC 35098]
gi|227217369|gb|EEI82697.1| phage antirepressor protein [Anaerococcus tetradius ATCC 35098]
Length = 244
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +AI H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAIYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V K
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEK------- 115
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
K EEL A L N+++ + + + L + D +
Sbjct: 116 ------KTNEELLADAILVANRIIAEREEEIVE------LRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|220920614|ref|YP_002495915.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
gi|219945220|gb|ACL55612.1| prophage antirepressor [Methylobacterium nodulans ORS 2060]
Length = 295
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+FES +R+ ++D +WFVA DV ALG NS A+ A + T
Sbjct: 1 MNALQTFDFESQAVRS-FERDGQVWFVAADVCRALGLTNSRMALQALDDDEKGVSSIYTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
GG Q++ IISEP +Y ++++ P + +F +WV EVLP LRKTG YS+ A +
Sbjct: 60 GGRQEMAIISEPGLYTIILRCREATKPGSLPHRFRKWVTGEVLPALRKTGRYSMRAGEGE 119
Query: 116 AT--SASTVLRVHKHLEELAKQAGLKDNQLLLK 146
A+ + + + + E G + + L +
Sbjct: 120 ASTFDYERIGAMARLVSEARHVYGREAARALWE 152
>gi|309805014|ref|ZP_07699071.1| phage antirepressor protein [Lactobacillus iners LactinV 09V1-c]
gi|308165673|gb|EFO67899.1| phage antirepressor protein [Lactobacillus iners LactinV 09V1-c]
Length = 265
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 91/253 (35%), Gaps = 28/253 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTE 60
+ I F FE+N+IRT D +F D L +N+ A + GV +
Sbjct: 5 NEIQIFNFENNEIRT-KIIDNEPYFNLTDACKILEIQNTRNAKARLNEDGVRTMDTIDRL 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y + T
Sbjct: 64 GRTQQANFISEPNLYKLIFQSRKPEAEKFADWVTSEVLPAIVHKGVYMTDKKAYDITHDR 123
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA------------------ 162
T + L++ A Q KD Q+ K D +
Sbjct: 124 TGATLADLLQQAADQLKQKDIQI----AEMKPKALFADAVATSNRSILVGELAKLIRQNG 179
Query: 163 --MDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSGGYRPTPK 218
+ L + I + G N P Q+A + +K + S + T K
Sbjct: 180 VDIGQNRLFIWLREHGYLIKRKGTDYNMPTQKAVAMGIFQIKETSITHSNGTVTLTKTAK 239
Query: 219 GEERGGKMCDVPM 231
+G +
Sbjct: 240 VTGKGQQYFINKF 252
>gi|256821181|ref|YP_003142380.1| prophage antirepressor [Anaerococcus prevotii DSM 20548]
gi|256799161|gb|ACV29815.1| prophage antirepressor [Anaerococcus prevotii DSM 20548]
Length = 244
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V K
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEK------- 115
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
K EEL A L N+++ + + + L + D +
Sbjct: 116 ------KTNEELLADAILVANRIIAEREEEIVE------LRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|325912758|ref|ZP_08175137.1| phage antirepressor protein [Lactobacillus iners UPII 60-B]
gi|325477889|gb|EGC81022.1| phage antirepressor protein [Lactobacillus iners UPII 60-B]
Length = 265
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 92/253 (36%), Gaps = 28/253 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTE 60
+ I F FE+N+IRT D +F D L +N+ A + GV +
Sbjct: 5 NEIQIFNFENNEIRT-KIIDNEPYFNLTDACKILEIQNTRNAKARLNEDGVRTMDTIDRL 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y + T
Sbjct: 64 GRTQQANFISEPNLYKLIFQSRKPEAEKFADWVTSEVLPAIVHKGVYMTDKKAYDITHDR 123
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA------------------ 162
+ + L++ A Q KD Q+ K D +
Sbjct: 124 SGATLADLLQQAADQLKQKDIQI----AEMKPKALFADAVATSNRSILVGELAKLIRQNG 179
Query: 163 --MDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSGGYRPTPK 218
+ L + + I + G N P Q+A + +K + S + T K
Sbjct: 180 VDIGQNRLFTWLREHGYLIKRKGTDYNMPTQKAVAMGIFQIKETSITHSNGTVTLTKTAK 239
Query: 219 GEERGGKMCDVPM 231
+G +
Sbjct: 240 VTGKGQQYFINKF 252
>gi|258541362|ref|YP_003186795.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01]
gi|256632440|dbj|BAH98415.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01]
gi|256635497|dbj|BAI01466.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-03]
gi|256638552|dbj|BAI04514.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-07]
gi|256641606|dbj|BAI07561.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-22]
gi|256644661|dbj|BAI10609.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-26]
gi|256647716|dbj|BAI13657.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-32]
gi|256650769|dbj|BAI16703.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653760|dbj|BAI19687.1| phage associated-antirepressor BRO [Acetobacter pasteurianus IFO
3283-12]
Length = 247
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 22/236 (9%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + PF FE ++R ++D+ ++V DV L + A N R + T
Sbjct: 1 MTENLIPFSFEGTEVR-VLDRKGTPFWVHADVCAVLEIAQPHHAANRLDDDEKGRAIVTT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS- 118
GG Q++ +I+E ++ L++ S P+A++F++W+ EV+P++RKTG Y V AP
Sbjct: 60 LGGPQEMTVINESGLWSLVLTSRKPAAKRFKKWITSEVIPSIRKTGGYMVAAPDETPEEL 119
Query: 119 --------ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+TV R L +A D + +T+ V Q+ D+
Sbjct: 120 ALRAMTILQATVERQKTQLAVAQPKAEAHDRIAGADGSLSITEAAKVLQVRPKDL--FDW 177
Query: 171 SDNDEYL-----TITQIGERLNPPQRARF--LNKLLLKRGLQVSKVSGGYRPTPKG 219
++ ++ + + +G + + R + +L G + KVS R TPKG
Sbjct: 178 LSHNGWIYKRPGSPSWLGYQSHTTNRDLEHKITTILRPDGSE--KVSEQVRITPKG 231
>gi|169346810|ref|ZP_02865761.1| phage antirepressor protein [Clostridium perfringens C str.
JGS1495]
gi|169297092|gb|EDS79214.1| phage antirepressor protein [Clostridium perfringens C str.
JGS1495]
Length = 256
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 35/260 (13%)
Query: 1 MST-ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---Y 55
M+ + F E +IRT+ ++ W V KD+ LGY NS++A+ H K+ +
Sbjct: 1 MNNQLQIFNNQEFGQIRTLFIEN-EGWLVGKDITDILGYSNSSDALKNHVDEDDKKKIAF 59
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+ G + +I+E +Y L+++S LP A+KF+RWV EVLP++R G+Y E +
Sbjct: 60 SDYPQFGNKGAVLINESGLYSLILRSNLPKAKKFKRWVTSEVLPSIRNYGAYMTENTLEK 119
Query: 116 A-TSASTVLRVHKHLEELAKQAGLKDNQ--------------------LLLKVNRGVTKI 154
A TS ++++ +L+E ++ L + + +L+ + K
Sbjct: 120 ALTSPDFLIQLATNLKEEQEKRRLLEEEKERNAPKVIFADAVSTSHTSILVGELAKLMKQ 179
Query: 155 TGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGY 213
G+D E K L D I + G N P Q++ L + +K ++ G
Sbjct: 180 NGIDTGEKRLFKWL----RDNGYLIKRKGTDYNMPTQKSLELKIIEIKERT-INNPDGSI 234
Query: 214 R--PTPKGEERGGKMCDVPM 231
R TPK +G +
Sbjct: 235 RITKTPKITGKGQQYFINKF 254
>gi|66396285|ref|YP_240644.1| ORF018 [Staphylococcus phage 52A]
gi|62636701|gb|AAX91812.1| ORF018 [Staphylococcus phage 52A]
gi|116235520|gb|ABJ88855.1| putative antirepressor [Staphylococcus phage 80]
Length = 241
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +R I + + +F+ KDVA LGY ++ AI H + + +
Sbjct: 1 MQELQTFNFEELPVRKI-EVEGEPFFLGKDVAEILGYARADNAIRNHVDSEDRLMHQISA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y + +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQIPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEQTKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ N I ++ N QR+ + +V K++G T
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 208
>gi|322376768|ref|ZP_08051261.1| toxin-antitoxin system, toxin component, Bro family [Streptococcus
sp. M334]
gi|321282575|gb|EFX59582.1| toxin-antitoxin system, toxin component, Bro family [Streptococcus
sp. M334]
Length = 329
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY + AI H K+
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEDDALKQGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRVQETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 FIALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 161
>gi|260889381|ref|ZP_05900644.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
gi|260860792|gb|EEX75292.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
Length = 257
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 19/250 (7%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ +T FE E K+R + + ++ +F DV LG +N + + T
Sbjct: 3 NELTVFENEKFGKVRVVTE-NEKPYFNLNDVCEILGLKNPRQVKSRLNPKGVILVDTLTS 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT--- 117
GG Q++ I+E ++Y+ + +S P A+ WV EVLPT+RKTG Y +
Sbjct: 62 GGKQQMNFINESNLYKCIFQSDKPEAEAITEWVTGEVLPTIRKTGMYVTDELLNNPDLAI 121
Query: 118 --------SASTVLRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIK 166
+R+ K +EE A ++ + K + R ++KI + ++ + +
Sbjct: 122 KAFTRLKEEQEKRMRLEKEIEEQAPAVAFANSLTVSKDCILVRELSKILKQNGIDVGETR 181
Query: 167 HLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGG-YRPTPKGEERGG 224
+ YL I+++G N P Q++ L ++K G ++S G TPK +G
Sbjct: 182 LFEWLRQNGYL-ISKVGSDWNLPTQKSMNLGLFVIKEGTRMSTTEGSKITKTPKVTGKGQ 240
Query: 225 KMCDVPMQHV 234
+
Sbjct: 241 QYFLNKFLKN 250
>gi|228961476|ref|ZP_04123087.1| Phage antirepressor protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228798190|gb|EEM45192.1| Phage antirepressor protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 256
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F + ++RT+V + ++ WFVAKDV L +N+ +A+ + + +
Sbjct: 3 MNQLQVFNNKELGQVRTVV-QGEDAWFVAKDVCEVLDIKNTTQAVQKLDEDEVTMFNIGG 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G II+E +Y L++ S P A+ F++WV EV+P++RK G+Y + +A T+
Sbjct: 62 LSG--NTNIINESGLYSLIMTSRKPQAKAFKKWVTSEVIPSIRKYGAYMTDQVLEQAVTN 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD----IKHLPSSDND 174
+ + L+E ++ Q+L + +T + ++ +K L +
Sbjct: 120 PDFAIGLLTRLKEEKEKLAAAQRQIL----QQQPLVTFAEAVQVSTNLISVKQLANLMRQ 175
Query: 175 EYLTITQ 181
+ + Q
Sbjct: 176 KGINTGQ 182
>gi|229148259|ref|ZP_04276562.1| Antirepressor, phage associated [Bacillus cereus BDRD-ST24]
gi|228635271|gb|EEK91798.1| Antirepressor, phage associated [Bacillus cereus BDRD-ST24]
Length = 256
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ + F E ++RT+V K +++WFVAKDV L N+ +++ + +
Sbjct: 1 MNQLQVFNNEEFGQVRTVV-KGEDVWFVAKDVCDVLEIVNATRSLSRLDEDELHSMKVAD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
+ G Q II+E +Y L++ S P A+ F++WV EVLP++RK G+Y + +A T
Sbjct: 60 SLGRPQDTNIINESGLYSLIMTSRKPQAKAFKKWVTSEVLPSIRKHGAYMTDQVLEQAVT 119
Query: 118 SASTVLRVHKHLEELAKQ 135
+ + + L+E ++
Sbjct: 120 NPDFAIGLLTKLKEEKEK 137
>gi|212695600|ref|ZP_03303728.1| hypothetical protein ANHYDRO_00117 [Anaerococcus hydrogenalis DSM
7454]
gi|212677478|gb|EEB37085.1| hypothetical protein ANHYDRO_00117 [Anaerococcus hydrogenalis DSM
7454]
Length = 244
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTL 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y K
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAGQEK------- 115
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
K EEL A L N+++ K + + L + D +
Sbjct: 116 ------KTNEELLADAILVANRIIAKREEEIEE------LRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|325849035|ref|ZP_08170527.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480280|gb|EGC83343.1| phage antirepressor protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 260
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E KIR I+D++ WFV KDVA L Y N + I H + ++ +
Sbjct: 1 MNNLKIFNNHEFGKIRIILDENNEPWFVGKDVAEILEYRNGSRDIKRHVDELDRKKEMVH 60
Query: 60 EG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT- 117
+G +++ +I+E +Y L+ S + A++F+RWV EVLPT+RK G+Y + R+
Sbjct: 61 DGNQLKETILINESGLYSLIFSSKMDKAREFKRWVTSEVLPTIRKHGAYMTDNVLERSIA 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
+ + L+E + L + Q + K+ D + A
Sbjct: 121 DPDFGIALLNSLKEERARRALAEAQ----NEKNKPKVLFADTVSASK 163
>gi|66395901|ref|YP_240269.1| ORF016 [Staphylococcus phage 96]
gi|62636322|gb|AAX91433.1| ORF016 [Staphylococcus phage 96]
Length = 241
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F FE +R I + + +F+ KDVA LGY ++ AI H + + +
Sbjct: 1 MQELQTFNFEELPVRKI-EVEGEPFFLGKDVAEILGYARADNAIRNHVDSEDRLMHQISA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLPTLRKTG+Y V +
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPTLRKTGAYQVPS 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++A LR+ E KQ +KD+ + LK N+ +L+A D L
Sbjct: 120 DPMQA------LRLMFEATEETKQEIKNVKDDVIDLKENQ---------KLDAGDYNFLT 164
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ N I ++ N QR+ + +V K++G T
Sbjct: 165 RTINQRVAHIQRLHAITNQKQRSELFRDI----NSEVKKMTGASSRTN 208
>gi|288572745|ref|ZP_06391102.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568486|gb|EFC90043.1| prophage antirepressor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 376
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S +T FEFE +R +V + N W+VAKDV LG + +++ + + L G
Sbjct: 118 SDVTLFEFERMVVR-VVFINGNPWWVAKDVCDVLGLSDVSKSCSKLDEDEKLIRKLFVSG 176
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+ +ISE +Y L+++S P A++F+RWV E+LPT+RKTGSY++ + +
Sbjct: 177 QNRDTLLISESGLYILIMRSNKPGAKRFKRWVTHELLPTIRKTGSYALPGVD-PSKNGRK 235
Query: 122 VLRVHKHLEELAKQAGLKDNQLLL-----------KVNRGVTKITGVDQLEAMDIKHLPS 170
K L + + A + +++L K ++ V + + +D+ L
Sbjct: 236 EELAEKRLAIMERNANCRMAKMILKGMDAFKDVMTKESKTVFMAKYGELVTDVDLTRLLP 295
Query: 171 SDNDEYLTITQIGERLNPPQR 191
+ + T IG+ +
Sbjct: 296 RSAEPMYSATDIGKECGVSAQ 316
>gi|302380822|ref|ZP_07269286.1| BRO family, N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
gi|302311422|gb|EFK93439.1| BRO family, N-terminal domain protein [Finegoldia magna
ACS-171-V-Col3]
Length = 244
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEKLRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|195867515|ref|ZP_03079518.1| phage antirepressor protein [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|195660759|gb|EDX54013.1| phage antirepressor protein [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
Length = 244
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ V + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIVEREEEIEKLRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|256544723|ref|ZP_05472095.1| phage antirepressor protein [Anaerococcus vaginalis ATCC 51170]
gi|256399612|gb|EEU13217.1| phage antirepressor protein [Anaerococcus vaginalis ATCC 51170]
Length = 244
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDELVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|225855765|ref|YP_002737276.1| gp15 [Streptococcus pneumoniae P1031]
gi|225725028|gb|ACO20880.1| gp15 [Streptococcus pneumoniae P1031]
Length = 237
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT++ D WFV KDVA LGY + AI H K+
Sbjct: 1 MNEI--FNFHGQEVRTLIIDD-EPWFVGKDVADILGYSKARNAIALHVDEDDALKQGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRVQETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 FIALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAKSLLKKRKAR 161
>gi|301168933|emb|CBW28528.1| putative antirepressor protein encoded by prophage cp-933n
(putative antirepressor protein) [Haemophilus influenzae
10810]
Length = 289
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S ++ F FES IRT+ + WFVAKDV A+G +N+ +A+ A + T G
Sbjct: 5 SQLSTFNFESKSIRTLAINN-EPWFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTLG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ IISE +Y L+++ + +F +WV EVLPT+RKTG Y +
Sbjct: 64 GQQEMNIISESGMYTLILRCRDAVKKGSIPHRFRKWVTAEVLPTIRKTGKYESK------ 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
TS + + + L + GL + + + V+ +E + ++ LP + +
Sbjct: 118 TSVNDRTGLRNAVNMLVSKKGL----IYSDAYHLIHQRFNVESIEDLTLEQLPQAVEYVH 173
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQ 205
I GE + P++ N +R LQ
Sbjct: 174 -RIVLEGELITTPKKDECFNFEFTERELQ 201
>gi|304440044|ref|ZP_07399937.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371536|gb|EFM25149.1| phage antirepressor protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 244
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 27/225 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATS 118
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y + E
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIIGQEKKTNEELL 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
A +L ++ + E ++ G K D+L D
Sbjct: 123 ADAILVANRIIAEREEEIG-----------ELRPKADYYDKL----------VDYKLLTN 161
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 162 FRNTAKELGIPQ--NQFISFLMDKGLIYRDKKMKLLPY-ADKNKG 203
>gi|307126200|ref|YP_003878231.1| gp15 [Streptococcus pneumoniae 670-6B]
gi|306483262|gb|ADM90131.1| gp15 [Streptococcus pneumoniae 670-6B]
Length = 236
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ I F F ++RT++ D WFV KD+A LGY NS +A+ H K + T
Sbjct: 1 MNEI--FNFHGQEVRTVMFDD-EPWFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIAT 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ +I+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 AGQMRNQTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 115
Query: 120 STVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAMD 164
+ K L E L LK Q L + R V + G+D D
Sbjct: 116 IALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYAD 175
>gi|282882756|ref|ZP_06291363.1| phage antirepressor protein [Peptoniphilus lacrimalis 315-B]
gi|281297417|gb|EFA89906.1| phage antirepressor protein [Peptoniphilus lacrimalis 315-B]
Length = 244
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ TI++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTIIEKDGEFFFIANEVATMLGYANPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+++GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMEKGLIYRDKKKKLLPY-ADKNKG 203
>gi|258515121|ref|YP_003191343.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
gi|257778826|gb|ACV62720.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
Length = 299
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 16/235 (6%)
Query: 1 MSTIT-PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F +E K+RT++ + WFV DV L NS +AI+ + P ++
Sbjct: 42 MNRIQRVFNYEGQKVRTVL-INGEPWFVGVDVCNILEINNSRQAISYLDVDEKQTIPSRS 100
Query: 60 ---------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+GG Q + II+EP +Y L+++S P A+ F+RW+ EV+P++RKTG+Y +
Sbjct: 101 LTVINSDSQKGGAQYITIINEPGLYSLILRSRKPEAKAFKRWITHEVIPSIRKTGAYEMP 160
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ S R ++ + L+ +LK G ++ D + S
Sbjct: 161 GIVKDYLAMSEEDRAIAFFKKSKEFKVLEAENKILKPKAGKYD-DFLNSDGVFDWDAISS 219
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
+ + T+ Q+ + N L R G+ T + K
Sbjct: 220 TLDIGRNTMLLELRERGYLQKRKGNNWNLALRRY----EEAGWFVTKAVSQWTDK 270
>gi|300853540|ref|YP_003778524.1| putative prophage antirepressor [Clostridium ljungdahlii DSM 13528]
gi|300433655|gb|ADK13422.1| putative prophage antirepressor [Clostridium ljungdahlii DSM 13528]
Length = 257
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 27/248 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
MS I F+ E +RTI +++ I F D+A++LGY N +AI HC GV R +
Sbjct: 1 MSEIQIFKNPEFGTVRTI-EENGKIIFCGTDIASSLGYTNPQKAIKDHCREDGVTFRSVI 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
G Q+ + I E ++YRL+ S LP+A +FE WVF+EVLPT+RK G+Y
Sbjct: 60 DNIGRTQQAKFIDEGNLYRLITHSKLPAADRFEGWVFDEVLPTIRKHGAYITTQKMEEIM 119
Query: 118 SAS-------TVLRVHKHLEELAKQAGLKDNQLLLKVNR--------GVTKITGVDQLEA 162
+ T L+ + +E K +D ++ + + ++ + +
Sbjct: 120 NDPDSWIKLLTALKAEREEKECLKVQATEDKPKVVFADAVSVSDGTMLIGELAKILKGNG 179
Query: 163 MDI--KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS-----KVSGGYR 214
+DI L E I + G N P Q A L +K +S +
Sbjct: 180 LDIGQNRLFERLRQEGYLIKRKGTDYNAPTQMAMELGLFKVKETAITHSDGHVTISKTTK 239
Query: 215 PTPKGEER 222
T KG++
Sbjct: 240 VTGKGQQY 247
>gi|169824680|ref|YP_001692291.1| putative phage-associated antirepressor [Finegoldia magna ATCC
29328]
gi|325849668|ref|ZP_08170871.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|167831485|dbj|BAG08401.1| putative phage-associated antirepressor [Finegoldia magna ATCC
29328]
gi|325480009|gb|EGC83087.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 244
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +AI H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAIYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEDLLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|148998964|ref|ZP_01826398.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP11-BS70]
gi|225857837|ref|YP_002739347.1| gp15 [Streptococcus pneumoniae 70585]
gi|303255434|ref|ZP_07341498.1| hypothetical protein CGSSpBS455_08120 [Streptococcus pneumoniae
BS455]
gi|303259316|ref|ZP_07345294.1| gp15 [Streptococcus pneumoniae SP-BS293]
gi|303261072|ref|ZP_07347021.1| gp15 [Streptococcus pneumoniae SP14-BS292]
gi|303263400|ref|ZP_07349323.1| gp15 [Streptococcus pneumoniae BS397]
gi|303265565|ref|ZP_07351465.1| gp15 [Streptococcus pneumoniae BS457]
gi|303267877|ref|ZP_07353679.1| gp15 [Streptococcus pneumoniae BS458]
gi|147755172|gb|EDK62225.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
pneumoniae SP11-BS70]
gi|225721476|gb|ACO17330.1| gp15 [Streptococcus pneumoniae 70585]
gi|302597574|gb|EFL64656.1| hypothetical protein CGSSpBS455_08120 [Streptococcus pneumoniae
BS455]
gi|302637909|gb|EFL68395.1| gp15 [Streptococcus pneumoniae SP14-BS292]
gi|302639734|gb|EFL70191.1| gp15 [Streptococcus pneumoniae SP-BS293]
gi|302642573|gb|EFL72918.1| gp15 [Streptococcus pneumoniae BS458]
gi|302645005|gb|EFL75252.1| gp15 [Streptococcus pneumoniae BS457]
gi|302647173|gb|EFL77397.1| gp15 [Streptococcus pneumoniae BS397]
Length = 237
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY +AI+ H K
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G Q II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 FIALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 161
>gi|307067493|ref|YP_003876459.1| hypothetical protein SPAP_0868 [Streptococcus pneumoniae AP200]
gi|306409030|gb|ADM84457.1| Uncharacterized phage-encoded protein [Streptococcus pneumoniae
AP200]
Length = 244
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + ++ L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEVLRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|87125770|ref|ZP_01081613.1| hypothetical protein RS9917_00100 [Synechococcus sp. RS9917]
gi|86166579|gb|EAQ67843.1| hypothetical protein RS9917_00100 [Synechococcus sp. RS9917]
Length = 255
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 13/257 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + P+ FE ++IR D+ W V D AL A+ +
Sbjct: 5 SALVPYLFEGHRIRVSTDQQGEAWIVVADACAALAESPMAWAMANRRDEEEHCLHSEEGP 64
Query: 62 GIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL--RKTGSYSVEAPKLRAT 117
G + +I E + R L+ S SA++ RW+ ++LP+L R+ G+ + + A
Sbjct: 65 GADGFTLALIHEATLLRRLLNSDNASARRMRRWLTHDLLPSLQRRQEGNGELPRRSIEAI 124
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EY 176
T V + +E+ + G+ + LL V + +I A D+K S +
Sbjct: 125 RRQTAAEVLRGADEIIQLTGVSHAEALLSV---LEEIQAHSSPAASDLKQRVSQRAAVVW 181
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
LT Q+ +RL R N+ L GLQ ++ T G + G + P+
Sbjct: 182 LTANQVADRLEGTL--RHTNQRLATAGLQQRNEDDDWQLTEAGRDWGVAL---PLCSRVE 236
Query: 237 STQQLKWNSNLLVSFLQ 253
QQ+ W+ ++ Q
Sbjct: 237 RRQQILWDPAVVALLHQ 253
>gi|321157137|emb|CBW39123.1| Phage antirepressor protein [Streptococcus phage 23782]
Length = 245
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ I F F ++RT++ D WFV KD+A LGY NS +A+ H K + T
Sbjct: 10 MNEI--FNFHGQEVRTVMFDD-EPWFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIAT 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ +I+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 67 AGQMRNQTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 124
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 125 IALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 169
>gi|260556769|ref|ZP_05828987.1| gp30 [Acinetobacter baumannii ATCC 19606]
gi|260410028|gb|EEX03328.1| gp30 [Acinetobacter baumannii ATCC 19606]
Length = 262
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I+ F F ++ +R + D WF DV L + ++ + + T
Sbjct: 1 MNAISNFTFHNDYNVR-VQLIDAEPWFCLADVCCVLSVDRTSRLLRDLDEKGLADCHTPT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP--KLRAT 117
GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG Y P K
Sbjct: 60 NGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYEAPKPIEKRNYI 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + +L + + + A K + + + +TGV +++HLP +
Sbjct: 120 NNNDMLNIKRLIWCCAGHLDQK-QSVSSAIWYSLRNVTGVPSPAKFEVEHLPLLAQE--- 175
Query: 178 TITQIGERLNPPQRAR 193
+I + P +AR
Sbjct: 176 -FNRILSIIEPYLKAR 190
>gi|168494934|ref|ZP_02719077.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575159|gb|EDT95687.1| gp15 [Streptococcus pneumoniae CDC3059-06]
Length = 237
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY + AI H K+
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEDDALKQGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRVQETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAM 163
+ K L E L LK Q L + R V + G+D
Sbjct: 116 FIALFTGQKKLREQQVTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYA 175
Query: 164 D 164
D
Sbjct: 176 D 176
>gi|297588649|ref|ZP_06947292.1| phage antirepressor protein [Finegoldia magna ATCC 53516]
gi|297574022|gb|EFH92743.1| phage antirepressor protein [Finegoldia magna ATCC 53516]
Length = 244
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEDLLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|254361489|ref|ZP_04977628.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
gi|153093003|gb|EDN74024.1| possible bacteriophage antirepressor [Mannheimia haemolytica
PHL213]
Length = 225
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 2 STIT--PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPL 57
+ + F F S+ +R I+D +Q WF DV LGY N + + HCK GV+KRY
Sbjct: 3 NQVQFPVFNFNSSAVRVIIDPNQEPWFCGADVCRILGYVNESLTLQKHCKENGVSKRYLT 62
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
QK I+EP++YRL++KS P A+KFE WVFEEVLP +RKTG Y+++
Sbjct: 63 DKMQRQQKAIFINEPNLYRLIIKSRKPEAEKFEAWVFEEVLPQIRKTGKYALQ 115
>gi|326802732|ref|YP_004320550.1| BRO family, N-terminal domain protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650785|gb|AEA00968.1| BRO family, N-terminal domain protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 244
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADRNKG 203
>gi|145629495|ref|ZP_01785293.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145638991|ref|ZP_01794599.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae PittII]
gi|144978338|gb|EDJ88102.1| hypothetical protein CGSHi22121_08748 [Haemophilus influenzae
22.1-21]
gi|145271963|gb|EDK11872.1| hypothetical protein CGSHiII_02355 [Haemophilus influenzae PittII]
gi|309750953|gb|ADO80937.1| Putative prophage antirepressor protein [Haemophilus influenzae
R2866]
Length = 213
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 6/199 (3%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTE 60
+ F F+++ + TI D + IWF DV LGY N+ +A+ HCK G+AKRY +
Sbjct: 6 QFSIFNFKNSPVHTITDPNSEIWFCGTDVCDILGYVNAPDAMKKHCKEAGIAKRY-ISYP 64
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G ++ I+EP++YRL++KS P A+ FE WVFEEVLP +RKTG Y ++ +L
Sbjct: 65 SGRKEAIFINEPNLYRLIIKSRKPEAEPFEAWVFEEVLPQIRKTGKYQLQPQQLALPEPE 124
Query: 121 TVLRVHKHLEELAKQAGLK--DNQLLLKVNRGVTKITGVDQ-LEAMDIKHLPSSDNDEYL 177
EL + L Q+ + + + + M I H
Sbjct: 125 KKFSFEFTEYELEQLVWLWCGHKQMNTLLGDMIKPLETIGSYFAGMVISHHQEYRRQYKN 184
Query: 178 TITQIGERLNPPQRARFLN 196
T+ I + + P + + +N
Sbjct: 185 TLPTIQKLIAPFKASNQMN 203
>gi|168483731|ref|ZP_02708683.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|168484683|ref|ZP_02709635.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|168484796|ref|ZP_02709741.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|169834001|ref|YP_001693458.1| hypothetical protein SPH_0034 [Streptococcus pneumoniae
Hungary19A-6]
gi|307066662|ref|YP_003875628.1| prophage antirepressor [Streptococcus pneumoniae AP200]
gi|168996503|gb|ACA37115.1| gp15 [Streptococcus pneumoniae Hungary19A-6]
gi|172042037|gb|EDT50083.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|172042144|gb|EDT50190.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|172042990|gb|EDT51036.1| gp15 [Streptococcus pneumoniae CDC1873-00]
gi|306408199|gb|ADM83626.1| Prophage antirepressor [Streptococcus phage PhiSpn_200]
Length = 237
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY +AI+ H K
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G Q II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAM 163
+ K L E L LK Q L + R V + G+D
Sbjct: 116 FIALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYA 175
Query: 164 D 164
D
Sbjct: 176 D 176
>gi|168490127|ref|ZP_02714326.1| gp15 [Streptococcus pneumoniae SP195]
gi|183571458|gb|EDT91986.1| gp15 [Streptococcus pneumoniae SP195]
Length = 237
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY + AI H K+
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEDDALKQGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 58 NLGRVQETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAM 163
+ K L E L LK Q L + R V + G+D
Sbjct: 116 FIALFTGQKKLREQQVTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYA 175
Query: 164 D 164
D
Sbjct: 176 D 176
>gi|228950519|ref|ZP_04112669.1| Phage antirepressor protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228809155|gb|EEM55626.1| Phage antirepressor protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 253
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 32/255 (12%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E ++RT+V K +++WFVAKDV L +N+ +A+ + +
Sbjct: 1 MNKLQVFNNEELGQVRTVV-KGEDVWFVAKDVCEVLEIKNTTQAMQKLDPEERTMFNIGR 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+G + II+E +Y L++ S P A+ F++WV EVLP++RK GSY + +A T+
Sbjct: 60 QG---ETNIINESGLYSLIMTSRKPQAKAFKKWVTSEVLPSIRKHGSYMTDQVLEQAVTN 116
Query: 119 ASTVLRVHKHLEE--------------------LAKQAGLKDNQLLLKVNRGVTKITGVD 158
++ + +L+E A+ + N + +K + + G+D
Sbjct: 117 PDFMIGLLTNLKEEKAKRVEAERTILQQQPLVTFAEAVQVSTNLITVKQLANLMRQKGID 176
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP--T 216
+ + + + G N P + +L + + G + T
Sbjct: 177 TGQNRLFEWFRENGYLC----KKKGSLYNTPTQYSMDLELFESQEYVRTNSQGEFVTSFT 232
Query: 217 PKGEERGGKMCDVPM 231
K +G
Sbjct: 233 TKVTGKGQLYFINKF 247
>gi|320352352|ref|YP_004193691.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
gi|320120854|gb|ADW16400.1| prophage antirepressor [Desulfobulbus propionicus DSM 2032]
Length = 263
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ PF+FESN+IR + D + WFVA+DV L Y ++++A + G
Sbjct: 11 VIPFQFESNEIRALT-IDGDPWFVARDVCDVLEYADASDATQFLDDDEKLVRQIAGAGQT 69
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ + IISE +Y L+++S P A+ F +WV EVLP++RKTG Y++ RA
Sbjct: 70 RNMLIISESGLYTLIIRSNKPQAKPFRKWVTAEVLPSIRKTGGYALPNQGKRAD 123
>gi|148544366|ref|YP_001271736.1| phage antirepressor protein [Lactobacillus reuteri DSM 20016]
gi|227363210|ref|ZP_03847343.1| phage antirepressor protein [Lactobacillus reuteri MM2-3]
gi|325681629|ref|ZP_08161150.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|325682686|ref|ZP_08162202.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|148531400|gb|ABQ83399.1| phage antirepressor protein [Lactobacillus reuteri DSM 20016]
gi|227071750|gb|EEI10040.1| phage antirepressor protein [Lactobacillus reuteri MM2-3]
gi|324977036|gb|EGC13987.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
gi|324979094|gb|EGC16040.1| phage antirepressor protein [Lactobacillus reuteri MM4-1A]
Length = 267
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 27/269 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ F F ++RT+ D +F+ +D+ L Y N +AI H K +
Sbjct: 12 NEPQLFNFHGQQVRTMTLND-EPYFIGRDLTAILQYSNGPKAIRDHVDADDKLTERIVLA 70
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
G ++V +I+E +Y L++ S LP+A++F+ WV EVLP +RK G+Y +A +
Sbjct: 71 GQHREVTLINESGLYSLILGSKLPTAKEFKHWVTSEVLPAIRKHGAYMTPQTIEKALLNP 130
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
T++ + L+ +Q QL + + K D + + + I
Sbjct: 131 DTIINLATQLKREQEQRK----QLQAENEQMKPKALFADAVSTS----------NSSILI 176
Query: 180 TQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
Q+ + L N+L + K G ++ S PT + E G + +
Sbjct: 177 GQLAKILRQNGVNIGQNRLFAWMRKNGYLGTRGSNRNVPTQRSMELG--LFKTKETVINH 234
Query: 237 STQQLKWNSNLLVS-----FLQNELINTP 260
S N V+ + N+ +N P
Sbjct: 235 SDGHTTVNITTKVTGKGQQYFINKFLNAP 263
>gi|300814660|ref|ZP_07094911.1| BRO family, N-terminal domain protein [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300511279|gb|EFK38528.1| BRO family, N-terminal domain protein [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 244
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y +
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYILG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEDLLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|56419054|ref|YP_146372.1| phage associated-antirepressor [Geobacillus kaustophilus HTA426]
gi|56378896|dbj|BAD74804.1| phage associated-antirepressor [Geobacillus kaustophilus HTA426]
Length = 246
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 18/221 (8%)
Query: 1 MSTIT-PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ + F + +++RTI+ D +WFVAKDV L ++ +A+ + P+
Sbjct: 1 MNQLQKVFIYSGSQVRTIIKDD-EVWFVAKDVCEILDIADARKAVQRLDEDERSLIPVTD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ G Q+ I++EP +Y L++ S A++F+RWV EV+PT+RKTG Y T
Sbjct: 60 SLGRKQETFIVNEPGLYTLILGSRKSEAKQFKRWVTHEVIPTIRKTGGYVANDDLFVET- 118
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
KH +E K + + K N + ++ D
Sbjct: 119 ------YLKHADEQTKLLFRATLETVRKQNEQIA------AMQPKADYFDALVDRRLLTN 166
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L +A LL++ G +P +
Sbjct: 167 FRDTAKELKIKPKAFI--DWLLEKKYIYRDQKGKLKPYAQY 205
>gi|94995078|ref|YP_603176.1| phage antirepressor protein [Streptococcus pyogenes MGAS10750]
gi|94548586|gb|ABF38632.1| phage antirepressor protein [Streptococcus pyogenes MGAS10750]
Length = 244
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y V
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|325299774|ref|YP_004259691.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324319327|gb|ADY37218.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 249
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 90/240 (37%), Gaps = 26/240 (10%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E +IRT+ D+ WF DV AL + + + V+ T G QK +
Sbjct: 10 EFGEIRTVTDEKGEPWFCLMDVCKALELQTKFVKMRLRDEVVSNNLISDTIGRKQKALFV 69
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
+E +Y ++++S P A+ F RWV EVLP +RK G Y +RA V+
Sbjct: 70 NEDGLYDVILESRKPEARAFRRWVTGEVLPAIRKHGGYM----AVRANEPDEVI------ 119
Query: 130 EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP 189
LL+ + + +LE D+ +T TQ+ + L
Sbjct: 120 ---------LSRALLIMQKALERRDKRIAELEPRAAYADEVIDSVSCMTTTQVAKGLG-- 168
Query: 190 QRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV----EGSTQQLKWNS 245
A LN+ L + G+Q + SG Y +G M + L W
Sbjct: 169 MTAIELNRRLCRLGIQYCQ-SGQYLLYAGYARQGYAQNRTYMYRDAEGETHTRAYLVWTE 227
>gi|322806605|emb|CBZ04174.1| phage antirepressor protein [Clostridium botulinum H04402 065]
Length = 261
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/246 (29%), Positives = 105/246 (42%), Gaps = 31/246 (12%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPL 57
MS + F+ E +RTI K+ IWFV KDVA LGYE +AI K
Sbjct: 1 MSNLQIFKNQEFGSVRTIKKKN-EIWFVGKDVAKCLGYERPTKAIQDRVDNEDKDEVPIQ 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPK 113
+ G Q II+E +Y L++ S LP+A+KF+RWV EVLP +RK G Y+ ++ P
Sbjct: 60 DSMGRNQNTPIINESGLYSLVLSSKLPAAKKFKRWVTSEVLPNIRKYGMYAKDELLDNPD 119
Query: 114 L---RATSASTVLRVHKHLEELAKQAG----------LKDNQLLLKVNRGVTKITGVDQL 160
L AT K L+E K+ + +L+ + K G+D
Sbjct: 120 LLIQVATELKKEREEKKLLQEQMKKQKPKVLFADAVSVAHTSILVGDLAKLIKQNGID-- 177
Query: 161 EAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS-----KVSGGYR 214
+ K L + + I + G N P Q + L +K +S +
Sbjct: 178 --IGAKRLFAWLRENGYLIRRKGTDYNMPTQYSMDLGLFEVKETSITHSDGHISISKTPK 235
Query: 215 PTPKGE 220
T KG+
Sbjct: 236 ITGKGQ 241
>gi|321157186|emb|CBW39171.1| Phage antirepressor protein [Streptococcus phage 11865]
Length = 245
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ I F F ++RT++ D WFV KD+A LGY NS +A+ H K + T
Sbjct: 10 MNEI--FNFHGQEVRTVMFDD-EPWFVGKDIAEILGYVNSRDALAKHVDEDDKLTSQIAT 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ +I+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 67 AGQMRNQTVINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDAF 124
Query: 120 STVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAMD 164
+ K L E L LK Q L + R V + G+D D
Sbjct: 125 IALFTGQKKLREQQTSMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYAD 184
>gi|330810751|ref|YP_004355213.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378859|gb|AEA70209.1| Putative phage regulatory protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 283
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+++ PF+F+ IR I D+ + WFVA+DVA ALGY AI+ HCK +
Sbjct: 28 NSVIPFDFDGGAIRVITDELGDPWFVARDVADALGYAKPENAISRHCKA----ATTTPKQ 83
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G + +I E DVYRL+++S L A++FE WV EVLP++RKTG + +P S+S
Sbjct: 84 GGGFMTVIPERDVYRLVMRSKLVGAERFEEWVVGEVLPSIRKTGKFDAASP-----SSSK 138
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSDNDEYL-- 177
V+ +E + + ++ + + + G+D L + P + +
Sbjct: 139 VVGELALMECYTRLLKPSPSSQVMMLAK-IATNNGLDAKFLPGYAVDAAPDAAGGSSMPT 197
Query: 178 -TITQIGERLNPPQRARFLNKLLLKRG----LQVSKVSGG----YRPTPKGEERGGKMCD 228
++T + + N + + G LQ G + T KG + G +
Sbjct: 198 KSVTALLKDNGIRYAPAAFNNSMARLGFLKQLQRQNSKGEMVPFWSVTEKGLQYGKNL-T 256
Query: 229 VPMQHVE 235
P E
Sbjct: 257 SPQCPRE 263
>gi|71898940|ref|ZP_00681107.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71731352|gb|EAO33416.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/161 (36%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ +I PF+F S+ +R ++ +D N WF+A DVA ALGY ++ A H KG +
Sbjct: 1 MTRSIIPFDFHSHVVRVVM-RDGNPWFIATDVAVALGYRDAANAARHVGLHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q++ I+SE +YRL+++S P A F WV +EVLP++RKTGSYS +
Sbjct: 57 VSTIKGNQELTIVSEGGLYRLVLRSRKPEAVAFSDWVTDEVLPSIRKTGSYSTTGTMVND 116
Query: 117 TSASTVLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + + H ++L + + + K Q L G T+I+G
Sbjct: 117 DALCAIWFLCDHFKKLHEMSRVNKVPQALY--WLGATEISG 155
>gi|183603712|ref|ZP_02964456.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183603728|ref|ZP_02964463.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183603747|ref|ZP_02964470.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575125|gb|EDT95653.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575245|gb|EDT95773.1| gp15 [Streptococcus pneumoniae CDC3059-06]
gi|183575276|gb|EDT95804.1| gp15 [Streptococcus pneumoniae CDC3059-06]
Length = 252
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY + AI H K+
Sbjct: 16 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYSKARNAIALHVDEDDALKQGLTD 72
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP A++F+RWV EVLP +RK G + E L +
Sbjct: 73 NLGRVQETIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRKQGGFIRE--DLDEDA 130
Query: 119 ASTVLRVHKHLEE-----LAKQAGLKDNQ----------LLLKVNRGVTKITGVDQLEAM 163
+ K L E L LK Q L + R V + G+D
Sbjct: 131 FIALFTGQKKLREQQVTMLEDIDYLKSEQPIHPSYAQSLLKKRKARVVACLGGIDSPAYA 190
Query: 164 D 164
D
Sbjct: 191 D 191
>gi|289706266|ref|ZP_06502628.1| toxin-antitoxin system, toxin component, Bro family [Micrococcus
luteus SK58]
gi|289556989|gb|EFD50318.1| toxin-antitoxin system, toxin component, Bro family [Micrococcus
luteus SK58]
Length = 261
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 17/223 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ +TPF++ + +RT V D FVA D+ L +A + + T
Sbjct: 1 MTALTPFQYGATAVRTAV-IDGEPHFVAADLCAVLEIGRQQDATRYLDADEKRGCLVDTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q + +++E +Y L+++S P A+ F+RW+ EVLP +RKTG+YSV+
Sbjct: 60 SGPQTMVVVTEAGMYSLVLRSRKPEAKAFKRWLTHEVLPAIRKTGAYSVQRELTEDEIIH 119
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L + K L KV K+ + + + +
Sbjct: 120 RALTL----------TVAKVEALEAKVAEDAPKVAAWESIVSSAGSWSYNDAAKVLCESG 169
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
QI + L K L+ G G + E+G
Sbjct: 170 QI------EIGEKRLVKALVDWGYLYRDAKGRPHVYQRYVEQG 206
>gi|238821325|ref|YP_002925141.1| hypothetical protein PH10_gp08 [Streptococcus phage PH10]
gi|238804907|emb|CAY56501.1| hypothetical protein [Streptococcus phage PH10]
Length = 237
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ D WFV KDVA LGY +AI+ H K
Sbjct: 1 MNEI--FNFHGQEVRTLTIDD-EPWFVGKDVADILGYAKPLDAISRHVDEDDSVKYGLTD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G Q II+E +Y L++ S LP A++F+RWV EVLP +R+ G + E L +
Sbjct: 58 NLGRTQNTIIINESGLYSLILSSKLPQAKEFKRWVTSEVLPAIRRQGGFIRE--DLDEDA 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ K L E +QA + ++ LK + + L+ +
Sbjct: 116 FIALFTGQKKLRE--QQATMLEDIDYLKSEQPIHPSYAQSLLKKRKAR 161
>gi|22296547|ref|NP_680507.1| putative antirepressor [Lactobacillus phage A2]
gi|6599316|emb|CAB63662.1| putative antirepressor [Lactobacillus phage A2]
Length = 160
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYP 56
M+ + F+F+ ++RT+V D FV KD+A LGY A+N + KGV K
Sbjct: 1 MNELQHFDFKGRQVRTVVV-DNEPMFVGKDIAEVLGYSKPANAVNKYVPDKFKGVTK--- 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
L T GG Q +I+EP +Y+L+ KS +P+A +F WV E+VLP++RK G+Y +A
Sbjct: 57 LMTPGGKQDFVVIAEPGLYKLVFKSDMPNADEFTDWVAEKVLPSIRKHGAYMTPETIEKA 116
Query: 117 T-SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+ ++ + L++ K +L K D +
Sbjct: 117 IYNPDFIINLATQLKD----EQAKTAELTADNETMKPKALFADAVAT 159
>gi|325847959|ref|ZP_08170113.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480787|gb|EGC83842.1| BRO family, N-terminal domain protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 244
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKMFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYSLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|153806485|ref|ZP_01959153.1| hypothetical protein BACCAC_00749 [Bacteroides caccae ATCC 43185]
gi|149131162|gb|EDM22368.1| hypothetical protein BACCAC_00749 [Bacteroides caccae ATCC 43185]
Length = 255
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 15/218 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ F S IR + + WFVAKDV LG +AI + T GG
Sbjct: 42 EVFTFNQNSTPIR-VQVINNEPWFVAKDVCDVLGISKYRDAIARLDDDEGCPIEVDTLGG 100
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
+QK+ ++E +Y L+++S P A+ F +WV EVLP++RK G Y ++ A +
Sbjct: 101 MQKMAAVNESGLYTLILQSRKPEAKPFRKWVTSEVLPSIRKKGYYGIKKQANNYLDARDI 160
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-------TGVDQLEAMDIK----HLPSS 171
+ + + + L +N I +L A ++ H+ +
Sbjct: 161 PYTKQLFNGCEIRTITIEGKQWLSMNDFHRAIGSSTESSQAAKKLNAKEVNAQKIHIFGN 220
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
+ + IT G L + N + + LQ S++
Sbjct: 221 THPSWF-ITMTGAMLLLSCSRKMQN--MRQLELQFSEL 255
>gi|125974244|ref|YP_001038154.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125714469|gb|ABN52961.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 254
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+ I+ D +F A D A LGY + +AIN H KG K L T
Sbjct: 1 MNELQVFKNTEFGELNILVIDGKEYFPATDCARILGYSDPYDAINRHTKGSVKHRVL-TS 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
GG Q+++ I E D+YRL+VKS LP A++FERWVF+EVLP++RK G Y+ + +
Sbjct: 60 GGEQEIKFIPEGDLYRLIVKSKLPKAERFERWVFDEVLPSIRKHGIYATDKVIEEMLNNP 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
T+++ + L+E K K+ + KI ++ + +E L
Sbjct: 120 DTMIKTLQALKEERK-----------KIQKLTEKI---EEQDKKLELFRNLQRLNEMLRA 165
Query: 180 TQIGERLNPPQRARFLNKLLLKRGL 204
+ IG A+ N+++ G+
Sbjct: 166 SDIGMYYGIT--AQEFNRIMQDAGV 188
>gi|193077627|gb|ABO12461.2| hypothetical protein A1S_2034 [Acinetobacter baumannii ATCC 17978]
Length = 266
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I+ F F ++ +R + D WF DV L + ++ + + T
Sbjct: 1 MNAISNFTFHNDYNVR-VQLIDAEPWFCLADVCCVLSVDRTSRLLRDLDEKGLADCHTPT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP--KLRAT 117
GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG Y P K
Sbjct: 60 NGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTGKYEAPKPVEKRNYL 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP--SSDNDE 175
+ S + + + + A G K + + +TGV +++HLP + +
Sbjct: 120 NNSDMNNIKRLIWTCADHFGHK-GSFNQAIWACLRDVTGVPSPAKFEVEHLPVLAEEFKR 178
Query: 176 YLTITQ 181
L I Q
Sbjct: 179 ILNIVQ 184
>gi|325674674|ref|ZP_08154361.1| phage antirepressor protein [Rhodococcus equi ATCC 33707]
gi|325554260|gb|EGD23935.1| phage antirepressor protein [Rhodococcus equi ATCC 33707]
Length = 257
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 41/259 (15%)
Query: 1 MS----TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + PF++E+ ++R ++D D WFV D+ LG + + +GV++ +
Sbjct: 1 MSDATAQLVPFQYENERVR-VLDIDGEPWFVLTDLCRVLGLGTPSRVRDRLAEGVSQTHT 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
L+T GG Q++ ++SEP +Y ++++S P A +F RW+ EVLPT+R+TG+Y A
Sbjct: 60 LQTAGGPQQMILVSEPGMYEVVIRSDKPEAARFRRWITSEVLPTIRRTGAYGTPALTGPE 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
A ++ E + KD + K VD+ A +
Sbjct: 120 LMARALV-------EAKQVLAAKDATI----AELAPKAAYVDEFVADED----------L 158
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY----------RPTPKGEERGGKM 226
+ + +L + A L + L++ + E+
Sbjct: 159 IQFRTLANQLQIGEAA--LRETLIEHRWIYRVTGSRWSNSKGRKETIHQYRAFAEKKPYF 216
Query: 227 CDVPMQ---HVEGSTQQLK 242
P+ V G QQ
Sbjct: 217 RLRPLHKAPRVNGEVQQTL 235
>gi|227431802|ref|ZP_03913829.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352485|gb|EEJ42684.1| prophage LambdaSa2, antirepressor protein [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 237
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ + F FE++++RT+ +D IWFV KDVA LGY S A++ H K + +
Sbjct: 3 NEVQVFNFETSRVRTLNLED-VIWFVGKDVADTLGYSASRNALSKHVDNDDKLTHQISAS 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G +++ +I+E +Y L++ S P+A+KF+RWV EVLPT+R+TG Y + APK
Sbjct: 62 GQKREMTLINESGLYSLILSSKQPNAKKFKRWVTSEVLPTIRQTGGYQL-APKDPMQVLE 120
Query: 121 TVLRVHKHLEELAKQAG-----LKDNQLLLKVNRGV-TKITGVDQLEAMDIKHLPSSDND 174
+ + K + ++ ++D+Q + V +I ++ + K
Sbjct: 121 LMFQSLKMQDYRQERLERKINSIQDSQTISGDQELVLRQIRNEKAVQILGYKGNARYQAL 180
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
+ +I + N LL K + + + P
Sbjct: 181 SRMVFARISKEFKSKFSIPRYNALLAKDFEKAKRYLMKWEP 221
>gi|167034436|ref|YP_001669667.1| prophage antirepressor [Pseudomonas putida GB-1]
gi|166860924|gb|ABY99331.1| prophage antirepressor [Pseudomonas putida GB-1]
Length = 285
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-----GVAKRYPL 57
T+ F FE +R ++ D WF A+DVA LGY N +A+ HCK GV + L
Sbjct: 25 TVNLFNFEGFDVRVVLV-DGEPWFSARDVAEGLGYSNPQKAVRDHCKSPRPVGVNDSFTL 83
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
II E DVYRL+++S +P A++FE WV EVLP++RKTG Y+ A +
Sbjct: 84 GPS-----ANIIPERDVYRLVMRSKMPQAERFEEWVVSEVLPSIRKTGGYTAPAQPADLS 138
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + +++A + L ++V KI ++ L + H+ +
Sbjct: 139 KLEIL-----QMALESEKARVL---LTVQVEAQAKKIDHLENLFKEGMSHVQFCKGLNGV 190
Query: 178 TITQIGERLN 187
+ Q+G L
Sbjct: 191 NVMQVGHFLE 200
>gi|303233469|ref|ZP_07320133.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
gi|302495420|gb|EFL55162.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
Length = 244
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE + T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKIFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKTWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELTPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|163937954|ref|YP_001642839.1| prophage antirepressor [Bacillus weihenstephanensis KBAB4]
gi|163865809|gb|ABY46864.1| prophage antirepressor [Bacillus weihenstephanensis KBAB4]
Length = 256
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ + F E ++RT+V K +++WFVAKDV L N+ +++ + +
Sbjct: 1 MNQLQVFNSEEFGQVRTVV-KGKDVWFVAKDVCDVLEIVNATRSLSRLDEDELHSMKVAD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
+ G +Q+ II+E +Y +++ S P A+ F++WV EVLP++RK G+Y + +A T
Sbjct: 60 SLGRLQETNIINESGLYSIIMTSRKPQAKAFKKWVTSEVLPSIRKHGAYMTDQVLEQAVT 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + L+E ++ ++ + +T + D +
Sbjct: 120 NPDFAIGLLTKLKEEKEKL----AAAQQQIVQQQPLVTFAEACMQSD-------QTLKVS 168
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
+ ++ + N R L L + L + + +P
Sbjct: 169 EVAKLAAKHNIKIGQRQLFAKLREWNLMFKRSTEPTQP 206
>gi|311064272|ref|YP_003970997.1| phage antirepressor protein [Bifidobacterium bifidum PRL2010]
gi|310866591|gb|ADP35960.1| phage antirepressor protein [Bifidobacterium bifidum PRL2010]
Length = 264
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 99/248 (39%), Gaps = 27/248 (10%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-ENS-NEAINAHCKGVAKRYPL 57
M+ I F+F +RT+ D+ WFVAKD LG N EA++ + +
Sbjct: 1 MNNEIQRFDFRGASLRTLTDEAGEPWFVAKDACDILGIDTNHLREALDDDEITNLRNSEV 60
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLR 115
+ G + IISEP +Y+L+++S P A++F+RWV EVLP +RKTG Y + +A
Sbjct: 61 WNQPGRAPL-IISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPAIRKTGGYIPTTDADDDM 119
Query: 116 ATSASTVL--------------RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
A V+ + EL +A D V ++ + +
Sbjct: 120 TILAKAVMIGQRTMEAQKQKITEQQTRIVELEPKARFADAVAASDGTCLVGELAKMLRQN 179
Query: 162 AMDI--KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVS-----KVSGGYR 214
MDI L + R P QRA L +K VS +
Sbjct: 180 GMDIGQNRLFRLLQADGYLGKSGSNRNVPTQRAMDLGLFRIKETTVTHADGHTTVSRTPK 239
Query: 215 PTPKGEER 222
T KG+
Sbjct: 240 VTGKGQRY 247
>gi|270296825|ref|ZP_06203024.1| phage antirepressor protein [Bacteroides sp. D20]
gi|270272812|gb|EFA18675.1| phage antirepressor protein [Bacteroides sp. D20]
Length = 257
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ I F+ E K+R +++++ F DV +G ++++ + V + +P+
Sbjct: 1 MNNIQIFQNEQFGKVRIAMNENEEPLFCLADVCAVIGIKDTSRCASRLDDDVRQTHPIKD 60
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
G Q+ ++E +Y ++++S A+ F +WV EVLP++RK G+Y + +A T
Sbjct: 61 NLGRTQQATFVTESGLYDVVIRSDSEKAKPFRKWVTSEVLPSIRKHGAYMTQETLEKALT 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD----IKHLPSSDN 173
S ++++ +L+E KQ ++ Q K+ + K+ D + + L
Sbjct: 121 SPDFLIQLATNLKE-EKQKRIEAEQ---KIQKDAPKVLFADAVSTSQRSCLVAELAKILQ 176
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ I Q N N L ++G ++ PT K + G
Sbjct: 177 QNGVNIGQ-----NRLFSWMRENGYLCQKGDYYNQ------PTQKAMKLG 215
>gi|299144345|ref|ZP_07037425.1| toxin-antitoxin system, toxin component, Bro family [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298518830|gb|EFI42569.1| toxin-antitoxin system, toxin component, Bro family [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 243
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 22/220 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS++ FE T+++KD +F+ K+VA LGY N+ +A+ H K + +
Sbjct: 1 MSSLITFENMEFGKLTVMEKDGEFFFIGKEVAEKLGYANTRDALVRHVDIDDKADVVFHD 60
Query: 61 GG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + + I+E +Y L++ S LP A+ F+RWV EVLP++RK G Y
Sbjct: 61 GRQRRNMVSINESGLYALILSSKLPQAKDFKRWVTTEVLPSIRKNGGYI----------- 109
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+E + N +LL + K ++ LE +N
Sbjct: 110 --------KNQEKMSNEEILANAVLLANHLIAEKEKIIEDLEPKAKYFDELVNNHLLTNF 161
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L+ PQ+A + L+ + L P K
Sbjct: 162 RNTAKELHIPQKAFI--QFLIDQNLIYRDKKNRLLPYAKN 199
>gi|313889093|ref|ZP_07822749.1| BRO family, N-terminal domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844833|gb|EFR32238.1| BRO family, N-terminal domain protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 244
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE + T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKKFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|313890912|ref|ZP_07824535.1| BRO family, N-terminal domain protein [Streptococcus pseudoporcinus
SPIN 20026]
gi|313120709|gb|EFR43825.1| BRO family, N-terminal domain protein [Streptococcus pseudoporcinus
SPIN 20026]
Length = 244
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ + L P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKRLIYRDKKKKLLPY-AYKNKG 203
>gi|19745462|ref|NP_606598.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|21910223|ref|NP_664491.1| putative antirepressor - phage associated [Streptococcus pyogenes
MGAS315]
gi|28876152|ref|NP_795379.1| hypothetical protein SpyM3_0687 [Streptococcus pyogenes phage
315.1]
gi|28896075|ref|NP_802425.1| antirepressor (phage associated) [Streptococcus pyogenes SSI-1]
gi|19747577|gb|AAL97097.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|21904417|gb|AAM79294.1| putative antirepressor - phage-associated [Streptococcus pyogenes
phage 315.1]
gi|28811325|dbj|BAC64258.1| putative antirepressor (phage associated) [Streptococcus pyogenes
SSI-1]
Length = 239
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ I F F K+RT+ + +FV KDVA LGY+N +AI H K +
Sbjct: 1 MNEI--FNFNGQKVRTLTINN-EPYFVGKDVADVLGYQNPQKAIRDHVDFDDKLTEQIVQ 57
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G +++ II+E +Y L++ S L A++F+RWV EVLP +RK G+Y E A
Sbjct: 58 SGQNREMIIINESGLYSLILSSKLQQAKEFKRWVTSEVLPQIRKQGAYVPENLSDEA 114
>gi|284009383|emb|CBA76571.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 254
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 1 MSTITPFEF---ESNKIRTIVDKDQNIWFVAKDVATALGY-ENSNEAINAHCKGVAKRYP 56
M+T F E++ +R I WF KDV L S E KG+ K
Sbjct: 1 MTTAQAISFSFQETHNVR-IQIISGEPWFCLKDVCEILSIIVASPERFRMDDKGITKHVT 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T+GG Q++ ++EP++YR++ +S P A++F+ WVF EVLP++RKTG Y P+ +
Sbjct: 60 -PTKGGNQQLVYVNEPNLYRVIFRSNKPEAKQFQDWVFNEVLPSIRKTGRYDRHQPQPQT 118
Query: 117 TSASTV----LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
+A R HL + V + ++TG E ++H+P
Sbjct: 119 KAAERFSHSDSRNLTHLVWCMTNGLRFERSWSNAVWLALREVTGTPSPERFQVEHIPLM- 177
Query: 173 NDEYLTITQIGERLNPPQRARF---LNKLLLKR 202
DE I I E L + +LL KR
Sbjct: 178 ADECRRIYYITESLRQIINDAEKQVIKRLLRKR 210
>gi|162290117|ref|YP_001604100.1| putative anti-repressor protein [Staphylococcus phage phiMR11]
gi|161958547|dbj|BAF95102.1| putative anti-repressor protein [Staphylococcus phage phiMR11]
Length = 229
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F FE +RT ++ D +FV D+A LGY+ AI H K L
Sbjct: 1 MQALQTFNFEELPVRT-LEVDGEPYFVGSDIAKILGYQKPQNAIATHVDSEDKTTTLIQG 59
Query: 61 GGIQ---KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
G II+E +Y L+ S L +A++F+RWV EVLPTLR+TG+Y + P +
Sbjct: 60 TGSNYKSNAVIINESGLYSLIFSSKLENAKRFKRWVTSEVLPTLRRTGTYQTK-PLTTSE 118
Query: 118 SASTVLRVHKHLEELAKQ 135
+ + + L+E +
Sbjct: 119 QIQLIAQGNTELDERVTK 136
>gi|307154373|ref|YP_003889757.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306984601|gb|ADN16482.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 253
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS +T F FE ++R + D W VA+DV LG E++ +A+ + T
Sbjct: 1 MSNLTIIFTFEEQQVRFVGTTDNPEW-VAQDVCDVLGIESARDALQDFDPDEKGIAAIPT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG++ + ++E +YRL+ +S P A+KF+RW+F EV+P++R+TGSYSV +
Sbjct: 60 SGGLRSMLTVTEAGLYRLIFRSNKPVAKKFQRWIFHEVIPSIRRTGSYSVPGANTEVETI 119
Query: 120 STVLRVHKHLEELAKQAGL-----------KDNQLLLK------VNRGVTKITGVDQLEA 162
RV + E AK + + ++++ V+ + ++ +++
Sbjct: 120 GLAERVERLELEQAKTKEMLSIILQSITTVHNKEIIIDKPDEKTVDLILHQLEKLNKSTQ 179
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY----RPTPK 218
+ + I Q+ +RL RAR + + + S + + K
Sbjct: 180 GKLVPNQQELPRKLALIIQLSKRLGAV-RARDVKQYIWSCKTDDSSLIREWFGDLEKMGK 238
Query: 219 GEERGG 224
G+ G
Sbjct: 239 GKVSGS 244
>gi|159039271|ref|YP_001538524.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|159039322|ref|YP_001538575.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|157918106|gb|ABV99533.1| prophage antirepressor [Salinispora arenicola CNS-205]
gi|157918157|gb|ABV99584.1| prophage antirepressor [Salinispora arenicola CNS-205]
Length = 283
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 25/245 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
IT FEF +RT+ + WFVA DV AL N +A++ ++ P+ T+ G
Sbjct: 21 EITTFEFGDLPLRTVTVGN-EPWFVAVDVCRALEIGNPRQAVSYLDDDEVRQAPVTTDDG 79
Query: 63 IQKV---RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+V ++SE +Y L+++S P A+ F+RWV +VLP +R TG Y P + + A
Sbjct: 80 SDRVLMTNVVSEAGLYSLILRSRKPEAKAFKRWVTHDVLPAIRATGRYE-SVPAVPQSYA 138
Query: 120 STVLRVHKHLEEL-AKQAGLKDNQLLLKVNRGVTKITGVDQL--EAMDIKHLPSSDNDEY 176
+ +L A+ A L + + G + A + P D E
Sbjct: 139 DALQLAADQARQLDAQAAELAEAAPKAASWDTLASAEGDWSVRDAAKVLSRDPGLDLGER 198
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
T +GE+ + + ++ + G +RP + E G + ++P H
Sbjct: 199 RLFTVLGEQ-----------QWIYRQ-----RADGRWRPYQRAIESG-WLSELPSTHYHP 241
Query: 237 STQQL 241
T +L
Sbjct: 242 RTGEL 246
>gi|294678098|ref|YP_003578713.1| BRO family protein [Rhodobacter capsulatus SB 1003]
gi|294476918|gb|ADE86306.1| BRO family, N-terminal domain protein [Rhodobacter capsulatus SB
1003]
Length = 249
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 32/238 (13%)
Query: 1 MSTITPFEF---ESNK----IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK 53
M+ +T F+F E + +RT+ D WF+A+DV LG +N +A+ +
Sbjct: 1 MNELTTFQFQPAEGTESARPVRTVT-IDGEPWFIARDVCDVLGLDNVTKALLSLDPDEKA 59
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+++ GG Q IISE +Y L+++S P A+ F +WV VLPT+RKTGSY
Sbjct: 60 LNNVQSLGGAQTTNIISESGLYALVLRSRRPEAKAFRKWVTATVLPTIRKTGSYVRGEEA 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T+ + + H+ L+ K + + ++
Sbjct: 120 FDVTTEAGLAAATMHV------------MAALQAKADGFKAMY-EAAKPKADAFAVIAEA 166
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
+T+T+ + L + L L R + KG +
Sbjct: 167 TGSMTVTEAAKAL--KAKRVDLYGFLEHR---------KWVTKGKGRQATAYALRTGY 213
>gi|325478398|gb|EGC81513.1| BRO family, N-terminal domain protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 244
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++K +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFGKLTVIEKGGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP++RK G Y
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D +
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|169633393|ref|YP_001707129.1| hypothetical protein ABSDF1750 [Acinetobacter baumannii SDF]
gi|169152185|emb|CAP01089.1| hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 260
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 15/248 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS ++ F F N+IRTIV D IWF+A DVAT LGY N+ + + A + L+
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFIAADVATVLGYRNAPDMVRNLDVDEADTHNLRIR 60
Query: 61 G-----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY----SVEA 111
++V II+E +Y +KS P A++F++WV +VLP++RK G Y +
Sbjct: 61 SENGVLQDRQVSIINESGLYSATLKSRKPEAKQFKKWVTSDVLPSIRKNGGYISGQENDD 120
Query: 112 PKLRATSASTVLR--VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
P++ A V + + +EL + +D+ + K G + + +
Sbjct: 121 PEIIMAKALQVANNVIIRKTQELQQAQAERDHAITTKAEIGSHREATAMATASKFKRENE 180
Query: 170 SSDNDEYLTITQIG-ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCD 228
+I+ +N + F NK + L + K +G + +
Sbjct: 181 DLKQKLGESISFAAVASINTKLKTNFGNK---EGRLLSKYSREHHLEIKKATVQGQRFSE 237
Query: 229 VPMQHVEG 236
V H +
Sbjct: 238 VNSYHRDA 245
>gi|41179234|ref|NP_958573.1| putative antirepressor [Lactobacillus prophage Lj965]
gi|42518392|ref|NP_964322.1| Lj965 prophage antirepressor [Lactobacillus johnsonii NCC 533]
gi|38731504|gb|AAR27450.1| putative antirepressor [Lactobacillus prophage Lj965]
gi|41582677|gb|AAS08288.1| Lj965 prophage antirepressor [Lactobacillus prophage Lj965]
Length = 278
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LK 58
M+ + F+FE+N+IR ++ + WFV KD+A LGY N+ +AI H R +
Sbjct: 3 MNNELQLFDFENNQIR-VLKINNEPWFVGKDLANVLGYSNTQKAIRDHIDPDDLRGERIV 61
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T G Q I +E +Y L++ S LPSA+KF+RWV EVLP +R+ G+Y + ++ S
Sbjct: 62 TPSGKQMTIITNESGMYSLILSSKLPSAKKFKRWVTSEVLPAIREDGAYITDNKAMQLMS 121
Query: 119 AS--------TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
T+ K LE K+ + + K+ R + +
Sbjct: 122 DPQELGNFLLTIGNRVKALEAEKKELKDTNAKQAAKIARDADDVVFAKAIR 172
>gi|155042960|ref|YP_001425627.1| Phage associated-antirepressor [Bacillus virus 1]
gi|115529864|gb|ABJ09643.1| associated-antirepressor [Bacillus virus 1]
Length = 244
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/220 (28%), Positives = 94/220 (42%), Gaps = 16/220 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLKT 59
M+ I F E ++ ++ I+F A DVA LGY N ++AI HCK T
Sbjct: 1 MTEIRAFNHEMFGELQVLVENGEIYFPATDVAIILGYTNPHKAIKDHCKEKGVTIRSAPT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q+ + I+E ++YRL+ +S LP A+KFE WVF+EVLPT+RKTG Y T
Sbjct: 61 AGGEQQKKFITEGNLYRLIARSKLPEAEKFESWVFDEVLPTIRKTGGYVSNDEMFINTYL 120
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
K + + + N+ ++ K+ D L D +
Sbjct: 121 PFADEQTKLMFRGVLETVRRQNE---QIAAMKPKVEYFDAL----------VDRNLLTNF 167
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L +R F+N LL+ G +P
Sbjct: 168 RDTAKELKIKERY-FIN-WLLENKFVYRDQKGKLKPYAAY 205
>gi|22538015|ref|NP_688866.1| prophage LambdaSa2, antirepressor protein, putative [Streptococcus
agalactiae 2603V/R]
gi|22534917|gb|AAN00739.1|AE014276_20 prophage LambdaSa2, antirepressor protein, putative [Streptococcus
agalactiae 2603V/R]
Length = 236
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
M+ I F F ++RT+ + WFV KDVA LGY S AI H K+
Sbjct: 1 MNEI--FVFHGQEVRTVTINN-EPWFVGKDVADILGYSKSRNAIALHVDEDDALKQGITD 57
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G +Q+ II+E +Y L++ S LP ++F+RWV EVLP +R+ G+Y E L +
Sbjct: 58 NLGRMQETIIINESGLYSLILSSKLPQVKEFKRWVTSEVLPQIRQQGAYVPE--NLSDEA 115
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
+ K L+E Q L + LK + +
Sbjct: 116 FIALFTGQKKLKE--HQLALAQDVDYLKNEQPIH 147
>gi|303233996|ref|ZP_07320645.1| toxin-antitoxin system, toxin component, Bro family [Finegoldia
magna BVS033A4]
gi|302494921|gb|EFL54678.1| toxin-antitoxin system, toxin component, Bro family [Finegoldia
magna BVS033A4]
Length = 256
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 1 MSTITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E +IRT+ K+ WFVA DV AL N + + ++ L
Sbjct: 1 MNDLQIFKNNEFGEIRTVT-KNNEPWFVAIDVCNALELSNPTVVVGRLDEDERTKFNLGR 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
+G I+SE +Y L++ S A+KF+RW+ EV+P++RK G+Y S E + +
Sbjct: 60 QG---MTNIVSEYGLYNLILASRKKEAKKFKRWITHEVIPSIRKHGAYMSSEVIEKTLSD 116
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
++R+ +L+E + L + Q+ R K+ D +
Sbjct: 117 PDYLIRLATNLKEEKAKRALAEAQI----ERDKPKVLFADTV 154
>gi|330977751|gb|EGH77654.1| hypothetical protein PSYAP_13385 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 140
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+TPF+F IR + +F+AKD+A ALGY N+++AIN HCK V+ + G
Sbjct: 29 QVTPFDFHGFPIRVLDSIHGEPYFIAKDIAEALGYANTSKAINTHCKAVS-TCHTEMGGQ 87
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ V+II E D+YRL++KS LP+A++FE WV +VLP++RKTGSY+V+
Sbjct: 88 VRAVQIIPERDLYRLVMKSKLPAAEQFEEWVVGQVLPSIRKTGSYAVQE 136
>gi|255652573|ref|ZP_05399475.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 261
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 4 ITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEG 61
+ F+ E +IR +++K WFV KDVA LGY NS +A+ H K T
Sbjct: 7 VEVFKNEQFGEIR-VLEKGGEPWFVGKDVAEMLGYSNSRDALKKHIDEEDKGVAKCDTLR 65
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAS 120
G Q + II+E +Y L++ S L A+KF+RWV EVLPT+R+ G+Y + ++
Sbjct: 66 GRQILTIINESGLYSLILSSKLAEAKKFKRWVTNEVLPTIRRHGAYLTDDKIEEILSNPD 125
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
T++++ L+E ++ + +++ K + + + + E
Sbjct: 126 TIIKLATELKEKREKIKQLETEVVHKEDVIIGLVEDISLAEKRQ 169
>gi|323517747|gb|ADX92128.1| prophage antirepressor [Acinetobacter baumannii TCDC-AB0715]
Length = 253
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 12/243 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ ++ F F ++RTIV KD IWFV DV L N + A + + E
Sbjct: 1 MNNVSVFNFNQKEVRTIVKKDGEIWFVLSDVCNVLEIGNVSMAASRLDAEEITLSTI--E 58
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY----SVEAPKLRA 116
G + +++E +Y L++ S P A++F++WV +VLP++RK G Y + P++
Sbjct: 59 GSHRPTNLVNESGLYSLVLTSRKPEAKQFKKWVTSDVLPSIRKNGGYISGQENDDPEIIM 118
Query: 117 TSASTVLR--VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
A V + + +EL + +D+ + K G + + +
Sbjct: 119 AKALQVANNVILRKTQELQQAQAERDHAITTKAEIGSRREATAMATASKFKRENEDLKQK 178
Query: 175 EYLTITQIG-ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQH 233
+I+ +N + F NK + L + K +G + +V H
Sbjct: 179 LGESISFAAVASINTKLKTNFGNK---EGRLLSKYSREHHLEIKKATVQGQRFSEVNSYH 235
Query: 234 VEG 236
+
Sbjct: 236 RDA 238
>gi|154498735|ref|ZP_02037113.1| hypothetical protein BACCAP_02726 [Bacteroides capillosus ATCC
29799]
gi|150272275|gb|EDM99473.1| hypothetical protein BACCAP_02726 [Bacteroides capillosus ATCC
29799]
Length = 153
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E IR + + D W V KDV+ ALGY N +AI H +
Sbjct: 1 MNQMEIFKNPEFGAIRAV-EIDGEPWLVGKDVSLALGYTNPQKAIRDHVDAEDRTVNDSF 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ +I+E +Y L++ S LP A++F RWV EVLP++RK G+Y + ++
Sbjct: 60 TVNGTAITLINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRKHGAYMTKEKLWEVATS 119
Query: 120 STVL 123
L
Sbjct: 120 PEAL 123
>gi|210632120|ref|ZP_03297220.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM 13279]
gi|210159716|gb|EEA90687.1| hypothetical protein COLSTE_01114 [Collinsella stercoris DSM 13279]
Length = 251
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 78/246 (31%), Positives = 106/246 (43%), Gaps = 17/246 (6%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
S I PF E +RTI ++D + F KDVA ALGY N A+NAHCKG A R
Sbjct: 4 SDIIPFTSEQFGTVRTI-EEDGRVIFCGKDVAAALGYAKPNNALNAHCKGDALIRGITDN 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLR 115
G Q+ R I+E D+YRL+ S LPSAQ+FE WVF+EVLP++RK G Y E P+
Sbjct: 63 LGREQQARFITEGDLYRLIASSKLPSAQQFESWVFDEVLPSIRKRGGYMAAREDETPEQI 122
Query: 116 ATSA-----STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI--KHL 168
A T+ R + ++EL +A D V ++ + I L
Sbjct: 123 MARALMLAKDTMDRQKREIDELRPKALFADAVAASDGTCLVGELAKMLTQSGFQIGQNRL 182
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP--TPKGEERGGKM 226
+ +E R P QR +K ++ G T K +G
Sbjct: 183 FALLREEGYLGKSGSNRNVPIQRYVEQGLFRIKE-TAITHSDGHVTLTRTTKVTGKGQAY 241
Query: 227 CDVPMQ 232
Sbjct: 242 FMARYC 247
>gi|317163970|gb|ADV07511.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 108
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ N +RT+ D +WF+A DV LGY N ++ HCK GV KRY
Sbjct: 1 MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYT-P 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
T G Q++ I+EP++YRL++KS P+A+ FE WV E VLP +RKTG
Sbjct: 60 TASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGG 107
>gi|303234375|ref|ZP_07321014.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
gi|302494491|gb|EFL54258.1| BRO family, N-terminal domain protein [Finegoldia magna BVS033A4]
Length = 244
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 23/223 (10%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
S + FE ++ T+++KD +F+A +VAT LGY N +A+ H K T
Sbjct: 3 SNLKIFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GGIQ + II+E +Y L++ S LP A+ F+ WV EVLP+++K G Y +
Sbjct: 63 GGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIKKNGGYILG---------- 112
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+E L + +L+ + +++L + D
Sbjct: 113 ---------QEKKTNEELLADAILVANRIIAEREEEIEELRPKADYYDKLVDYKLLTNFR 163
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L PQ L+ +GL P + +G
Sbjct: 164 NTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLPY-ADKNKG 203
>gi|269119942|ref|YP_003308119.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
gi|268613820|gb|ACZ08188.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
Length = 236
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M + F+ E K+RT++ ++ +WFV D+ L N + I + ++ L +
Sbjct: 1 MDKLQIFQSKEFGKVRTVLIEN-EVWFVLIDICKILELSNPSSVIKRLDEDEVTKFDLGS 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE--APKLRAT 117
GI II+E +Y+++ +S P A +F +WV +VLP+LRKTGSYS+ +L
Sbjct: 60 LSGI--TNIINESGLYKVIFRSDKPQANQFTKWVTHDVLPSLRKTGSYSINQTPKELELK 117
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
L+ + L +A + + + +L N TK+ D L LP Y
Sbjct: 118 EKEIQLKTAEFLNNMADSILIPEYKQIL--NAHATKVLTGDFLLP-----LPVVGEITY- 169
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
+ T+IG+ LN A + +L K L+ + + K +
Sbjct: 170 SATEIGKMLNI--SANMVGRLTKKHNLRTEEYGKVFYDKSKYSSK 212
>gi|255652582|ref|ZP_05399484.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 347
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 22/234 (9%)
Query: 4 ITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
I F E +IRTI ++ +FVA D+A ALGY+++ AI HCK V K + +
Sbjct: 12 IISFNNELFGEIRTIRIEN-EPYFVATDIAKALGYKDTTNAIKQHCKWVVKHHIPHPQSK 70
Query: 63 IQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
+ +V II E D+YRL+ S LPSA+KFERWVF+EVLP++R+ G+Y +A
Sbjct: 71 TKTLEVNIIPEGDMYRLITNSELPSAEKFERWVFDEVLPSIREHGAYMTNEALEKAINDP 130
Query: 120 STVLRVHKHL-EELAKQAGLKDNQLLLK----------------VNRGVTKITGVDQLEA 162
+++ L +E A + LK Q K + ++KI + ++
Sbjct: 131 DWTIKLLTELKKERATKEKLKVEQEKNKPKIELANAIESSSSSILIAQLSKILNQNGVDI 190
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ N+EYL + + +P Q++ L L + + + K
Sbjct: 191 GQNRLFEWMRNNEYLIRKKRADHNSPTQKSMDLKVLEVSESVGIDKDGNTIVRY 244
>gi|260768856|ref|ZP_05877790.1| phage antirepressor protein [Vibrio furnissii CIP 102972]
gi|260616886|gb|EEX42071.1| phage antirepressor protein [Vibrio furnissii CIP 102972]
Length = 284
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 12/229 (5%)
Query: 3 TITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
++ F + +++ + D D WF+ +VA LGY+N +A+ H K T
Sbjct: 25 SLKVFTNAQFGELKVVTDVDCQPWFIGGEVAKTLGYKNPRDALAKHVDIEDKGVANHDTL 84
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q+V I+E +Y L+ S LP A+ F+RWV EVLP++RK G Y+ +L S
Sbjct: 85 GGEQEVTTINESGLYALIFSSKLPKAKAFKRWVTSEVLPSIRKHGGYTHGQSEL---SPE 141
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI--TGVDQLEAMDIKHLPSSDNDEYLT 178
++ + + A Q ++N L ++ TGV + ++ + +
Sbjct: 142 ELMAKALLVAQSAIQEKEQENARLSSAIEDLSAQLATGVTIPSFCMQLNGVNTQDVQSSL 201
Query: 179 IT---QIGERLN--PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
+ I ER P R + Q K S TPKG E
Sbjct: 202 ASIGVLIAERHGFRPSSAYRNTSFTCSSYEYQPGKRSYKTLVTPKGAEL 250
>gi|317496640|ref|ZP_07954986.1| BRO family domain-containing protein [Gemella moribillum M424]
gi|316913254|gb|EFV34754.1| BRO family domain-containing protein [Gemella moribillum M424]
Length = 243
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 22/220 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS++ FE T+++KD +F+ K+VA LGY N+ +A+ H K + +
Sbjct: 1 MSSLITFENMGFGKLTVMEKDGEFFFIGKEVAEKLGYANTRDALVRHVDTDDKADVVFHD 60
Query: 61 GG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + + I+E +Y L++ S LP A+ F+RW+ EVLP++RK G Y
Sbjct: 61 GRQRRNMVSINESGLYSLILSSKLPQAKDFKRWITTEVLPSIRKNGGYL----------- 109
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+E + N +LL + K ++ LE +N
Sbjct: 110 --------KNQEKMSNEEILANAVLLANHLIAEKEKIIEDLEPKAKYFDELVNNHLLTNF 161
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L+ PQ + + L+ + L P K
Sbjct: 162 RNTSKELHIPQ--KVFIQFLIDKELIYRDKKNRLLPYAKN 199
>gi|255957589|dbj|BAH96644.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957604|dbj|BAH96656.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 98/100 (98%), Positives = 98/100 (98%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY PTPKGEE
Sbjct: 1 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYIPTPKGEEY 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL
Sbjct: 61 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 100
>gi|319942313|ref|ZP_08016628.1| hypothetical protein HMPREF9464_01847 [Sutterella wadsworthensis
3_1_45B]
gi|319804186|gb|EFW01086.1| hypothetical protein HMPREF9464_01847 [Sutterella wadsworthensis
3_1_45B]
Length = 326
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
MS + F FE+NK+RT+ + F+A DV AL + N +A+ + + + ++T
Sbjct: 43 MSDVIAFSFENNKVRTLGTP-ETPLFIAADVCAALKHSNPRQALRDNVDPEDQIKVEIET 101
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q V ++E +Y L+ S L +A++F+RWV EVLPT+R+TG Y P+
Sbjct: 102 NGGRQTVNAVNESGLYALIFGSKLDTAKRFKRWVTSEVLPTIRRTGRYEAPKPEYITVEH 161
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
++ + + + LK + V K T +
Sbjct: 162 RWAIQKAVGRKARGQSVNYQTVYRALKDHFKVEKYTHI 199
>gi|307150458|ref|YP_003885842.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306980686|gb|ADN12567.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 230
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE+ +R + D+ W VA+DV T L + +++ + ++T
Sbjct: 1 MSDLIVFGFENQDVRFVGTPDKPEW-VAQDVCTVLEIKRTSDTLRNFDDDEKGTVTIRTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA---PKLRAT 117
GG Q+ ++EP +YRL+ KS A++F+RW+F EVLP+LR+TGSYS+ P
Sbjct: 60 GGEQEFLTVTEPGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSINQSKEPPKALI 119
Query: 118 SASTVLRVHKHLEELAKQAG 137
+A + +++ + +++ +
Sbjct: 120 AARAINEINELVVDISPRLA 139
>gi|25027384|ref|NP_737438.1| hypothetical protein CE0828 [Corynebacterium efficiens YS-314]
gi|259506475|ref|ZP_05749377.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23492665|dbj|BAC17638.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165895|gb|EEW50449.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 262
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 27/240 (11%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
IT F +++R + + W VA D+A LG +++ + + + ++T G
Sbjct: 2 ITLLNFHDHQVRVVQVAGEPQW-VAADIAAVLGLGRTHDMVRSLDEDERGAVTIRTPSGE 60
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSASTV 122
Q++ +I+E +Y +++S P A++F+RWV EVLP++R+ G Y + T T+
Sbjct: 61 QEMTVITESGLYSCILRSRKPEAKEFKRWVTREVLPSIRRHGGYLTDPKIEEILTDPDTI 120
Query: 123 LRVHKHLE-------ELAKQAGLKDNQLLLKVNRGVTKITGV----DQLEAMDIKHLPSS 171
+++ L+ EL + A + + V V ++ +
Sbjct: 121 IKLATDLKQERARRLELEQPARSWEQLADAAGDYSVATAAKVLSRDPSIKIGRDRLFAEM 180
Query: 172 DNDEYLTITQIGERLNP----PQRARFLNKLLLKRGLQVSKVS-GGYRP-------TPKG 219
+ ++ ++ R P ++A +L+ K G + TPKG
Sbjct: 181 ASAGWVFRSK--ARRGPWEASQKKAVDTGRLVHKLGRPFFNERTEEWEQPAPTIRVTPKG 238
>gi|307592430|ref|YP_003900021.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306986075|gb|ADN17955.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 288
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+++ F + +N+IR IV D WFVAKDV L + + + A + T GG
Sbjct: 6 SLSVFSYGNNQIR-IVLIDGEPWFVAKDVCNVLEHSDVSMACQRLKSYEKGTSIVCTPGG 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q++ IISE +YRL++ S P A+ F+ WV +EVLP++R+TG Y V+ P+ +A +
Sbjct: 65 NQEMAIISESGLYRLVLTSRKPQAEPFQDWVCQEVLPSIRQTGRYEVQPPQPKA-QGELI 123
Query: 123 LRVHKHLEELAKQAGLKDNQ 142
L + + E K+ + +
Sbjct: 124 LMLAQEAVERDKRINALEAE 143
>gi|291557181|emb|CBL34298.1| Prophage antirepressor [Eubacterium siraeum V10Sc8a]
Length = 262
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 22/226 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ I F+ E ++ +D N F A + A LGYE N AI+ HC+ KR +
Sbjct: 4 NKIILFKHEKFGEIGVIFEDGNPLFPATECAKILGYEKPNNAISRHCRYSLKRGVPHPQS 63
Query: 62 GIQKVR--IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
+ + I E D+YRL+++S LP AQ+FE WV + +LP+LRK G+Y + E +
Sbjct: 64 ANKTIEKLFIPEGDLYRLIMRSKLPEAQEFESWVCDRILPSLRKHGAYFTAETLHKTMSD 123
Query: 119 ASTVLRVHKHLE-ELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ ++ L E K L+ LL K D++ + +
Sbjct: 124 PRELAKLLNTLADEQEKCKKLEKENALLA-----GKANYYDRI----------LHSKNSV 168
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+TQI + A N++L G+Q V + + G
Sbjct: 169 PVTQIAKDYG--MTAIAFNRMLHDYGIQY-AVRNTWVLYAEYANLG 211
>gi|187735860|ref|YP_001877972.1| prophage antirepressor [Akkermansia muciniphila ATCC BAA-835]
gi|187425912|gb|ACD05191.1| prophage antirepressor [Akkermansia muciniphila ATCC BAA-835]
Length = 264
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 26/250 (10%)
Query: 2 STITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK---RYP 56
+ + PF+ E+ +R +V KD WFVAKDV AL N ++A++ +
Sbjct: 4 NGVVPFQNETLNCTVRAVV-KDGEPWFVAKDVCDALEIGNVSQAVSYLDEDEKSNIITND 62
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
+ GG + II+E +Y L+++S P A+KF++WV EVLP++RK G Y+ E +
Sbjct: 63 IAQNGGRAPL-IINESGLYSLILRSRKPEAKKFKKWVTAEVLPSIRKHGVYATGEKLEEM 121
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
T++ + L+ + K L K +E +
Sbjct: 122 LADPDTMILTLQALKAERE----KRKALEAKAAEDAPYAYFGRCVEVSE----------G 167
Query: 176 YLTITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM- 231
+ I + + L N+L L G+ + P + E G +
Sbjct: 168 CILIGEFAKILAQNGMETGQNRLFEYLRNEGIMGRHGNRHNVPAQEYIEAGYFRLTYRVI 227
Query: 232 QHVEGSTQQL 241
Q +GS Q
Sbjct: 228 QRSDGSQQSK 237
>gi|269215151|ref|ZP_05987828.2| KilA domain protein [Neisseria lactamica ATCC 23970]
gi|269208170|gb|EEZ74625.1| KilA domain protein [Neisseria lactamica ATCC 23970]
Length = 305
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y +
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQITPK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + + LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPAEKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|255103227|ref|ZP_05332204.1| prophage antirepressor [Clostridium difficile QCD-63q42]
Length = 347
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 22/234 (9%)
Query: 4 ITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
I F E +IRTI ++ +FVA D+A ALGY+++ AI HCK V K + +
Sbjct: 12 IISFNNELFGEIRTIRIEN-EPYFVATDIAKALGYKDTTNAIKQHCKWVVKHHIPHPQSK 70
Query: 63 IQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SA 119
+ +V II E D+YRL+ S LPSA+KFERWVF+EVLP++R+ G+Y +A
Sbjct: 71 TKTLEVNIIPEGDMYRLITNSELPSAEKFERWVFDEVLPSIREHGAYMTNEALEKAINDP 130
Query: 120 STVLRVHKHL-EELAKQAGLKDNQLLLK----------------VNRGVTKITGVDQLEA 162
+++ L +E A + LK Q K + ++KI + ++
Sbjct: 131 DWTIKLLTELKKERATKEKLKVEQEKNKPKLELANAIESSSSSILIAQLSKILNQNGVDI 190
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ N+EYL + + P Q++ L L + + K
Sbjct: 191 GQNRLFEWMRNNEYLIRKKRADHNTPTQKSMDLKVLEVSESTGIDKDGNTIVRY 244
>gi|307580159|gb|ADN64128.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 188
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ I PF+F S+ +R ++ +D N WFVA DVA ALGY ++ A AH KG +
Sbjct: 1 MTQSIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGYRDAANAARHVGAHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q + I+SE +YRL+++S A F WV +EVLP++RKTGSYS P +
Sbjct: 57 VSTIKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGSYSASHPPVVT 116
Query: 117 TSASTVLRVHKHLEELA 133
+ ++ L +A
Sbjct: 117 LTEEEAFNLYALLRMVA 133
>gi|28199008|ref|NP_779322.1| hypothetical protein PD1116 [Xylella fastidiosa Temecula1]
gi|182681723|ref|YP_001829883.1| prophage antirepressor [Xylella fastidiosa M23]
gi|28057106|gb|AAO28971.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631833|gb|ACB92609.1| prophage antirepressor [Xylella fastidiosa M23]
Length = 188
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ +I PF+F S+ +R ++ +D N WFVA DVA ALGY ++ A AH KG +
Sbjct: 1 MTRSIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGYRDAANAARHVGAHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q + I+SE +YRL+++S A F WV +EVLP++RKTGSYS P +
Sbjct: 57 VSTIKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGSYSASHPPVVT 116
Query: 117 TSASTVLRVHKHLEELA 133
+ ++ L +A
Sbjct: 117 LTEEEAFNLYALLRMVA 133
>gi|296112028|ref|YP_003622410.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
gi|295833560|gb|ADG41441.1| putative antirepressor - phage associated [Leuconostoc kimchii
IMSNU 11154]
Length = 234
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 4/131 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + F FE+N++RT+V ++ +W VAKDVAT LGY + +A+ AH K ++T
Sbjct: 1 MNEVAVFNFETNEVRTVV-INEEVWLVAKDVATTLGYSRTADAVKAHVDEEDKGVGKIQT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q++ +I++ V L + S LP+A+KF+RWV EV+P++ K GSYS P+
Sbjct: 60 PGGTQRMTVINQSGVISLALSSKLPTAKKFKRWVTSEVIPSVLKHGSYS--KPQSTLQLF 117
Query: 120 STVLRVHKHLE 130
L+V K E
Sbjct: 118 DNALQVMKEQE 128
>gi|255652579|ref|ZP_05399481.1| antirepressor, phage associated protein [Clostridium difficile
QCD-37x79]
Length = 248
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 3/121 (2%)
Query: 1 MSTITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F + +IRTI + D +WFV KDVA ALGY N+ EA+ H +
Sbjct: 2 MNNLQIFKNNDFGEIRTI-EIDNEVWFVGKDVAIALGYANTREALKTHIDSEDIADVVIH 60
Query: 60 EG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+G + ++I +E +Y L+ S LP+A+KF+ WV +EVLP++RKTGSY + + R
Sbjct: 61 DGSQNRNMKITNESGLYSLIFGSKLPTAKKFKNWVTKEVLPSIRKTGSYDINNLEERVAP 120
Query: 119 A 119
Sbjct: 121 M 121
>gi|85059070|ref|YP_454772.1| hypothetical protein SG1092 [Sodalis glossinidius str. 'morsitans']
gi|84779590|dbj|BAE74367.1| hypothetical phage protein [Sodalis glossinidius str. 'morsitans']
Length = 259
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-- 60
+I PF FE +++RT + WFV DV +ALG N+ +A++ L
Sbjct: 5 SIVPFTFEKHEVRT-TILNGEPWFVGIDVCSALGISNNRDALSKLDDDEKTTVALTDSQP 63
Query: 61 -GGIQKVRIISEPDVYRLLVKSTLPSA-----QKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G Q++ +ISEP ++ L+++ +F +WV E+LP++RKTG Y K
Sbjct: 64 GTGAQRISLISEPSMFTLVLRCRDAVKQGTLPHRFRKWVTSEILPSIRKTGKYEHPVYKP 123
Query: 115 RAT------SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
+ S + R+ H+ + N + + ++TG+ + M+++H+
Sbjct: 124 ESHELFTTNDTSNLARLIWHMSHNFRFKQAWSNGIWY----ALREVTGIPSPQPMEVRHI 179
Query: 169 PSSDNDE---YLTITQIGERLNPPQRARFLNKLLLKR 202
P + + I ++ + +R R + +L+ KR
Sbjct: 180 PHIARECERIWAVIERLQSAMVEAER-RTIRQLVRKR 215
>gi|19746241|ref|NP_607377.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
gi|19748427|gb|AAL97876.1| putative antirepressor [Streptococcus pyogenes MGAS8232]
Length = 247
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 14/218 (6%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ F E ++RT D + +F KD L +NS + + L T G
Sbjct: 2 ELQVFTNEQFGEVRT-ADINGESFFNLKDCCKILEIKNSKDVVKRLNPKGVVTTDLLTNG 60
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAS 120
G Q+ I+E + Y+L+ +S P A+KF WV EVLP++RK G+Y E +A TS
Sbjct: 61 GTQQANFINESNFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSPD 120
Query: 121 TVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
++R+ L EE + L+ + +L V V K D + +
Sbjct: 121 FLIRLANELKEEKERSRQLEAEKSILSVENMVMK--------PKADYFDDLVDRNLLTSF 172
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ ++L + R + LL + G P
Sbjct: 173 RETAKQLKVKE--RRFIQFLLDKKYVYRDKKGKLMPFA 208
>gi|169334316|ref|ZP_02861509.1| hypothetical protein ANASTE_00714 [Anaerofustis stercorihominis DSM
17244]
gi|169259033|gb|EDS72999.1| hypothetical protein ANASTE_00714 [Anaerofustis stercorihominis DSM
17244]
Length = 240
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 22/225 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I FE E ++R + + +I+F KDV AL N+ N + L
Sbjct: 1 MNEIKIFENSEFGRVR-VELINNDIYFCLKDVCEALSITNTTMVANRLDVDEVTKLDLGG 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
+ G ++E +Y ++++S P+AQKF +WV E+LP +RK G+Y + +A S
Sbjct: 60 KSGS--TNFVNESGLYSVILRSDKPNAQKFRKWVTSEILPNIRKHGAYMTDETLEKALLS 117
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++++ L+E K L V+ + K + +
Sbjct: 118 PDFLIQLANQLKEA------KALNSKLAVDNQIMK--------PKADYFDELVERNTLTN 163
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
T+ + L + + L L+ + G P +G
Sbjct: 164 FTETAKELGIKR--KVLINFLINKKYIYRDKKGKILPYE-SRNKG 205
>gi|240116004|ref|ZP_04730066.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|268601671|ref|ZP_06135838.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268585802|gb|EEZ50478.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 289
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + ++ LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEGIPVEKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|291563344|emb|CBL42160.1| Uncharacterized phage-encoded protein [butyrate-producing bacterium
SS3/4]
Length = 252
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 27/269 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + F E KIRTI + + F A D+A +LGY N N+A+N HC+ + K
Sbjct: 1 MSELQIFSNPEFGKIRTIQ-QGEKTLFCASDIARSLGYSNPNKAVNDHCRAITK-CSTPI 58
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G +Q + I E DVYRL+V S LPSA+KFE WVF+ VLP++RK G Y L
Sbjct: 59 SGKMQDINFIPEGDVYRLIVHSKLPSAEKFEHWVFDTVLPSIRKNGGYISGQETLSD--- 115
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGVDQLEAMDIKHLPSSDNDEYLT 178
EL +A L + + + NR + + ++ I S + +
Sbjct: 116 ----------AELMAKAVLVAQRTIDEKNRVIEQQRQKIEADRPKTIFADAVSTSKSSIL 165
Query: 179 ITQIGERL---NPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
I + + + + L + + G + S P + ++G + ++ +V+
Sbjct: 166 IGDLAKLICQNGYQIGQKRLFQWMRDNGYLMKTGSSYNMPMQRYVQQG--LFEIKESNVQ 223
Query: 236 GSTQQLKWNSNLLVS-----FLQNELINT 259
++ VS + N+ + T
Sbjct: 224 NPDGSIRITRTTKVSGKGQLYFVNKFLGT 252
>gi|281422299|ref|ZP_06253298.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281403620|gb|EFB34300.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 335
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 45/260 (17%)
Query: 6 PFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-------KGVAKRYPL 57
FE E KIRT+ D++ F AKD+ LGY+ S A+N +GV L
Sbjct: 21 VFENPEFGKIRTLTDENGEPLFCAKDLCDILGYKKSRNAVNQLVNHLDALKQGVKVSGSL 80
Query: 58 KTEG----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV---- 109
+ +G Q++ ++E Y L++ S L +A KF+ WV +VLP +RKTG Y
Sbjct: 81 RKDGTPSKRRQQMIFVNESGFYALVLGSKLSTAVKFKNWVTADVLPQIRKTGGYIPVQPG 140
Query: 110 EAPKLRATSASTVLRV-HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD---------- 158
E+ + A +LR K E L K+ L+ Q + T+I ++
Sbjct: 141 ESDEETIRHAEEILRATLKEKENLLKKQRLQIEQQKKLIGEQDTEIRRLNDVVDEQVVRI 200
Query: 159 --------QLEAMDIKHLPSS-------DNDEYLTITQIGERLNPPQRARFLNKLLLKRG 203
QLE LP + D+ T TQI + L A+ LN+ L
Sbjct: 201 AKSGDNIIQLENQVGNLLPKALYSDNVLDSVSCFTTTQIAKELGIT--AQELNRSLCALH 258
Query: 204 LQVSKVSGGYRPTPKGEERG 223
+Q + SG Y G
Sbjct: 259 IQYYQ-SGQYLLYADYAHMG 277
>gi|46402113|ref|YP_006607.1| Gp27 [Klebsiella phage phiKO2]
gi|40218257|gb|AAR83043.1| Gp27 [Klebsiella phage phiKO2]
Length = 260
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ ++ F F E++ +R ++ + WFVAKD+ AL NS +A+++ L
Sbjct: 1 MNALSVFSFQENHPVRVVLV-NGEPWFVAKDICDALKLVNSRKALSSLDDDEKNTVTLSD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G + IISE +Y L+++ +A +F +WV EVLP +RK+G YS P
Sbjct: 60 GNRGNPNMSIISESGLYTLILRCRDAVKQGTTAWRFRKWVTNEVLPAIRKSGEYSYVEPA 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGLK---DNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
++ R + L L N V + + + + LP+
Sbjct: 120 PKSAGEPLDWRQKEELRGLINDIAQSFRYHNAWKSGVWLALRRACRNPSPNPITVDDLPA 179
>gi|317487090|ref|ZP_07945897.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316921662|gb|EFV42941.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 272
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 25/249 (10%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M FE E K+R +++ + WFVA DVA ALGYE +A+N HCK K
Sbjct: 1 MEMPQIFENKEFGKVR-VMEYNGAPWFVASDVAKALGYERPADAVNIHCKKANKITQYCD 59
Query: 56 -PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
P + + + II E DVYRL+++S LP A++F+ WV EEVLP +RKTG Y +
Sbjct: 60 SPDRVKTPPINLNIIPESDVYRLVMRSNLPGAERFQDWVVEEVLPAIRKTGGYGTPQTEN 119
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
S + + ++ LL + + + +D + + + + +
Sbjct: 120 EILSRAITIAANRI-------------GLLSQEVAMLQEQIALDAPKVELAEAI--METE 164
Query: 175 EYLTITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
E +++ Q + L N+L L K G + + + + G V
Sbjct: 165 ECVSVNQFAKILKQNGLDIGANRLYRDLRKDGYLIRRKGVNWNMPKQRMMDKGYFRVVER 224
Query: 232 QHVEGSTQQ 240
Q
Sbjct: 225 STDTEDDYQ 233
>gi|229188001|ref|ZP_04315096.1| Antirepressor, phage associated [Bacillus cereus BGSC 6E1]
gi|228595481|gb|EEK53206.1| Antirepressor, phage associated [Bacillus cereus BGSC 6E1]
Length = 262
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 21/262 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F I+ K+ +F A DVA ALGY N ++AI HCK + T
Sbjct: 7 MNKLEKFSHNMFGNLEILIKEGKEFFPATDVAKALGYSNPHKAIKDHCKPEGVNESLVPT 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
GIQ + I+EP++YRL+VKS LP A++FE+WVFEEVLP++RK G+Y + +A T+
Sbjct: 67 NSGIQTKKFINEPNLYRLIVKSKLPQAEQFEKWVFEEVLPSIRKHGAYMTDQVLEQAITN 126
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + L+E ++ ++ + +T + D +
Sbjct: 127 PEFAIGILTKLKEEKEKL----AAAQQQIVQQQPLVTFAEACMQSD-------QTLKVGE 175
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG--EERGGKMCDVPMQHVEG 236
+ ++ + + L L + GL + PT KG E V +
Sbjct: 176 VAKLAMKQGVKIGQKRLFDKLREWGLLFKNST---EPTQKGCERELFEVSQGVKKKPNGE 232
Query: 237 STQQLKWNSNLLVSFLQNELIN 258
+ W + + Q +I+
Sbjct: 233 A---FTWTTTYVTPKGQAYIID 251
>gi|306827221|ref|ZP_07460509.1| prophage pi1 protein 08 [Streptococcus pyogenes ATCC 10782]
gi|304430578|gb|EFM33599.1| prophage pi1 protein 08 [Streptococcus pyogenes ATCC 10782]
Length = 247
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 14/218 (6%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ F E ++RT D + +F KD L +NS + + L T G
Sbjct: 2 ELQVFTNEQFGEVRT-ADINGESFFNLKDCCKILEIKNSKDVVKRLNPKGVVTTDLLTNG 60
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSAS 120
G Q+ I+E + Y+L+ +S P A+KF WV EVLP++RK G+Y E +A TS
Sbjct: 61 GTQQANFINESNFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSPD 120
Query: 121 TVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
++R+ L EE + L+ + +L V V K D + +
Sbjct: 121 FLIRLANELKEEKERSRQLEAEKSILSVENMVMK--------PKADYFDDLVDRNLLTSF 172
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ ++L + R + LL + G P
Sbjct: 173 RETAKQLKVKE--RRFIQFLLDKKYVYRDKKGKLMPFA 208
>gi|325297699|ref|YP_004257616.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
gi|324317252|gb|ADY35143.1| prophage antirepressor [Bacteroides salanitronis DSM 18170]
Length = 249
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 91/249 (36%), Gaps = 35/249 (14%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAH----CKGVAKRYPL--KTE 60
E +IRT+ D+ WF DV L + + +GV+ T
Sbjct: 10 EFGEIRTMTDEQGEPWFCLADVCRILEIKRVSVCKSRLKRDGVCLAEGVSNTTNQYGATT 69
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G + I+E ++Y+++++S P A+ F+ WV EVLP +RK G Y +RA
Sbjct: 70 GQKLMLTFINEQNLYKVIMRSDKPQAEGFQDWVCGEVLPAIRKHGGYM----AVRADEPD 125
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
V+ LL+ + + +LE D+ +T T
Sbjct: 126 EVI---------------LSRALLIMQKALERRDKRIAELEPRAAYADEVIDSVSCMTTT 170
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV----EG 236
Q+ + L A LN+ L + G+Q + SG Y +G M
Sbjct: 171 QVAKGLG--MTAIELNRRLCRLGIQYCQ-SGQYLLYAGYARQGYAQNRTYMYRDAEGETH 227
Query: 237 STQQLKWNS 245
+ L W
Sbjct: 228 TRAYLVWTE 236
>gi|194099000|ref|YP_002002067.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|240123852|ref|ZP_04736808.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
gi|268682476|ref|ZP_06149338.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|193934290|gb|ACF30114.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|268622760|gb|EEZ55160.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 289
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + ++ LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPVEKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|240013813|ref|ZP_04720726.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
gi|240121386|ref|ZP_04734348.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
Length = 289
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + ++ LP +
Sbjct: 121 ----TTADDRTGLRRAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPVEKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|209552444|ref|YP_002284359.1| hypothetical protein PAJU2_gp25 [Pseudomonas phage PAJU2]
gi|209528717|dbj|BAG75009.1| hypothetical protein [Pseudomonas phage PAJU2]
Length = 286
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ PF+F++ ++RT++ DQ WFVA DVA +LGY + + + + T GG
Sbjct: 6 VIPFQFDAREVRTMLIDDQ-PWFVATDVAASLGYPAAPQMTRNLDEDEKGMQNVHTPGGD 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
Q++ +I+E +Y +++S A++F++WV EVLP +RK G Y + K+ T+
Sbjct: 65 QEMLVINESGLYSAILRSRKAEAKRFKKWVTAEVLPAIRKHGRYEDSSNKMATLVGETIG 124
Query: 124 RVHKHL------EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
H+ ++A + K+ GV + L ++ N
Sbjct: 125 TDGFHMLGSLIKGKVAALPVEVRRRATAKIWSQTHAAFGVRSATDIPANQLDAARN 180
>gi|270598466|ref|ZP_06221528.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270318313|gb|EFA29482.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 194
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE- 60
S ++ F FESN IRT+V + WFVAKDV L N ++A+ L
Sbjct: 5 SQLSTFNFESNSIRTLVINN-EPWFVAKDVCDTLKISNVSDALLKLDDDEKATIGLTDSQ 63
Query: 61 --GGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPK 113
G Q + IISE +Y L+++ + +F +WV EVLP +RKTG Y +
Sbjct: 64 AGNGAQSISIISESGMYTLILRCRDAVKKGSIPHRFRKWVTAEVLPAIRKTGKYESK--- 120
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T+ + + L + GL + + V + V+ +E + ++ LP +
Sbjct: 121 ---TTVDDRTGLRNAVNMLVSKKGL----IYSEAYHLVHQRFNVESIEDLTLEQLPQAVE 173
Query: 174 DEYLTITQIGERLNPPQRARFL 195
+ I GE + P++
Sbjct: 174 YVH-RIVLEGELITTPKKDECF 194
>gi|295100755|emb|CBK98300.1| Prophage antirepressor [Faecalibacterium prausnitzii L2-6]
Length = 229
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E ++RT+ + + W V KDVA ALGY+N +AI AH KR+ + +
Sbjct: 1 MNDLQIFSNPEFGQVRTV-ELNGQPWLVGKDVAEALGYKNPGKAIIAHVDEEDKRFEMLS 59
Query: 60 EGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+G + + +I+E +Y L++ S +P A+ F+ WV EVLP LRK G Y
Sbjct: 60 QGADSQNGNVSPSSKIALINESGLYSLILSSKMPKAKAFKHWVTSEVLPALRKNGVYETV 119
Query: 111 AP-----KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
+L AT+ + + A + D + + R K+T ++
Sbjct: 120 KAQQHIEQLEATNERLTAAIKTVSTAKEQLAEVIDTRNDMLKQRDDFKVTFLE 172
>gi|281422525|ref|ZP_06253524.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281403447|gb|EFB34127.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 288
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 107/257 (41%), Gaps = 45/257 (17%)
Query: 6 PFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-------KGVAKRYPL 57
FE E KIRT+ D++ F AKD+ LGY+ S A+N +GV L
Sbjct: 21 VFENPEFGKIRTLTDENGEPLFCAKDLCDILGYKKSRNAVNQLVNHLDALKQGVKVSGSL 80
Query: 58 KTEG----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV---- 109
+ +G Q++ ++E Y L++ S L +A KF+ WV +VLP +RKTG Y
Sbjct: 81 RKDGSRTVRTQQMIFVNESGFYALVLGSKLSTAVKFKNWVTADVLPQIRKTGGYIPVQPG 140
Query: 110 EAPKLRATSASTVLRV-HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD---------- 158
E+ + A +LR K E L K+ L+ Q + T+I ++
Sbjct: 141 ESDEETIRHAEEILRATLKEKENLLKKQRLQIEQQKKLIGEQDTEIRRLNDVVDEQVVRI 200
Query: 159 --------QLEAMDIKHLPSS-------DNDEYLTITQIGERLNPPQRARFLNKLLLKRG 203
QLE LP + D+ T TQI + L A+ LN+ L
Sbjct: 201 AKSGDNIIQLENQVGNLLPKALYSDNVLDSVSCFTTTQIAKELGIT--AQELNRSLCALH 258
Query: 204 LQVSKVSGGYRPTPKGE 220
+Q + SG Y
Sbjct: 259 IQYYQ-SGQYLLYADYA 274
>gi|71901481|ref|ZP_00683568.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71728737|gb|EAO30881.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 188
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ +I PF+F S+ +R ++ +D N WFVA DVA ALGY ++ A AH KG +
Sbjct: 1 MTRSIIPFDFHSHSVRVVM-RDGNPWFVATDVAVALGYRDAANAARHVGAHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q + I+SE +YRL+++S A F WV +EVLP++RKTG YS P
Sbjct: 57 VSTIKGNQSLTIVSEGGLYRLVLRSRRTEAVAFSDWVTDEVLPSIRKTGGYSASHPPAVT 116
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ ++ L + + + + + + L ++ ND +
Sbjct: 117 LTEVEAFNLYALLRMVVGHLSRERIEPIAQALHLMRS-------------PLSAAVNDLW 163
Query: 177 LTITQIGERLNP 188
L + +R+
Sbjct: 164 LEVVPRAKRMGD 175
>gi|211731852|gb|ACJ10151.1| conserved hypothetical protein [Bacteriophage APSE-4]
Length = 255
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNE-AINAHCKGVAKRYPLKT 59
S F F E++ +R I + WF +++ L EN + K ++ T
Sbjct: 4 SQTISFSFQETHDVR-IKIINSEPWFCLRNICEVLNIENHRDLMAKQLDKKGVEKIYTPT 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+GG Q + ++EP++YR++ +S P A++F+ WVF +VLP++RKTG Y P+ + +
Sbjct: 63 KGGNQLLTFVNEPNLYRVIFRSNKPEAKQFQDWVFNDVLPSIRKTGKYDHPQPQTQPKAV 122
Query: 120 STV----LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
R HL + V + ++TG E I+H+P ++
Sbjct: 123 ERFTHSDTRNLTHLVWCMTNGFRFEQSWTRAVWLALREVTGTPSPERFQIEHIPLMADEC 182
Query: 176 Y--LTITQIGERLNPPQRARFLNKLLLKR 202
IT+ ++ + + +LL KR
Sbjct: 183 RRIYYITETLRQIINEAEKQTIKRLLRKR 211
>gi|196037168|ref|ZP_03104483.1| antirepressor, phage associated [Bacillus cereus W]
gi|195990272|gb|EDX54325.1| antirepressor, phage associated [Bacillus cereus W]
Length = 256
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M + F I+ KD +F A DVA ALGY N ++AI HCK + T
Sbjct: 1 MDELKKFSHSMFGNLGILIKDGKEYFPATDVAKALGYSNPHKAIKDHCKSEGVNETIVPT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G Q+ + I+E ++YRL+VKS LP A++FE+WVFEEVLPT+RK G+Y E +A T
Sbjct: 61 NSGKQRKKFINESNLYRLIVKSKLPQAEQFEKWVFEEVLPTIRKHGAYMTEQALEKAVTD 120
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++ + L+E + K+ +I L + S+++ +
Sbjct: 121 PDFMIGLLIKLKEERE-----------KLAVAQQQIVQQQPLVIFAEACMQSNESLKVSE 169
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ ++ + N R L L + L + + PT E+G
Sbjct: 170 VAKLAAKHNIKIGQRQLFAKLREWNLMFKRST---EPTQSAVEKG 211
>gi|294341350|emb|CAZ89766.1| putative Prophage antirepressor [Thiomonas sp. 3As]
Length = 413
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEG 61
I F F +R + D+ FV KDV ALGY + AI H +GV KR+P+ + G
Sbjct: 183 QIIHFAFGGKTVRAVHDESGEPCFVGKDVCDALGYADHINAIKQHSRGVVKRHPIIDSLG 242
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
Q+VR++SEPDV RL+V S LP+A+ FER VFEE+LPT+RKTG YS E A
Sbjct: 243 RTQEVRVLSEPDVMRLIVSSKLPAAEAFERLVFEEILPTIRKTGRYSAEKEAPPALGPIQ 302
Query: 122 VLRVHKHLEELAKQAG 137
+ L+ A
Sbjct: 303 APGTQEKLQGAMDVAR 318
Score = 88.9 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKTEGG 62
I +FE N I + +D ++W+ AK + TALG++ EAI H K G + + T GG
Sbjct: 10 IIRLDFEGNPILVQMGEDGSVWYTAKPLCTALGFKKMAEAIERHVKLGDQQSRGVPTGGG 69
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+Q++ ++E + L+ S + ++F++W+ V+
Sbjct: 70 VQQMMHVNEAGMQALVAASHRVATRRFKKWIAAGVI 105
>gi|157310914|ref|YP_001468910.1| putative antirepressor [Corynebacterium phage P1201]
gi|95832062|gb|ABF57462.1| putative antirepressor [Corynebacterium phage P1201]
Length = 307
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 9/227 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT-- 59
+ F+F+ +++RT+ ++ WFV DV L + + R +
Sbjct: 42 NAPQLFDFKGSEVRTMT-QNGEPWFVLADVCKVLEISQPHRVAARLNQADVTRSTVTITQ 100
Query: 60 ---EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
E + + +SE +Y +++ S P A++F RW+ EV+P++RK G+Y E +
Sbjct: 101 VNGESATKSMNYVSESGLYDVILDSRKPEAKEFRRWITSEVIPSIRKHGAYLTSEKIEEV 160
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ ++++ + L+ + + +L L+ ++ E
Sbjct: 161 LLNPDAIIQIAQSLKAEQQARLEAEKKLKLEAEARKVAQEQIEADRPKVDAFDALIAKGE 220
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
+ +G+ L Q F + L + +SK P K +
Sbjct: 221 SEMVGTVGKTLGIGQNKLF--QFLRDEDILISKGQRKNIPYQKYAKY 265
>gi|118445202|ref|YP_891171.1| antirepressor, phage associated [Bacillus thuringiensis str. Al
Hakam]
gi|118419763|gb|ABK88181.1| antirepressor, phage associated [Bacillus thuringiensis str. Al
Hakam]
Length = 262
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F I+ K+ +F A DVA LGY N ++AI HCK + T
Sbjct: 7 MNEVKIFSHNMFGNLGILIKEGKEFFPATDVAKVLGYSNPHKAIKDHCKPEGVNETLVPT 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G+Q + I+EP++YRL+VKS LP A++FE WVFEEVLP++RK G+Y + +A T+
Sbjct: 67 NSGVQTKKFINEPNLYRLIVKSKLPQAEQFETWVFEEVLPSIRKHGAYMTDQVLEQAVTN 126
Query: 119 ASTVLRVHKHLEELAKQ 135
+ + L+E ++
Sbjct: 127 PDFAIGLLTKLKEEKEK 143
>gi|282850924|ref|ZP_06260298.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
gasseri 224-1]
gi|282557876|gb|EFB63464.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
gasseri 224-1]
Length = 241
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ + F+FE ++RT ++ + WFV KD+ LGY+N + IN+H K RY + T
Sbjct: 3 NNLQLFKFEGKEVRT-LEVNGTPWFVGKDLTNILGYKNGSRDINSHVDEEDKLRYQISTA 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G +++ +++E ++ L++ S LPSA+KF+ WV EVLP +RKTGSY + P+
Sbjct: 62 GQMREQILVNESGMFSLILSSQLPSAKKFKHWVTSEVLPAIRKTGSYQL--PQTPEERLK 119
Query: 121 TVLRVHKHLEELAKQ 135
+ HL+E
Sbjct: 120 LAMEATIHLDERMTN 134
>gi|317164559|gb|ADV08100.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 289
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + V++ V+ +E + LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMVHQRF----NVESVEGIPAGKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|228994920|ref|ZP_04154698.1| Antirepressor, phage associated [Bacillus pseudomycoides DSM 12442]
gi|228764822|gb|EEM13598.1| Antirepressor, phage associated [Bacillus pseudomycoides DSM 12442]
Length = 247
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 28/245 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKTEGGIQKVRIISEPDVY 75
I+ KD +F A DVA ALGY N ++AI HCK + T G Q+ + I+E ++Y
Sbjct: 7 ILIKDGKEYFPATDVAKALGYSNPHKAIKDHCKSEGVNETLVPTNSGRQRKKFINESNLY 66
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR-ATSASTVLRVHKHLEE--- 131
RL+VKS LP A +FE+WV EEVLPT+RK G Y + + T+ ++ + +L+E
Sbjct: 67 RLIVKSKLPQADQFEKWVIEEVLPTIRKHGVYMTDQVLEQVVTNPDFMIGLLTNLKEEKE 126
Query: 132 -----------------LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
A+ + N + +K + K G++ + + L +
Sbjct: 127 RRFEAERKVLQQQPLVTFAQAVQVSTNLISIKQLAILMKQKGIETGQNRLFEWLRENGYL 186
Query: 175 EYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRP-TPKGEERGGKMCDVPMQ 232
+ G N P Q A L + ++ + TPK +G
Sbjct: 187 C----KKRGSMYNTPTQYAMDLGLFESQEFVRTNSEGEFVTSFTPKVTGKGQFYFINKFL 242
Query: 233 HVEGS 237
+ E
Sbjct: 243 NQEAI 247
>gi|261227201|ref|ZP_05941482.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. FRIK2000]
gi|261258792|ref|ZP_05951325.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. FRIK966]
Length = 188
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ T F+F ++IR +++K WFVAKDV AL NS +A+ A T G
Sbjct: 9 NDFTIFKFGDSEIR-VINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + I+SE +Y L+++ + KF +WV EVLP++RK G Y K +
Sbjct: 68 GEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYV----KGKK 123
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T+ + + L + GL+++ V++ G+D ++ + I+ +P +
Sbjct: 124 TTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRF----GIDSIDELSIEQIPLAVE 176
>gi|329113875|ref|ZP_08242646.1| Hypothetical protein APO_0652 [Acetobacter pomorum DM001]
gi|326696885|gb|EGE48555.1| Hypothetical protein APO_0652 [Acetobacter pomorum DM001]
Length = 236
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 1 MS-TITP--FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
M+ + P F+FE + +RTI ++D W+V D+ L + ++A + R +
Sbjct: 1 MNTALMPLAFDFEGHAVRTI-NRDGEPWWVLVDLCAVLELGSPHKAADRLDDDEKGRTII 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T GG Q++ +I+E ++ L++ S P+A++F++WV VLP+LR+TGS+SVEA L +
Sbjct: 60 PTLGGPQEMTVINESGLFSLILTSRKPAAKRFKKWVTAVVLPSLRRTGSFSVEAAILASQ 119
Query: 118 SASTVL 123
+A VL
Sbjct: 120 NAVKVL 125
>gi|227499686|ref|ZP_03929789.1| antirepressor [Anaerococcus tetradius ATCC 35098]
gi|227218283|gb|EEI83542.1| antirepressor [Anaerococcus tetradius ATCC 35098]
Length = 259
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 14/239 (5%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK 58
M + F+ E ++RT + D +F DV L N + GV +
Sbjct: 1 MKDLKIFDNEEFGQVRTSIIDD-EPYFALNDVCRVLEIANPRNVKARLNGDGVHTMDGVD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
+ G V +ISE ++Y+L+ +S P A++F WV EVLP++RK G+Y + R T
Sbjct: 60 SLGRRTDVTMISESNLYKLVFQSRKPEAERFADWVTSEVLPSIRKHGAYMTDGVIERTLT 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM----DIKHLPSSDN 173
++ + +L+E + L + Q+ R K+ D + A + L +
Sbjct: 120 DPDYLIMLATNLKEEKAKRALAEAQI----ERNKPKVLFADTVSASSRSCLMGELAKMIS 175
Query: 174 DEYLTITQIGERLNPPQ--RARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
E + +I E++ + N L K G + ++ Y E + G D
Sbjct: 176 QEAIRQGRINEKIGQNKLFSWMRNNGYLCKSGERKNQPLQQYVEQGLFEMKKGSYVDSK 234
>gi|260588388|ref|ZP_05854301.1| toxin-antitoxin system, toxin component, Bro family [Blautia
hansenii DSM 20583]
gi|260541262|gb|EEX21831.1| toxin-antitoxin system, toxin component, Bro family [Blautia
hansenii DSM 20583]
Length = 219
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGVAK-RY 55
MS + FE E ++R IV D WFV KDVA ALGY N AI H K
Sbjct: 1 MSELKIFENKEFGQVR-IVMIDGEPWFVGKDVARALGYGEGKSLNNAIANHVDDEDKGVT 59
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ T GG Q + II+E +Y L+ S L SA++F+ WV EVLP++ KTG Y
Sbjct: 60 EMMTPGGKQNMTIINESGLYALIFGSKLKSAKEFKHWVTSEVLPSVHKTGKYEANK 115
>gi|294674626|ref|YP_003575242.1| putative antirepressor [Prevotella ruminicola 23]
gi|294472209|gb|ADE81598.1| putative antirepressor [Prevotella ruminicola 23]
Length = 232
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
+ I F E +IRT +Q I FVAKDVATALGY N+ +AI H K
Sbjct: 3 TAIQIFTSEIFGEIRTCQVNNQ-IMFVAKDVATALGYTNTPKAIRDHIDDDDKLTERFVL 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G ++ V II+E +Y L++ S LP A+ F+ WV EVLP +R+TG Y +
Sbjct: 62 SGQVRSVIIINESGLYALILSSKLPQAKAFKHWVTSEVLPQIRQTGGY-IPTRAADGRDL 120
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
S V +H+ D + ++ L D LT
Sbjct: 121 SAVEILHR-----------------------------ADAIVGNTLRMLNEPAEDT-LTA 150
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
TQ+ + N N +L G+Q + G +
Sbjct: 151 TQVAKTFNMTTYD--FNAILRDMGIQYRR-DGHW 181
>gi|319411146|emb|CBY91551.1| Uncharacterized protein HI1418 [Neisseria meningitidis WUE 2594]
Length = 280
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F F N I+ +++K+ WF+A +VA LGY +S + + T
Sbjct: 1 MNQVQYFNFNQNAIQ-VINKNGEAWFIASEVAAMLGYRDSYNMTRILDNDEKGTHNVSTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q V +I+E Y KS P + F +WV EVLPT+RKTG Y + T+
Sbjct: 60 GGNQDVSVINESGFYHAAFKSRKPEVKPFRKWVTSEVLPTIRKTGGYQIGQK----TTVD 115
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + + L + G+ + +++ V+ +E + + LP + Y+
Sbjct: 116 DRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDISTEKLPEAV--AYVHAL 169
Query: 181 QIGERLNPPQRARF 194
+ L R
Sbjct: 170 TLHTGLTGEVLDRE 183
>gi|240113249|ref|ZP_04727739.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
gi|268599329|ref|ZP_06133496.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583460|gb|EEZ48136.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 289
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVESVEGIPAGKLPEAV 172
Query: 173 NDEYLTITQIGERL 186
Y+ + L
Sbjct: 173 --AYVHALTLHTGL 184
>gi|273810441|ref|YP_003344912.1| Bro-N family protein [Xylella phage Xfas53]
gi|257097816|gb|ACV41122.1| Bro-N family protein [Xylella phage Xfas53]
Length = 188
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ +I PF+F S+ +R ++ +D N WFVA DVA ALGY ++ A AH KG +
Sbjct: 1 MTRSIIPFDFHSHVVRVVM-RDGNPWFVATDVAVALGYRDAANAARHVGAHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q + I+SE +YRL+++S A F WV +EVLP++RKTG YS P
Sbjct: 57 VSTIKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPSIRKTGGYSASHPPAVT 116
Query: 117 TSASTVLRVHKHLEELA 133
+ ++ L +A
Sbjct: 117 LTEVEAFNLYALLRMVA 133
>gi|196042528|ref|ZP_03109769.1| antirepressor, phage associated [Bacillus cereus NVH0597-99]
gi|196026685|gb|EDX65351.1| antirepressor, phage associated [Bacillus cereus NVH0597-99]
Length = 257
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 28/255 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F + I+ KD +F A VA LGY N+ EAI HCK + + T
Sbjct: 1 MNQLQNFSHGTFGKLEILMKDGKEYFPATYVANLLGYANATEAIKRHCKNEGVAFHEVPT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G+Q + I+EP++YRL+VKS LP A+ FE+WVFEEVLP++RK G+Y + +A T+
Sbjct: 61 TSGVQNKKFINEPNLYRLIVKSKLPQAEHFEKWVFEEVLPSIRKHGAYMTDQVLEQAVTN 120
Query: 119 ASTVLRVHKHLEE--------------------LAKQAGLKDNQLLLKVNRGVTKITGVD 158
++ + +L+E A+ + N + +K + + G+D
Sbjct: 121 PDFMIGLLTNLKEEKAKRVEAERTILQQQPLVTFAEAVQVSTNLITVKQLANLMRQKGID 180
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP--T 216
+ + + + G N P + +L + + G + T
Sbjct: 181 TGQNRLFEWFRENGYLC----KKKGSLYNTPTQYSMDLELFESQEYVRTNSQGEFVTSFT 236
Query: 217 PKGEERGGKMCDVPM 231
K +G
Sbjct: 237 TKVTGKGQLYFINKF 251
>gi|15801289|ref|NP_287306.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 EDL933]
gi|15830811|ref|NP_309584.1| antirepressor protein [Escherichia coli O157:H7 str. Sakai]
gi|168749693|ref|ZP_02774715.1| antirepressor protein [Escherichia coli O157:H7 str. EC4113]
gi|168756450|ref|ZP_02781457.1| antirepressor protein [Escherichia coli O157:H7 str. EC4401]
gi|168762502|ref|ZP_02787509.1| antirepressor protein [Escherichia coli O157:H7 str. EC4501]
gi|168771643|ref|ZP_02796650.1| antirepressor protein [Escherichia coli O157:H7 str. EC4486]
gi|168776098|ref|ZP_02801105.1| antirepressor protein [Escherichia coli O157:H7 str. EC4196]
gi|168783549|ref|ZP_02808556.1| antirepressor protein [Escherichia coli O157:H7 str. EC4076]
gi|168787563|ref|ZP_02812570.1| antirepressor protein [Escherichia coli O157:H7 str. EC869]
gi|195938935|ref|ZP_03084317.1| putative antirepressor protein [Escherichia coli O157:H7 str.
EC4024]
gi|208806147|ref|ZP_03248484.1| antirepressor protein [Escherichia coli O157:H7 str. EC4206]
gi|208815980|ref|ZP_03257159.1| antirepressor protein [Escherichia coli O157:H7 str. EC4045]
gi|208822624|ref|ZP_03262943.1| antirepressor protein [Escherichia coli O157:H7 str. EC4042]
gi|209400295|ref|YP_002270016.1| antirepressor protein [Escherichia coli O157:H7 str. EC4115]
gi|217328298|ref|ZP_03444380.1| antirepressor protein [Escherichia coli O157:H7 str. TW14588]
gi|254792556|ref|YP_003077393.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. TW14359]
gi|12514734|gb|AAG55918.1|AE005325_11 putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. EDL933]
gi|13361021|dbj|BAB34980.1| putative antirepressor protein [Escherichia coli O157:H7 str.
Sakai]
gi|187768494|gb|EDU32338.1| antirepressor protein [Escherichia coli O157:H7 str. EC4196]
gi|188016020|gb|EDU54142.1| antirepressor protein [Escherichia coli O157:H7 str. EC4113]
gi|188999134|gb|EDU68120.1| antirepressor protein [Escherichia coli O157:H7 str. EC4076]
gi|189356395|gb|EDU74814.1| antirepressor protein [Escherichia coli O157:H7 str. EC4401]
gi|189359642|gb|EDU78061.1| antirepressor protein [Escherichia coli O157:H7 str. EC4486]
gi|189367136|gb|EDU85552.1| antirepressor protein [Escherichia coli O157:H7 str. EC4501]
gi|189372554|gb|EDU90970.1| antirepressor protein [Escherichia coli O157:H7 str. EC869]
gi|208725948|gb|EDZ75549.1| antirepressor protein [Escherichia coli O157:H7 str. EC4206]
gi|208732628|gb|EDZ81316.1| antirepressor protein [Escherichia coli O157:H7 str. EC4045]
gi|208738109|gb|EDZ85792.1| antirepressor protein [Escherichia coli O157:H7 str. EC4042]
gi|209161695|gb|ACI39128.1| antirepressor protein [Escherichia coli O157:H7 str. EC4115]
gi|217318725|gb|EEC27151.1| antirepressor protein [Escherichia coli O157:H7 str. TW14588]
gi|254591956|gb|ACT71317.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia coli O157:H7 str. TW14359]
gi|320187822|gb|EFW62492.1| Phage antirepressor protein [Escherichia coli O157:H7 str. EC1212]
gi|326339368|gb|EGD63180.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1044]
gi|326341501|gb|EGD65292.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1125]
Length = 292
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ T F+F ++IR +++K WFVAKDV AL NS +A+ A T G
Sbjct: 9 NDFTIFKFGDSEIR-VINKCGEPWFVAKDVCDALALTNSRKALTALDDDEKGVTLSYTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + I+SE +Y L+++ + KF +WV EVLP++RK G Y K +
Sbjct: 68 GEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYV----KGKK 123
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T+ + + L + GL+++ V++ G+D ++ + I+ +P +
Sbjct: 124 TTVEERTPLRDAVNMLVGKKGLRNDDAYNMVHQRF----GIDSIDELSIEQIPLAVE 176
>gi|229002959|ref|ZP_04160826.1| Antirepressor, phage associated [Bacillus mycoides Rock3-17]
gi|228758310|gb|EEM07490.1| Antirepressor, phage associated [Bacillus mycoides Rock3-17]
Length = 263
Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 28/255 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F ++ I+ KD +F A VA LGY N+ EAI HCK + + T
Sbjct: 7 MNQLQNFSHDAFGKLEILMKDGKEYFPATYVANLLGYANATEAIKRHCKTEGVAFHEVPT 66
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TS 118
G+Q + I+EP++YRL+VKS L A++FE+WVFEEVLP++RK G+Y + +A T+
Sbjct: 67 TSGVQNKKFINEPNLYRLIVKSKLTQAEQFEKWVFEEVLPSIRKHGAYMTDQALEQAVTN 126
Query: 119 ASTVLRVHKHLEE--------------------LAKQAGLKDNQLLLKVNRGVTKITGVD 158
++ + +L+E A+ + N + +K + + G+D
Sbjct: 127 PDFMIGLLTNLKEEQAKRIEAERKVLQQQPLVTFAEAVQVSTNLISVKQLANLMRQKGID 186
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG-GYRPT 216
+ + L + + G N P Q + L + ++ + + T
Sbjct: 187 TGQNRLFEWLRENGYLC----KKKGSLYNTPTQYSMDLGLFESQEYIRTNSNGEFETKFT 242
Query: 217 PKGEERGGKMCDVPM 231
PK +G
Sbjct: 243 PKVTGKGQFYFINKF 257
>gi|240016262|ref|ZP_04722802.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
Length = 289
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F + +KD WFVA DV AL +N +A+ + +
Sbjct: 1 MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQALEKLDDDERSMFNIGRS 60
Query: 61 ---GGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG V II+E +Y L+++S +A KF +WV EVLPT+RKTG Y V
Sbjct: 61 EIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVTSEVLPTIRKTGGYQVGQK 120
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T+A + + + L + G+ + +++ V+ +E + LP +
Sbjct: 121 ----TTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPAGKLPEAV 172
Query: 173 NDEYLTITQIGERLNPPQRARF 194
Y+ + L R
Sbjct: 173 --AYVHALTLHTGLTGEVLDRE 192
>gi|213967380|ref|ZP_03395528.1| phage protein [Pseudomonas syringae pv. tomato T1]
gi|213927681|gb|EEB61228.1| phage protein [Pseudomonas syringae pv. tomato T1]
Length = 285
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PF FE+ ++RT++ DQ WFVA DV+ AL Y ++ ++T G
Sbjct: 9 SNVIPFRFETKEVRTLLINDQ-PWFVANDVSAALLYSEASAMTRHLDDDEKGLSIVQTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ +I+E +Y +++S A++F++WV EVLP +RKTG Y ++ T
Sbjct: 68 GDQEMLVINESGLYSAILRSRKAEAKRFKKWVTAEVLPAIRKTGRYEEPVGRMATLIGQT 127
Query: 122 VLRVHKHLEELAKQAGLK------DNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ H+ + + + + K+ GV + + L S+ N
Sbjct: 128 IGTDGFHMLAALVKGKVSGLPKAVQRRAISKIWSQAHAAFGVRSAADIPAELLDSARN 185
>gi|241894860|ref|ZP_04782156.1| possible antirepressor [Weissella paramesenteroides ATCC 33313]
gi|241871868|gb|EER75619.1| possible antirepressor [Weissella paramesenteroides ATCC 33313]
Length = 333
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 39/257 (15%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ + FE +R ++ D WFV KDVA LGY + +A+ H ++
Sbjct: 1 MNNELQVLGFEGKDVRQVMIDD-EPWFVGKDVAEVLGYAKAKDAVVKHVDNEDRKMGPQV 59
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLV----KSTLP----SAQKFERWVFEEVLPTLRK 103
+ G Q I+E +Y ++ +S P A+KF+RW+ EVLP +RK
Sbjct: 60 GAPSITDSLGREQYPIFINESGIYSMIWDASKQSRNPQMKEQAKKFKRWLTTEVLPDIRK 119
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLE-ELAKQAGLKDNQLLLKVNRGVTKITGVDQ--- 159
G+Y E L S T++RV L+ E A A L+++ + + G + GV
Sbjct: 120 HGAYMTEEVLL---SPETLIRVATDLKNERALTAKLQEDAKVALIMEGSKESMGVSAFAK 176
Query: 160 -------LEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQV----- 206
++ + K ++ ++ T+ G+ N P ++ + +K L
Sbjct: 177 VLNKEYGIKIGEKKLYQWFRDNGWVCTTKRGDNYNLPTSKSLDFGYMEVKETLYTYQIVS 236
Query: 207 -SKVSGGYRPTPKGEER 222
+KVS TPKG
Sbjct: 237 NNKVSRTTMITPKGHNY 253
>gi|218439362|ref|YP_002377691.1| prophage antirepressor [Cyanothece sp. PCC 7424]
gi|218172090|gb|ACK70823.1| prophage antirepressor [Cyanothece sp. PCC 7424]
Length = 230
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE+ ++R + D W VA+DV TAL +N+++ + L T
Sbjct: 1 MSDLIIFGFENQEVRFVGTPDHLEW-VAQDVCTALEIKNASDTLAKFDSDEKGITNLNTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA---PKLRAT 117
GG+Q++ ++E +YRL+ KS A++F+RW+F EVLP+LR+TGSYS+ P
Sbjct: 60 GGVQELLTVTEAGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSINQSKEPPKALI 119
Query: 118 SASTVLRVHKHLEELAKQAG 137
+A + +++ + +++ +
Sbjct: 120 AARAINEINELVVDISPRLA 139
>gi|256828702|ref|YP_003157430.1| prophage antirepressor [Desulfomicrobium baculatum DSM 4028]
gi|256577878|gb|ACU89014.1| prophage antirepressor [Desulfomicrobium baculatum DSM 4028]
Length = 217
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1 MSTI-TPFEFESNKIRT----IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--K 53
M+ I T F+F RT + D++ + WF+AKDV LG+ N ++A +
Sbjct: 16 MNNIITTFQFSLTTGRTLNVRVTDQNGDPWFIAKDVCDVLGFANPSDATKYLDEDEKALI 75
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
P T V II+E +Y L+++S A++F++WV EVLP++RK G Y +
Sbjct: 76 NNPSLTANPNGNVTIINESGLYSLILRSRKAEAKRFKKWVTSEVLPSIRKHGGYLKGQEE 135
Query: 114 LRATSASTVLRVHKHLEELA 133
L V +HK + E A
Sbjct: 136 LP---EGLVSSLHKTIRENA 152
>gi|228990367|ref|ZP_04150332.1| Prophage antirepressor [Bacillus pseudomycoides DSM 12442]
gi|228768893|gb|EEM17491.1| Prophage antirepressor [Bacillus pseudomycoides DSM 12442]
Length = 246
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F+ E ++R+I + + I+FVAKDV+ L + ++ A + +
Sbjct: 2 MNNLLVFDHEELGQVRSI-KQGEEIYFVAKDVSDILEFRDAYTATRGLDDDEKLLHTIYV 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRAT 117
G ++V +I+E +Y L++ S P A+ F++W+ EVLP++RK G Y + E +A
Sbjct: 61 AGQNREVTLINESGLYGLILTSRKPQAKAFKKWITSEVLPSIRKDGGYLVTTEEDDEQAI 120
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
A +L + LE Q + + ++ V K+ D++ + Y
Sbjct: 121 MAKALLLAQRTLERKNVQLKQAEETIKIQ----VPKVEYTDKV----------LSTEGYY 166
Query: 178 TITQIGERLNPPQRARFLNKLLLKR 202
T T++ + NKL+ K+
Sbjct: 167 TATEVAKIFGMRSPQGLYNKLVDKK 191
>gi|330985509|gb|EGH83612.1| prophage antirepressor [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 285
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S + PF FE+ ++RT++ DQ WFVA DV+ AL Y ++ ++T G
Sbjct: 9 SNVIPFRFEAKEVRTLLINDQ-PWFVANDVSAALLYSEASAMTRHLDDDEKGLSIVQTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ +I+E +Y +++S A++F++WV EVLP +RKTG Y A ++ T
Sbjct: 68 GDQEMLVINESGLYSAILRSRKAEAKRFKKWVTGEVLPAIRKTGRYEEPAGRMATLIGQT 127
Query: 122 V 122
+
Sbjct: 128 I 128
>gi|15674990|ref|NP_269164.1| putative phage associated antirepressor [Streptococcus phage 370.3]
gi|13622137|gb|AAK33885.1| putative antirepressor - phage associated [Streptococcus phage
370.3]
Length = 248
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 15/219 (6%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKTE 60
+ F E ++RT +Q I+F D L N + I K GV + +
Sbjct: 2 ELQVFTNEQFGEVRTATINNQ-IYFNLNDCCQILELSNPRKTIERLNKDGVTTSDIIDSL 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
G Q+ I+E + Y+L+ +S P A+KF WV EVLP++RK G+Y E +A TS
Sbjct: 61 GRTQQANFINESNFYKLVFQSRKPEAEKFADWVTSEVLPSIRKHGAYMTEQTLEQALTSP 120
Query: 120 STVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++R+ L EE + L+ + +L V V K D + +
Sbjct: 121 DFLIRLANELKEEKERSRQLEAEKSILSVENMVMK--------PKADYFDDLVDRNLLTS 172
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ ++L + R + LL + G P
Sbjct: 173 FRETAKQLKVKE--RRFIQFLLDKKYVYRDKKGKLMPFA 209
>gi|258515114|ref|YP_003191336.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
gi|257778819|gb|ACV62713.1| prophage antirepressor [Desulfotomaculum acetoxidans DSM 771]
Length = 272
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 1 MSTIT-PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F +E ++RT++ + WF AKDV L NS A + + + L
Sbjct: 6 MNELQKVFNYEGQQVRTVL-INGEPWFAAKDVCDILEISNSRHATSRLPERMKDTVVLSD 64
Query: 60 E-GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR--A 116
G +++ IISEP +Y+L+V+S P A+KF WV EEVLP++RKTG+YS ++
Sbjct: 65 AVGRTKEMTIISEPGLYKLVVRSDKPEAEKFTDWVVEEVLPSIRKTGTYSNRHTEIDLLL 124
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQL 143
SA +R + + + +Q + + +L
Sbjct: 125 ASAEWQVRAAREIISIKQQLKITEERL 151
>gi|319646356|ref|ZP_08000586.1| prophage antirepressor [Bacillus sp. BT1B_CT2]
gi|317392106|gb|EFV72903.1| prophage antirepressor [Bacillus sp. BT1B_CT2]
Length = 257
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 24/245 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKT 59
M+ + F + IV + ++F A + AT LGY N ++AI+ HCK + + +
Sbjct: 1 MNQLQIFSNKEFGSLPIVYIENKVYFGATESATTLGYVNPHDAISKHCKKEGVAFHEVLS 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q+ + I+E ++YRL+ +S LPSA+KFE WVF+EV+PT+RKTG Y T
Sbjct: 61 NGGPQRKKFINEGNLYRLISRSKLPSAEKFESWVFDEVIPTIRKTGGYVANDDLFIQTYL 120
Query: 120 STVLRVHKHL--------EELAKQAG-LKDNQLLLKVNRG---------VTKITGVDQLE 161
K L +E +KQ +K L + KI + +E
Sbjct: 121 PQADEQTKQLFKVTLHTMKEQSKQIETMKPKALFADAVEASESSVLVGELAKILKQNGIE 180
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYR--PTPK 218
K + YL I + GE N P QR+ + +K+ ++ G R TPK
Sbjct: 181 IGQNKLFKWLRENGYL-IRKKGESFNLPTQRSMDMGLFEIKKST-INNPDGSVRTTRTPK 238
Query: 219 GEERG 223
+G
Sbjct: 239 VTGKG 243
>gi|125974947|ref|YP_001038857.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
gi|125715172|gb|ABN53664.1| BRO-like protein [Clostridium thermocellum ATCC 27405]
Length = 248
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-K 58
M+ + F ++ ++RT + D W+VAKDV L ++++A+ + P+
Sbjct: 1 MADLPQVFNYKGKQVRTFI-IDGEPWWVAKDVCDILELGDTHKAMERLDEDERNTIPVTD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ G +Q+ +++E +Y L++ S A++F+RW+ EV+P +RKTG Y++E +L A
Sbjct: 60 SLGRLQETYVVNEAGLYNLILGSRKQEAKEFKRWITHEVIPQIRKTGIYALEPKQLLAV- 118
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
++ K +EE + K+ K D + +
Sbjct: 119 --AIIEAQKIIEEQDR-----------KIKELQPKAEFFDAVAGSKDAIDMNRAAKLIYE 165
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
T++G L KLL +G+ + P + ++G
Sbjct: 166 ETRLGR--------NKLFKLLRDKGILMKDN----IPYQEYIDKG 198
>gi|284800079|ref|ZP_05985661.2| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
gi|284796123|gb|EFC51470.1| putative antirepressor protein encoded by prophage protein
[Neisseria subflava NJ9703]
Length = 322
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F F N+I+ +++K+ WF+A +VA LGY +S + + T
Sbjct: 43 MNNSVQSFNFNQNQIQ-VINKNGEAWFIASEVAAMLGYRDSYNMTRILDNDEKGTHNVST 101
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q V +I+E Y KS P + F +WV EVLP +RKTG Y V T+A
Sbjct: 102 LGGNQDVSVINESGFYHAAFKSRKPEVKPFRKWVTSEVLPAIRKTGGYQVGQK----TTA 157
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY--- 176
+ + + L + G+ + +++ V +E + + LP + +
Sbjct: 158 DDRTGLRQAVAALVGRKGIDYSTAYGMIHQRF----NVGAIEDIPAEKLPEAVAYTHALT 213
Query: 177 LTITQIGERLNPPQRAR 193
L GE L+ P +A+
Sbjct: 214 LHTGLTGEVLDTPPKAK 230
>gi|237745723|ref|ZP_04576203.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377074|gb|EEO27165.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 290
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 15 RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEP 72
RT+ D +WF A DV + LGY NS + I HCK GV KRY + + G ++V I+EP
Sbjct: 2 RTVA-IDGEVWFCAADVCSVLGYTNSRKVIADHCKASGVTKRY-ISSGGQNREVIFINEP 59
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
++YRL+++S P A+KFE WV EEVLP +RKTGSYSV K++ +T++
Sbjct: 60 NLYRLIIRSKKPEAEKFETWVMEEVLPAIRKTGSYSVSINKIQQGELATLIA 111
>gi|255957554|dbj|BAH96616.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957599|dbj|BAH96652.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957609|dbj|BAH96660.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957614|dbj|BAH96664.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957619|dbj|BAH96668.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957624|dbj|BAH96672.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957629|dbj|BAH96676.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957634|dbj|BAH96680.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957639|dbj|BAH96684.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957644|dbj|BAH96688.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957649|dbj|BAH96692.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957654|dbj|BAH96696.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957659|dbj|BAH96700.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957664|dbj|BAH96704.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957669|dbj|BAH96708.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957674|dbj|BAH96712.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957679|dbj|BAH96716.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957684|dbj|BAH96720.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 88/100 (88%), Positives = 90/100 (90%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY PTPKGEE
Sbjct: 1 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYIPTPKGEEY 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPM HVEGSTQ LKWNS+LLV +LQNE N L
Sbjct: 61 GGKMCDVPMHHVEGSTQSLKWNSSLLVPYLQNEFNNNQHL 100
>gi|260555806|ref|ZP_05828026.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
gi|260410717|gb|EEX04015.1| gp54 protein [Acinetobacter baumannii ATCC 19606]
Length = 184
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYP- 56
M+ IT F+F+S +R ++D +Q WF DV AL S++ + K +
Sbjct: 1 MNAITHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDISRSSDLLQIQRGDVKNETPKRNG 60
Query: 57 -----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKTG
Sbjct: 61 ALDSKGVADYHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKTG 120
Query: 106 SYSVEAPKLRATS 118
SYS +
Sbjct: 121 SYSARQSAYEELN 133
>gi|256021965|ref|ZP_05435830.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia sp. 4_1_40B]
gi|325497772|gb|EGC95631.1| putative antirepressor protein encoded by prophage CP-933N
[Escherichia fergusonii ECD227]
Length = 292
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 21/270 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ T F+F ++IR +++K WFVAKDV AL NS +A+ A T G
Sbjct: 9 NDFTIFKFGDSEIR-VINKCGEPWFVAKDVCDALDLTNSRKALTALDDDEKGVTLSYTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + I+SE +Y L+++ + KF +WV EVLP++RK G Y K +
Sbjct: 68 GEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYV----KGKK 123
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN--- 173
T+ + + L + GL+ + V++ G+D ++ + I+ +P +
Sbjct: 124 TTVEERTPLRDAVNMLVGKKGLRYDDAYNMVHQRF----GIDSIDELSIEQIPLAVEYIH 179
Query: 174 ---DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
E I + ++ N A+ N L+ + P ++
Sbjct: 180 RVVLEGEFIGKQEKKTNE-LSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRC 238
Query: 231 MQHVEGSTQQLKWNSNLLVSFLQNELINTP 260
+ + + ++L++ ++ IN P
Sbjct: 239 YDYGHEFSYVIGMARDVLINHTRDVDINEP 268
>gi|71899744|ref|ZP_00681895.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730439|gb|EAO32519.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 196
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ I PF+F S+ +R ++ +D N WF A DVA ALGY ++ A AH KG +
Sbjct: 1 MTQSIIPFDFHSHVVRVVM-RDGNPWFAATDVAVALGYRDAANAARHVGAHQKG---THI 56
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G Q + I+SE +YRL+++S A F WV +EVLP +RKTGSY+ +
Sbjct: 57 VSTIKGNQSLTIVSEGGLYRLVLRSRRAEAVAFSDWVTDEVLPLIRKTGSYTATGTMVND 116
Query: 117 TSASTVLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + + H ++L + + + K Q L G T+I+G
Sbjct: 117 DALCAIWFLCDHFKKLHEMSRVNKVPQALY--WLGATEISG 155
>gi|187477955|ref|YP_785979.1| phage protein [Bordetella avium 197N]
gi|115422541|emb|CAJ49066.1| phage protein [Bordetella avium 197N]
Length = 374
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE- 60
S F F + +R +V +D WFVA DV AL Y+N+++A+ H + E
Sbjct: 55 SVPKNFNFGDHPVRVVV-RDCEPWFVATDVCAALDYKNASKAVGDHLDDDERMTIAANES 113
Query: 61 ---------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
GG + + II+E +Y L+++S P A+KF +WV EVLP +RKTG
Sbjct: 114 HSNDSNQSLESSCGRGGARSLVIINESGLYALVLRSRKPEARKFAKWVTSEVLPQIRKTG 173
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM-- 163
+Y PK A + + + K +E+ +Q + K +G + +L+A
Sbjct: 174 AY---LPKEFAVNPGDI--LTKQQQEVLRQLVKSTVDRMPKAKQGAVAVKMWSKLKAHFG 228
Query: 164 -DIKHLPSSDNDEYLT-ITQIGERL 186
+ +P + E ++ +T+
Sbjct: 229 VGYREIPQQEFTEAVSLLTRAATEW 253
>gi|322384069|ref|ZP_08057789.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321151225|gb|EFX44522.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 236
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 28/207 (13%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
+V KD + W+VAKDV+ LG+ +++ ++T GG Q+V II+E +Y
Sbjct: 1 MVVKDGHPWWVAKDVSELLGFRMASDFTRTLDDDEKDTQIVRTPGGNQEVTIINESGLYS 60
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQA 136
++KS P A++F+RWV EVLP +RKTG Y+ + +++ L+E +
Sbjct: 61 AILKSRKPEAKQFKRWVTHEVLPAIRKTGMYATDELL---DDPELLIQAVTKLKEEREVR 117
Query: 137 GLKDNQLLLKVNRGVTKITGVDQLEAMDI--------------------KHLPSSDNDEY 176
QL +V K+ D + A K L +
Sbjct: 118 R----QLEAQVKSDRPKVLFADSVTASPTSILVGELAKMLKQNGFDIGEKRLFEWMRKQG 173
Query: 177 LTITQIGERLN-PPQRARFLNKLLLKR 202
I + G N P QRA + +K
Sbjct: 174 YLIKRKGTDRNIPTQRAMEMGLFEIKE 200
>gi|273809579|ref|YP_003344817.1| putative antirepressor protein Ant [Aggregatibacter phage S1249]
gi|261410486|gb|ACX80317.1| putative antirepressor protein Ant [Aggregatibacter phage S1249]
Length = 289
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 17/209 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + F FES IRT+ + WFVAKDV A+ NS ++ A + T
Sbjct: 5 TQLCTFNFESKSIRTLAINN-EPWFVAKDVCDAINLTNSRMSLLALDDDEKGVSLIYTPS 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ I+SE +Y L+++ + +F +WV EVLP +RKTG Y +
Sbjct: 64 GQQEMNIVSESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPAIRKTGKYEAK------ 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T+A + + L + G + + V + V+++E + L S+ +
Sbjct: 118 TTADDRTGLRNAVNMLVSKKGF----IYSEAYNLVHQYMNVERIEDIPADKLQSAVEYVH 173
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQ 205
I GE + P++ + + LQ
Sbjct: 174 -RIVLEGELITEPKKDELFTREFTEHELQ 201
>gi|218689443|ref|YP_002397655.1| putative antirepressor protein from phage origin [Escherichia coli
ED1a]
gi|218690200|ref|YP_002398412.1| putative antirepressor protein in prophage [Escherichia coli ED1a]
gi|218427007|emb|CAV17743.1| putative antirepressor protein from phage origin [Escherichia coli
ED1a]
gi|218427764|emb|CAR08674.2| putative antirepressor protein in prophage [Escherichia coli ED1a]
Length = 304
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ T F+F ++IR +++K WFVAKDV AL NS +A+ A T G
Sbjct: 9 NDFTIFKFGDSEIR-VINKCGEPWFVAKDVCDALNLTNSRKALTALDDDEKGVTLSYTLG 67
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + I+SE +Y L+++ + KF +WV EVLP++RKTGSY +A
Sbjct: 68 GEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKTGSYGNTLKAKKA 127
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
++ +E KQ + Q L K + IT L++
Sbjct: 128 LPG----KITTEQQEAIKQLVMSRGQSLPKEKQAKAMITMWSSLKSH 170
>gi|260911967|ref|ZP_05918531.1| phage antirepressor protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633914|gb|EEX52040.1| phage antirepressor protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 265
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 12/245 (4%)
Query: 1 MST-ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+ I+ F+ + +IRT D N F D+ L G + +
Sbjct: 1 MNNQISIFQNPQFGEIRTAGTPD-NPLFCLADLCRVLELRVDGVTPRLKRDGYNRIGVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ G Q+ ++E ++Y+++++S P A+ F+ WV EVLPT+RKTG Y AP++
Sbjct: 60 SLGREQQAIFVNEQNLYKVIMRSDKPQAEPFQDWVCGEVLPTIRKTGGYIATAPEMSDAE 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ ++ A ++ Q+ + + + Q++ + + L
Sbjct: 120 IMAKAMIVAQNTIASRNARIQQLQVENNEQKQL-----IAQMQKGNDYLNVILQSKGTLA 174
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
TQ+ A NK L + +Q KV+G + + +G + QH +G
Sbjct: 175 TTQVAADYG--MSAVSFNKRLKEMRIQ-RKVNGQWILYTEFMGKGYVHSKTIAFQHTDGR 231
Query: 238 TQQLK 242
Sbjct: 232 HDTRL 236
>gi|118466591|ref|YP_880110.1| gp54 protein [Mycobacterium avium 104]
gi|118167878|gb|ABK68775.1| gp54 protein [Mycobacterium avium 104]
Length = 262
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 93/250 (37%), Gaps = 17/250 (6%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + F + ++R I D D + WFV D+ L N+ + + T
Sbjct: 1 MSAVELFTYAGGYQVRVIRDDDGDPWFVLADLCRVLDIRNARDVAARLADDQKGVDQVDT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q++ ++SE +Y ++++S A F RWV EVLP +RKTG+YS R +
Sbjct: 61 PGGRQQMTLVSEAGMYEVVIRSDKSEAVSFRRWVTGEVLPAIRKTGTYS------RYPAG 114
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
L K L + A + + KV ++L + D
Sbjct: 115 PAALPSKKELAQWVIDAEERAERAEAKVAELTPPAAAWNELA------ESAGDYSVADAA 168
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV--PMQHVEGS 237
+ R L + G KV G +R E G V P H EG
Sbjct: 169 KVLSRDPQIETGERRLYAFMAAIGWVF-KVKGRWRAYQSQVEIGRLSEKVGKPFWH-EGR 226
Query: 238 TQQLKWNSNL 247
+ + + +
Sbjct: 227 GEMVLPDPTV 236
>gi|294649666|ref|ZP_06727078.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|292824445|gb|EFF83236.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 141
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH---CKGV------ 51
M+ +T F+F+S+ +R D++ F DV L S++ + K
Sbjct: 1 MNAVTHFDFKSSSVRIAYDENGEPLFCLADVCKVLNISRSSDLLQIQRGCVKNETPKRHG 60
Query: 52 ------AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ + T GG Q++ I+EP++YR++ +S P A F+ WVF EVLP++RKTG
Sbjct: 61 ALDPIGVHKISVSTNGGKQELIFINEPNLYRVIFRSNKPEAINFQNWVFAEVLPSIRKTG 120
Query: 106 SYSVEAPKLRATSASTVLRVHKHLE 130
SYS R T+ + R+ +
Sbjct: 121 SYSA-----RQTAYEELNRLCMQAK 140
>gi|169796904|ref|YP_001714697.1| hypothetical protein ABAYE2900 [Acinetobacter baumannii AYE]
gi|213156693|ref|YP_002318354.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|294840370|ref|ZP_06785053.1| gp54 protein [Acinetobacter sp. 6014059]
gi|301346240|ref|ZP_07226981.1| gp54 protein [Acinetobacter baumannii AB056]
gi|301513005|ref|ZP_07238242.1| gp54 protein [Acinetobacter baumannii AB058]
gi|301597472|ref|ZP_07242480.1| gp54 protein [Acinetobacter baumannii AB059]
gi|169149831|emb|CAM87722.1| hypothetical protein from bacteriophage [Acinetobacter baumannii
AYE]
gi|213055853|gb|ACJ40755.1| gp54 protein [Acinetobacter baumannii AB0057]
gi|323517038|gb|ADX91419.1| hypothetical protein ABTW07_0983 [Acinetobacter baumannii
TCDC-AB0715]
Length = 184
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYP- 56
M+ +T F+F+S +R ++D +Q WF DV AL S++ + K +
Sbjct: 1 MNAVTHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDISRSSDLLQIQRGDVKNETPKRNG 60
Query: 57 -----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKTG
Sbjct: 61 ALDSKGVADYHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKTG 120
Query: 106 SYSVEAPKLRATS 118
SYS +
Sbjct: 121 SYSARQSAYEELN 133
>gi|31544021|ref|NP_852746.1| putative antirepressor protein Ant [Haemophilus phage Aaphi23]
gi|31408065|emb|CAD90799.1| putative antirepressor protein Ant [Haemophilus phage Aaphi23]
Length = 298
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 16/177 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S ++ + FES+ IRT+ + WF+AKDV A+G +N+ +A+ A + T G
Sbjct: 5 SQLSTYNFESHTIRTLAINN-EPWFIAKDVCDAIGIDNNRKALLALDEDEKGVTLSNTLG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q++ IISE +Y L+++ + +F +WV EVLP +RKTG Y +
Sbjct: 64 GKQEMNIISESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPAIRKTGKYEAK------ 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
T+ + + L + GL + + + + V+ +E + ++ LP +
Sbjct: 118 TTVDDRTGLRNAVNMLVSKKGL----IYSEAYHLIHQRFNVESIEDLTLEQLPQAVE 170
>gi|329114008|ref|ZP_08242775.1| Hypothetical protein APO_0784 [Acetobacter pomorum DM001]
gi|326696755|gb|EGE48429.1| Hypothetical protein APO_0784 [Acetobacter pomorum DM001]
Length = 249
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F+FE + +RTI ++D + +V DV + L NS +A N T GG Q++
Sbjct: 10 FDFEGHTVRTI-NRDGVVLWVLTDVCSVLDIRNSRDAANRLDDDERGVAITDTLGGSQEM 68
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLRATSASTV 122
+I+E +Y L++ S +A++F++WV EVLP LR+TG+YS+ + + + + + +
Sbjct: 69 TVINESGLYSLVLTSRKAAAKRFKKWVTAEVLPALRRTGTYSICTQPDIGHVLSVAEAAI 128
Query: 123 LRVHKHLEELAKQA 136
+ + ++ LA QA
Sbjct: 129 VVSQQAVQTLAPQA 142
>gi|109392527|ref|YP_655656.1| gp77 [Mycobacterium phage Che12]
gi|91980677|gb|ABE67396.1| gp77 [Mycobacterium phage Che12]
Length = 280
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 2 STITPFEFES------------NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC- 48
+ I F+F++ +R +V D WFVAKDV LG++N A+N H
Sbjct: 5 TEIEIFQFQNVPSTEDGGLVIDAPVR-VVQLDGEPWFVAKDVTDILGFKNGRGAVNDHVL 63
Query: 49 KGVAKRYPLKTEGG---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
G + + T G + + +I+E +YRL+++S +P+A F+ WV VLPT+RKTG
Sbjct: 64 PGQVQTERIATPGQVVPHRDMLVINEAGLYRLIMRSNVPAAAPFQDWVTAVVLPTIRKTG 123
Query: 106 S-YSVEA--PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
Y L +ST L K +A++A K L++ V++ +
Sbjct: 124 GAYIAPGSKAALDLMDSSTALEAIKKAVAIAEEAQAK---LVVAEAEKAVLEAKVEEDKP 180
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLK 201
M + ++ +L P N +L +
Sbjct: 181 MVHAAEEFFGEEGLCSLRDAARKLGVPP--LTFNDILRE 217
>gi|149882791|ref|YP_001294770.1| hypothetical protein MPMin1_gp10 [Microbacterium phage Min1]
gi|148763422|gb|ABR10440.1| hypothetical protein [Microbacterium phage Min1]
Length = 250
Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGG 62
+ F F+ + +R ++ + FVA+DVA+ALGY + AI HC+GVA +P+ + G
Sbjct: 1 MEVFGFDGHHVRVVLVE-GLPRFVARDVASALGYTDPTSAIKQHCRGVAIHHPITDSLGR 59
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q R+I EPD+ RL+ S LP A++FERW FEEVLPT+ +TGSY+ P L + A +
Sbjct: 60 TQLARVIGEPDLLRLITGSRLPQAERFERWAFEEVLPTVIRTGSYTAPPPALPQSYADAL 119
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
+ +E + L + + D+L + +I
Sbjct: 120 RELAATVE--------RAEALETENAALTPRAEAWDELADAGTDY-------AVGDAAKI 164
Query: 183 GERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+R P + L + L G +R
Sbjct: 165 LQRAGVPTGPQRLFEQLSDLGWIFRGGDRRWRAYS 199
>gi|322412501|gb|EFY03409.1| putative antirepressor [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 251
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 10/218 (4%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ F+ E ++RT D + +F KD L +NS + + L T G
Sbjct: 2 ELQIFKNEQFGEVRT-ADINGESFFNLKDCCKILEIKNSKDVVKRLNPKGVVTTDLLTNG 60
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q+ I+E + Y+L+ +S P A+KF WV EVLP++RK G Y + T
Sbjct: 61 GTQQANFINESNFYKLVFQSRKPEAEKFADWVTSEVLPSIRKRGVYMTDKVAYDITHDKQ 120
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSDNDEYLTI 179
L + LK+ ++++K T V++ ++ D + +
Sbjct: 121 ALGDLLLMA----GQQLKEKEVIIKGLEAETSRLTVEKAIMQPKADYFDELVDRNLLTSF 176
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ ++ + R + LL + G P
Sbjct: 177 RETAKQFKVKE--RQFIQFLLDKKYIYRDRKGKLMPFA 212
>gi|58040895|ref|YP_192859.1| Phage-related DNA binding protein [Gluconobacter oxydans 621H]
gi|58003309|gb|AAW62203.1| Phage-related DNA binding protein [Gluconobacter oxydans 621H]
Length = 240
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ IT F FE + D F A VA ALGY ++++A+ HCK AK YP++
Sbjct: 1 MTEITLFRFEDFDV-VAALLDGEPQFAASQVAAALGYADTDQAVRKHCKA-AKTYPVEMT 58
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G ++ V++I E DVYRL+++S P+A+ FE V E+LP++RKTG Y AP + +
Sbjct: 59 GQVRNVKMIPERDVYRLILRSKKPTAEAFEEKVVGEILPSIRKTGGYKA-APAIDLNDPA 117
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ + E K L ++ K G D+ + + +
Sbjct: 118 FLRQTLLGYTE-------KVIALEAEITTLTPKAEGFDRFANSTGRTI----------LR 160
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
++G+ L+ + +LL ++ +G + + G + DV S +
Sbjct: 161 EVGKALHIGSKRGI--ELLREKKWTFRAPNGKWHAYSAKVDAG--LLDVKYVTYTNSVGE 216
>gi|312114251|ref|YP_004011847.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
gi|311219380|gb|ADP70748.1| prophage antirepressor [Rhodomicrobium vannielii ATCC 17100]
Length = 256
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKT 59
I PF+FE N +R IV++D WFV DV L N A + H + + R
Sbjct: 6 AIVPFDFEGNNVR-IVNRDGEAWFVLADVCRVLEIANVGNASARLKEHEQN-SIRLTDVI 63
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV----EAPKLR 115
G V II+EP YRL+++S P+A++F+ WV EVLP++RKTGSYS E +
Sbjct: 64 RRGNPNVTIINEPGFYRLVLRSDKPAAERFQDWVVTEVLPSIRKTGSYSARQAEEPRRRE 123
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLL 144
A VL + + + A +N+++
Sbjct: 124 LVLADEVLALKRLMLSTTDYAVGLENRIM 152
>gi|192824244|ref|YP_001994885.1| gp68 [Mycobacterium phage Pukovnik]
gi|190610474|gb|ACE79994.1| gp68 [Mycobacterium phage Pukovnik]
Length = 271
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 1 MSTITPFEFES------------NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC 48
MS I F+F++ ++R + + WFVAKDV LG N ++
Sbjct: 12 MSEIEKFQFQNVPSADEGGLVINAEVRVVTIE-GEPWFVAKDVCEVLGLTNPTVVVSRLD 70
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
++ L +++E +Y L+V+S P A+ F +WV EVLPT+RKTG Y
Sbjct: 71 ADERAKFDLGPF--APAANVVNESGLYALIVRSDKPQAKAFRKWVTSEVLPTIRKTGGYL 128
Query: 109 VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
+P+L + L + + A++A K L K+ K+ ++
Sbjct: 129 --SPELDLSDPDVALAKLIEVAKAAQEARAKAAFLENKIAVDAPKVRAAEEF-------- 178
Query: 169 PSSDNDEYLTITQIGERLNPP 189
D + ++ +L P
Sbjct: 179 --FDMEGLFSLRDSARKLGVP 197
>gi|326574475|gb|EGE24417.1| BRO family protein [Moraxella catarrhalis 101P30B1]
Length = 292
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I+ F FES ++RT + +IWF DVA L N+N + + + +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISY 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y ++ T
Sbjct: 61 ESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGRYVAKSTVSDRTP- 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ + + L + GL VN+ + + +D+++ D+
Sbjct: 120 -----LRQAVSMLVSRCGLDYGTAYTMVNQYM-ETQHIDEIDLADL 159
>gi|200389320|ref|ZP_03215931.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199601765|gb|EDZ00311.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 288
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 8/185 (4%)
Query: 6 PFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGG 62
F F E++ +R I D WF KDV L N + + GV K Y L T+GG
Sbjct: 47 TFSFHETHDVR-IQVIDGEPWFCLKDVCGVLCIANPRDLMAKQLDKEGVDKIYTL-TDGG 104
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q++ ++EP++YR++ +S A++F+ WVF +VLPT+RK+G Y P + + +
Sbjct: 105 KQQLVYVNEPNLYRVIFRSNKQEAKQFQDWVFNDVLPTIRKSGRYE-RQPAADPLTPNDM 163
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
+ + + + LK V + TG + + LP +E I +I
Sbjct: 164 NNLKRLIWLMTDSMRLK-QSWSNGVWYALRAATGRPSPQPFTVDDLPVL-GEECRRIMKI 221
Query: 183 GERLN 187
N
Sbjct: 222 TSAFN 226
>gi|302388049|ref|YP_003823871.1| prophage antirepressor [Clostridium saccharolyticum WM1]
gi|302198677|gb|ADL06248.1| prophage antirepressor [Clostridium saccharolyticum WM1]
Length = 276
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 30/251 (11%)
Query: 4 ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-------VAKRY 55
+ FE E IR ++ + +F A DVA ALGY N A+ HCKG V ++
Sbjct: 24 MEVFENQEFGSIR-VLQEAGKTFFCASDVAKALGYVNPYAAVKRHCKGPLTKREGVVQKV 82
Query: 56 PLKTEGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ G Q ++ I+E DVYRL+V S LPSA++FE WVF+EVLP++RK G Y ++
Sbjct: 83 NQYGDAGEQVVEIAFITEGDVYRLIVHSKLPSAERFEHWVFDEVLPSIRKHGVYMSDSIL 142
Query: 114 LRATSASTVLR--VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ V+ + + E + G++ +D +
Sbjct: 143 DQVIQHPEVIYTLAQELVAEREQLEGIRKQ---------------LDAAQPKADYFDTFV 187
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
++++ I + + P++ LLL SG P RG +
Sbjct: 188 NSEDCTCIRNFCKEIGIPEKTAVA--LLLDHRYLYRSPSGWLMPFADKSARGYFIVRDCY 245
Query: 232 QHVEGSTQQLK 242
QQ +
Sbjct: 246 GRSGKLVQQTR 256
>gi|330433318|gb|AEC18377.1| BRO family, N-terminal domain protein [Gallibacterium anatis
UMN179]
Length = 226
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS +T F FE ++I+TI++ + I+F A +A L Y N ++AI H + KR +
Sbjct: 1 MSNLTIFNFEHSQIQTIIENN-EIFFRATQLAELLEYSNPHKAIKDHVDPDDLTKREVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T Q+V ++E +Y L++ S LPSA+K +RWV EVLP +RKTG YS++ +L
Sbjct: 60 TIRRKQRVLFVNESGMYSLVLGSKLPSAKKVKRWVTSEVLPQIRKTGKYSLQNQQLALPE 119
Query: 119 ASTVLRVHKHLEELAKQAGL-----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS--- 170
EL L + QL+ +N + ++ +A + S
Sbjct: 120 PEKTFSTELSEYELQTLVWLWIAMSEQQQLIKHLNPALQQLGSSFAPKAHSLVAEFSPVL 179
Query: 171 SDNDEYLT--ITQIG----ERLNPPQRARFLNKLLLKRG 203
+D ++ L +I + N + L + K+
Sbjct: 180 ADANQLLNKLTQEIAFEPHKDNNWTRSLPRLRQFADKQK 218
>gi|240950437|ref|ZP_04754688.1| putative anti-repressor protein [Actinobacillus minor NM305]
gi|240295057|gb|EER45913.1| putative anti-repressor protein [Actinobacillus minor NM305]
Length = 211
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 1 MST---ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
MS ++ F FE++ IRTI +++ WF+AKDV A+ N +AI +
Sbjct: 1 MSQSTQLSTFNFETHAIRTIAINNES-WFIAKDVCEAVNISNYRDAIERLDEDEKGVALT 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAP 112
T GG Q++ IISE +Y L+++ + +F +WV EVLP +RKTG YS
Sbjct: 60 DTLGGQQEMNIISESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPQIRKTGQYSQNVA 119
Query: 113 KLRATSAS---TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK--- 166
++ V+ H+ E++AK L + K + D I+
Sbjct: 120 QITPAEPEPKPDVVIPHEKAEQIAK--YLVRARAFAKEVEVFHRKMYEDLGIPRYIRNDI 177
Query: 167 ----HLPSSDNDEYLT--ITQIGERLNPPQRARF 194
H + + + ++ I Q+ +LN + A+F
Sbjct: 178 AAKGHDIACEFNYWIDPFIHQVLPQLNQQRLAKF 211
>gi|326559977|gb|EGE10374.1| BRO family protein [Moraxella catarrhalis 7169]
gi|326569705|gb|EGE19757.1| BRO family protein [Moraxella catarrhalis BC1]
Length = 294
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 2 STITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKT 59
+ I+ F FES ++RT + +IWF DVA L +NS + + K ++ T
Sbjct: 3 TQISIFNFESTKQVRTAIRDGGDIWFCLPDVAGILAIKNSRDIVAKQLDKKGVEKIYTPT 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
GG Q++ I+EP++YR++ +S A KF+ WVF+EVLPT+RKTG Y ++ T
Sbjct: 63 VGGQQELTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRKTGRYVAKSTVSDRTP- 121
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ + + L + GL VN+ + G ++ +D+ LP +
Sbjct: 122 -----LRQAVSMLVSRCGLDYGTAYTMVNQYM----GTQHIDEIDLADLPRA 164
>gi|237746236|ref|ZP_04576716.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377587|gb|EEO27678.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 268
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV 66
F F++ +R I +++ +IWF+A DV A+ E I + +T GG Q++
Sbjct: 60 FNFDNFPVRAI-NRNGDIWFIAADVCAAIDIG--TEQIRRLDDDEKGLHLTQTPGGKQEM 116
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
II+E +Y L+++S P A++F +WV EVLP +RKTG Y+V +
Sbjct: 117 SIINESGLYALILRSRKPEAKRFRKWVTSEVLPAIRKTGKYAVNS 161
>gi|269122504|ref|YP_003310681.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
gi|268616382|gb|ACZ10750.1| prophage antirepressor [Sebaldella termitidis ATCC 33386]
Length = 245
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + + ++ VD+ +WF A +VA LGY+N ++AI HCK GV R +
Sbjct: 1 MNNLIVKNEKFGQLEIYVDEKGKVWFPATEVAEMLGYKNPHKAILDHCKEHGVTFREVIA 60
Query: 59 TEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G QK + I E +V+RL+ KS +P A++FE W+F+E +P + KTG Y ++APK +
Sbjct: 61 NTGFGDSKQKKKYIDEGNVFRLITKSHIPGAEEFESWIFDEAIPQIMKTGKYEIKAPKNK 120
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
L+ + + +N L R V ++L DI LPSS+
Sbjct: 121 ILDQEIKLK-NSRSRMANAYLKIANNTALPNEYRQVMLTYAANELSGTDILPLPSSEKRT 179
Query: 176 YLTITQIGERLNPPQ 190
+ T T+IGE+L
Sbjct: 180 F-TATEIGEKLGISA 193
>gi|226940701|ref|YP_002795775.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
gi|226715628|gb|ACO74766.1| Phage associated-antirepressor [Laribacter hongkongensis HLHK9]
Length = 214
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK 65
F FES+ +RTI +D IWFV DV AL + +A + ++ Q
Sbjct: 16 VFSFESHSVRTI-YRDGEIWFVLNDVTEALAFSRGRDAARMLDDDERGAHIVRVSSNNQH 74
Query: 66 --------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
V I++E +Y L+++S P A++F++WV EVLP +RKTG+YS
Sbjct: 75 ESFDREVEVTIVNESGLYSLILRSRKPEAKRFKKWVTSEVLPAIRKTGAYS 125
>gi|167465069|ref|ZP_02330158.1| BRO-like protein [Paenibacillus larvae subsp. larvae BRL-230010]
Length = 109
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KT 59
M+ + F F +R I+ K WFV KDV + L N V+ Y + +
Sbjct: 1 MNQLQVFNFTGKDVRMIM-KGGQPWFVLKDVCSILELSNPRMVKERLSDDVSSTYSIPDS 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G +Q II+E +Y ++++S A++F +WV +VLP++RKTG Y+
Sbjct: 60 LGRLQPTTIINEDGLYDVILESRKSEAREFRKWVTRDVLPSIRKTGMYAA 109
>gi|326562741|gb|EGE13040.1| BRO family protein [Moraxella catarrhalis 103P14B1]
Length = 150
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I+ F FES ++RT + +IWF DVA L N+N + + + +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISY 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y ++ T
Sbjct: 61 ESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGRYVAKSTVSDRTP- 119
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
+ + + L + GL VN+ +
Sbjct: 120 -----LRQAVSMLVSRCGLDYGTAYTMVNQYMETQ 149
>gi|317487300|ref|ZP_07946095.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921490|gb|EFV42781.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 269
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 93/212 (43%), Gaps = 29/212 (13%)
Query: 3 TITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----RYP 56
I F +R +V+ WFVA DVA ALGY N EA HCK V K +
Sbjct: 4 QIQVFRNGAFGSVR-VVEHKGEPWFVASDVAKALGYANPQEATREHCKKVNKITQPSKSL 62
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ + II E DVYRL+++S LP A +F+ WV EEV+PT+RK+G Y P
Sbjct: 63 TSVKRPPTFINIIPESDVYRLVMRSNLPGAVEFQDWVCEEVIPTIRKSGGYLATKPDDTP 122
Query: 117 TS--ASTVLRVHKHLE--ELAKQAGLKDNQLL---------------LKVNRGVTKITGV 157
+ A VL L+ E + L+ + + + + G+
Sbjct: 123 ETILARAVLIAQDTLKRVEAERDEALRTKAWIGSRREATAMATAASATRRAKALEAQLGL 182
Query: 158 --DQLEAMDIKHLPSS-DNDEYLTITQIGERL 186
D L IK LP D + T +QIG+ L
Sbjct: 183 AGDYLAVKGIKWLPEIFDLTKGGTYSQIGKYL 214
>gi|66394686|ref|YP_240864.1| ORF016 [Staphylococcus phage X2]
gi|62636910|gb|AAX92021.1| ORF016 [Staphylococcus phage X2]
Length = 235
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M + F F+ +RT+ + + +FV KD+A LGY ++ AI H K +
Sbjct: 1 MQALQTFNFKELPVRTV-EIENEPYFVGKDIAEILGYARTDNAIRNHVDSEDKLTHQFSA 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPS--------AQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + II+E +Y L+ ++ S A+KF+RWV EVLP+LR+TG+Y
Sbjct: 60 SGQNRNMIIINESGLYSLIFDASKQSKNENIRETARKFKRWVTSEVLPSLRRTGTYQ-SK 118
Query: 112 PKLRATSASTVLRVHKHLEELAKQ 135
P + + + + L+E +
Sbjct: 119 PLTTSEQIQLIAQGNTELDERVTK 142
>gi|255066414|ref|ZP_05318269.1| toxin-antitoxin system, toxin component, Bro family [Neisseria
sicca ATCC 29256]
gi|255049294|gb|EET44758.1| toxin-antitoxin system, toxin component, Bro family [Neisseria
sicca ATCC 29256]
Length = 323
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKT 59
M+ + F F +++R + + F DVA L +N+ + N GV K Y
Sbjct: 1 MNQVQHFNFNQSQVR-VEMHNGEPLFCLTDVAQILEIQNTKSSRFNLKEDGVHKMYLTDK 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY---SVEAPKLRA 116
G Q+ ISEP++YR++ +S A KF+ W+FEEV+PT+RKTG Y S + K +
Sbjct: 60 LGRNQEATFISEPNLYRVIFRSNKAEAIKFQDWIFEEVIPTIRKTGGYQAKSTPSVKDQL 119
Query: 117 TSASTVLRVHKHLEELAKQA-----GLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
+ +++V L + ++ G D+ L K N+ + T + + + H
Sbjct: 120 PTRDELIQVIYMLGDRLREIHGWGWGNFDDHLSGKFNKTPRESTYDELVNIIRWLH 175
>gi|320120505|gb|ADW16170.1| hypothetical protein HMPREF0389_01726 [Filifactor alocis ATCC
35896]
Length = 114
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH----CKGVAKRYP 56
MS++ FE T+++KD +F+ K+VA LGY N+ +A+ H KGV K
Sbjct: 1 MSSLITFENMEFGKLTVMEKDGEFFFIGKEVAEKLGYSNTRDALVRHIAEEDKGVVKH-- 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
T GG Q II+E +Y L++ S LP A+ F+RWV EVLP++RK G Y K
Sbjct: 59 -DTLGGRQSFTIINESGLYSLILSSKLPQAKDFKRWVTTEVLPSIRKNGGYIKNQKK 114
>gi|293394090|ref|ZP_06638393.1| phage antirepressor protein [Serratia odorifera DSM 4582]
gi|291423452|gb|EFE96678.1| phage antirepressor protein [Serratia odorifera DSM 4582]
Length = 274
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 1 MS-TITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK 53
MS I F+F+S+ +R+++ + Q WF+A DV ALG ++++A+NA K
Sbjct: 1 MSHVIKTFDFKSSTGELLASVRSVLIE-QAPWFIAIDVCEALGLSHTHKALNA-VDDEDK 58
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
R G +K +++E +Y L++KS P A++F+RW+ EVLP++R TGSYS+ P
Sbjct: 59 REQEDYSGSGRKPLLVNESGLYSLIIKSRKPQAKRFKRWITSEVLPSIRATGSYSL-VPS 117
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ + + E K L + V R I ++ L A I
Sbjct: 118 SNLPNFDDPIAAAEAWIETKKAERL----AVGYVQRQAKYINHLENLIAGGISPYEFCKQ 173
Query: 174 DEYLTITQIGERLNPP 189
+ + QI L
Sbjct: 174 FNGVNVRQINAFLEDH 189
>gi|293410709|ref|ZP_06654285.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471177|gb|EFF13661.1| conserved hypothetical protein [Escherichia coli B354]
Length = 314
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 21/270 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ T F+F ++IR +++K + WFVAKDV AL NS +A+ A T G
Sbjct: 31 NDFTIFKFGDSEIR-VINKCGDPWFVAKDVCDALTLTNSRKALTALDDDEKGVTLSYTLG 89
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q + I+SE +Y L+++ + KF +WV EVLP++RK G Y K +
Sbjct: 90 GEQNLSIVSESGMYTLVLRCRDAVNKGSVPHKFRKWVTAEVLPSIRKHGEYV----KGKK 145
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN--- 173
T+ + + L + GL+ + V++ G+D ++ + I+ +P +
Sbjct: 146 TTVEERTPLRDAVNMLVGKKGLRYDDAYNMVHQRF----GIDSIDELSIEQIPLAVEYIH 201
Query: 174 ---DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
E I + ++ N A+ N L+ + P ++
Sbjct: 202 RVVLEGEFIGKQEKKTNE-LSAKEANSLVWLWDYANRSQALFRELYPALKQIQSNYSGRC 260
Query: 231 MQHVEGSTQQLKWNSNLLVSFLQNELINTP 260
+ + + ++L++ ++ IN P
Sbjct: 261 YDYGHEFSYVIGMARDVLINHTRDVDINEP 290
>gi|117530195|ref|YP_851038.1| prophage antirepressor [Microcystis phage Ma-LMM01]
gi|117165807|dbj|BAF36115.1| prophage antirepressor [Microcystis phage Ma-LMM01]
Length = 270
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPLK 58
+ + F F + +IR I+ D WF+A DV L + N++ A+ + K +
Sbjct: 6 TQLPTFNFNNQEIRVII-IDNEPWFIAADVCAVLEHTNTSVALLRLKVYEKQLVDPKQYL 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q + ISE +YRL++ S P A+ F+ WV +EVLPT+RKTG YSV K+ T
Sbjct: 65 GSVSNQYISAISESGLYRLVLSSRKPQAELFQDWVVQEVLPTIRKTGRYSVSDFKIPTTY 124
Query: 119 ASTVLRVHKHLEELAK--------QAGLKDNQLLLKVNRGVT 152
+L + EL + A L++ L+K+ +T
Sbjct: 125 GEALLEAGRLALELEQTNVTLEQVNATLEEQAPLVKLAETLT 166
>gi|225374560|ref|ZP_03751781.1| hypothetical protein ROSEINA2194_00175 [Roseburia inulinivorans DSM
16841]
gi|257438076|ref|ZP_05613831.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
gi|225213620|gb|EEG95974.1| hypothetical protein ROSEINA2194_00175 [Roseburia inulinivorans DSM
16841]
gi|257199407|gb|EEU97691.1| toxin-antitoxin system, toxin component, Bro family
[Faecalibacterium prausnitzii A2-165]
Length = 276
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 30/251 (11%)
Query: 4 ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-------VAKRY 55
+ FE E IR ++ + +F A DVA ALGY N A+ HC+G V ++
Sbjct: 24 MEVFENQEFGSIR-VLQEAGKTFFCASDVAKALGYVNPYAAVKRHCRGPLTKREGVVQKV 82
Query: 56 PLKTEGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ G Q ++ I+E DVYRL+V S LPSA++FE WVF+EVLP++RK G Y ++
Sbjct: 83 NQYGDAGEQVVEISFITEGDVYRLIVHSKLPSAERFEHWVFDEVLPSIRKHGVYMSDSIL 142
Query: 114 LRATSASTVLR--VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ V+ + + E + G++ +D +
Sbjct: 143 DQVIQHPEVIYTLAQELVAEREQLEGIRKQ---------------LDAAQPKADYFDTFV 187
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
++++ I + + P++ LLL SG P RG +
Sbjct: 188 NSEDCTCIRNFCKEIGIPEKTAVA--LLLDHRYLYRSPSGWLMPFADKSARGYFIVRDCY 245
Query: 232 QHVEGSTQQLK 242
QQ +
Sbjct: 246 GRSGKLVQQTR 256
>gi|237795001|ref|YP_002862553.1| antirepressor, phage associated [Clostridium botulinum Ba4 str.
657]
gi|229261612|gb|ACQ52645.1| antirepressor, phage associated [Clostridium botulinum Ba4 str.
657]
Length = 246
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 98/244 (40%), Gaps = 15/244 (6%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPL 57
M+ + F E +RTI ++ IWFV KDVA LGYE +AI K
Sbjct: 1 MNNLQIFNNQEFGLVRTIQKEN-AIWFVGKDVAKCLGYERPTKAIQDRVDNEDKDEVPIQ 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLR 115
+ G Q II+E +Y L++ S L +A+KF+RWV EVLP +R+TG Y E
Sbjct: 60 DSIGRNQNTPIINESGLYSLVLSSKLSTAKKFKRWVTSEVLPQIRQTGGYIPQNENETEE 119
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
A +L K +E K +++ + L+ V T + L ++ L S E
Sbjct: 120 DILAKAILIAQKTIE--KKNRIIEEQKPLVSFANKVA--TSQNSLLVREVAKLAS---KE 172
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ I + +RL R L Q G + E V
Sbjct: 173 GINIGE--KRLWNKLREWGLIFKNTTEPKQYGIDRGYFEVVEGTRENKTGTFIYKTTRVT 230
Query: 236 GSTQ 239
G Q
Sbjct: 231 GKGQ 234
>gi|134287387|ref|YP_001110770.1| putative antirepressor [Clostridium phage phiC2]
gi|93117225|gb|ABE99515.1| putative antirepressor [Clostridium phage phiC2]
Length = 212
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + FE E +IR + + D +FV KD+A +LGY+N+N+AI HCKGV K K
Sbjct: 1 MNNLQIFEKMEFGQIR-MAEIDNKPYFVGKDIAKSLGYKNTNDAILRHCKGVVKHEGFKI 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G K+ +I+E DVYRL+V S LP+A+KFE WVF+EVLPT+R+TG Y +
Sbjct: 60 NG--IKIALITEGDVYRLIVGSNLPNAEKFESWVFDEVLPTIRQTGQYQAQQ 109
>gi|256833346|ref|YP_003162073.1| phage antirepressor protein [Jonesia denitrificans DSM 20603]
gi|256686877|gb|ACV09770.1| phage antirepressor protein [Jonesia denitrificans DSM 20603]
Length = 244
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+++ PF + + +IRTI+ D+ F+ +D+ AL S+ A+ + + T
Sbjct: 1 MTSLQPFVYGTQEIRTIMVNDEPA-FITRDLLEALDLNRSSIAL--LDDDEKGVHTVYTP 57
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV------EAPKL 114
GG+Q++ ++E +Y L++KS P A+ F+RW+ EVLP +R+TG Y++ EA +
Sbjct: 58 GGMQEMGYVTEAGMYSLVLKSRKPEAKAFKRWITHEVLPQIRRTGGYTMAPRSYAEALRA 117
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI--KHLPSSD 172
A + + A + D+ + + ++ + + +DI L
Sbjct: 118 LADVEERKELLESEAKANAPKVLFADSVAASQSTILIGELAKILRGNGVDIGQNRLYEQL 177
Query: 173 NDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVS-----KVSGGYRPTPKGEER 222
++ I + G N P Q+A L +K ++ + T KG+E
Sbjct: 178 REDGFLINRRGSDWNMPTQKAMDLELFRIKETAISHSDGHISINKTTKVTGKGQEY 233
>gi|148826895|ref|YP_001291648.1| putative antirepressor protein [Haemophilus influenzae PittGG]
gi|148718137|gb|ABQ99264.1| putative antirepressor protein [Haemophilus influenzae PittGG]
Length = 284
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-- 60
++ F FE++ IR +V +Q WFVAKD+ LG N ++AI K +
Sbjct: 7 QLSTFNFENHSIRALVINNQ-PWFVAKDLCDTLGITNPSKAILNLDDDE-KMISTDSNLK 64
Query: 61 -----GGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVE 110
G Q + ++SE +Y L+++ + +F +WV EVLPT+RKTG Y ++
Sbjct: 65 LGSAGNGAQSLALVSESGMYTLILRCRDAVKKGSIPHRFRKWVTSEVLPTIRKTGKYQLQ 124
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ LR + L + GL + +V + + + GV+ ++ + + L
Sbjct: 125 PQQKTTVDDRAGLR--NAISFLVNKKGL----IYSEVYQLIHQQFGVEHIDELSQEQLSQ 178
Query: 171 S 171
+
Sbjct: 179 A 179
>gi|284009362|emb|CBA76554.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 252
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 1 MS-TITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYPL 57
M+ + F F + +R + + WF DV AL NS++ ++ K ++ L
Sbjct: 1 MNTQLRSFYFNNIYDVR-VQIINSEPWFCLNDVCKALTVINSSDLLSKQLDKAGVEKIYL 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+++G ++ ++EP++YR++ +S A++F+ WVF EVLP++RKTG Y P +A+
Sbjct: 60 RSDGQRRQFAFVNEPNLYRVIFRSNKLEAKQFQDWVFNEVLPSIRKTGKYEHPQPHPKAS 119
Query: 118 S--ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ + R HL + V + ++TG E + H+P DE
Sbjct: 120 ERFSHSDTRNLTHLVWCMTNGFRFERSWSNAVWLALREVTGTASPERFQVAHIPLM-ADE 178
Query: 176 YLTITQIGERLNPPQRARF---LNKLLLKR 202
I I E L+ + +LL KR
Sbjct: 179 CRRIYYITESLHQIINDAEKQVIKRLLRKR 208
>gi|307243557|ref|ZP_07525704.1| toxin-antitoxin system, toxin component, Bro family
[Peptostreptococcus stomatis DSM 17678]
gi|306493057|gb|EFM65063.1| toxin-antitoxin system, toxin component, Bro family
[Peptostreptococcus stomatis DSM 17678]
Length = 240
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ + F+ E ++R+++ + +NIWFV KDVA LGY N+ +AI H K +
Sbjct: 3 NDLMVFQSQEFGEVRSVIIE-ENIWFVGKDVAQILGYSNTRKAIIDHIDEDDKNTVTIRD 61
Query: 61 G--GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
G G II+E +Y L++ S LP+A+KF+RWV EVLP +RK G Y + +
Sbjct: 62 GIKGNPNQVIINESGLYSLILSSKLPNAKKFKRWVTSEVLPAIRKQGFYMQDGLSKEVQA 121
Query: 119 ASTVLRVHKHL-EELAK----QAGLKDNQLLLKV 147
+ R + L +E++ K+N L V
Sbjct: 122 IFHLDRQQQKLIKEISDINNSVTEFKENMPLFAV 155
>gi|307150782|ref|YP_003886166.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306981010|gb|ADN12891.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 230
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 15/199 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS + F FE+ K+R + DQ W +A+DV L ++ + Y + T
Sbjct: 1 MSDLIVFGFENQKVRCVGTPDQPEW-IAQDVCDVLSVGLASNTLRNFDFDEKGMYSIHTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q++ ++EP +YRL+ KS A++F+RW+F EVLP+LR+TGSYS++ + +
Sbjct: 60 GGEQEMLTVTEPGLYRLIFKSRKAVAKRFQRWIFHEVLPSLRRTGSYSIQ----QNQQSP 115
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL-EAMDIKHLPSSDNDEYLTI 179
L V + + E+ N+L++ ++ + + + E ++ LP + +
Sbjct: 116 KALIVARAINEI--------NELVVDISPRLAQYLIDHTISEVLEQTALPGTTEI-LRGV 166
Query: 180 TQIGERLNPPQRARFLNKL 198
+I E + P A+ ++L
Sbjct: 167 VEIAEEMGLPVNAQNRSQL 185
>gi|255957559|dbj|BAH96620.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957564|dbj|BAH96624.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957569|dbj|BAH96628.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957574|dbj|BAH96632.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957579|dbj|BAH96636.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957584|dbj|BAH96640.1| hypothetical protein [Candidatus Liberibacter asiaticus]
gi|255957594|dbj|BAH96648.1| hypothetical protein [Candidatus Liberibacter asiaticus]
Length = 100
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 87/100 (87%), Positives = 93/100 (93%)
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
MDIKHLPSSDNDEYLT+T+IGERLNPP AR LNKLLL+ G Q++ + GGYRPTPKGEER
Sbjct: 1 MDIKHLPSSDNDEYLTVTEIGERLNPPFSARCLNKLLLQLGFQINNLLGGYRPTPKGEER 60
Query: 223 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 262
GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL
Sbjct: 61 GGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTPRL 100
>gi|319776454|ref|YP_004138942.1| putative antirepressor protein [Haemophilus influenzae F3047]
gi|329123939|ref|ZP_08252491.1| antirepressor protein Ant [Haemophilus aegyptius ATCC 11116]
gi|317451045|emb|CBY87276.1| Putative antirepressor protein [Haemophilus influenzae F3047]
gi|327468134|gb|EGF13621.1| antirepressor protein Ant [Haemophilus aegyptius ATCC 11116]
Length = 289
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 1 MST---ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
MS ++ F FES IRT+ + WFVAKDV A+G +N+ +A+ A +
Sbjct: 1 MSNQTQLSTFNFESKSIRTLAINN-EPWFVAKDVCDAIGIDNNRKALLALDEDEKGVTLS 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAP 112
T GG Q++ IISE +Y L+++ + +F +WV EVL T+RKTG Y +
Sbjct: 60 YTPGGQQEMNIISESGMYTLILRCRDAVKKGSIPHRFRKWVTAEVLLTIRKTGKYESK-- 117
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
TS + + + L + GL + + + V+ +E + ++ LP +
Sbjct: 118 ----TSVNDRTGLRNAVNMLVSRKGL----IYSDAYHLIHQRFNVESIEDLTLEQLPQAV 169
Query: 173 NDEYLTI 179
+ I
Sbjct: 170 EYVHRII 176
>gi|145636030|ref|ZP_01791706.1| putative antirepressor protein [Haemophilus influenzae PittAA]
gi|145266718|gb|EDK06746.1| putative antirepressor protein [Haemophilus influenzae PittAA]
Length = 149
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
++ F FESN IRT+ + WFVAKDV A+G NS ++ A + + T G
Sbjct: 6 QLSTFNFESNSIRTLAINN-EPWFVAKDVCDAIGLTNSRISLIALDEDEKGVSLIYTPSG 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
Q+V IISE +Y L+++ + +F +WV EVLPT+RKTG Y + T
Sbjct: 65 QQEVNIISESGMYTLILRCRDAVKKGSIPHRFRKWVTAEVLPTIRKTGKYESKTSVNDRT 124
Query: 118 SASTVLRVH 126
+ +
Sbjct: 125 GLRNAVNML 133
>gi|307153658|ref|YP_003889042.1| prophage antirepressor [Cyanothece sp. PCC 7822]
gi|306983886|gb|ADN15767.1| prophage antirepressor [Cyanothece sp. PCC 7822]
Length = 216
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS +T F FE ++R + D+ W +A+DV LG E + + + + T
Sbjct: 1 MSNLTIFTFEEQQVRFVGTADKPEW-IAQDVCNVLGIEEPSSVLRNFDPDEKGVHLMHTP 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q + ++E +YRL+ +S P A+KF+RW+ +EV+P++R+TGSY+V A
Sbjct: 60 GGKQSMLTVTEFGLYRLIFRSNKPIAKKFQRWIIQEVIPSIRRTGSYTVPGVNPEAQRLE 119
Query: 121 TVLRVHKHLEELAKQAGLK 139
+ ++L+ + ++
Sbjct: 120 KLELEVENLKLKLELVKIQ 138
>gi|85059215|ref|YP_454917.1| hypothetical protein SG1237 [Sodalis glossinidius str. 'morsitans']
gi|84779735|dbj|BAE74512.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 215
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ITPF FE + +RT+V D WF A DV +AL +N ++A+ + L +G
Sbjct: 5 SITPFTFEDHLVRTVVIND-EPWFFAVDVYSALDIQNPSKALKILDSNERSNFKLGRQG- 62
Query: 63 IQKVRIISEPDVYRLLVKST-------LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
IISE ++ L+++ LP +F +WV EVLP++RKTG Y K
Sbjct: 63 --DANIISESGMFTLVLRCRYAVKQDTLP--HRFRKWVTSEVLPSIRKTGKYEHRVYKPE 118
Query: 116 ------ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
A AS + R+ H+ + N + + ++TG+ M+++H+P
Sbjct: 119 SHELFTANDASNLARLIWHMSHNFRFKQAWSNGIWYN----LREVTGIPSPHPMEVRHIP 174
Query: 170 SSDNDE---YLTITQIGERLNPPQRARFLNKLLLKR 202
+ + I ++ + +R R + +L+ KR
Sbjct: 175 HITRECERIWAVIERLQSAMVEAER-RTIRQLVRKR 209
>gi|331648162|ref|ZP_08349252.1| putative BRO family, N- domain protein [Escherichia coli M605]
gi|331043022|gb|EGI15162.1| putative BRO family, N- domain protein [Escherichia coli M605]
Length = 231
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV + WF+A DV A+G N +A+ T GG
Sbjct: 8 SIFSFESQADIRVIV-INGEPWFIASDVCRAIGIANHRDAVRKLDDDEKGVASTDTPGGE 66
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q+ IISE +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 67 QESIIISESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 123 EERIKMVADQVANATASAVMQAMKIENKTYSA 154
>gi|117624697|ref|YP_853610.1| putative anti-repressor protein [Escherichia coli APEC O1]
gi|115513821|gb|ABJ01896.1| putative anti-repressor protein [Escherichia coli APEC O1]
Length = 231
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV + WF+A DV A+G N +A+ T GG
Sbjct: 8 SIFSFESQADIRVIV-INGEPWFIASDVCRAIGIANHRDAVRKLDDDEKGVASTDTPGGE 66
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q+ IISE +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 67 QESIIISESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 123 EERIKMVADQVANATASAVMQAMKIENKTYSA 154
>gi|89152443|ref|YP_512277.1| putative anti-immunity protein [Escherichia phage phiV10]
gi|74055466|gb|AAZ95915.1| putative anti-immunity protein [Escherichia phage phiV10]
Length = 194
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV + WF+A DV A+G N +A+ T GG
Sbjct: 8 SIFSFESQADIRVIV-INGEPWFIASDVCRAIGIANHRDAVRKLDDDEKGVASTDTPGGE 66
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q+ IISE +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 67 QESIIISESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 123 EERIKMVADQVANATASAVMQAMKIENKTYSA 154
>gi|167746117|ref|ZP_02418244.1| hypothetical protein ANACAC_00813 [Anaerostipes caccae DSM 14662]
gi|167654632|gb|EDR98761.1| hypothetical protein ANACAC_00813 [Anaerostipes caccae DSM 14662]
Length = 232
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YPLK 58
M + FE E ++RT+ + WFV KDVATALGY + A+ H K+
Sbjct: 1 MKDLMIFENVEFGQMRTVTINN-EPWFVGKDVATALGYADYFGALKKHVDLEDKQNCQNN 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ + + +I+E +Y L+ S L SA+KF+ WV EVLP+LRKTGSY + K +T
Sbjct: 60 SFDSPRGMTVINESGLYALIFGSKLESAKKFKHWVTSEVLPSLRKTGSYEM---KNYSTE 116
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+L + + ++ + +N +++ + +T V+++
Sbjct: 117 MKAILMHDEKIVKIDGRVTDLENNMVIDYGQQLTLRNEVNKV 158
>gi|37527835|ref|NP_931180.1| hypothetical protein plu3980 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787271|emb|CAE16352.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 190
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
++TPF FE+ ++RT++ K+ N WFVA+DV AL NS EAI T GG
Sbjct: 5 SVTPFIFENQQVRTLI-KNGNFWFVAQDVCDALKITNSREAIAKLGDDEKDVALSDTLGG 63
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSY 107
QKV II+E +Y L ++ + +F +WV EVLP +RKTGSY
Sbjct: 64 EQKVNIINESGMYFLTIRCRDAVKKGTLPHRFRKWVTSEVLPLIRKTGSY 113
>gi|71900920|ref|ZP_00683035.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71729332|gb|EAO31448.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 202
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 1 MS--TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
MS ++ PF FE++ +R ++ + WFVAKD+ L NS A+ A +
Sbjct: 1 MSVPSVIPFSFENHPVR-VLIINGEPWFVAKDLCAVLHIVNSRSALIALDETEKGVGSTD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPK 113
T GG Q++ I++E ++ L+++ P + +W+ EVLP++RKTGSY+
Sbjct: 60 TLGGQQELAIVNESGMWTLVLRCRDAVKPGTVPYRVRKWITGEVLPSIRKTGSYTATGTM 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + + + H ++L + + + K Q L G T+I+G
Sbjct: 120 VNDDALCAIWFLCDHFKKLHEMSRVNKVPQALY--WLGATEISG 161
>gi|306828127|ref|ZP_07461390.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
gi|304429664|gb|EFM32710.1| phage antirepressor protein [Streptococcus pyogenes ATCC 10782]
Length = 247
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ I F F K+RT+ + +FV KDVA LGY ++ AI +H K +
Sbjct: 1 MNEI--FNFNGQKVRTLTINN-EPYFVGKDVADILGYARADNAIRSHVDDEDKLMHQFSA 57
Query: 60 EGGIQKVRIISEPDVYRLLVKST--------LPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + I++E VY L+ + AQKF+RWV EVLP +RK G+Y E
Sbjct: 58 SGQNRDMTIVNESGVYNLIFAAAKQSANPEIKEKAQKFKRWVTSEVLPQIRKQGAYVPEN 117
Query: 112 PKLRATSA---STVLRVHKHLEELAKQAGLKDNQLL 144
A A K LE LK+ Q +
Sbjct: 118 LSDEAFIALFTGQKKLKQKQLELAQDVDYLKNEQPI 153
>gi|303237921|ref|ZP_07324473.1| BRO family, N-terminal domain protein [Prevotella disiens
FB035-09AN]
gi|302481886|gb|EFL44929.1| BRO family, N-terminal domain protein [Prevotella disiens
FB035-09AN]
Length = 214
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 4 ITPFEFE--SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTE 60
+ F+ +IRT V ++ WFVAKDV LG +N+ +A+ + Y + T
Sbjct: 12 LQVFDNNKLGVRIRTQV-INKEPWFVAKDVCHVLGIQNARQAMAKTLDEDEKGVYTIYTL 70
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG QK+ +I+E +Y L+ +S P AQ F RWV E+LP++RKTG Y + L +
Sbjct: 71 GGAQKMNLINESGLYHLIFQSRKPKAQTFRRWVTGEILPSIRKTGRYERKRSLLPREKSE 130
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+ +EL +D + + + K
Sbjct: 131 EM---RSFFDELTHWTTPEDERTIAREMNVTQK 160
>gi|145596524|ref|YP_001160821.1| BRO domain-containing protein [Salinispora tropica CNB-440]
gi|145305861|gb|ABP56443.1| BRO domain protein domain protein [Salinispora tropica CNB-440]
Length = 284
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 96/241 (39%), Gaps = 19/241 (7%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYPLKTEG 61
IT FEF +RT+ WFV D L N + A + H ++ + G
Sbjct: 24 EITTFEFGDLPLRTVTV-GGEPWFVVADACQGLDLTNPSMAASRLHADDLSTAEVIDGMG 82
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
Q VRI +E +Y L+ +S P A+ F RWV EVLP +R TG Y P + + A
Sbjct: 83 RRQHVRITNESGLYDLIFQSRKPEARAFRRWVTHEVLPAIRATGRYE-SVPAVPQSYADA 141
Query: 122 VLRVHKHLEEL-AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
+ +L A+ A L + + + G D + S D +
Sbjct: 142 LQLAADQARQLDAQAAELAEAAPKAQSWDTLASADG--DWSVRDAAKILSRDPN------ 193
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQ 240
LN +R R L ++ + + G +RP + E G + ++P H T +
Sbjct: 194 -----LNVGER-RLFTVLGEQQWIYRQRGDGRWRPYQRAVESG-WLSELPASHYHPRTGE 246
Query: 241 L 241
L
Sbjct: 247 L 247
>gi|238898666|ref|YP_002924347.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|238899087|ref|YP_002924769.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466425|gb|ACQ68199.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466847|gb|ACQ68621.1| putative phage antirepressor [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 256
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 15/186 (8%)
Query: 1 MST--ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+ +TPF FES IR ++ + WF+A+D+ AL +N +A+ + +
Sbjct: 1 MTNQLLTPFCFESFVIRVVIINN-ETWFIAQDICCALQIQNVTQAVERLDDDERSMFNIG 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPK 113
+G +V IISE +Y L+++ + +F +WV EVLP +RKTG Y E +
Sbjct: 60 RQG---QVNIISESGLYTLVLRCRDAVKKGTLPHRFRKWVTHEVLPQIRKTGQYLPEKYQ 116
Query: 114 LRAT---SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ + + + + + + E++ +N + + ++TG+ + +H+P
Sbjct: 117 PESPEVFNGNDLNNLARLVWEMSDGFRF-ENSWSHGIWFALRQVTGIPSPKPFQTRHIPL 175
Query: 171 SDNDEY 176
+
Sbjct: 176 IAEECV 181
>gi|317487261|ref|ZP_07946056.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316921451|gb|EFV42742.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 325
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 2 STITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAK--RY 55
S F F K+RT+ + N+WFVAKDVA LG+ + AI HC V K
Sbjct: 74 SVPGTFVFPVTRQKVRTVW-HEGNVWFVAKDVAECLGFTHPQSAIIDHCNHAKVLKGGET 132
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
PL T + + II E DVYRL+++S LP+A++F+ WV EEVLP++RKTG Y P
Sbjct: 133 PLLTSS-PRGINIIPESDVYRLVMRSKLPAAEQFQTWVCEEVLPSIRKTGGYGRVVPASP 191
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ + + E + + L ++ K D L D+ +
Sbjct: 192 TATKPQTE--DQLILEAMQVLLSRTETLKAELAEAKPKADYYDTL----------VDDRD 239
Query: 176 YLTITQIGERLNPPQRA 192
LT T+ G+ R+
Sbjct: 240 LLTFTEAGKLFGMSARS 256
>gi|257793138|ref|YP_003186535.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479830|gb|ACV60146.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 206
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVR 67
FE ++IR ++ D W+VAKDV AL NS +A++ + + G
Sbjct: 17 FEGHRIRVVMIND-EPWWVAKDVCEALQIANSRDAVSRLDEDEKNTVAITDGNRGNPNTT 75
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
II+E +Y+L S + +A++F RW+ EVLP++RKTG Y + A K
Sbjct: 76 IINEAGLYQLTFTSRVDTAKRFRRWLAHEVLPSIRKTGEYKTPGRRQECDIA------AK 129
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN 187
+ + +A + +LL+ + +E + I + + I G
Sbjct: 130 QVAVMEMKARTEQAKLLVDAVHRLEHRLSDLLIERILIASTNLMAGYDAIGIPTDGPSFT 189
Query: 188 PPQRARF 194
P R RF
Sbjct: 190 EPGRTRF 196
>gi|70731107|ref|YP_260848.1| phage protein [Pseudomonas fluorescens Pf-5]
gi|68345406|gb|AAY93012.1| probable phage protein YPO2126 [Pseudomonas fluorescens Pf-5]
Length = 294
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA--------HCKGVAK 53
+ + F F ++RT++ DQ WFVA DV +L N + A+N +
Sbjct: 6 TNVISFNFGKQQVRTLLIDDQ-PWFVAADVCVSLAIGNVSLAVNGRADRETDGLDEDEKG 64
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ T G Q++ +++E +Y L+ KS A++F++WV EVLP +RK G Y
Sbjct: 65 IATVNTPSGAQEMLVVNESGLYALIFKSRKAEAKRFKKWVTAEVLPAIRKHGRY 118
>gi|227431808|ref|ZP_03913835.1| prophage antirepressor [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352491|gb|EEJ42690.1| prophage antirepressor [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 268
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + F ++ K++ +++ + F A+ A LG + + +Y T
Sbjct: 7 MSLEVQVF--DNLKVK---EENGQVLFDAESAAIGLGITDEKSGLTYVRWNRVNKYLFAT 61
Query: 60 EG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-T 117
G +++ I+EP Y+L +K+ +A+KF+ WV EVLP +R+ G+Y + T
Sbjct: 62 SGENVKRGDFITEPQFYKLAIKANNETAEKFQDWVTSEVLPAIRQHGAYLTDQKIEEVLT 121
Query: 118 SASTVLRVHKHLEELAKQAGL----KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ T++R+ L+E +QA L +++ LL + N K VD + A N
Sbjct: 122 NPDTIIRLATELKE-ERQAKLVLKQQNSVLLQQNNELKPKADYVDSILA----------N 170
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+TIT I + A +NKLL G+Q SG + K +++G
Sbjct: 171 KSLVTITFIAKDYGMSGTA--MNKLLHDLGVQY-NQSGIWLLYAKHQKKG 217
>gi|170720501|ref|YP_001748189.1| prophage antirepressor [Pseudomonas putida W619]
gi|169758504|gb|ACA71820.1| prophage antirepressor [Pseudomonas putida W619]
Length = 256
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + PF F ++IR + D WFVAKD+A LGY + + AH + + T
Sbjct: 1 MN-LIPFNFNGHEIRVVKDHANEPWFVAKDIADDLGYSWAGTSTIAHVPEQWRGVRSVLT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q++ ++SE +Y L +S P A + WV EV+P++RKTGSY + T A
Sbjct: 60 PSGNQQMAVLSEQGLYFFLGRSDKPGALPLQMWVAGEVIPSIRKTGSY-----QRPMTPA 114
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+L + + L +Q + Q+ L+ R + T ++Q+ +D S + TI
Sbjct: 115 EQLLAQAQTMVTLERQQA--EQQVALE--RVEDRTTKLEQVRYLD------SVPSGFETI 164
Query: 180 TQIGERLN 187
T I +R+N
Sbjct: 165 TTIRDRIN 172
>gi|292491103|ref|YP_003526542.1| BRO domain protein [Nitrosococcus halophilus Nc4]
gi|291579698|gb|ADE14155.1| BRO domain protein [Nitrosococcus halophilus Nc4]
Length = 351
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 6 PFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA--HCKGVAKRYPLKTEGG 62
F+F+ S +R IV + WF +DV L + + ++ + GV K + + G
Sbjct: 112 VFQFQQSYPVRVIVLE-GEPWFCLRDVCDVLEIKQPTKVVSTQLNEDGVNKIHVTDSLGR 170
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SAST 121
Q+ ISEP++YR++ +S A++F+ WVFEEVLP +RKTG Y + S++
Sbjct: 171 NQETWFISEPNLYRVIFRSNKKEARQFQDWVFEEVLPAIRKTGRYDAHDFEPEPRLSSAQ 230
Query: 122 VLRVHKHLEELAKQAG--LKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
L + + ++ D + + + ++E M LP + + +
Sbjct: 231 RLELDQAIKHALTGLWDECSDETGRQWACNRLRVMLHLRRIEDMHPDQLPLA----FAEL 286
Query: 180 TQIGERLNPPQRARFLNKLLLKRGL 204
++ E L+ R + L R +
Sbjct: 287 ERLKEDLSAFFEYRAKERRFLCREI 311
>gi|289423917|ref|ZP_06425710.1| antirepressor [Peptostreptococcus anaerobius 653-L]
gi|289155694|gb|EFD04366.1| antirepressor [Peptostreptococcus anaerobius 653-L]
Length = 237
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLK 58
M+ + F E +RT + WF+ D+ L NS +A + GV +
Sbjct: 1 MNNVQVFNNLEFGDVRTAKIGN-KHWFMLNDICRVLEIGNSRQARTRLNQDGVITNDVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE-------A 111
+ G Q+ I+E ++Y+L+ +S P A+KF WV EVLPTLRK G+YS+ A
Sbjct: 60 SLGRTQQSTFINESNLYKLIFQSRKPQAEKFSDWVTGEVLPTLRKQGTYSMPAMSKELQA 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
+ + + ++ A ++ ++L V + V K+ G D
Sbjct: 120 ILMVDNKTEELREDFQDFKDNAPLFNIECDKLTKAVRKKVIKLIGYKSPAYRD 172
>gi|240950412|ref|ZP_04754663.1| putative antirepressor protein [Actinobacillus minor NM305]
gi|240295032|gb|EER45888.1| putative antirepressor protein [Actinobacillus minor NM305]
Length = 223
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 1 MST---ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
MS ++ F FE + IR I + WFVAKDV A+G NS A+ A
Sbjct: 1 MSQSTQLSTFNFEKSSIRVIAVNN-EPWFVAKDVCNAIGLSNSRMALLALDDDEKGVSST 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAP 112
T GG Q + I+SE +Y L+++ + +F +WV EVLP +RKTG Y V
Sbjct: 60 YTLGGEQDLAIVSESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPQIRKTGRYQVSEK 119
Query: 113 KLRATSA 119
Sbjct: 120 SQPKEQE 126
>gi|218666564|ref|YP_002425473.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218518777|gb|ACK79363.1| BRO family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 211
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK 65
F+F S ++RT+ D+D +WF A DVA AL Y ++ + + + ++T GG Q+
Sbjct: 19 VFQFHSTEVRTV-DRDGQVWF-AGDVAKALNYADAVQMTRVLDEDEKGLHTMQTLGGNQQ 76
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
V ++SE +Y L+KS P A+ F RWV EVLP +R+ G+ SV A ++ T +
Sbjct: 77 VVVLSESGLYHALLKSRKPEARPFRRWVTAEVLPAIRRNGTSSVAAAQIPDALQKTRYLL 136
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGER 185
+ + ++ L + +L ++ T + + +I LP + + ++ E+
Sbjct: 137 TVYADGRSQITPLPQDAAVLSAKNKISMSTLMREFIPSEI--LPDLMHIGLDRLARMAEQ 194
>gi|296113177|ref|YP_003627115.1| BRO family protein [Moraxella catarrhalis RH4]
gi|295920871|gb|ADG61222.1| BRO family protein [Moraxella catarrhalis RH4]
Length = 263
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I+ F FES ++RT + +IWF DVA L N+N + + + +
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANILAISNANPSRFNLSEAGVHKMYISY 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
E G ++V I+EP++YR++ +S A KF+ WVF+EVLP +RKTG Y
Sbjct: 61 ESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPAIRKTGQY 108
>gi|167034396|ref|YP_001669627.1| prophage antirepressor [Pseudomonas putida GB-1]
gi|166860884|gb|ABY99291.1| prophage antirepressor [Pseudomonas putida GB-1]
Length = 284
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S++TPF+F +R + D WFVA DV LG N+ +A+ A + + + +G
Sbjct: 9 SSVTPFDFRGYSVRAVT-IDGEPWFVAADVCRVLGVTNTTQAMQALDEDERSMFNIGRQG 67
Query: 62 GIQKVRIISEPDVYRLLVKST-------LPSAQKFERWVFEEVLPTLRKTGSY 107
+++E +Y L+++S P A F +WV EVLP++RKTG+Y
Sbjct: 68 SA---NLVNESGLYTLILRSRDAVKKGSKPHA--FRKWVTAEVLPSIRKTGAY 115
>gi|255103042|ref|ZP_05332019.1| prophage antirepressor [Clostridium difficile QCD-63q42]
Length = 108
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 2 STITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ + F + +IRT+ + D ++FVA D+A LGY+++ AI HCK V K + +
Sbjct: 3 NNLQIFKNNDFGEIRTV-EIDGKLYFVATDIARCLGYKDTTNAIKQHCKWVVKHHIPHPQ 61
Query: 61 GGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ +V +I D+YRL+ S LPSA+KFERWVF+EVLP++RKTG
Sbjct: 62 SKTKTLEVNVIPAGDMYRLITNSELPSAEKFERWVFDEVLPSIRKTG 108
>gi|301170323|emb|CBW29929.1| unnamed protein product [Haemophilus influenzae 10810]
Length = 209
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS +T F+FE+ ++TIV+ + I+F A +A L Y+N ++AI H + KR +
Sbjct: 1 MSNLTIFKFENAPVQTIVENN-EIFFRAAQLAELLQYKNPHKAIKDHVDPDDLTKREVVN 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T +V ++E +Y L++ S L A+K +RWV EVLP +RKTG Y ++ +L
Sbjct: 60 TINKRAQVLFVNESGMYSLVLSSKLEQAKKVKRWVTSEVLPAIRKTGKYQLQPQQLALPE 119
Query: 119 ASTVLRVHKHLE 130
E
Sbjct: 120 PEKFTHELTEFE 131
>gi|317165032|gb|ADV08573.1| putative phage associated protein [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 278
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + T+A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPK----TTADD 115
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY---LT 178
+ + + L + G+ + +++ V+ +E + LP + + L
Sbjct: 116 RTGLRRAVAALVGRKGIDYSSAYSMIHQRF----NVESVEDLPAGKLPEAVAYVHALTLH 171
Query: 179 ITQIGERLNPPQRAR 193
GE L+ P +A
Sbjct: 172 TGLTGEVLDAPPKAE 186
>gi|226363417|ref|YP_002781199.1| hypothetical protein ROP_40070 [Rhodococcus opacus B4]
gi|226241906|dbj|BAH52254.1| hypothetical protein [Rhodococcus opacus B4]
Length = 266
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 21/214 (9%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
+ N+ R D F DV T L NS +A+ + T GG Q++ ++
Sbjct: 17 DGNQFRVFGSID-TPQFALADVCTILEIRNSRDAVGRLDRKDVGSTDTLTAGGRQQITVV 75
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
+E +Y L+ +S P A++F RW+ EVLP++R+TGSY V L + + + +
Sbjct: 76 NESGLYELIFQSRKPEAKRFRRWITTEVLPSIRRTGSYGVPTLDLSSLGPTERAFLAQM- 134
Query: 130 EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP 189
+ L L ++ D + + I + +
Sbjct: 135 ----------NQGLQLALDSAEKNQRKADAFDTF-------LNGKGCYLIDTVANLIGAK 177
Query: 190 QRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
RA L LL + +SK S +P + G
Sbjct: 178 HRA--LWSLLYDERVLISKGSRRRQPYANTKFDG 209
>gi|262043547|ref|ZP_06016660.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039081|gb|EEW40239.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 271
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 12/199 (6%)
Query: 1 MST-ITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+T + F FES+ IR I+ D N WF A DV A+G N +A+
Sbjct: 43 MNTKPSIFNFESDSAIRAIM-IDGNPWFFASDVCRAIGIANHRDAVRKLDDDEKGVGSTD 101
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPK 113
T GG Q+ IISE +Y L+++ +F +WV EVLP +R TG Y E
Sbjct: 102 TLGGEQESVIISESGLYTLILRCRDAVTPGTIPYRFRKWVTSEVLPQIRNTGRYVRE--- 158
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ A + + + A + Q+ K D + + D + +
Sbjct: 159 -ELSQADKARMLAQEMTSSMLPAIMDALQVEQKHYTFPLNRRYQDHIHSPDGLRELAKSS 217
Query: 174 DEYLTITQIGERLNPPQRA 192
+ ++ + A
Sbjct: 218 MVMKLLRELDADGHDVSGA 236
>gi|78356784|ref|YP_388233.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219189|gb|ABB38538.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 184
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 15 RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI--QKVRIISEP 72
RTIVD++ +WFVA DV LG + +++ + K P G + + II+EP
Sbjct: 16 RTIVDENGELWFVAMDVCKHLGLK-PRDSVRYLDDDMKKHLPRTALGMKPGKPLLIINEP 74
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
+Y L+ +S P A F+ WV EEVLP++RK G+Y + P + ++++ + EL
Sbjct: 75 GLYTLIFQSRKPEAMAFQDWVCEEVLPSIRKHGAYFMMKP---TDTDESIIQKAMQIIEL 131
Query: 133 AKQ 135
A++
Sbjct: 132 ARE 134
>gi|326571054|gb|EGE21078.1| BRO family protein [Moraxella catarrhalis BC7]
Length = 279
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGV---- 51
MS I+ F FES ++RT + +IWF DVA L S++ + A K
Sbjct: 1 MSNISIFNFESTKQVRTAIRNGGDIWFCLPDVANVLEISRSSDLLQVAKPAFVKNETSSK 60
Query: 52 --------AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
+ + E G ++V I+EP++YR++ +S A KF+ WVF+EVLPT+RK
Sbjct: 61 RGALDPAGVHKMYISYESGKKQVTFINEPNLYRVIFRSNKAEAVKFQNWVFDEVLPTIRK 120
Query: 104 TGSY 107
TG Y
Sbjct: 121 TGQY 124
>gi|59801979|ref|YP_208691.1| putative phage associated protein [Neisseria gonorrhoeae FA 1090]
gi|59718874|gb|AAW90279.1| hypothetical protein, putative phage associated protein [Neisseria
gonorrhoeae FA 1090]
Length = 332
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 55 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 111
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 112 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 170
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 171 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 221
Query: 182 IGERL 186
+ L
Sbjct: 222 LHTGL 226
>gi|240113766|ref|ZP_04728256.1| putative phage associated protein [Neisseria gonorrhoeae MS11]
Length = 280
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + T+A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPK----TTADD 115
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ + + LA + + + +++ V+ +E + LP + Y+
Sbjct: 116 RTGLRRAVAALAGRKRIDYSSAYSMIHQRF----NVEAVEGIPADKLPEAV--AYVHALT 169
Query: 182 IGERL 186
+ L
Sbjct: 170 LHTGL 174
>gi|240017344|ref|ZP_04723884.1| putative phage associated protein [Neisseria gonorrhoeae FA6140]
Length = 280
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + T+A
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPK----TTADD 115
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ + + L + G+ + V++ V+ +E + LP + Y+
Sbjct: 116 RTGLRRAVSALVGRKGIDYSSAYSMVHQRF----NVESVEGIPAGKLPEAV--AYVHALT 169
Query: 182 IGERLNPPQRARF 194
+ L R
Sbjct: 170 LHTGLTGEVPDRE 182
>gi|257784359|ref|YP_003179576.1| prophage antirepressor [Atopobium parvulum DSM 20469]
gi|257472866|gb|ACV50985.1| prophage antirepressor [Atopobium parvulum DSM 20469]
Length = 269
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 16/247 (6%)
Query: 2 STITPF---EFESNKIRTIVDKDQNIWFVAKDVATALG--YENSNEAINAHCKGVAKRYP 56
++I F +F ++R + D D WF+A+DV ALG ++ +
Sbjct: 4 TSIQVFSSQQF--GELRALKDLDGEPWFIAQDVCRALGTDVKDVRSVLECDEVSNLDTIE 61
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE--APKL 114
+ + G + I+SE +Y L+++S P A+ F RWV EVLP++R++G Y +
Sbjct: 62 VYKKPGRSPL-IVSEAGLYNLVLRSRKPEAKPFRRWVTHEVLPSIRRSGGYIATDGSESN 120
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
A VL ++ ++ Q + QL K + + +D+L + +
Sbjct: 121 EDLLARAVLVANEAIQRKDAQLKEQQRQLYEKDTTIIEQGAKIDELAPKAGMYDTVINVK 180
Query: 175 EYLTITQIGE---RLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
+TIT + +P + L LL GL G PT KG E G + +
Sbjct: 181 GTMTITDAARYLSQYDPQITRKRLFALLRADGLICRV---GKAPTKKGIETGRFVQIMST 237
Query: 232 QHVEGST 238
+ S
Sbjct: 238 RRDGKSN 244
>gi|71276717|ref|ZP_00652985.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71900866|ref|ZP_00682982.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71162475|gb|EAO12209.1| BRO, N-terminal [Xylella fastidiosa Dixon]
gi|71729337|gb|EAO31452.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 264
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE--AINAHCKGVAKRYP- 56
MS I PF+F S+ +R ++ +D N WFVAKDV AL Y ++ + H
Sbjct: 1 MSQSIIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAATSNPARVTEHIPAEWVCVNR 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ T G +K ++EP +Y L +S P A F++W+ EVLP++RKTG Y+V P L
Sbjct: 60 IHTNAGERKALCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGEYTVN-PDLEY 118
Query: 117 TSASTVLRVHKHLEEL--AKQAGLKDNQLLLK 146
+ + K +EEL A + D + +L+
Sbjct: 119 DQMRSYSKDRKQMEELNTAHSRWISDVRQVLE 150
>gi|268592716|ref|ZP_06126937.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291311859|gb|EFE52312.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 197
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
I+ FE ++R IV + N WFVAKDV AL NS A+ A + + T GG
Sbjct: 30 DISVIRFEDVQVR-IVKINNNPWFVAKDVCDALQLTNSRAALLALDEDEKDVSLIYTLGG 88
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
QK+ IISE Y+L+ +S + A +F WVF +V+P++RKTG+Y V L
Sbjct: 89 NQKLNIISESGFYKLIARSRKATTKGTFAHRFTNWVFRDVIPSIRKTGAYGVPFSALNDF 148
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLK 146
+ + K + L+
Sbjct: 149 TKRQQQYQITASKHGRDLQSCKQKKADLQ 177
>gi|301028408|ref|ZP_07191654.1| BRO family protein [Escherichia coli MS 196-1]
gi|299878519|gb|EFI86730.1| BRO family protein [Escherichia coli MS 196-1]
Length = 138
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK--- 58
+ I+ +F+ ++R IV + WFV DV AL N +A++ L
Sbjct: 11 TEISVIKFDDIQVR-IVSINGEPWFVGADVCAALEISNVTDAVSVLDNDEVMTLALTEGH 69
Query: 59 --TEGGIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEA 111
GG + ++SE Y+L+ +S S A +F WVF EV+P++RKTGSY V
Sbjct: 70 SGKRGGARSWNVVSESGFYKLIARSRKASTPGTFAHRFSNWVFREVIPSIRKTGSYGVPF 129
Query: 112 PKLRATSAS 120
L S
Sbjct: 130 AMLNDFSKR 138
>gi|268599838|ref|ZP_06134005.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268583969|gb|EEZ48645.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
Length = 284
Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + T+A
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQITPK----TTADD 119
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ + + LA + + + +++ V+ +E + LP + Y+
Sbjct: 120 RTGLRRAVAALAGRKRIDYSSAYSMIHQRF----NVEAVEGIPADKLPEAV--AYVHALT 173
Query: 182 IGERL 186
+ L
Sbjct: 174 LHTGL 178
>gi|307694250|ref|ZP_07636487.1| putative antirepressor [Ruminococcaceae bacterium D16]
Length = 269
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 34/239 (14%)
Query: 2 STITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKT 59
+ I F+ E ++RTI+ + WFV DV G N I + K + T
Sbjct: 3 NKIEVFKNEQFGEVRTIL-IGGDPWFVVADVCAYFGVAN-RNRIMQNVDAEDKGGTQMDT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSA---------------QKFERWVFEEVLPTLRKT 104
GG+Q V I++E +Y +L A F+RW+ EV+PT+RKT
Sbjct: 61 PGGVQTVAIVNESGLYSVLFALQPTKARGVSKEHIEERQKKLHDFKRWITHEVIPTIRKT 120
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y + S + R+ K + + A L+L+ NR ++ +
Sbjct: 121 GGYMTD---------SLLERIQKEPAVIVEFAQ----ALILEKNRVKALECELNTAKPKA 167
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + D+ I + L P+ R + LLK SG P K G
Sbjct: 168 DYYDAFINPDDCTNIRTTAKELKIPE--RKFVQFLLKEKYLFRSPSGQLLPYNKDSNAG 224
>gi|71908129|ref|YP_285716.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71847750|gb|AAZ47246.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 172
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
+DKD WF+A DV ALG + + A + + T GGIQ+V IISE +Y L
Sbjct: 40 LDKDGQAWFIAADVCKALGLDRT--ATSRLDEDEKGVCSTHTLGGIQQVAIISESGLYSL 97
Query: 78 LVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAG 137
+ +S A++F++WV V+P++RK G Y L + ++ + + +
Sbjct: 98 IFRSRKELAKRFKKWVTSVVIPSIRKHGGYINGQEALSQPAQEVAIQAIQDQAQRVRAQH 157
Query: 138 LKDNQLLLKVNRGVT 152
++ + R +
Sbjct: 158 YEEKNDRREALRFIR 172
>gi|300935454|ref|ZP_07150449.1| BRO family protein [Escherichia coli MS 21-1]
gi|300459336|gb|EFK22829.1| BRO family protein [Escherichia coli MS 21-1]
Length = 186
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----RY 55
M+ + F F+ +++T++ D+ FVA DVA ALGY +A+ HC + K
Sbjct: 1 MNKVVKFSFDDKQVQTVIYADKPA-FVAMDVARALGYTTPQDAVKKHCNSLIKIKCREMR 59
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
L E Q V +I EPDV+RL++ S L SA++F+ WVFEEVLP++R+ G Y E PK
Sbjct: 60 HLGFEPIPQGVTLIHEPDVFRLIMHSKLESAERFQDWVFEEVLPSIRRNGYYG-EKPKTP 118
Query: 116 ATSASTV 122
A+ V
Sbjct: 119 DDMAAHV 125
>gi|221195256|ref|ZP_03568312.1| prophage antirepressor [Atopobium rimae ATCC 49626]
gi|221185159|gb|EEE17550.1| prophage antirepressor [Atopobium rimae ATCC 49626]
Length = 248
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 93/240 (38%), Gaps = 23/240 (9%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS +T F E ++RT + WFVAKDV +LG + + A T
Sbjct: 1 MS-LTVFTSDEFGQLRT-TTINGEPWFVAKDVTDSLGLDRT--ATRRLDDDEKAVRSTHT 56
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-- 117
GG Q + I+S P + L++ S P A+ ++RWV EVLP + + G Y
Sbjct: 57 VGGAQDMTIVSLPGLLSLVLSSRKPGAKAYKRWVTHEVLPAIHRDGGYIAAEVNEPPEVI 116
Query: 118 -------SASTVLRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIKH 167
+ T+ R + +EELA +A D + + KI + L +
Sbjct: 117 LARALKIADETMRRQKQQIEELAPRARFADAVAASDGCILVGSLAKIMRQNGLNIGQNRL 176
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVS-----KVSGGYRPTPKGEER 222
+D YL + R P QRA + +K + + T KG+
Sbjct: 177 FERLRSDGYL-CSFGRSRNVPTQRAMDMGLFRIKETVIGHADGSTTIQKTPLVTGKGQAY 235
>gi|153954528|ref|YP_001395293.1| prophage antirepressor [Clostridium kluyveri DSM 555]
gi|146347386|gb|EDK33922.1| Predicted prophage antirepressor [Clostridium kluyveri DSM 555]
Length = 267
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 22/244 (9%)
Query: 1 MSTITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS + F E ++RT + I FVA D+A ALGY+N+N+AI HC+ VAK
Sbjct: 1 MSKLQIFRSKEFGQVRT-TFINGKIHFVAVDIARALGYKNTNDAILKHCRWVAKCEVPHP 59
Query: 60 EGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ + +V I E D+YRL+ S LP AQ+FE W+F++VLP + TG Y P
Sbjct: 60 QSKTKVIEVNAIPEGDIYRLVANSELPGAQEFESWIFDKVLPQINHTGGYI---PNNEDE 116
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
S +L +AK+ + N+++ N+ + + + I + +
Sbjct: 117 SEEDILA---KAVLIAKRTIERKNEIIADKNKQLQEQ------KPKVIFAESVQASTTTI 167
Query: 178 TITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGY-RPTPKGEERGGKMCDVPMQH 233
I Q+ + L N+L L K G +S+ Y PT K G +
Sbjct: 168 LIGQLAKILKQNGIDMGQNRLFEWLRKNGYLISRKGTDYNMPTQKSANLG--LFTTKETT 225
Query: 234 VEGS 237
+ S
Sbjct: 226 IGHS 229
>gi|78357837|ref|YP_389286.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220242|gb|ABB39591.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 197
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 15 RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI--QKVRIISEP 72
RTIVD+D +WFVA DV LG + +++ + K P G + + II+EP
Sbjct: 29 RTIVDEDGELWFVAMDVCKHLGLK-PRDSVRYLDDDMKKHLPRTALGMKPGKPLLIINEP 87
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
+Y L+ +S P A F+ WV +EVLP++RK G+Y + P + ++++ + L
Sbjct: 88 GLYTLIFQSRKPEAIAFQDWVCKEVLPSIRKHGAYFMMKP---TDTDESIIQKATQIIAL 144
Query: 133 AKQ 135
A++
Sbjct: 145 ARE 147
>gi|187476908|ref|YP_784932.1| hypothetical protein BAV0402 [Bordetella avium 197N]
gi|187477929|ref|YP_785953.1| antirepressor [Bordetella avium 197N]
gi|115421494|emb|CAJ48003.1| phage-related protein [Bordetella avium 197N]
gi|115422515|emb|CAJ49040.1| Putative antirepressor [Bordetella avium 197N]
Length = 249
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-----T 59
T F FES+ +R +V + WF+A D+ AL N +E++ A
Sbjct: 13 TAFNFESHVVRVVV-INGEPWFIAADLCKALKLSNPSESLKALDDDEKMTLSSTEGHSGK 71
Query: 60 EGGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKL 114
GG Q +ISE +Y L+++ P +F +WV EVLPT+RKTGSY
Sbjct: 72 RGGAQFQSVISESGMYTLVLRCRDAVKPGTLPHRFRKWVTAEVLPTIRKTGSYGTP---- 127
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
R A +L L L DN V + GV EA +
Sbjct: 128 RIDPAELLLSGQSDL-----TIDLPDN-----VQAALNARAGVLAGEAFTLIREHLRRRI 177
Query: 175 EYLTITQIGERLNPPQRARFL 195
Y ++ +N P+ R +
Sbjct: 178 AYRAVSGRPSSVNEPKALRVI 198
>gi|218290887|ref|ZP_03494951.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
gi|218239154|gb|EED06356.1| prophage antirepressor [Alicyclobacillus acidocaldarius LAA1]
Length = 206
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-PLKTEGGIQKVR 67
FE +IR ++ D W+VAKDV AL NS +A++ + + G
Sbjct: 17 FEGQRIRVVMIDD-EPWWVAKDVCEALQIANSRDAVSRLDEDEKNTVAIIDGNRGNPNTT 75
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+I+E +Y+L S + +A++F RW+ EVLP +RKTG Y + A+ + V +
Sbjct: 76 VINEAGLYQLTFTSRVDTAKRFRRWLAHEVLPAIRKTGEYKTPERRQECEIAAKQVAVME 135
Query: 128 HLEELAKQAGL 138
++ +QA L
Sbjct: 136 -MKTRTEQARL 145
>gi|194099532|ref|YP_002002662.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|239999738|ref|ZP_04719662.1| putative phage associated protein [Neisseria gonorrhoeae 35/02]
gi|240126473|ref|ZP_04739359.1| putative phage associated protein [Neisseria gonorrhoeae SK-92-679]
gi|268685058|ref|ZP_06151920.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|193934822|gb|ACF30646.1| putative phage associated protein [Neisseria gonorrhoeae NCCP11945]
gi|268625342|gb|EEZ57742.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 280
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 118
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 119 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 169
Query: 182 IGERL 186
+ L
Sbjct: 170 LHTGL 174
>gi|113461541|ref|YP_719610.1| prophage antirepressor [Haemophilus somnus 129PT]
gi|112823584|gb|ABI25673.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 204
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-ENSNEAINAHCKGVAKRYPLK 58
M+ I+ F F+S+++R I + +F DV LG S E N + KG L
Sbjct: 1 MNTQISTFNFKSHQVR-IQSFNNEPYFCLSDVCDVLGLNRRSAETFNLNEKGCNNIATL- 58
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T+GG Q + I+EP++YR++ KS A +F+ WVFEEVLP +RKTG Y ++ +
Sbjct: 59 TKGGEQIITFINEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKYQLKPKQFALPE 118
Query: 119 AS 120
Sbjct: 119 PE 120
>gi|259906745|ref|YP_002647101.1| Putative antirepressor protein encoded by prophage CP-933N [Erwinia
pyrifoliae Ep1/96]
gi|224962367|emb|CAX53822.1| Putative antirepressor protein encoded by prophage CP-933N [Erwinia
pyrifoliae Ep1/96]
gi|283476531|emb|CAY72359.1| Uncharacterized protein HI1418 [Erwinia pyrifoliae DSM 12163]
Length = 195
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
IT F+ ++R IV+ + WF+ KD+ AL + A+ T G
Sbjct: 29 QDITVIRFDGVQVR-IVNINGEPWFMVKDICAALEMADHLVALRRLDGDEKGECLTPTPG 87
Query: 62 GIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G Q +R + E Y+L+ +S S A +F W+F EV+P++RKTG+Y V L
Sbjct: 88 GNQVMRTVRESGFYKLITRSRKASTPGTFAHRFSNWIFREVIPSIRKTGAYGVPFAFLND 147
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGV 151
S K + K + L
Sbjct: 148 HSKRKATYTTKASKRGKALQSCKTEKANLAAEEKA 182
>gi|317485526|ref|ZP_07944403.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923206|gb|EFV44415.1| phage antirepressor KilAC domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 263
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 44/257 (17%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------ 53
MS + F+ E +R +++ WFVA+DV LG + + + +
Sbjct: 1 MSGLRIFQNREFGAVR-VIEYGGEPWFVARDVCAVLG-TETRDLPDILEHDEQRPIVDII 58
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----- 108
+ G + RIISEP +Y L+++S P A+ F+RW+ EV+P++R+TG Y
Sbjct: 59 HTLNDSTGLRRDSRIISEPGLYSLVLRSRKPEAKAFKRWIVHEVIPSIRRTGGYGALALP 118
Query: 109 ------------VEAPKLRATSASTVLRVHKHLEELAKQAGL-------KDNQLLLKVNR 149
+ + R L + + +EE+ + K + L+ ++ +
Sbjct: 119 NFRNPAEAARAWADKEEQRLLEEQKRLALEQKMEEVRPKVVFAESIEVAKTSILVGEMAK 178
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQV-- 206
+ + TG D + + N YL + G + N P QR+ + +K G ++
Sbjct: 179 LIKQATGYDIGQN---RFFEWLRNRGYLH--KDGSQTNMPTQRSMDAGWMEIKEGTRIGS 233
Query: 207 ---SKVSGGYRPTPKGE 220
S+++ + T KG+
Sbjct: 234 SGESRITRTPKITGKGQ 250
>gi|240014896|ref|ZP_04721809.1| putative phage associated protein [Neisseria gonorrhoeae DGI18]
Length = 277
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 118
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 119 LRRAVAALA 127
>gi|71909133|ref|YP_286720.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71848754|gb|AAZ48250.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 199
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
+ +RT+ KD + WFVAKD+A LGY ++ + L T GG Q+ IIS
Sbjct: 23 NLAVRTVA-KDGSTWFVAKDIADILGYRDAANMARNLDDDEKDTHNLSTLGGEQEALIIS 81
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLE 130
E ++ +++S A+ F +WV VLP++R+ G Y A + V+ +H+ +
Sbjct: 82 ESGLFAAILRSRRKEAKDFRKWVTSVVLPSIRQHGGY---AKGQEDLPEALVINLHRKIR 138
Query: 131 ELAKQA 136
E A A
Sbjct: 139 ENAMPA 144
>gi|240081486|ref|ZP_04726029.1| putative phage associated protein [Neisseria gonorrhoeae FA19]
gi|240118724|ref|ZP_04732786.1| putative phage associated protein [Neisseria gonorrhoeae PID1]
gi|240124263|ref|ZP_04737219.1| putative phage associated protein [Neisseria gonorrhoeae PID332]
Length = 280
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 118
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 119 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 169
Query: 182 IGERL 186
+ L
Sbjct: 170 LHTGL 174
>gi|240128936|ref|ZP_04741597.1| putative phage associated protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 280
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 118
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 119 LRRAVAALA 127
>gi|74229793|ref|YP_308997.1| orf108 [Trichoplusia ni SNPV]
gi|72259707|gb|AAZ67478.1| orf108 [Trichoplusia ni SNPV]
Length = 490
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK----------RYPLKT 59
+S + ++ D F AKDVA AL + ++++AI + K R +
Sbjct: 14 KSFDVYIYINDDGEPLFKAKDVAVALDFADTDQAIRKNVDDCDKITWSEIPSPRRDLVVP 73
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ ++E +Y L++ S P A+ +RWV EVLP++RKTG Y ++ ++
Sbjct: 74 PNWHPRTLFLNESGLYSLMLASKKPQAKLIKRWVTSEVLPSIRKTGKYELK----EQQTS 129
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY--- 176
+ V+ K L + A+ L+ L + N + K++ V L +IK + EY
Sbjct: 130 TEVVNYDKKLAD-AQIEALQLKLQLSEANATIAKLSTVKDLTISEIKRNYETQMAEYKER 188
Query: 177 -----LTITQIGERLNPPQRARFLNKLLLKRGL 204
L + + + N +N LL K +
Sbjct: 189 EYRMQLVMKDMATQANMSMTQFAVNALLAKDNI 221
>gi|240116501|ref|ZP_04730563.1| putative phage associated protein [Neisseria gonorrhoeae PID18]
gi|240121966|ref|ZP_04734928.1| putative phage associated protein [Neisseria gonorrhoeae PID24-1]
gi|260439742|ref|ZP_05793558.1| putative phage associated protein [Neisseria gonorrhoeae DGI2]
Length = 280
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 3 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 59
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 60 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 118
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 119 LRRAVAALA 127
>gi|109522126|ref|YP_655803.1| gp42 [Mycobacterium phage PMC]
gi|157311236|ref|YP_001469280.1| gp47 [Mycobacterium phage Tweety]
gi|194302997|ref|YP_002014266.1| gp50 [Mycobacterium phage Boomer]
gi|318065840|ref|YP_004123872.1| gp50 [Mycobacterium phage Wee]
gi|91980826|gb|ABE67543.1| gp42 [Mycobacterium phage PMC]
gi|148540865|gb|ABQ86116.1| gp47 [Mycobacterium phage Tweety]
gi|194153045|gb|ACF34112.1| gp50 [Mycobacterium phage Boomer]
gi|315420923|gb|ADU15924.1| gp50 [Mycobacterium phage Wee]
Length = 334
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
FE + +R + ++VAKDV A G +AI + T GG Q++
Sbjct: 85 FEGHNVRHVFTD--QPYWVAKDVCEAAGISKYRDAIVQLDDDERVYLFVDTPGGPQRMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
++E V+ LL+ S P + F+RW+ EVLP++RKTG YS + T + +
Sbjct: 143 VTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYSAVDTNIALPDRKT---LAQW 199
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNP 188
+ E +A L + + L V + EA + + +
Sbjct: 200 VVEAETRAELAEAKAL---ELSVPASAWNELAEASGDYSVSDAS-------KVLSRDPAV 249
Query: 189 PQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ R L + + G + G ++
Sbjct: 250 NIKERALFQYMSSIGWVFKRQ-GRWKAY 276
>gi|317051657|ref|YP_004112773.1| BRO domain-containing protein [Desulfurispirillum indicum S5]
gi|316946741|gb|ADU66217.1| BRO domain protein [Desulfurispirillum indicum S5]
Length = 538
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK 65
F F ++RT++ D+ +WFVA D+A AL ++++ + + + T +
Sbjct: 179 VFHFGECEVRTVI-LDEQVWFVASDIAKALDFKHAPHMVRMLDDDEKGVHNVDTSSQNRH 237
Query: 66 --------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ II+E +Y ++KS P A+KF RWV EVLP +RK G Y
Sbjct: 238 GAISRQVELTIINESGLYNAILKSRKPEAKKFRRWVTSEVLPAIRKHGKY 287
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
++R ++ D +WF+ +D+A AL Y+ + + + + L EG + +S
Sbjct: 12 GLRLR-VIALDGQVWFLGRDIAKALEYQTAKDIVRSLDDDENWCRKLSPEGR-MPMLCVS 69
Query: 71 EPDVYRLLVKSTLPS---AQKFERWVFEEVLPTLR---KTGSYSVEAPKLRATSASTVLR 124
+Y L S ++F RW +E+LP R +GS S + S + +
Sbjct: 70 LRGLYVKLATSHSKKFIATRRFIRWAEKELLPLYRDQLCSGSASEKNAGASLDSGESGSK 129
Query: 125 VHKHLEELAKQ 135
++LA++
Sbjct: 130 RLIDFDKLARE 140
>gi|206599925|ref|YP_002241731.1| gp46 [Mycobacterium phage Fruitloop]
gi|206287013|gb|ACI12359.1| gp46 [Mycobacterium phage Fruitloop]
Length = 334
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
F+ + +R + ++VAKDV A G +AI + T GG Q++
Sbjct: 85 FDGHDVRHVFTD--QPYWVAKDVCEAAGISKYRDAIVQLDDDERVYLFVDTPGGPQRMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
++E V+ LL+ S P + F+RW+ EVLP++RKTG YS + T + +
Sbjct: 143 VTEAGVWSLLMISRSPKVKPFKRWMTHEVLPSIRKTGGYSAADTNIALPDRKT---LAQW 199
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNP 188
+ E +A L + + L V + EA + + +
Sbjct: 200 VVEAETRAELAEAKAL---ELSVPASAWNELAEAAGDYSVSDA-------AKVLSRDPAV 249
Query: 189 PQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ R L + + G + G ++
Sbjct: 250 NIKERALFQYMSSIGWVFKRQ-GRWKAY 276
>gi|238909831|ref|ZP_04653668.1| putative antirepressor protein in prophage [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
Length = 195
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
I+ F K+R IV+ + WF+AKDV AL + + + Y + T GG
Sbjct: 30 DISVIRFGGIKVR-IVNMGGDPWFIAKDVCAALEIVDHKVPMRRLNDNEKEGYSIPTLGG 88
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
IQ + I+SE Y+L+ +S S A +F WVF EV+P++RKTGSY V L
Sbjct: 89 IQTMTIVSESGFYKLIARSRKASIPGTAANRFSEWVFGEVIPSIRKTGSYGVPFAFLNDH 148
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
S K + K + L
Sbjct: 149 SKRKAAYDKKASKRGKDLQACKGEKSRLFAEEA 181
>gi|268595552|ref|ZP_06129719.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|293398333|ref|ZP_06642524.1| phage associated protein [Neisseria gonorrhoeae F62]
gi|268548941|gb|EEZ44359.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|291611257|gb|EFF40341.1| phage associated protein [Neisseria gonorrhoeae F62]
Length = 301
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 139
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 140 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 190
Query: 182 IGERL 186
+ L
Sbjct: 191 LHTGL 195
>gi|268687322|ref|ZP_06154184.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|268627606|gb|EEZ60006.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
Length = 284
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 122
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 123 LRRAVAALA 131
>gi|145642113|ref|ZP_01797683.1| possible prophage antirepressor [Haemophilus influenzae R3021]
gi|145273192|gb|EDK13068.1| possible prophage antirepressor [Haemophilus influenzae 22.4-21]
Length = 210
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 25/203 (12%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN-EAINAHCKGVAKRYPLKTE 60
+ I+ F F+SN IR I + +F KDV AL + ++ E + +GV R + T
Sbjct: 3 TQISTFNFKSNSIR-IEVINNEPFFALKDVCDALAIKVASPERFRLNFEGVT-RNVIPTS 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q++ I+EP++YR++ +S A +F+ W+FEEVLP +RKTG Y + P L +
Sbjct: 61 SGNQELTFINEPNLYRIIFRSNKAEAIEFQNWIFEEVLPQIRKTGKYEISQPALPMPEPT 120
Query: 121 TV------------------LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
R+ LE L K L ++ +V VT+ V ++
Sbjct: 121 YAQSFSQQDINNLVWLLFSHERMRFLLENLYKPLALFNSPFAPQVYGNVTEYKRVHKIAK 180
Query: 163 MDIK----HLPSSDNDEYLTITQ 181
IK L S + +++ +T+
Sbjct: 181 PLIKKLLDKLQSDNPEKWRHLTR 203
>gi|268602172|ref|ZP_06136339.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268586303|gb|EEZ50979.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 284
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 122
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 123 LRRAVAALA 131
>gi|254494526|ref|ZP_05107697.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|268604438|ref|ZP_06138605.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268682892|ref|ZP_06149754.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|226513566|gb|EEH62911.1| predicted protein [Neisseria gonorrhoeae 1291]
gi|268588569|gb|EEZ53245.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268623176|gb|EEZ55576.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
Length = 284
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 7 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 64 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 122
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 123 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 173
Query: 182 IGERL 186
+ L
Sbjct: 174 LHTGL 178
>gi|268597587|ref|ZP_06131754.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268551375|gb|EEZ46394.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
Length = 301
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 139
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ R L + + + V+ +E + LP + Y+
Sbjct: 140 LRRAVAALVGRKRIG-------YSSAYSMIHQRFNVEAVEGIPADKLPEAV--AYVHALT 190
Query: 182 IGERL 186
+ L
Sbjct: 191 LHTGL 195
>gi|291042992|ref|ZP_06568730.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291013131|gb|EFE05100.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 301
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+TI+ F F+S +RT WF DVA L +N+ + + +G+ K + T+
Sbjct: 24 NTISVFSFKSQNVRT-QILGAEPWFCLGDVAEILQIQNARQ-LPLKDQGIQKS-SVATKK 80
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
G Q++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + PK A +
Sbjct: 81 GNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQI-TPKTTADDRTG 139
Query: 122 VLRVHKHLE 130
+ R L
Sbjct: 140 LRRAVAALA 148
>gi|126011070|ref|YP_001039895.1| putative antirepressor [Streptococcus phage phi3396]
gi|124389339|gb|ABN10781.1| putative antirepressor [Streptococcus phage phi3396]
Length = 251
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ I F F K+RT+ + +FV KDVA LGY NSN+A+ H K+ K++
Sbjct: 1 MNEI--FNFNGQKVRTLTINN-EPYFVGKDVADVLGYTNSNDALKNHVDSDDKQILQKSQ 57
Query: 61 GG-----IQKVRIISEPDVYRLLVKST--------LPSAQKFERWVFEEVLPTLRKTGSY 107
+ V II+E VY L+ + AQKF+RWV EVLP +RK G Y
Sbjct: 58 NATLEIPNRGVTIITESGVYNLIFAAAKQSANPEIKEKAQKFKRWVTSEVLPQIRKQGLY 117
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
E L + + K L++ KQ L + LK + +
Sbjct: 118 VPE--NLSDEAFIALFTGQKKLKQ--KQLELAHDVDYLKSEQPIH 158
>gi|309379882|emb|CBX21293.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 281
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 11/193 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE-AINAHCKGVAKRYPLKTEG 61
T++ F+F++ + + ++ F DVA L N+N N GV K Y + T+G
Sbjct: 2 TLSIFQFQAEQSVRVEFQNNEPLFCLTDVARILEISNANPLRFNMKRDGVHKMYSVDTKG 61
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
++ I+EP++YR++ +S A KF+ W+FEEV+P +RKTG Y + T+A
Sbjct: 62 RKNEITYINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKTGGYQIGQK----TTADD 117
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ + + L + G+ + +++ V+ +E + ++ LP + Y+
Sbjct: 118 RTGLRQAVAALVGRKGIDYSSAYSMIHQRF----NVEAIEDIPVEKLPEAV--AYVHALT 171
Query: 182 IGERLNPPQRARF 194
+ L R
Sbjct: 172 LHTGLTGEVLDRE 184
>gi|148380344|ref|YP_001254885.1| BRO family protein [Clostridium botulinum A str. ATCC 3502]
gi|148289828|emb|CAL83936.1| BRO family protein [Clostridium botulinum A str. ATCC 3502]
Length = 266
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 1 MSTITPF---EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-YP 56
MS + F +F ++ +VD+++ WF A D+AT LGY N +AI HCK
Sbjct: 1 MSNLQIFKNQQFGEFEL--LVDENKKEWFPATDIATILGYSNPQKAIRDHCKQKGCTIRS 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----- 111
+ T+GG Q + I E ++YRL+ S LPSA+KFE W+F+E+LPT+RKTG Y
Sbjct: 59 VLTKGGKQNKKFIDEGNLYRLITHSELPSAEKFEIWIFDEILPTIRKTGGYVASEDLFIN 118
Query: 112 ---PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
P L S + + + + LK+ ++ K + V + + E I
Sbjct: 119 TYLPYLDEQSKMVFRNTLEIVRKQNEIIALKEKEIEHKEDVIVGLVDEISLAEKRQI 175
>gi|303257617|ref|ZP_07343629.1| toxin-antitoxin system, toxin component, Bro family
[Burkholderiales bacterium 1_1_47]
gi|302859587|gb|EFL82666.1| toxin-antitoxin system, toxin component, Bro family
[Burkholderiales bacterium 1_1_47]
Length = 290
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA--KRYPLK 58
MS F FE + T++ D + FVAK V + LG+++ A+ AH K L
Sbjct: 1 MSNALSFTFERGSL-TVLGDDLSPLFVAKQVCSFLGFKDPINAVKAHVDPEDLCKVEMLD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
Q V ++E +Y L+ S LP A++F+RWV EVLP +RK G YS + S
Sbjct: 60 RLNRKQLVNCVNESGLYALIFGSKLPKAKQFKRWVTNEVLPAIRKQGCYSAQEQDNTLIS 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ + + K L N+ V R + + + + + + ++
Sbjct: 120 NEQQYELSSRV--MRKTHALFGNKNYSFVYRALKRRFRIPRYTCLLQRDFETA 170
>gi|219870814|ref|YP_002475189.1| putative antirepressor protein [Haemophilus parasuis SH0165]
gi|219691018|gb|ACL32241.1| putative antirepressor protein [Haemophilus parasuis SH0165]
Length = 281
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL---- 57
+ ++ F FE + IR I + WFVAKDV LG +N +A+ + + +
Sbjct: 5 TQLSTFNFEQSSIRVIAVNN-EPWFVAKDVCDTLGIKNPTQALENLDEDERAMFNIGLDQ 63
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVE 110
+ + ++ I+SE +Y L+++ + +F +WV EVLP +RKTGSY+
Sbjct: 64 RVNFDNRVSEINIVSESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPQIRKTGSYTKS 123
Query: 111 APKLRATSASTVLRV 125
R V +
Sbjct: 124 TTDERTGLRQAVSAL 138
>gi|284921918|emb|CBG34993.1| putative prophage antirepressor [Escherichia coli 042]
Length = 192
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ F+ +R +V + + WFVAKDV AL NS A+ T GG
Sbjct: 24 DLVVLRFDGVDVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTYTPGG 82
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
Q + IISE Y+L+ +S + A +F WVF V+P +RKTG+Y + L+
Sbjct: 83 NQNMSIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGAYGIPWGALQDF 142
Query: 118 SAST 121
S
Sbjct: 143 SRRK 146
>gi|254518972|ref|ZP_05131028.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226912721|gb|EEH97922.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 216
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F+ ++ I++ D +F A A+ LGY N+ A+N HCK K Y + T
Sbjct: 8 MEKMEIFKNDTFGEMNILELDGKDYFQAVQCASMLGYSNARAALNRHCKHSIK-YKIATI 66
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
GG Q V I E D++RL+V S LP A+KFE WVF+E+LP++R G Y+ +
Sbjct: 67 GGNQDVSFIPEGDLFRLIVHSKLPYAEKFESWVFDEILPSIRSKGIYATDKVIEDG---- 122
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L+ LE+L + + +QL+ + K+ D++ ++ + IT
Sbjct: 123 --LKETTTLEKLLTELKEERHQLMFGLEESKEKVNYHDKV----------LNSKLLIPIT 170
Query: 181 QIGERLNPP--QRARFLNKLLLKRGLQVS 207
I + Q + LN L + Q++
Sbjct: 171 IIAKDYGMSGVQMNKILNSLRVNTEFQIN 199
>gi|297528606|ref|YP_003669881.1| prophage antirepressor [Geobacillus sp. C56-T3]
gi|297251858|gb|ADI25304.1| prophage antirepressor [Geobacillus sp. C56-T3]
Length = 251
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 26/228 (11%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F +R + + + N V DVA ALGY +EAI++HCKG A Y + T
Sbjct: 1 MNQLQIFNHPMFGDVRFV-EINNNPHAVGNDVAKALGYSRPHEAISSHCKG-AVTYRILT 58
Query: 60 EGGIQKVRIISEPDVYRLLVK----STLPS----AQKFERWVFEEVLPTLRKTGSYSVEA 111
GG Q V++I E D+YRL++K S P A++FE+W+FE VLPT+R+TG Y
Sbjct: 59 NGGEQTVKVIPEGDIYRLIIKAADQSKNPEIRQKAEEFEKWIFEVVLPTIRRTGGYV--- 115
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
A+ + ++ +L +Q + +L V R +I ++
Sbjct: 116 -------ANEDMFINTYLPFADEQTKMMFRGVLETVRRQNEQIA---AMKPKADYFDALV 165
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
D + + L +R + LL G +P +
Sbjct: 166 DRNLLTNFRDTAKELEVKERYFI--EWLLDNKFVYRDQKGKLKPYAQY 211
>gi|300902126|ref|ZP_07120131.1| BRO family protein [Escherichia coli MS 84-1]
gi|301306877|ref|ZP_07212924.1| BRO family protein [Escherichia coli MS 124-1]
gi|300405791|gb|EFJ89329.1| BRO family protein [Escherichia coli MS 84-1]
gi|300837886|gb|EFK65646.1| BRO family protein [Escherichia coli MS 124-1]
gi|315252740|gb|EFU32708.1| BRO family protein [Escherichia coli MS 85-1]
gi|320180575|gb|EFW55505.1| prophage antirepressor [Shigella boydii ATCC 9905]
Length = 192
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ F+S +R +V + + WFVAKDV AL NS A+ T GG
Sbjct: 24 DLVVLRFDSVNVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTYTPGG 82
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
Q +RIISE Y+L+ +S + A +F WVF V+P +RKTG+Y + L+
Sbjct: 83 NQNMRIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGTYGIPWGALQDF 142
Query: 118 SAST 121
S
Sbjct: 143 SRRK 146
>gi|187732643|ref|YP_001880699.1| putative antirepressor protein encoded by prophage CP-933N
[Shigella boydii CDC 3083-94]
gi|187429635|gb|ACD08909.1| putative antirepressor protein encoded by prophage CP-933N
[Shigella boydii CDC 3083-94]
Length = 192
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ F+S +R +V + + WFVAKDV AL NS A+ T GG
Sbjct: 24 DLVVLRFDSVNVR-VVYLNGDPWFVAKDVCAALELTNSRTALQMLDDDEKGVNLTYTPGG 82
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
Q +RIISE Y+L+ +S + A +F WVF V+P +RKTG+Y + L+
Sbjct: 83 NQNMRIISESGFYKLIARSRKATTPGTFAHRFSNWVFRNVIPGIRKTGTYGIPWGALQDF 142
Query: 118 SAST 121
S
Sbjct: 143 SRRK 146
>gi|257451545|ref|ZP_05616844.1| putative antirepressor - phage associated protein [Fusobacterium
sp. 3_1_5R]
Length = 194
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH-CKGVAKRYPLK 58
M+ I F+ E +IR I++K+ +F KDV LG E + + GV +
Sbjct: 1 MNEIKMFKNEKFGEIR-IIEKEGKPYFNLKDVCVILGLEQVSRVKSRLKEDGVILNKVID 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA-PKLRAT 117
G Q+ I EP++Y+ + +S +A++F WV EVLPT+RK G Y+ ++
Sbjct: 60 NLGREQQANFIDEPNLYKCIFQSRKENAEEFTDWVTSEVLPTIRKHGIYATDSVIDNILN 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + L+E + +K R +T +++
Sbjct: 120 NPDFGIELLTKLKE--------ERNARIKAERRNAILTHINKT----------------Y 155
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQV 206
T+T+I + LN + A LNK+L + L
Sbjct: 156 TMTEIAKELNL-KSATQLNKILSDKNLIF 183
>gi|206599580|ref|YP_002242019.1| gp36 [Mycobacterium phage Brujita]
gi|206282729|gb|ACI06250.1| gp36 [Mycobacterium phage Brujita]
gi|302858471|gb|ADL71218.1| gp36 [Mycobacterium phage island3]
Length = 289
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 89/254 (35%), Gaps = 29/254 (11%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGI 63
F + + +R ++ D WFV D+ L N + + GV + YP+ + G
Sbjct: 28 QAFTYGNAAVRVVL-IDGEPWFVLADLCKVLDIRNVKDVRDRLADGVDQTYPIADSLGRT 86
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS----- 118
Q+ I+SE +Y ++++S P A F RW+ VLP +R+TG+Y +
Sbjct: 87 QQATIVSESGMYEVVIRSDKPEAVAFRRWITGTVLPEIRRTGAYGAPVALPDRKTLAQWV 146
Query: 119 -ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + +A K+ + + + G E D + S D D
Sbjct: 147 VEAEERAESEARARIEAEARAKELEAPAAAWKHLASAEG--DYEVADAAKVLSRDPD--- 201
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKV-SGGYRPTP---KGEERGGKMCDVPMQH 233
IG L + G SG +R + P H
Sbjct: 202 --ISIGRD--------RLFSFMAAEGWIYRNRASGRWRAYQTQIDNRRLTER-FGRPYLH 250
Query: 234 VEGSTQQLKWNSNL 247
E S + + +
Sbjct: 251 -EPSGEMRLGDPTI 263
>gi|317058118|ref|ZP_07922603.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683794|gb|EFS20629.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 208
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH-CKGVAKRYPLK 58
M+ I F+ E +IR I++K+ +F KDV LG E + + GV +
Sbjct: 15 MNEIKMFKNEKFGEIR-IIEKEGKPYFNLKDVCVILGLEQVSRVKSRLKEDGVILNKVID 73
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA-PKLRAT 117
G Q+ I EP++Y+ + +S +A++F WV EVLPT+RK G Y+ ++
Sbjct: 74 NLGREQQANFIDEPNLYKCIFQSRKENAEEFTDWVTSEVLPTIRKHGIYATDSVIDNILN 133
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + + L+E + +K R +T +++
Sbjct: 134 NPDFGIELLTKLKE--------ERNARIKAERRNAILTHINKT----------------Y 169
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQV 206
T+T+I + LN + A LNK+L + L
Sbjct: 170 TMTEIAKELNL-KSATQLNKILSDKNLIF 197
>gi|308174803|ref|YP_003921508.1| hypothetical protein BAMF_2912 [Bacillus amyloliquefaciens DSM 7]
gi|307607667|emb|CBI44038.1| Uncharacterized Bro-N domain-containing protein J Ld-bro-j
[Bacillus amyloliquefaciens DSM 7]
gi|328554754|gb|AEB25246.1| hypothetical protein BAMTA208_15445 [Bacillus amyloliquefaciens
TA208]
Length = 249
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 10/209 (4%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I F FE ++RT+ K +++FVAKDV AL NS A+ + + +
Sbjct: 1 MNHIEQIFNFEGQEVRTVSVK-GDVYFVAKDVCDALEISNSRHALTRLDDDESMSFEMTH 59
Query: 60 EGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
K +++++E +Y L+ S +A+ F+RWV +VLP++RK Y +
Sbjct: 60 PQSPSKTILMQVVNESGLYELIFSSRKKTAKDFKRWVKRDVLPSIRKNKVYIDPTATDQE 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVN----RGVTKITGVDQLEAMDIKHLPSSD 172
+ + L A + + V ++K T D+++A++ D
Sbjct: 120 IDHAVRFATPQKRRNLLMSATIDGENSVFAVYGAIKEYISKWTAEDKIKALNHVERTLLD 179
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLK 201
+ + I + R + K L K
Sbjct: 180 KKDTYG-SDIAFVHKIEELLRHVAKDLDK 207
>gi|167769194|ref|ZP_02441247.1| hypothetical protein ANACOL_00517 [Anaerotruncus colihominis DSM
17241]
gi|167668834|gb|EDS12964.1| hypothetical protein ANACOL_00517 [Anaerotruncus colihominis DSM
17241]
Length = 241
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
M+ + F+ +++ + +F A A LGY N+ +AI HCK GV KR +
Sbjct: 1 MNEMQVFQSSDFGELGVLEIEGKPYFPATACAKMLGYGNARDAIKRHCKEEGVVKRDGVS 60
Query: 59 --------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS-V 109
T +++ I+E ++YRL+V S LP+A++FE+WVF+EVLP +RKTG Y V
Sbjct: 61 QTTNQHGVTTCQTVEMKFINEGNLYRLIVHSKLPAAERFEKWVFDEVLPAIRKTGGYGRV 120
Query: 110 EAPKLRATSASTV-LRVHKHLEELAK 134
+ + +A+ V + K L L +
Sbjct: 121 DVTAIIMQTATAVCAEMVKQLAPLFQ 146
>gi|37526842|ref|NP_930186.1| hypothetical protein plu2952 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786274|emb|CAE15326.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 271
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S T F+F S++IR +++KD WFVA DV +AL +N +AI + + G
Sbjct: 11 SNFTIFKFGSHEIR-VINKDGEPWFVAHDVCSALEIQNITQAIERLDDDERSMFNI---G 66
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSA-----QKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ ++SE +Y L+++ +F +WV EVLP++RK G+Y +PK+
Sbjct: 67 HQDDINVVSESGMYTLVLRCRDAIKQGSIPHRFRKWVTNEVLPSIRKVGNY--HSPKI-I 123
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
T T+LR + L + G+ ++ +++ I+ +DQL
Sbjct: 124 TDEHTLLR--DAVNMLVGKRGMMCSEAYSFIHQRF-NISHIDQL 164
>gi|71899743|ref|ZP_00681894.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
gi|71730438|gb|EAO32518.1| BRO, N-terminal [Xylella fastidiosa Ann-1]
Length = 203
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE--AINAHCKGVAK-RYP 56
M+ +I PF+F S+ +R ++ +D N WFVAKDV AL Y ++ + H K P
Sbjct: 1 MTRSIIPFDFHSHVVRVVM-RDGNPWFVAKDVMDALDYAETSNPARVTEHIPSEWKGVNP 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ T GG QK+ ++EP +Y L +S P A F++W+ EVLP++RKTGSY
Sbjct: 60 IHTLGGEQKLLCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGSY 110
>gi|310827574|ref|YP_003959931.1| prophage antirepressor [Eubacterium limosum KIST612]
gi|308739308|gb|ADO36968.1| prophage antirepressor [Eubacterium limosum KIST612]
Length = 280
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 36/274 (13%)
Query: 8 EFES---NKIRTIVDK---DQ---NIWFVAKDVATALGYE-NSNEAINAHCK--GVAKRY 55
FES KIRT+V++ D W VA DV ALGY +++ + H +KR
Sbjct: 9 TFESALFGKIRTLVEREAADGAEAREWLVAADVCAALGYSKDASSIVKRHVNPADTSKRR 68
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G Q + +++E +Y L+ ST P AQ F+R+V +LP++R+ G+Y + R
Sbjct: 69 ICDANGHHQSMLVVNESGLYALIFGSTRPEAQTFKRYVTAVILPSIRRHGAYMEDDVMDR 128
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+R L ++ + K+ L KV++ +I + P++ E
Sbjct: 129 VQDDPGAMR---ELMDMLRAETAKNKALGAKVDKLEMRIKALT----------PNAVFGE 175
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS-GGYRPTPKGEERGG---------- 224
+T ++ + + N + + R +K+ GG+ T KG
Sbjct: 176 AITASEGSISMGDMAKLLRQNGVNIGRNRLFTKLREGGFLSTQKGSWNKPLQWTMEQGYF 235
Query: 225 KMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELIN 258
++ + G ++ W+ + Q L++
Sbjct: 236 EIEEGFFDRPLGGEGKMLWSVTRVTPVGQACLVD 269
>gi|9630500|ref|NP_046925.1| gp30 [Enterobacteria phage N15]
gi|3192719|gb|AAC19072.1| gp30 [Enterobacteria phage N15]
Length = 264
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 16/184 (8%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-- 57
M ++ F F ES+ IR ++ + WFVA D+ AL N ++A+ L
Sbjct: 1 MKALSVFSFQESHPIRVVLV-GGDPWFVALDICAALNIANPSDALRKLDHDEKLTLGLTE 59
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVE 110
K + ++V ++SE +Y ++++ +A +F +WV EVLP +RK G Y+
Sbjct: 60 AQKLDRMAREVNVVSESGLYTIILRCRDAVKQGTTAWRFRKWVTNEVLPAIRKNGEYAFV 119
Query: 111 APKLR----ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
P+ + + + ++A+ + N + V + + + +
Sbjct: 120 EPEPKNAGEPLDWRQKEELRGLINDIAQSFQYR-NAWVSGVWMALRRACRNPSPNPITVD 178
Query: 167 HLPS 170
LP+
Sbjct: 179 DLPA 182
>gi|200003978|ref|YP_002221560.1| putative antirepressor [Bacteroides phage B40-8]
gi|198209675|gb|ACH81958.1| putative antirepressor [Bacteroides phage B40-8]
Length = 245
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 22/253 (8%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E K+R V + F D+ L + KGV+ T GG+Q + +
Sbjct: 5 EFGKVRVSVV-NGEPMFCLSDICKILNLQPGATKNRLDEKGVS-LINTPTNGGMQNIVYV 62
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRATSASTVLRVHKH 128
+E ++Y+ +++S P A+ F+ WV +VLP++RK G+Y EA + TS ++++
Sbjct: 63 NEKNLYKAIMRSDKPEAEAFQDWVCGDVLPSIRKHGAYMTPEAIEKTLTSPDFIIQLATQ 122
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL-- 186
L K K Q K+ K+ + +EA + + I ++ + +
Sbjct: 123 L----KNEQEKRKQAEAKIEADKPKVLFSEAVEAS----------KKSILIRELAKIITQ 168
Query: 187 -NPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNS 245
+ L + L K G S +PT G + ++ + + + +N+
Sbjct: 169 NGYQIGEKQLYERLRKAGYLCSVGESRNQPTQTYMNMG--LFEIRKRVIIDGGETKVYNT 226
Query: 246 NLLVSFLQNELIN 258
++ Q IN
Sbjct: 227 TMVTGRGQQYFIN 239
>gi|268589905|ref|ZP_06124126.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291314746|gb|EFE55199.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 198
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-G 61
I+ FE ++R IV + WF+AKDV +ALG N ++A+NA L
Sbjct: 30 DISVIRFEGVQVR-IVKINNEPWFIAKDVCSALGITNPSKALNALDLDEKNTVTLSYGIQ 88
Query: 62 GIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G ++I+E Y+L+ +S + A +F WVF +V+P++RKTG+Y V L
Sbjct: 89 GNPNRQVIAESGFYKLIARSRKATTKGTFAHRFTNWVFRDVIPSIRKTGAYGVPFSALND 148
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLK 146
+ + K + L+
Sbjct: 149 FTKRQQQYQITASKHGRDLQSCKQKKADLQ 178
>gi|71906428|ref|YP_284015.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71846049|gb|AAZ45545.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 172
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 7 FEFESNKIRT-------IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
F+F++ + T +DKD WFV DV ALG + + AI T
Sbjct: 24 FQFDN--VATGDNFALSALDKDGQAWFVGADVCKALGLDRT--AIRRLDDDERGVASTHT 79
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATS 118
GG Q+V II+EP +Y L+ S SA++F++WV V+P++R+ G Y + + +
Sbjct: 80 LGGTQQVSIINEPGLYSLIFSSRKESAKRFKKWVTSVVIPSIRQNGGYINGQEALSKPEQ 139
Query: 119 ASTVLRVHKHLE 130
A T+ +H+ +
Sbjct: 140 AITLQAIHEEAQ 151
>gi|273809598|ref|YP_003344836.1| possible bacteriophage antirepressor [Aggregatibacter phage S1249]
gi|261410505|gb|ACX80336.1| possible bacteriophage antirepressor [Aggregatibacter phage S1249]
Length = 217
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
MS + F F SN +R + D F DV +NS + GV Y L
Sbjct: 1 MSDLQIFNFNSNPVR-VELFDNQPHFCLLDVCEIFEIQNSRRVQSQMLDPQGVRLAYILA 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ ++ I+EP++YR++ +S P A+ F+ WVFEEVLP +RKTG Y ++ P L A
Sbjct: 60 KDEKQRRTAFINEPNLYRIIFRSEKPIAKNFQNWVFEEVLPQIRKTGQYQLQQPALPAPE 119
Query: 119 ASTVLRVHKHLEELAKQAGLK 139
+ + ++ EL + L
Sbjct: 120 KRFTVELTEY--ELQQLVWLW 138
>gi|29566461|ref|NP_818027.1| gp54 [Mycobacterium phage Che9d]
gi|29425186|gb|AAN07972.1| gp54 [Mycobacterium phage Che9d]
Length = 333
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
FE + +R + ++VAKDV A+G + +AI + T GG Q +
Sbjct: 85 FEGHNVRHVFTD--QPYWVAKDVCEAVGIKAYRDAIAQLDSDERVSVAVDTLGGAQNMVA 142
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
++E V+ L++ S P + F+RW+ EVLP++RKTG Y+ + + + +
Sbjct: 143 VTEAGVWSLMLISRSPRVKPFKRWMTHEVLPSIRKTGGYAADTDIALPDRKT----LAQW 198
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNP 188
+ E +A L + + L V + EA + + +
Sbjct: 199 VVEAETRAELAEAKAL---ELSVPASAWNELAEAAGDYAVSDA-------AKVLSRDPAV 248
Query: 189 PQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+ R L + + G + G ++
Sbjct: 249 NIKERALFQYMSSIGWVFKRQ-GRWKAY 275
>gi|167466952|ref|ZP_02331656.1| phage antirepressor [Yersinia pestis FV-1]
Length = 363
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 10/239 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTE 60
S I+ F F+++ +R ++ WFVA D+ L N ++I
Sbjct: 43 SAISQFHFDTHAVR-VLSIHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 101
Query: 61 GGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G ++ I+SE +Y L+++ P + +WV EVLP +RKTGSY +
Sbjct: 102 RGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATK 161
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +E KQ + + L K N+ IT L+ D+
Sbjct: 162 KALPGKITIEQ---QEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQ 218
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+ + R+ + L L+VS + + G + M+
Sbjct: 219 FTEALSLAARVTIEGEFLGKQEALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQN 277
>gi|108807483|ref|YP_651399.1| hypothetical protein YPA_1487 [Yersinia pestis Antiqua]
gi|108811760|ref|YP_647527.1| hypothetical protein YPN_1597 [Yersinia pestis Nepal516]
gi|145598300|ref|YP_001162376.1| hypothetical protein YPDSF_1003 [Yersinia pestis Pestoides F]
gi|162418488|ref|YP_001606806.1| BRO domain-containing protein [Yersinia pestis Angola]
gi|165927697|ref|ZP_02223529.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939336|ref|ZP_02227884.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009412|ref|ZP_02230310.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210910|ref|ZP_02236945.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401362|ref|ZP_02306859.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420176|ref|ZP_02311929.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426582|ref|ZP_02318335.1| BRO family, N- domain protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|270490772|ref|ZP_06207846.1| BRO family, N-terminal domain protein [Yersinia pestis KIM D27]
gi|294503821|ref|YP_003567883.1| hypothetical protein YPZ3_1711 [Yersinia pestis Z176003]
gi|108775408|gb|ABG17927.1| hypothetical protein YPN_1597 [Yersinia pestis Nepal516]
gi|108779396|gb|ABG13454.1| hypothetical protein YPA_1487 [Yersinia pestis Antiqua]
gi|145209996|gb|ABP39403.1| hypothetical protein YPDSF_1003 [Yersinia pestis Pestoides F]
gi|162351303|gb|ABX85251.1| BRO domain protein [Yersinia pestis Angola]
gi|165912677|gb|EDR31306.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920311|gb|EDR37588.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991967|gb|EDR44268.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208090|gb|EDR52570.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961871|gb|EDR57892.1| BRO family, N- domain protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167049058|gb|EDR60466.1| BRO family, N- domain protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054458|gb|EDR64270.1| BRO family, N- domain protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|262362060|gb|ACY58781.1| hypothetical protein YPD4_1873 [Yersinia pestis D106004]
gi|262365803|gb|ACY62360.1| hypothetical protein YPD8_1677 [Yersinia pestis D182038]
gi|270339276|gb|EFA50053.1| BRO family, N-terminal domain protein [Yersinia pestis KIM D27]
gi|294354280|gb|ADE64621.1| hypothetical protein YPZ3_1711 [Yersinia pestis Z176003]
Length = 335
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 10/239 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTE 60
S I+ F F+++ +R ++ WFVA D+ L N ++I
Sbjct: 15 SAISQFHFDTHAVR-VLSIHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 73
Query: 61 GGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G ++ I+SE +Y L+++ P + +WV EVLP +RKTGSY +
Sbjct: 74 RGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATK 133
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +E KQ + + L K N+ IT L+ D+
Sbjct: 134 KALPGKITIEQ---QEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQ 190
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+ + R+ + L L+VS + + G + M+
Sbjct: 191 FTEALSLAARVTIEGEFLGKQEALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQN 249
>gi|22126078|ref|NP_669501.1| phage antirepressor [Yersinia pestis KIM 10]
gi|149365948|ref|ZP_01887983.1| putative phage protein [Yersinia pestis CA88-4125]
gi|218929229|ref|YP_002347104.1| hypothetical protein YPO2126 [Yersinia pestis CO92]
gi|229897546|ref|ZP_04512702.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898191|ref|ZP_04513339.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902051|ref|ZP_04517172.1| putative phage protein [Yersinia pestis Nepal516]
gi|21959034|gb|AAM85752.1|AE013823_3 putative phage antirepressor [Yersinia pestis KIM 10]
gi|115347840|emb|CAL20760.1| putative phage protein [Yersinia pestis CO92]
gi|149292361|gb|EDM42435.1| putative phage protein [Yersinia pestis CA88-4125]
gi|229680947|gb|EEO77042.1| putative phage protein [Yersinia pestis Nepal516]
gi|229688757|gb|EEO80825.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693883|gb|EEO83932.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|320015195|gb|ADV98766.1| putative phage protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 364
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 10/239 (4%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTE 60
S I+ F F+++ +R ++ WFVA D+ L N ++I
Sbjct: 44 SAISQFHFDTHAVR-VLSIHNEPWFVAADLCRVLELSNPTKSIMNLDDDEKALTSIQGLS 102
Query: 61 GGIQKVRIISEPDVYRLLVKST---LPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G ++ I+SE +Y L+++ P + +WV EVLP +RKTGSY +
Sbjct: 103 RGNEEANIVSESGMYTLILRCRDAVKPGTIPHRVRKWVTAEVLPAIRKTGSYDSPRKATK 162
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +E KQ + + L K N+ IT L+ D+
Sbjct: 163 KALPGKITIEQ---QEAVKQLVMNRGKALPKENQAKAMITMWSALKTHFGCSYKEISEDQ 219
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+ + R+ + L L+VS + + G + M+
Sbjct: 220 FTEALSLAARVTIEGEFLGKQEALPVPKLEVSLPIQWWFDNNPAVKYGNRENITKMKQN 278
>gi|291037232|ref|ZP_06568196.1| hypothetical protein GxylN3_00150 [Gluconacetobacter xylinus NBRC
3288]
Length = 246
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
P+ F +R++ + WFVA DVA AL YE++ AI + ++TEGG Q
Sbjct: 25 IPYAFGGKLVRSVF-INGFTWFVADDVARALDYESARSAIRYLDADEVAKAFIETEGGPQ 83
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-------SVEAPKLRAT 117
+ I+SE +Y L KST A+ F RWV EVLP +R+TGSY + P +
Sbjct: 84 TMLIVSESGIYHLTFKSTKRKAKDFRRWVTHEVLPQIRRTGSYGKSGMRSDHDEPAMTGE 143
Query: 118 SASTVLRV 125
+ R+
Sbjct: 144 EKELLSRL 151
>gi|308048839|ref|YP_003912405.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
gi|307631029|gb|ADN75331.1| prophage antirepressor [Ferrimonas balearica DSM 9799]
Length = 260
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 5 TPFEFESNKIRTIVD-KDQNIWFVAKDVATALGYENSNEAINAHCKG---VAKRYPLKTE 60
F F + IR I D KD +FVAKDVA ALG++ + A+ H V KR
Sbjct: 118 QLFNFNTASIRVIPDFKDGQPYFVAKDVAEALGFDRPSNALKCHTTDAVVVTKRDLSLES 177
Query: 61 G--------------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
G G ++ +I E D+YRL+++S LPSAQ F+ WV + VLP +RK G+
Sbjct: 178 GPRYQELSASLFQGIGQYRIALIPESDLYRLVMRSNLPSAQDFQDWVCKTVLPAIRKDGA 237
Query: 107 YSVEAPKLRATSAST 121
Y + K+ S
Sbjct: 238 YVMGEEKVATGEMSE 252
>gi|167856689|ref|ZP_02479375.1| putative antirepressor protein [Haemophilus parasuis 29755]
gi|167852188|gb|EDS23516.1| putative antirepressor protein [Haemophilus parasuis 29755]
Length = 229
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL---- 57
+ ++ F FE + IR I + WFVAKDV LG +N +A+ + + +
Sbjct: 5 TQLSTFNFEQSSIRVIAVNN-EPWFVAKDVCDTLGIKNPTQALENLDEDERAMFNIGLDQ 63
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSY-SV 109
+ + ++ I+SE +Y L+++ + +F +WV EVLP +RKTG Y +
Sbjct: 64 RVNFDNRVSEINIVSESGMYTLILRCRDAVKKGSVPHRFRKWVTAEVLPQIRKTGRYQAT 123
Query: 110 EAPKLRATSASTVLRVHKHLE 130
E P+ + + L+ + ++
Sbjct: 124 ERPQPKEQEFTHTLKNSEAVD 144
>gi|329113762|ref|ZP_08242535.1| Hypothetical protein APO_0538 [Acetobacter pomorum DM001]
gi|326696918|gb|EGE48586.1| Hypothetical protein APO_0538 [Acetobacter pomorum DM001]
Length = 236
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+ I T FE +++ V+ D W + + V L + A+ + + +
Sbjct: 1 MTPISNTAMTFEGHELE-WVECDGRPWLLGRAVCDVLEIQRHRSALEKLDENEKRLVTIP 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG QKV +SE +Y L S P A++F RWV EEVLP +R+TG Y + +
Sbjct: 60 TAGGPQKVVAVSESGLYYLTFASRKPVAKRFRRWVTEEVLPQIRRTGEYRPDKGQDDVDL 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
S L E+L A LK+ + VT++ G
Sbjct: 120 RSAGL----TQEDLRLLAELKEGDIYQATRHLVTRMNG 153
>gi|223039722|ref|ZP_03610007.1| gp36 [Campylobacter rectus RM3267]
gi|222878914|gb|EEF14010.1| gp36 [Campylobacter rectus RM3267]
Length = 257
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 21/229 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN---EAI-NAHCKGVAKRYP 56
M+ + F+ ++ +IR V + + F DV L N++ AI + G++ YP
Sbjct: 1 MN-LEIFKNDNFEIRVAVGEAGDPLFCLADVCKILDLTNASVVKNAITSEFDDGLSLTYP 59
Query: 57 L-KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+ + G Q I+EP +Y +L++S P+A+ F +WV EVLP++RK G Y +
Sbjct: 60 IFDSLGREQNATFITEPQLYFVLMRSDKPNARSFRKWVNIEVLPSIRKHGGYLTQKKIDE 119
Query: 116 A-TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+ T++++ L K K +L + + IT +EA
Sbjct: 120 VLSDPDTIIKLALDL----KAQRAKTQELEREKAANLPYITFAKAVEAS----------A 165
Query: 175 EYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ I + L +R R K L + +P K + G
Sbjct: 166 TSINIGDYAKALCDDKRIRVGQKRLFSWLRDSGYLQKDNKPYQKYVDNG 214
>gi|281491981|ref|YP_003353961.1| phage antirepressor [Lactococcus lactis subsp. lactis KF147]
gi|281375690|gb|ADA65194.1| Phage protein, antirepressor [Lactococcus lactis subsp. lactis
KF147]
Length = 258
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 21/247 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + + + KI V+ F+AKD+A + + ++E + P+
Sbjct: 1 MNELQNIDGFNAKIYGTVEN---PLFLAKDIAELIEHSRASEMLKTVDDDEKLMQPILAS 57
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLRATSA 119
G + + ++E +Y +L+ S P A+ F++ V +E+L T+RK G+Y E + TS
Sbjct: 58 GQNRNMWFLTEDGLYEVLMSSKKPQAKIFKKKV-KEILKTIRKHGAYMTNEVIEKTLTSP 116
Query: 120 STVLRVHKHL---EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++++ L +E + +++QL L + K+ ++ +
Sbjct: 117 DFIIQLATKLKDEQEARLELEKENSQLSLDLAEANKKLPFLEW----------ALQTKGL 166
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
+T T I ++ + A +LN L K+G+Q + + K +++G ++
Sbjct: 167 VTPTIIAKKYG--KTAIWLNNWLHKQGVQFKQ-GKCWVLYKKYDDKGYSDTIFSPTDIDH 223
Query: 237 STQQLKW 243
+KW
Sbjct: 224 LHPSMKW 230
>gi|301300663|ref|ZP_07206852.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851771|gb|EFK79466.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 328
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 37/248 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ + F ++ I + + I+F + A LG +NSN+ + + V K
Sbjct: 1 MNELK-FSNGDVDLK-IKEINGEIYFDVEQSAVGLGIFLEKNSNKYVR--WERVRKYLN- 55
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
++K ISEPD Y L +K+ A+KF+ WV EVLP++RK G+Y +
Sbjct: 56 --SPQVEKGDYISEPDFYTLAIKANNSVAEKFQYWVTHEVLPSIRKHGAYMTDEKADDVI 113
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ + L++ A+Q KD Q+ + L+ K+ N +
Sbjct: 114 NRQG---LADLLQQAAEQLNAKDKQI--------------EALQPKADKYDRYLSNKGLI 156
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG--GKMCDVPMQHVE 235
TIT+I + R LNK L ++G+ + + K G G +P
Sbjct: 157 TITEIAKEYG--MSGRELNKFLHEKGIIYKR-GNKWFIYQKFANDGLVGYEIYMPEGRR- 212
Query: 236 GSTQQLKW 243
LKW
Sbjct: 213 ----SLKW 216
>gi|292397744|ref|YP_003517810.1| BRO-F [Lymantria xylina MNPV]
gi|291065461|gb|ADD73779.1| BRO-F [Lymantria xylina MNPV]
Length = 249
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 29/220 (13%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK----------TE 60
+I VD ++N+WF AK++A AL Y N+ ++I + K K
Sbjct: 34 FFEIYIFVDNNKNLWFKAKEIAQALDYNNTKQSIQINVNECDKTEWNKLGYTIDQLEIPS 93
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
K I+E +Y L+++S P AQ F+ WV EVLP+++KTG Y + + +A+S++
Sbjct: 94 NWHPKTIFINESGLYSLILRSKKPEAQHFKHWVTSEVLPSIKKTGKYDMCS---QASSST 150
Query: 121 TVLRVHKHLEELAKQA---GLKDNQLLLKVNRGVTKIT----GVDQLEAMDIKHLPSSDN 173
V+ K L + QA L + Q++ K + V ++ D L+ +IK
Sbjct: 151 EVVNYDKQLADAQIQALRLQLLNTQIIAKYDAQVAELNQQMVKYD-LQISEIKRNYEHQM 209
Query: 174 DEY--------LTITQIGERLNPPQRARFLNKLLLKRGLQ 205
EY L I Q+ N +N LL K ++
Sbjct: 210 AEYKKREHQMQLQIQQLTTAANMTMTQFAVNALLAKDNIE 249
>gi|283852564|ref|ZP_06369831.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
gi|283572012|gb|EFC20005.1| prophage antirepressor [Desulfovibrio sp. FW1012B]
Length = 323
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE----NSNEAINAHCKGVAKRYPL 57
S PF FES++IRT+++ D N WFVA+DV A+ S AI K V K
Sbjct: 13 SNPVPFAFESHEIRTVINGDGNPWFVARDVCAAMNISWQGMKSLSAIPDTWKRVGKLPTR 72
Query: 58 KTEGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+G Q V ISEP VY+L +S P A +F W+ EV+P LR+ G Y +
Sbjct: 73 TRDGRKQVNDVATISEPAVYKLAFRSNKPEADRFTNWIASEVIPALRRQGKYEICPTTGT 132
Query: 116 ATSASTVLRVHKHLEELAKQAG 137
T+ + ++EL +
Sbjct: 133 LTAGQ-----QQEIKELVQAKA 149
>gi|251779570|ref|ZP_04822490.1| antirepressor, phage associated [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243083885|gb|EES49775.1| antirepressor, phage associated [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 270
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 21/258 (8%)
Query: 1 MST-ITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---- 54
M+ I F + +IR + D F+ KDVA ALGY + A++ H KR
Sbjct: 1 MNNEIKVFSNNQFGQIRAFLLND-KPHFIGKDVAAALGYCDPKSAVSNHVDKEDKRIIQK 59
Query: 55 -YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EA 111
E + + +I+E +Y L++ S L A+KF+RWV EVLP++RK+G Y +
Sbjct: 60 GQITTLEIPNRGLTVINESGLYSLILSSKLQCAKKFKRWVTSEVLPSIRKSGGYIKIDDN 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ A ++ + + +K ++ K + + +D ++ I + S
Sbjct: 120 MSDKEIMAKALMVAQNTIHKKNTLLKIKGEEIEKKHRKLINTKRDLD-MKNKFINQIAVS 178
Query: 172 DNDEYLT-ITQIGERLNPPQRARFLNKLLLKRGLQVSK---------VSGGYRPTPKGEE 221
+N + + ++ + + L L K G G +
Sbjct: 179 ENSLLVREVAKVASKNGAIIGEKRLWNKLRKWGFIFKNSTEAKQEGIERGYFEIVEGSVT 238
Query: 222 RGGKMCDVPMQHVEGSTQ 239
K V G Q
Sbjct: 239 NREKTFIYKTTRVTGKGQ 256
>gi|158425230|ref|YP_001526522.1| putative prophage antirepressor [Azorhizobium caulinodans ORS 571]
gi|158332119|dbj|BAF89604.1| putative prophage antirepressor [Azorhizobium caulinodans ORS 571]
Length = 246
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 27/225 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATAL------GYENSNEAINAHCKGVAKR 54
M+ +TPF + + IR ++ D WFVA DV AL G + +G +
Sbjct: 1 MNALTPFNYRDHTIRVVI-LDGEPWFVAADVCRALEMPFGEGKGTVKRYLGGLLEGETRF 59
Query: 55 YP-------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
P T + ISE +YRL ++S P A F+ WV +EVLP +RK G Y
Sbjct: 60 VPKSSVHSDAPTSFPNRGTTCISESGLYRLTMRSNKPGALPFQNWVVQEVLPAIRKDGGY 119
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
+ A S + + L+ ++ + + ++ VD+ A +
Sbjct: 120 ILGEELHGAGLMSDDELLARALQVANRKLARVEAER--NYYADHYELVTVDEWRATSHLY 177
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
L QIG+ AR +L K Q +S
Sbjct: 178 LQHGQRV------QIGKV--ATALARNRGIILEK---QTRTLSDS 211
>gi|23501961|ref|NP_698088.1| BRO family protein [Brucella suis 1330]
gi|23347908|gb|AAN30003.1| BRO family protein [Brucella suis 1330]
Length = 134
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 1 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 57
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV + VLP +RK G Y K+
Sbjct: 58 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTQVVLPAIRKDGMYVRGEEKV 117
Query: 115 RATSAS 120
A
Sbjct: 118 SAGEMD 123
>gi|298381702|ref|ZP_06991301.1| anti-repressor protein [Escherichia coli FVEC1302]
gi|298279144|gb|EFI20658.1| anti-repressor protein [Escherichia coli FVEC1302]
Length = 241
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 1 MSTIT--PFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
M+ F+FES N IR+I+ D WFVA+DV +AL +N +A+ + +
Sbjct: 6 MANAQTAIFKFESVNPIRSII-IDGQPWFVAQDVCSALRIQNVTQALEKLDDDERSMFNI 64
Query: 58 K------TEGGIQKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGS 106
+ ++++ IISE +Y L+++ +F +WV EVLP +R+TGS
Sbjct: 65 GHEHRAIFDSRVKEINIISESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGS 124
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
Y K + V + A ++ ++ K
Sbjct: 125 Y----IKNSLPQEERIKIVADQVANATASAVMQAMKIENKTYSA 164
>gi|13242588|ref|NP_077602.1| EsV-1-117 [Ectocarpus siliculosus virus 1]
gi|13177391|gb|AAK14535.1|AF204951_117 EsV-1-117 [Ectocarpus siliculosus virus 1]
Length = 524
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 41/249 (16%)
Query: 1 MSTITPFEFES--NKIRTIVDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPL 57
M + F F + +K+ + D++ + F A D+ L +N I+ H A R
Sbjct: 1 MDILQTFVFNNTRHKVVILRDENDDPLFKASDIGKILSIKNIHTSMIDLHDDDKAIR-TA 59
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLR 115
T GG QK ++E VY+L+++S P A+ F+ WVF EVL T+RK G Y +E L+
Sbjct: 60 STPGGEQKTVFVTEKGVYKLIMRSRKPVAKPFQDWVF-EVLKTIRKRGKYVLEEEIAGLK 118
Query: 116 ATSASTVLRVHKHLEELAKQ----------------------------AGLKDNQLLLKV 147
A + + LA++ ++DN +L+K+
Sbjct: 119 RKHAEELADADADAKSLARKYIDAEDERMHKTLVQGFDNKTCIYFGKIQTMEDNSVLVKI 178
Query: 148 ----NRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRG 203
N V++ +M I + D Y + + N +R RF + KR
Sbjct: 179 GSTKNIRARTTGLVNEFGSMAIFRIFECDR--YEEFEKSLHKHNDIKRYRFKKPINGKRS 236
Query: 204 LQVSKVSGG 212
++V ++
Sbjct: 237 MEVFNMTKE 245
>gi|262040213|ref|ZP_06013465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259042450|gb|EEW43469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
Length = 200
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 11/157 (7%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK---- 58
I+ +FE +R IV+ WFV DV AL N A+ + L
Sbjct: 30 DISVIKFEGYTVR-IVNVYGEPWFVVSDVCQALEISNPTSAVASLDSDEVMTLTLTEGHS 88
Query: 59 -TEGGIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAP 112
GG + + +E Y+L+ +S S A +F WVF +V+P++RKTGSY V
Sbjct: 89 GKRGGARSWNMAAESGFYKLIARSRKASTPGTFAHRFSNWVFRDVIPSIRKTGSYGVPFA 148
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
L + + K + K + L
Sbjct: 149 FLNDHTRRKEIYTKKASKRGKDLQSCKGEKARLAAEE 185
>gi|254706730|ref|ZP_05168558.1| BRO family protein [Brucella pinnipedialis M163/99/10]
gi|254710163|ref|ZP_05171974.1| BRO family protein [Brucella pinnipedialis B2/94]
gi|254714162|ref|ZP_05175973.1| BRO family protein [Brucella ceti M644/93/1]
gi|254717597|ref|ZP_05179408.1| BRO family protein [Brucella ceti M13/05/1]
gi|256031658|ref|ZP_05445272.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|256061169|ref|ZP_05451322.1| BRO family protein [Brucella neotomae 5K33]
gi|256113637|ref|ZP_05454452.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|256159805|ref|ZP_05457545.1| BRO family protein [Brucella ceti M490/95/1]
gi|256255060|ref|ZP_05460596.1| BRO family protein [Brucella ceti B1/94]
gi|326409105|gb|ADZ66170.1| BRO family protein [Brucella melitensis M28]
Length = 184
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 130
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 131 SAGEMDLEELTLITLTRLQEKMKR 154
>gi|225627558|ref|ZP_03785595.1| BRO family protein [Brucella ceti str. Cudo]
gi|225852586|ref|YP_002732819.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|260168791|ref|ZP_05755602.1| BRO family protein [Brucella sp. F5/99]
gi|261219430|ref|ZP_05933711.1| BRO family protein [Brucella ceti M13/05/1]
gi|261222250|ref|ZP_05936531.1| BRO family protein [Brucella ceti B1/94]
gi|261314193|ref|ZP_05953390.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317718|ref|ZP_05956915.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321926|ref|ZP_05961123.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|261325173|ref|ZP_05964370.1| BRO family protein [Brucella neotomae 5K33]
gi|261758273|ref|ZP_06001982.1| BRO family protein [Brucella sp. F5/99]
gi|265988749|ref|ZP_06101306.1| BRO [Brucella pinnipedialis M292/94/1]
gi|265994999|ref|ZP_06107556.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|265998214|ref|ZP_06110771.1| BRO family protein [Brucella ceti M490/95/1]
gi|265999453|ref|ZP_05466455.2| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|225617563|gb|EEH14608.1| BRO family protein [Brucella ceti str. Cudo]
gi|225640951|gb|ACO00865.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|260920834|gb|EEX87487.1| BRO family protein [Brucella ceti B1/94]
gi|260924519|gb|EEX91087.1| BRO family protein [Brucella ceti M13/05/1]
gi|261294616|gb|EEX98112.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|261296941|gb|EEY00438.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301153|gb|EEY04650.1| BRO family protein [Brucella neotomae 5K33]
gi|261303219|gb|EEY06716.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738257|gb|EEY26253.1| BRO family protein [Brucella sp. F5/99]
gi|262552682|gb|EEZ08672.1| BRO family protein [Brucella ceti M490/95/1]
gi|262766112|gb|EEZ11901.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|263094067|gb|EEZ17989.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660946|gb|EEZ31207.1| BRO [Brucella pinnipedialis M292/94/1]
gi|326538811|gb|ADZ87026.1| BRO family protein [Brucella melitensis M5-90]
Length = 191
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|62289999|ref|YP_221792.1| hypothetical BRO family protein [Brucella abortus bv. 1 str. 9-941]
gi|62196131|gb|AAX74431.1| hypothetical BRO family protein [Brucella abortus bv. 1 str. 9-941]
Length = 177
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 7 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 63
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 64 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 123
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 124 SAGEMDLEELTLITLTRLQEKMKR 147
>gi|82699927|ref|YP_414501.1| hypothetical protein BAB1_1106 [Brucella melitensis biovar Abortus
2308]
gi|82616028|emb|CAJ11062.1| BRO family, N-terminal [Brucella melitensis biovar Abortus 2308]
Length = 171
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 1 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 57
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 58 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 117
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 118 SAGEMDLEELTLITLTRLQEKMKR 141
>gi|254689311|ref|ZP_05152565.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|254697445|ref|ZP_05159273.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254730342|ref|ZP_05188920.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|256257558|ref|ZP_05463094.1| BRO family protein [Brucella abortus bv. 9 str. C68]
gi|260883838|ref|ZP_05895452.1| BRO domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260873366|gb|EEX80435.1| BRO domain-containing protein [Brucella abortus bv. 9 str. C68]
Length = 184
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 130
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 131 SAGEMDLEELTLITLTRLQEKMKR 154
>gi|237815507|ref|ZP_04594504.1| BRO family, N-terminal domain protein [Brucella abortus str. 2308
A]
gi|260546553|ref|ZP_05822292.1| BRO family protein [Brucella abortus NCTC 8038]
gi|260754826|ref|ZP_05867174.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|260758043|ref|ZP_05870391.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|260761869|ref|ZP_05874212.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|297248400|ref|ZP_06932118.1| BRO family protein [Brucella abortus bv. 5 str. B3196]
gi|237788805|gb|EEP63016.1| BRO family, N-terminal domain protein [Brucella abortus str. 2308
A]
gi|260095603|gb|EEW79480.1| BRO family protein [Brucella abortus NCTC 8038]
gi|260668361|gb|EEX55301.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|260672301|gb|EEX59122.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674934|gb|EEX61755.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|297175569|gb|EFH34916.1| BRO family protein [Brucella abortus bv. 5 str. B3196]
Length = 191
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|256369511|ref|YP_003107021.1| BRO family, N-terminal domain protein [Brucella microti CCM 4915]
gi|255999673|gb|ACU48072.1| BRO family, N-terminal domain protein [Brucella microti CCM 4915]
Length = 191
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|150018030|ref|YP_001310284.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
gi|149904495|gb|ABR35328.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
Length = 250
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 21/219 (9%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M ++ F+ E +IR + + + V D+A ALGY+N +AI HCKGV K
Sbjct: 1 MESLRIFKDERFGEIR-WLKINNKDYAVGIDIAKALGYKNPRDAILRHCKGVVKHDIGVV 59
Query: 60 EGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G + ++ +I E D+YRL KS LP A+KFE W+F+EVLP++RKTG Y+ +
Sbjct: 60 TGKRRDGTEVIQNIEMSVIPEGDIYRLAAKSELPGAEKFEAWIFDEVLPSIRKTGMYATD 119
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ ++ L+E ++A L+ KV K D + +
Sbjct: 120 ELL---DNPDLLIAAATKLKE-ERKARLEAEN---KVKLLEPKGQFYDDVAGSKD-SIEV 171
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
+ L I IG N K+L K + +
Sbjct: 172 GHVAKVLAIRGIGR--NNLFSLLREKKVLDKNNIPYQQF 208
>gi|222148720|ref|YP_002549677.1| Prophage antirepressor protein [Agrobacterium vitis S4]
gi|221735706|gb|ACM36669.1| Prophage antirepressor protein [Agrobacterium vitis S4]
Length = 263
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 102/260 (39%), Gaps = 34/260 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
MS F+FE+ +R + D WFVA DV L ENS +A+ + L T
Sbjct: 1 MSGFLTFDFENQAVRA-FEHDGQEWFVAVDVCRCLRLENSRQALTRLSDDEKRSCNLNTL 59
Query: 60 -----------------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
G I++EP +YRL+ ST P A++ +R+VF EVLP LR
Sbjct: 60 TDSKGIIFNAINDSDGIRAGNPNATIVNEPGLYRLIFTSTKPEAERLKRFVFHEVLPALR 119
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
TG ++ E P + A L + + A+ A K+ L G+ + + E
Sbjct: 120 HTGCFAPE-PVIDWEIAREQLSLVRE----ARLAHGKEAAAALWRELGLP----MPKDET 170
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
D + + +Y+ I E + Q+A K + +R Q S + P
Sbjct: 171 SDKERRQAQGLMKYVY-DFIDECMVFDQKAEVTGKEVYQRYQQWSATNNA--PYIMNSSF 227
Query: 223 GGKMC---DVPMQHVEGSTQ 239
G + V GS
Sbjct: 228 GRFLIRAGIVKRHVSTGSRY 247
>gi|188581117|ref|YP_001924562.1| prophage antirepressor [Methylobacterium populi BJ001]
gi|179344615|gb|ACB80027.1| prophage antirepressor [Methylobacterium populi BJ001]
Length = 293
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 26/255 (10%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ ITPF+FE +R +V D FVA D+A +LGY ++ + + +
Sbjct: 17 MTASITPFDFEGTPVR-VVSVDGEPCFVASDLARSLGYRDAVNLVRVLDEDEVTTQIVS- 74
Query: 60 EGGIQKVRIISEPDVYRLLVKST---------LPSAQKFERWVFEEVLPTLRKTGSYSV- 109
+++ +++EP +Y + L +F+RWV +V+P++RKTG+YSV
Sbjct: 75 ---GREIMLVTEPGLYHAITARRQVKSLGAQVLERIARFKRWVHHDVIPSIRKTGAYSVR 131
Query: 110 EAPKLRATSASTVLRVHKHLEE--LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
+ P AS + V E + +A +++ L + V + + + +H
Sbjct: 132 QTPAFDPEDASALRHVLLGYTERVITLEAKVEEQAQGLAIAHEVIEQS---APKVEAYEH 188
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMC 227
L L L Q+ F L K + K P + G
Sbjct: 189 LLDDSGACCLA--DAARILGAEQKPFFA--WLRKSRIVFDK-GEALLPRADLRKDGRFRV 243
Query: 228 DVPMQHVEGSTQQLK 242
+ +Q
Sbjct: 244 RLVRTRPGEHREQTL 258
>gi|254704376|ref|ZP_05166204.1| BRO domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 184
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 130
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 131 SAGEMDLEELTLITLTRLQEKMKR 154
>gi|163843350|ref|YP_001627754.1| BRO domain-containing protein [Brucella suis ATCC 23445]
gi|261755049|ref|ZP_05998758.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|163674073|gb|ABY38184.1| BRO family, N-terminal domain protein [Brucella suis ATCC 23445]
gi|261744802|gb|EEY32728.1| BRO family protein [Brucella suis bv. 3 str. 686]
Length = 191
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|260889418|ref|ZP_05900681.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
gi|260860829|gb|EEX75329.1| toxin-antitoxin system, toxin component, Bro family [Leptotrichia
hofstadii F0254]
Length = 243
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 5 TPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
F E+ +RTI+ D +WF KDV L N + ++ L ++ GI
Sbjct: 18 QIFSKENLGSVRTILV-DNEVWFCIKDVCDILELTNPTVVAKRLDEDEVTKFNLGSKFGI 76
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
+E +Y L+++S A+ F +W+ EV+P +RKTG Y E K T A +L
Sbjct: 77 --TNFTNESGLYTLILRSDKKEAKPFRKWITSEVIPAIRKTGKY--EEKKKPLTQAELIL 132
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND--EYLTITQ 181
+ + + E + +N ++ N + +LE + + S+ Y I
Sbjct: 133 QQAQWMVEAESRINNIENNVIGLANTIEDNDKSIKRLENNQRRTVTSNHLTVIAYANIKG 192
Query: 182 IG-ERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
I + + P + K+ ++ L +
Sbjct: 193 IKPKSYHAPSIGKKATKICREKDLLIGTTVDS 224
>gi|161619034|ref|YP_001592921.1| BRO domain-containing protein [Brucella canis ATCC 23365]
gi|260566379|ref|ZP_05836849.1| BRO family protein [Brucella suis bv. 4 str. 40]
gi|161335845|gb|ABX62150.1| BRO family, N-terminal domain protein [Brucella canis ATCC 23365]
gi|260155897|gb|EEW90977.1| BRO family protein [Brucella suis bv. 4 str. 40]
Length = 191
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPKAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RATSAS 120
A
Sbjct: 138 SAGEMD 143
>gi|270692868|ref|ZP_06222953.1| hypothetical protein HAINFHK1212_1303 [Haemophilus influenzae
HK1212]
gi|270316010|gb|EFA28052.1| hypothetical protein HAINFHK1212_1303 [Haemophilus influenzae
HK1212]
Length = 169
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
+ WFVAKDV A+G +N+ +A+ A + T GG Q++ IISE +Y L
Sbjct: 3 TLINNEPWFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTLGGQQEMNIISESGMYTL 62
Query: 78 LVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL 132
+++ + +F +WV EVLPT+RKTG Y + TS + + + L
Sbjct: 63 ILRCRDAVKKGSIPHRFRKWVTAEVLPTIRKTGKYESK------TSVNDRTGLRNAVNML 116
Query: 133 AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ GL + + + V+ +E + ++ LP +
Sbjct: 117 VSRKGL----IYSDAYHLIHQRFNVESIEDLTLEQLPEAVE 153
>gi|261492257|ref|ZP_05988821.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312117|gb|EEY13256.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 196
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYPLKTE 60
+ I+ F F+SN +R + K+ +F DV + +NS ++ + T
Sbjct: 23 TQISTFNFKSNPVRIEIIKN-EPYFCLVDVCLVMNIQNSRRVNADMLNQEGVRKAYVPTT 81
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
G Q++ I+EP++YR++ KS A +F+ WVFEEVLP +RKTG Y +
Sbjct: 82 SGNQELTFINEPNLYRIIFKSRKAEAVEFQNWVFEEVLPQIRKTGKYQAQQQLALPEPPK 141
Query: 121 TVLR 124
R
Sbjct: 142 KYQR 145
>gi|18249879|ref|NP_543067.1| hypothetical protein P27p15 [Enterobacteria phage phiP27]
gi|18152346|emb|CAC83533.1| hypothetical protein [Enterobacteria phage phiP27]
Length = 274
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 92/239 (38%), Gaps = 22/239 (9%)
Query: 2 STITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
+ I F+F+S+ +R++V D WF A D+ ALG N+ ++ + K
Sbjct: 3 NNIKVFDFKSSTGELLSSVRSVV-IDSTPWFFAVDICNALGLTNTAISLQS-IDDEDKTE 60
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G +K +++E +Y L++KS A++F+RW+ EV+P++RKTG+Y +
Sbjct: 61 YKDYLGSGRKPLLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNYCLTTMTSL 120
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +E + N+ + V+R I ++ L + +
Sbjct: 121 PDFSDPAAAARAWADEYEAK-----NRAISYVHRQAQYIEHLENLFQPGMTPVQFCKQLN 175
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK--MCDVPMQ 232
+ + +I L L + + + + + D +
Sbjct: 176 GVNVQRITAFLEAH-------NWLYDERPESRSPAWRVKAYARDLYLTERHHYIDSGYE 227
>gi|170719065|ref|YP_001784220.1| prophage antirepressor [Haemophilus somnus 2336]
gi|168827194|gb|ACA32565.1| prophage antirepressor [Haemophilus somnus 2336]
Length = 204
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 1 MS-TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I+ F F+S +R V +F DVA+ LG N + + ++ T
Sbjct: 1 MSHQISTFNFKSFPVRIHV-LGSEPFFCLLDVASVLGLCNRSVSKFKFNPQGVEKLSTPT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G Q++ I+EP++YR++ +S P A +F+ WVFEEVLP +RKTG Y ++ +
Sbjct: 60 TSGDQEMIFINEPNLYRVIFRSNKPEAVEFQNWVFEEVLPQIRKTGKYQLKPKQFALPEP 119
Query: 120 S 120
Sbjct: 120 E 120
>gi|329121988|ref|ZP_08250598.1| phage antirepressor protein [Dialister micraerophilus DSM 19965]
gi|327467169|gb|EGF12677.1| phage antirepressor protein [Dialister micraerophilus DSM 19965]
Length = 109
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-LKTE 60
S + FE ++ + T+++KD +F+A +V T LGY N +A+ H K T
Sbjct: 3 SNLKTFENKNFEKLTVIEKDSEFFFIANEVVTMLGYVNPRKAVYDHVDEEDKDVTKWNTP 62
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
GGIQ + II+E +Y L+ S LP A+ F+ WV EVLP++RK
Sbjct: 63 GGIQNISIINESGLYSLIFSSKLPQAKIFKVWVIREVLPSIRK 105
>gi|310828999|ref|YP_003961356.1| phage antirepressor protein [Eubacterium limosum KIST612]
gi|308740733|gb|ADO38393.1| phage antirepressor protein [Eubacterium limosum KIST612]
Length = 306
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 1 MSTITP---FEFESNK-IRTIVD---KDQNI--WFVAKDVATALGYENSNEAINAHCKGV 51
M+ ++ FE E+ K IRT+ + WFVA+DV ALG++++ AI H +
Sbjct: 6 MNALSIEEVFEHETFKRIRTLTEMSGNGGEPQIWFVARDVCAALGFKDAGHAIKRHVERE 65
Query: 52 A--KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
KR L G +I+E +Y L + S LP+A++F+ +V +LP++ + G++
Sbjct: 66 DTAKRRILDPRGCHMPTTVINESGLYALSMGSRLPAARRFKHYVTSVILPSVCRHGAHIE 125
Query: 110 EAP----KLRATSASTVLRVHKHLEELAKQA--GLKDNQLLLKVNRGVTKITGVDQLEAM 163
+ ++ + T++ + + A L+ + + + + A
Sbjct: 126 DELLGRVQVDKAAFDTLIAALALAADGRRSAVEALEKSTAEAHKWQEAWRRQQPEAAFAR 185
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKL---LLKRGLQVSKVSGGYRPTPKGE 220
DIK + + +TI + + ++ + N+L + G + + PT +
Sbjct: 186 DIK-----TSADSITIGAMAKLIHHQVKDMGQNRLFAWMRANGYLCRRKAFWNDPTQRAL 240
Query: 221 ERG 223
E+G
Sbjct: 241 EQG 243
>gi|15320633|ref|NP_203477.1| hypothetical protein Mx8p63 [Myxococcus phage Mx8]
gi|15281743|gb|AAK94398.1|AF396866_63 p63 [Myxococcus phage Mx8]
Length = 245
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 5 TPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
PF FE +IR +VD+ WFVA+D+A AL Y +++ + + ++T G
Sbjct: 12 KPFLFEGSTRIRVVVDEAGEPWFVAQDIAHALEYRMASDLTRLLKPHHLRTHAVRTNRGE 71
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
+ IISEP +YR + S A+ F+ WV +VL ++RKTG+Y V +R A L
Sbjct: 72 RSATIISEPAMYRAVFLSKSKKAEPFQEWVTSDVLRSIRKTGAYGVPMAAIRQAVAERFL 131
Query: 124 RV 125
V
Sbjct: 132 GV 133
>gi|188496421|ref|ZP_03003691.1| BRO family, N- domain protein [Escherichia coli 53638]
gi|188491620|gb|EDU66723.1| BRO family, N- domain protein [Escherichia coli 53638]
gi|323172040|gb|EFZ57682.1| BRO family, N-terminal domain protein [Escherichia coli LT-68]
Length = 297
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 2 STITPFEFESN------KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
+ I F+F+S+ +R++V D WF A D+ ALG N+ ++ + K
Sbjct: 26 NNIKVFDFKSSTGELLSSVRSVV-IDSTPWFFAVDICNALGLTNTAISLQS-IDDEDKTE 83
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G +K +++E +Y L++KS A++F+RW+ EV+P++RKTG+Y +
Sbjct: 84 YKDYLGSGRKPLLVNESGLYALIIKSRKKQARRFKRWITSEVIPSIRKTGNYCLTTMASL 143
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +E + N+ + V+R I ++ L + +
Sbjct: 144 PDFSDPAAAARAWADEYEAK-----NRAISYVHRQAQYIEHLENLFQPGMTPVQFCKQLN 198
Query: 176 YLTITQIGERLNPP 189
+ + +I L
Sbjct: 199 GVNVQRITAFLEAH 212
>gi|118465500|ref|YP_880112.1| gp54 protein [Mycobacterium avium 104]
gi|118166787|gb|ABK67684.1| gp54 protein [Mycobacterium avium 104]
Length = 263
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 11/164 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYPLKT 59
MS + F +E +RT++ + WFVA D L ++ A+ H + T
Sbjct: 1 MSAVELFRYEGAHLRTVLVES-EPWFVAADACRMLSLRDTTSAMKMVHDDDKRLLHRSDT 59
Query: 60 EG-------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+Q + +++E +Y L+ +S A+ RWV EVLP++RKTGSY
Sbjct: 60 PQLFEGIAAQVQVITVVNESGMYALIFQSNKDRARDVRRWVTSEVLPSIRKTGSYGAPVL 119
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
+ +E L A + + + + TG
Sbjct: 120 TEDEIVHRALTITQARVEAL--TAKVVELAAPASAWNELAESTG 161
>gi|261752388|ref|ZP_05996097.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261742141|gb|EEY30067.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 191
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDYKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|254701830|ref|ZP_05163658.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 184
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDYKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKV 130
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 131 SAGEMDLEELTLITLTRLQEKMKR 154
>gi|256044742|ref|ZP_05447646.1| Phage-related DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 184
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP + K G Y K+
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLYVRGEEKV 130
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 131 SAGEMDLEELTLITLTRLQEKMKR 154
>gi|17987182|ref|NP_539816.1| Phage-related DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260565655|ref|ZP_05836139.1| BRO family protein [Brucella melitensis bv. 1 str. 16M]
gi|265991164|ref|ZP_06103721.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|17982850|gb|AAL52080.1| phage-related DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260151723|gb|EEW86817.1| BRO family protein [Brucella melitensis bv. 1 str. 16M]
gi|263001948|gb|EEZ14523.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
Length = 191
Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 21 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 77
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ I+SE +Y+L+++ST P A+KF+ WV VLP + K G Y K+
Sbjct: 78 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAILKDGLYVRGEEKV 137
Query: 115 RA---TSASTVLRVHKHLEELAKQ 135
A L L+E K+
Sbjct: 138 SAGEMDLEELTLITLTRLQEKMKR 161
>gi|188589251|ref|YP_001921887.1| antirepressor, phage associated [Clostridium botulinum E3 str.
Alaska E43]
gi|188499532|gb|ACD52668.1| antirepressor, phage associated [Clostridium botulinum E3 str.
Alaska E43]
Length = 270
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 21/258 (8%)
Query: 1 MST-ITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---- 54
M+ I F + +IR + D F+ KDVA ALGY + A++ H +R
Sbjct: 1 MNNEIKVFSNNQFGQIRAFLLND-KPHFIGKDVAAALGYCDPKSAVSNHVDKEDRRIIQK 59
Query: 55 -YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EA 111
E + + +I+E +Y L++ S L A+KF+RWV EVLP++RK+G Y +
Sbjct: 60 GQITTLEIPNRGLTVINESGLYSLILSSKLQCAKKFKRWVTSEVLPSIRKSGEYIKIDDN 119
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ A ++ + + +K ++ K + + +D ++ I + S
Sbjct: 120 MSDKEIMAKALMVAQNTIHKKNTLLKIKGEEIEKKHRKLINTKRDLD-MKNKFINQIAVS 178
Query: 172 DNDEYLT-ITQIGERLNPPQRARFLNKLLLKRGLQVSK---------VSGGYRPTPKGEE 221
+N + + ++ + + L L K G G +
Sbjct: 179 ENSLLVREVAKVTSKNGAIIGEKRLWNKLRKWGFIFKNSTEAKQEGIERGYFEIVEGSVT 238
Query: 222 RGGKMCDVPMQHVEGSTQ 239
K V G Q
Sbjct: 239 NREKTFIYKTTRVTGKGQ 256
>gi|270702410|ref|ZP_06223066.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270315833|gb|EFA27940.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 149
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+ WFVAKDV A+G +N+ +A+ A + T GG Q++ IISE +Y L++
Sbjct: 17 INNEPWFVAKDVCDAIGIDNNRKALLALDEDEKGVTLSYTLGGQQEMNIISESGMYTLIL 76
Query: 80 KSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
+ + +F +WV EVLPT+RKTG Y + T + +
Sbjct: 77 RCRDAVKKGSIPHRFRKWVTAEVLPTIRKTGKYESKTSVNDRTGLRNAVNML 128
>gi|168756431|ref|ZP_02781438.1| Gp27 [Escherichia coli O157:H7 str. EC4401]
gi|168770147|ref|ZP_02795154.1| Gp27 [Escherichia coli O157:H7 str. EC4486]
gi|195937930|ref|ZP_03083312.1| antirepressor [Escherichia coli O157:H7 str. EC4024]
gi|189356511|gb|EDU74930.1| Gp27 [Escherichia coli O157:H7 str. EC4401]
gi|189361009|gb|EDU79428.1| Gp27 [Escherichia coli O157:H7 str. EC4486]
gi|326338722|gb|EGD62542.1| Phage antirepressor protein [Escherichia coli O157:H7 str. 1125]
Length = 193
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-G 61
+ F+S +R +V + + WFVAKDV AL NS +A+ A K L
Sbjct: 24 DLVVLRFDSVNVR-VVYLNGDPWFVAKDVCVALEISNSRDALKALDADEKKTVALSYGIR 82
Query: 62 GIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G +ISE Y+L+ +S A +F WVF V+P +RKTG+Y + L+
Sbjct: 83 GNPNHSLISESGFYKLIARSRKAVTPGTFAHRFSNWVFRNVIPGIRKTGAYGIPWGALQD 142
Query: 117 TSAST 121
S
Sbjct: 143 FSRRK 147
>gi|192291449|ref|YP_001992054.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
gi|192285198|gb|ACF01579.1| prophage antirepressor [Rhodopseudomonas palustris TIE-1]
Length = 270
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 31/226 (13%)
Query: 1 MSTIT--PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M+ +T PF+FE +R +V++ WFVA DVA LGY + + P+
Sbjct: 1 MTELTVSPFQFEGRNVR-LVEQGGETWFVATDVARELGYGLATDLTKHLDVDEKGMCPVH 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQ---------KFERWVFEEVLPTLRKTGSYS- 108
T GG Q + +ISEP +YR +V+ +F+RWVF ++LPTLRK G Y
Sbjct: 60 TPGGEQALAVISEPGLYRAIVQRKTNKKHDGALTEKIGRFQRWVFHDILPTLRKHGRYEV 119
Query: 109 ------VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
V T+ + R E + A K + L +V+ K +D +
Sbjct: 120 APPIAPVPPALPDFTNPAVAARAWAEQFEGREIAETKASALEGRVSELAPKADALDLI-- 177
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSK 208
+ + IT + L ++ F L +R +
Sbjct: 178 --------ASASGSMCITDAAKALQLRPKSLFT--FLRQRDWIYRR 213
>gi|317051595|ref|YP_004112711.1| BRO domain-containing protein [Desulfurispirillum indicum S5]
gi|316946679|gb|ADU66155.1| BRO domain protein [Desulfurispirillum indicum S5]
Length = 511
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 1 MS--TITP--FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKR 54
MS + F ++ +RT D F D+ TAL + NS +A+ V R
Sbjct: 1 MSGTNLQTIEFNYDGIPVRT-DIVDGEPLFNVNDLCTALEHTNSRKALKDLVDAEDVTVR 59
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
Y L + GG QK ++E ++ L++ S +A+K +RWV EVLP++R+ G+Y + +L
Sbjct: 60 YTL-SPGGKQKANFVTESGMWALILGSRTQAAKKVKRWVTSEVLPSIRRHGAYHRDDAEL 118
>gi|301046392|ref|ZP_07193552.1| BRO family protein [Escherichia coli MS 185-1]
gi|300301618|gb|EFJ58003.1| BRO family protein [Escherichia coli MS 185-1]
Length = 279
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV D N WFVAKDV AL N +I + ++ L +G
Sbjct: 59 SVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLGRQG-- 115
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ II+E +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 116 -ETNIINESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 170
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 171 EERIKMVADQVANATASAVMQAMKIENKTYSA 202
>gi|28210773|ref|NP_781717.1| kilA protein, putative phage-related DNA binding protein
[Clostridium tetani E88]
gi|28203211|gb|AAO35654.1| kilA protein, putative phage-related DNA binding protein
[Clostridium tetani E88]
Length = 270
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 107/254 (42%), Gaps = 30/254 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKD-------QNIWFVAKDVATALGYENSNEAINAHCKGVAK 53
M+++ + R +++K+ +N F+AKDVA + + + +
Sbjct: 4 MNSLRVID-----QREVLNKNFKIYGNIENPLFLAKDVAECIEHSKPSVMLEGIDTQEKL 58
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ + T G +++ ++E +Y +L++S P A++F++ V +E+L +RK G Y A
Sbjct: 59 KETIFTSGQNREMWFLTEDGLYEVLMQSRKPIAKQFKKKV-KEILKDIRKHGMY---AKD 114
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ +++V L+E + + + Q N+ +I G +L+ N
Sbjct: 115 ELLDNPDLLIQVATKLKEEKAKNKMLELQ-----NKQKEQIIG--ELKPRADYTDRILKN 167
Query: 174 DEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQ 232
+TITQI + LNKLL + +Q + + + + +G + +
Sbjct: 168 KGLVTITQIAKDYGMTGTG--LNKLLHELKVQYKQ-NDQWLLYKEHSGKGYTHSETIDIV 224
Query: 233 HVEGSTQ---QLKW 243
+G KW
Sbjct: 225 RSDGRPDVKMNTKW 238
>gi|237795787|ref|YP_002863339.1| anti-repressor [Clostridium botulinum Ba4 str. 657]
gi|229262818|gb|ACQ53851.1| anti-repressor [Clostridium botulinum Ba4 str. 657]
Length = 287
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 100/263 (38%), Gaps = 34/263 (12%)
Query: 2 STITPFEFESNKIRTIVDKD------QNIWFVAKDVATALGYENSNEAINAHCKGVA--K 53
+ + F F+ I + +D + K LGY +++ + +
Sbjct: 3 NELQVFRFKGQAIDILTKEDVNFEFDGDFLIHGKQTVQNLGYSENSKPLRELEEDEKYLV 62
Query: 54 RYPLKTEGGIQKVR-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ + +K+ I+E +Y L S L SA++F +WV +EVLP++R+ G+Y
Sbjct: 63 KNSDVLKQHYRKLNNAGEIFITESGLYSLAFNSKLQSAKEFTKWVKKEVLPSIRRHGAYM 122
Query: 109 VEAPKLRATSAST----VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
E + +L K +E K+ L++ Q + K D++
Sbjct: 123 TENVLDEVINNPDFGIKLLTELKKEKEEKKKLQLQNKQKDQLIGELKPKADYTDRI---- 178
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG- 223
N +T TQI + A+ +NKLL +Q + SG + K +G
Sbjct: 179 ------LKNKGLVTTTQIAKDYG--MSAQEMNKLLHDLKVQYKQ-SGQWLLYSKYHNKGY 229
Query: 224 GKMCDVPMQHVEGSTQQ---LKW 243
+ + +G+ KW
Sbjct: 230 THSETIDIVRSDGTPDITMNTKW 252
>gi|324008543|gb|EGB77762.1| BRO family protein [Escherichia coli MS 57-2]
Length = 228
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV D N WFVAKDV AL N +I + ++ L +G
Sbjct: 8 SVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLGRQG-- 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ IISE +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 65 -ETNIISESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 120 EERIKMVADQVANATASAVMQAMKIENKTYSA 151
>gi|300898444|ref|ZP_07116785.1| BRO family protein [Escherichia coli MS 198-1]
gi|300357911|gb|EFJ73781.1| BRO family protein [Escherichia coli MS 198-1]
Length = 228
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 5 TPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
+ F FES IR IV D N WFVAKDV AL N +I + ++ L +G
Sbjct: 8 SVFHFESEATIRAIV-IDGNPWFVAKDVIKALQLTNPTMSIKSLDDDERAKFNLGRQG-- 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ II+E +Y L+++ +F +WV EVLP +R+TGSY K
Sbjct: 65 -ETNIINESGLYTLILRCRDAVTPGTIPYRFRKWVTGEVLPQIRRTGSY----IKNSLPQ 119
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
+ V + A ++ ++ K
Sbjct: 120 EERIKIVADQVANATASAVMQAMKIENKTYSA 151
>gi|307826181|ref|ZP_07656392.1| prophage antirepressor [Methylobacter tundripaludum SV96]
gi|307732820|gb|EFO03686.1| prophage antirepressor [Methylobacter tundripaludum SV96]
Length = 193
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 1 MSTIT----PFEFESNKIRTIVDKDQNIWFVAKDVATALGY-----ENSNEAINAHCKGV 51
MS + PF+F IRT D+ +WF AKDV TAL + E + + KGV
Sbjct: 1 MSQLKTLANPFQFSELDIRTATDEHSEVWFNAKDVCTALDIVWSGSSATLENMPENWKGV 60
Query: 52 AKRYPLKTE----GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K E GG Q+ I+E +Y L+ +S P A++F WV E VLP +RKTG +
Sbjct: 61 WKLQTPSAENGRGGGEQEAVFINEAGLYHLIFRSNKPKAKEFANWVCETVLPEIRKTGFF 120
Query: 108 SVEAPKLRATSASTVLRVHKHL 129
K + + + + + +
Sbjct: 121 GTIDIKDQISISKQIESLSLQI 142
>gi|317505859|ref|ZP_07963701.1| BRO family domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
gi|316255839|gb|EFV15067.1| BRO family domain-containing protein [Segniliparus rugosus ATCC
BAA-974]
Length = 316
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--NAHCKGVAKRYPLKTEGGIQ 64
F++ IR I+ WFV D++ ALG A GV + Y + + G +
Sbjct: 38 FDWNGYLIRVIM-NHSEPWFVLSDLSKALGLSRKPAATAERLDPDGVRQTYTIDSLGRKR 96
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
+V +I E +Y+L+++S P A++F+RW+ EVLP +R+TG Y P A S +
Sbjct: 97 QVTVIDESAMYQLVIRSDKPEAKEFQRWITREVLPQIRRTGMY---LPTTSADPYSVMRA 153
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRG 150
+ LE + ++A + R
Sbjct: 154 MLDQLESVDRKAAEAKEIAVRAGERT 179
>gi|268592743|ref|ZP_06126964.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
gi|291311519|gb|EFE51972.1| toxin-antitoxin system, toxin component, Bro family [Providencia
rettgeri DSM 1131]
Length = 198
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GG 62
I+ FE ++R IV+ WFVAKDV AL NS A+ A L G
Sbjct: 31 ISTIRFEDVQVR-IVNIKNEPWFVAKDVCDALEIINSRGALKALDLDEKNTVALNYGIQG 89
Query: 63 IQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+II+E Y+L+ +S A +F WVF EV+P++RKTG+Y V +L A
Sbjct: 90 NPNRQIIAESGFYKLIARSRKAVTKDTFAYRFSNWVFREVIPSIRKTGAYGVPFAELNAF 149
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLK 146
S + + K + L+
Sbjct: 150 SQRQEQYKIESSQYGRDLQACKKKKAELQ 178
>gi|257459288|ref|ZP_05624402.1| phage antirepressor protein [Campylobacter gracilis RM3268]
gi|257443301|gb|EEV18430.1| phage antirepressor protein [Campylobacter gracilis RM3268]
Length = 293
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 19/187 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------- 53
M+ + F+ +IR + +FVA D+++ LGY N+ +
Sbjct: 25 MN-LEIFKNSKFEIRG-GLINGEPYFVANDISSLLGYANTYAMLERLDDDEKTNLKDLLK 82
Query: 54 ------RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ +G ++SE +Y ++ S P A++F RWV EVLP +RK G Y
Sbjct: 83 SRMPEISDLPRIDGVRYDAVLLSESGLYNAILWSEKPQAKEFRRWVTGEVLPAIRKHGGY 142
Query: 108 SVEAPKLRA-TSASTVLRVHKHLE-ELAKQAGLKDNQLLLKVNRGVTKI--TGVDQLEAM 163
A + T++ + ++L+ E AK+ L+ + K VD +
Sbjct: 143 LTPAKIEEVLSDPDTIIALAQNLKTERAKRKQLEAEKAANAGYVSFAKSVEASVDSILIG 202
Query: 164 DIKHLPS 170
+ L S
Sbjct: 203 NYAKLLS 209
>gi|114679905|ref|YP_758355.1| bro-e [Leucania separata nuclear polyhedrosis virus]
gi|39598636|gb|AAR28822.1| bro-e [Leucania separata nuclear polyhedrosis virus]
Length = 354
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 35/260 (13%)
Query: 1 MSTITPFEFESNKI----RTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-------- 48
M T+ +F+ I R +D+D +WFV +D+A L Y+ + +AI H
Sbjct: 28 MCTVVVRDFKFGDITMRLRYTIDQDNCVWFVGRDIAKLLKYQRTQDAIKKHVNVKYKALI 87
Query: 49 ----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
A+ + +I++ V +L++ S LP A + + W+ EEV+P + T
Sbjct: 88 KHSPDYDAESSSDSETNLHPQTVLINKSGVIQLIMHSKLPYAVELQEWLLEEVIPQVLST 147
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y E ++ + V E LK + LK + V K + +L
Sbjct: 148 GRYVCETAPSKSVNDCQSQTVVLLQEISQTMGQLKRDNEDLKKS-LVAKDETLKRLATNK 206
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGG 224
K QI L R R KLL + QVS++ P+ E +
Sbjct: 207 DK--------------QIDRLLGDLTRYR---KLLYYKEEQVSELREKTVEYPRCEYKQP 249
Query: 225 KMCDVPMQHV-EGSTQQLKW 243
+C Q V T Q KW
Sbjct: 250 YLCISKRQTVFTAITGQRKW 269
>gi|309702795|emb|CBJ02126.1| putative phage anti repressor protein [Escherichia coli ETEC
H10407]
Length = 230
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 1 MST-ITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YP 56
M+T + F FES+ +IR + D WFV KDV AL + +A KG K+ Y
Sbjct: 1 MNTKPSIFSFESSCQIRMFM-IDGEPWFVTKDVCNALNI-DVTQARKLDKKGWNKKGLYS 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLP-----SAQKFERWVFEEVLPTLRKTGSYSVEA 111
++T GGIQ++ I+SE +Y L+++ A +F WV EVLP +R+TGSY
Sbjct: 59 IQTPGGIQELSIVSESGLYILILRCKEAMTEGTRAFRFLEWVTGEVLPQIRRTGSY---- 114
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
K + V + A ++ ++ K
Sbjct: 115 IKNSLPQEERIKMVADQVANATASAVMQAMKIENKTYSA 153
>gi|37526773|ref|NP_930117.1| hypothetical protein plu2883 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786205|emb|CAE15257.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 314
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 14/231 (6%)
Query: 2 STITPFEFESN--KIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK---- 53
S I FEF+S+ ++ T+ + F A ++A LGY N ++A+ HCK + K
Sbjct: 65 SIIKHFEFKSSNDQLVTVSGLKYKGKPVFFAVELAEGLGYTNPSKALKDHCKSLIKLNYN 124
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L + V + + D++RL+++S LPSA++F+ WV E VLP++ +TGSYS++
Sbjct: 125 DSLELGLGDNPRGVILAGQSDMFRLVMRSNLPSAERFQDWVCEAVLPSIMETGSYSIKQS 184
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
+ + ++ + L N L + V+ + + LP+ +
Sbjct: 185 QSGLPEYRKARTLKMSVDAITNLFELMPN--LSNEAKQCAAANIVNPIVGFEAVPLPALE 242
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
Y T ++G+ L+ A + ++ L+ + + ++
Sbjct: 243 EK-YYTAGEVGKMLDL--SANKIGRIANDHNLKTEQHGKFFLDKSAYSDKQ 290
>gi|167833750|gb|ACA02626.1| BRO-A [Spodoptera frugiperda MNPV]
gi|319997404|gb|ADV91302.1| bro [Spodoptera frugiperda MNPV]
Length = 334
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 48/261 (18%)
Query: 1 MSTITP--FEFESNKI--RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+++ F+F +I R ++ + ++FV KD+AT L YEN+ +AI H K
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIAF 60
Query: 57 LKTEG-------------------------GIQKVRIISEPDVYRLLVKSTLPSAQKFER 91
+ + +I++ V +L++KS L A + +
Sbjct: 61 GDIKTLMPSVIVNARLLKINNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQE 120
Query: 92 WVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGV 151
W+FEEV+P + TG YS P+ T ++ KH + K KD Q V +
Sbjct: 121 WMFEEVIPQVLCTGKYS---PQAALTEEKEIV---KHFQVQMKN---KDEQ----VQNLI 167
Query: 152 TKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQVSKV 209
+++ V + + I+ L ++ N+ Y + + N Q+ + +NKLL K V
Sbjct: 168 VQLSKVTEHKNAMIEKLLNNVNNMYTKLQDTVSKTNEIMLQKDKQINKLLDKL----DDV 223
Query: 210 SGGYRPTPKGEERGGKMCDVP 230
S P + + +C
Sbjct: 224 SERVVQYPADDTKMPMICIAK 244
>gi|125860191|ref|YP_001036361.1| BRO [Spodoptera frugiperda MNPV]
gi|120969336|gb|ABM45779.1| BRO [Spodoptera frugiperda MNPV]
Length = 334
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 48/261 (18%)
Query: 1 MSTITP--FEFESNKI--RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+++ F+F +I R ++ + ++FV KD+AT L YEN+ +AI H K
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGDNDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIAF 60
Query: 57 LKTEG-------------------------GIQKVRIISEPDVYRLLVKSTLPSAQKFER 91
+ + +I++ V +L++KS L A + +
Sbjct: 61 GDIKTLMPSVIVNARLLKINNLLPCPNVLYVHPQTIMINKSGVIQLIMKSKLSYAVELQE 120
Query: 92 WVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGV 151
W+FEEV+P + TG YS P+ T ++ KH + K KD Q V +
Sbjct: 121 WMFEEVIPQVLCTGKYS---PQAALTEEKEIV---KHFQVQMKN---KDEQ----VQNLI 167
Query: 152 TKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQVSKV 209
+++ V + + I+ L ++ N+ Y + + N Q+ + +NKLL K V
Sbjct: 168 VQLSKVTEHKNAMIEKLLNNVNNMYTKLQDTVSKTNEIMLQKDKQINKLLDKL----DDV 223
Query: 210 SGGYRPTPKGEERGGKMCDVP 230
S P + + +C
Sbjct: 224 SERVVQYPADDTKMPMICIAK 244
>gi|90592794|ref|YP_529747.1| BRO-B [Agrotis segetum nucleopolyhedrovirus]
gi|71559244|gb|AAZ38243.1| BRO-B [Agrotis segetum nucleopolyhedrovirus]
Length = 350
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 36/255 (14%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG----------- 50
I F+F + ++R +VD D + FV KD+A L YEN +AI H
Sbjct: 6 IGVFKFGEDEFELRYVVDNDMQVLFVGKDIARVLKYENHEQAIRKHVDEKYKCFFEKQGA 65
Query: 51 -------VAKRYPLKTEGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
K + E Q + +I++ V +L++KS LP A + + W+ E
Sbjct: 66 KNEHLAQFDKNKSIIREVVKQGDPLYLHPQTILITKSGVIQLIMKSKLPYAVELQEWLLE 125
Query: 96 EVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
EV+P + TG Y+ + + LR++K + + ++ + QL ++ + +
Sbjct: 126 EVIPQVLCTGKYT--SAIIDGDDEKQALRLYKDFQAVVQKKDEQLQQLTARIQQMAEQKD 183
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIG--ERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
V D+ + + ++ + Q+ ++KLL K + +SG
Sbjct: 184 QVIHRIMNDLNRMYTGFQSNMAKKDELMSQKDNMMQQKDEQVSKLLDK----MVDLSGRV 239
Query: 214 RPTPKGEERGGKMCD 228
P +++ +C
Sbjct: 240 VHYPANDKKLPMICI 254
>gi|224582866|ref|YP_002636664.1| hypothetical protein SPC_1057 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224467393|gb|ACN45223.1| hypothetical protein SPC_1057 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 261
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 2 STITPFEFESNKIRTIVDK----DQNIWFVAKDVATALGYENSNEAINAHCKGVAK---- 53
S I FEF+S++ + F+A +A ALGY N +A+ HCK + K
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG-------VDQLEAMDI 165
K + L + L+ LA + + + L+ + + I+ ++ + D
Sbjct: 123 KTSSGLPEYRLAKAEQLKALALEKNIASARELMVMLPRLDPISHQTLAASLINPIIGYDA 182
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
LP + Y T + GE++ A + ++ L+ + + +
Sbjct: 183 IPLP-VIEEHYYTAAEAGEKIGV--SANKIGRIANANNLKTEQYGKFFLDKSAHSSKQ-- 237
Query: 226 MCDVPMQHVEG 236
+ + EG
Sbjct: 238 -VEAFRYNAEG 247
>gi|163759897|ref|ZP_02166981.1| BRO, N-terminal [Hoeflea phototrophica DFL-43]
gi|162282855|gb|EDQ33142.1| BRO, N-terminal [Hoeflea phototrophica DFL-43]
Length = 154
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPLKTEGGIQKVR 67
IR + D N WFVA DV ALG + + + L T+GG
Sbjct: 18 FTAIRVVT-LDGNPWFVAADVCRALGLTTYGGATRHMRNLNQNEVGNAQLSTKGGKPNAT 76
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+SE +Y+L+++S P A+ F+ WV +VLP +RK G Y P
Sbjct: 77 -VSESGLYKLIMRSDKPEAKAFQDWVTRDVLPAIRKDGGYVPIPP 120
>gi|150017135|ref|YP_001309389.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
gi|149903600|gb|ABR34433.1| prophage antirepressor [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 1 MSTITPFEFE-SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M + F+ E +IR + +++ + V D+A ALGY+ N+AI+ HC+G K
Sbjct: 1 MGGLLIFKNERFGEIRWVKINNKD-YAVGIDIAKALGYKKPNDAISRHCRGSVKHGVGVV 59
Query: 60 EG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G ++ +I E D+YRL+ KS LP A+KFE W+F+EVLP +RKTG Y+ +
Sbjct: 60 TGKRKDGTDAIQNVEMSVIPEGDIYRLVAKSELPGAEKFEAWIFDEVLPCIRKTGMYATD 119
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL 145
+ ++ L+E K +N++ L
Sbjct: 120 ELL---DNPDLLIAAATKLKEERKARLEAENKVKL 151
>gi|220903506|ref|YP_002478818.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867805|gb|ACL48140.1| prophage antirepressor [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 180
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN--------EAINAHCKGVAKRYPLK 58
F F ++ +R D+ +WFVAKDVA AL Y+ S+ ++I KG+ P+K
Sbjct: 8 FVFGNSDVRVAQDETGVLWFVAKDVAEALEYQESSITQIINLVQSIPEEWKGLK---PIK 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q+V ++EP +Y L +S P A F++W++ EVLP++RKTG Y + +L
Sbjct: 65 TLGGRQEVHCLAEPGLYWFLGRSDKPKALPFQKWIYGEVLPSIRKTGGYDL---RLNMDE 121
Query: 119 ASTVLRV 125
++R+
Sbjct: 122 VKQIVRL 128
>gi|167993641|ref|ZP_02574735.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205328358|gb|EDZ15122.1| BRO family, N- domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
Length = 261
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 22/251 (8%)
Query: 2 STITPFEFESNKIRTIVDK----DQNIWFVAKDVATALGYENSNEAINAHCKGVAK---- 53
S I FEF+S++ + F+A +A ALGY N +A+ HCK + K
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG-------VDQLEAMDI 165
K + L + L+ LA + + + L+ + + ++ ++ + D
Sbjct: 123 KTSSGLPEYRLAKAEQLKALALEKNIASARELMVMLPRLDPMSHQTLAASLINPIIGYDA 182
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
LP + Y T + GE++ A + ++ + L+ + + +
Sbjct: 183 IPLP-VIEEHYYTAAEAGEKIGV--SANKIGRIANENNLKTEQYGKFFLDKSAHSSKQ-- 237
Query: 226 MCDVPMQHVEG 236
+ + EG
Sbjct: 238 -VEAFRYNAEG 247
>gi|285002410|ref|YP_003422474.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343670|gb|ACH69485.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 241
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ------------- 64
V+KD N + +A LGY+ +AI H K K + EG I
Sbjct: 22 VEKD-NFMYGGHGIAHVLGYKQPKDAIRNHVKPQWKTNWEEIEGAINHRPLMTSLDQDNI 80
Query: 65 ------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
ISE VY L++KS LP+A++F+RW+FEEVLP LRK+G YS++
Sbjct: 81 PVNWQPNTVFISEAGVYALIMKSKLPAAEEFQRWLFEEVLPELRKSGIYSIK----DQQC 136
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ V+ K L + A ++ QL LK++ T I D + +I +S +EY
Sbjct: 137 SKDVVNYDKKLAD----AQMETLQLKLKLSEANTTIAKYDA-KVAEINQQHASQINEYCL 191
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
+R Q A F K LQ+ +
Sbjct: 192 ANVEMKRNYEHQMAEF-KDREYKMQLQMKDM 221
>gi|329890516|ref|ZP_08268859.1| BRO family, N-terminal domain protein [Brevundimonas diminuta ATCC
11568]
gi|328845817|gb|EGF95381.1| BRO family, N-terminal domain protein [Brevundimonas diminuta ATCC
11568]
Length = 182
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 1 MSTITPFEFESN-----KIRTIVDKDQNIWFVAKDVATALGY-----ENSNEAINAHCKG 50
M+ F F + IRT+ D WFVA DV L N + + A K
Sbjct: 11 MTDTIAFAFVRHGEDPVNIRTVQ-IDGEPWFVAVDVCRCLSLGVNNVTNHTDRLEAAEKR 69
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R L G + ++SE +Y+L+++S A F+ W+ EVLP++RKTG Y++
Sbjct: 70 HVARSTLNPGKGGSPMIVVSESGLYKLIMRSDKQEALVFQHWIASEVLPSIRKTGKYAL- 128
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
A + + + E + L++ L +
Sbjct: 129 -----ADHGREAMPLPMDIAEAESTSLLRERPTLPSLRE 162
>gi|320540203|ref|ZP_08039858.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
gi|320029869|gb|EFW11893.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
Length = 254
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 7 FEFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----RYPLKTE 60
F ES I + F A +VA ALGYE +A+ HCK + K L E
Sbjct: 12 FRNESLNIEISGMLYEGKPVFFAVEVAKALGYERPQDALAKHCKSLIKINFGEMPKLGLE 71
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V +++EPD+YRL+++S LPSA+K + WV EEVLP++R+TG Y + + S S
Sbjct: 72 PKPTGVILLTEPDLYRLILRSKLPSAEKVQDWVCEEVLPSIRQTGGYQLP-KQPVPQSLS 130
Query: 121 TVLRVHKHLEELAKQA 136
LR+ L E +A
Sbjct: 131 EALRLAADLAEQRDEA 146
>gi|329295791|ref|ZP_08253127.1| phage anti-repressor protein [Plautia stali symbiont]
Length = 263
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-----GGIQKVRIISEPDVYR 76
F A ++A ALGY + ++A+N HCK + K ++TE + + + E DVYR
Sbjct: 28 GKPVFFAVELAKALGYNDPHQALNKHCKSLIKLDSVETEEMGLGFKPKGIILTPESDVYR 87
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS---ASTVLRVHKHLEELA 133
L+++S LPSA++ + WV EEVLPTLR+ GSYS++ S R + E+A
Sbjct: 88 LILRSKLPSAERVQDWVCEEVLPTLRQQGSYSMKTAHRDEGSGLPEYRKARAMQIQMEIA 147
Query: 134 KQAGLKDNQLLLKVNRGVTKITG-VDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRA 192
++ L L + V I G ++ + ++ +P + + T TQI + N A
Sbjct: 148 EKTFLWATGLSDAARQAV--IAGLINPIAGHEVIPVPVLEEK-HYTATQISKMFNV--SA 202
Query: 193 RFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMC 227
+ ++ ++ Y + + +
Sbjct: 203 NKIGRIANDNNMKTDSYGEYYLDKSRYSTKQVESF 237
>gi|7672865|gb|AAF66674.1|AF143953_2 bro-a [Spodoptera litura NPV]
Length = 322
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 1 MS--TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS I F+F ++ +R ++++DQ + FVAKDVA +L Y+++ AI H K
Sbjct: 1 MSRVKIGEFKFGEDTFSLRYVLERDQPLKFVAKDVAASLKYQDAKRAIKIHVDD--KYRS 58
Query: 57 LKTEGG-------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
GG +I++ V +L++KS LP A + + W+ EEV
Sbjct: 59 TFEHGGQIAPLVSNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEV 118
Query: 98 LPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+P + TG Y+ + + ++K L ++ + +++ N VT TG+
Sbjct: 119 IPQVLCTGKYA--PAVEMDANYGAIEELNKKLTFASESLAKANEKIIHFANALVTANTGL 176
Query: 158 DQLEAMDIKHLPSSDNDEYLTIT 180
Q AM + +N T
Sbjct: 177 VQANAMLNEARKDCENARRETAQ 199
>gi|114680084|ref|YP_758497.1| baculovirus repeated ORF-a [Plutella xylostella multiple
nucleopolyhedrovirus]
gi|91982148|gb|ABE68416.1| baculovirus repeated ORF-a [Plutella xylostella multiple
nucleopolyhedrovirus]
Length = 322
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 1 MS--TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS I F+F ++ +R ++++DQ + FVAKDVA +L Y+++ AI H K
Sbjct: 1 MSRVKIGEFKFGEDTFSLRYVLERDQPLKFVAKDVAASLKYQDAKRAIKIHVDD--KYRS 58
Query: 57 LKTEGG-------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
GG +I++ V +L++KS LP A + + W+ EEV
Sbjct: 59 TFEHGGQIAPLVSNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEV 118
Query: 98 LPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+P + TG Y+ + + ++K L ++ + +++ N VT TG+
Sbjct: 119 IPQVLCTGKYA--PAVEMDANYGAIEELNKKLTFASESLAKANEKIIHFANALVTANTGL 176
Query: 158 DQLEAMDIKHLPSSDNDEYLTIT 180
Q AM + +N T
Sbjct: 177 VQANAMLNEARKDCENARRETAQ 199
>gi|62181158|ref|YP_217575.1| hypothetical protein SC2588 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128791|gb|AAX66494.1| hypothetical protein SCH_2588 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715647|gb|EFZ07218.1| hypothetical protein SCA50_2768 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 261
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 2 STITPFEFESNKIRTIVDK----DQNIWFVAKDVATALGYENSNEAINAHCKGVAK---- 53
S I FEF+S++ + F+A +A ALGY N +A+ HCK + K
Sbjct: 3 SIIKHFEFKSSEGMAVSIDAARFKGKPVFLAVPLAKALGYTNPADALKKHCKSLIKLNYS 62
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L + ++++ + DV+RL+++S+LPSA++ + WV EEVLP L TG+YS+
Sbjct: 63 ESRELGFGDNPRGIQLVGQADVFRLIMRSSLPSAERVQDWVCEEVLPALMDTGTYSIRKE 122
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG-------VDQLEAMDI 165
K + L + L+ LA + + + L+ + + ++ ++ + D
Sbjct: 123 KTSSGLPEYRLAKAEQLKALALEKNIASARELMVMLPRLDPMSHQTLAASLINPIIGYDA 182
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
LP + Y T + GE++ A + ++ L+ + + +
Sbjct: 183 IPLP-VIEEHYYTAAEAGEKIGV--SANKIGRIANANNLKTEQYGKFFLDKSAHSSKQ-- 237
Query: 226 MCDVPMQHVEG 236
+ + EG
Sbjct: 238 -VEAFRYNAEG 247
>gi|37651371|ref|NP_932668.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499280|gb|AAQ91679.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 320
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RY 55
M+ + F+F ++ +R ++++DQ + FVAKDVA +LGYE S A+N H K Y
Sbjct: 1 MTQVKIGQFKFGEDTFTLRYVLERDQQVKFVAKDVANSLGYEKSRNAVNQHVDDKYKFTY 60
Query: 56 PLKTEGG----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
E G +I++ V +L++KS LP A + + W+FEEV+P
Sbjct: 61 EQAPENGALAANSAVKQGDPLYLHPSTVLITKEGVIQLIMKSKLPYAVELQAWLFEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSAST-VLRVHKHLEELAK--QAGLKDNQLLLKVNRGVTKITG 156
+ TG Y+ + ST +++ + L E+A+ A + N L+ N + T
Sbjct: 121 QVLCTGKYAPAIKMETDETLSTALIKSNTDLAEIARGLMAANERNNALVTQNNALMAQTQ 180
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQ 181
V + + I Q
Sbjct: 181 VLTQALIAATERSDKLANRMADIVQ 205
>gi|310826506|ref|YP_003958863.1| prophage antirepressor [Eubacterium limosum KIST612]
gi|308738240|gb|ADO35900.1| prophage antirepressor [Eubacterium limosum KIST612]
Length = 287
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 103/265 (38%), Gaps = 43/265 (16%)
Query: 10 ESNKIRTIVD--KDQN----IWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEG 61
E ++RT+V +DQ ++FVAKDV A+ Y+N +A+ H + V R + G
Sbjct: 23 EFARVRTLVSPGEDQELSPTVYFVAKDVCDAMDYQNHRQAVKRHVEPEDVLSRGVIDKYG 82
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA--TSA 119
++ +I+E ++ L++ S A++F +V +LP + G+Y ++ +L A
Sbjct: 83 RRRRTLVINESGLFALILASRQDKARRFRHYVTSVILPAILHYGAY-IDPGQLEALKKDP 141
Query: 120 STVLRVHKHLEELAKQAGLKD---NQLLLKVNRGVTKITGVDQLEAMDI----------- 165
+ + ++LE + ++ + + N+ R + ++ +
Sbjct: 142 RGIEILAQNLERMFRRCDVMEYQKNKAQADYQRILPDALFSQTIQVSEDCISVGAMAKLV 201
Query: 166 ----------KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
L + ++ + P Q+A L L+L+ V G +
Sbjct: 202 FQGHKKSLGQNRLYAWLREQGYLCRRPCFWNQPTQKAMELGVLVLRENS-VRDRHGRWHL 260
Query: 216 TPKG-------EERGGKMCDVPMQH 233
K ++C ++
Sbjct: 261 YQKPMVTPKGQRYFAERLCPADREN 285
>gi|86137843|ref|ZP_01056419.1| hypothetical protein MED193_08273 [Roseobacter sp. MED193]
gi|85825435|gb|EAQ45634.1| hypothetical protein MED193_08273 [Roseobacter sp. MED193]
Length = 150
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-- 60
++ ++F +R +V D WFVA D LG +N + K +T
Sbjct: 29 EVSTYDFNGLSLR-VVQIDGEPWFVAIDALKTLGISRHGGVLNPLNEDE-KTMRGRTSLG 86
Query: 61 -GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT-----LRKTGSYSVEAPKL 114
G + + +ISE +Y+L+ +S P A+ F+ WV +VLP+ +RKTGSYS+ L
Sbjct: 87 LGHGRPINLISESGLYKLITRSDKPEAKPFQEWVTRDVLPSVRLTTIRKTGSYSLTDSAL 146
Query: 115 RATS 118
S
Sbjct: 147 SMAS 150
>gi|46205473|ref|ZP_00048502.2| COG3617: Prophage antirepressor [Magnetospirillum magnetotacticum
MS-1]
Length = 163
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 16/148 (10%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ ITPF+FE +R +V D FVA D+A +LGY ++ + + + +
Sbjct: 17 MTASITPFDFEGTPVR-VVSVDGEPCFVAADLARSLGYRDAVNLVRILDEDEVTTHIVS- 74
Query: 60 EGGIQKVRIISEPDVYRLLVKST---------LPSAQKFERWVFEEVLPTLRKTGSYSV- 109
+++ +++EP +Y + + +F+RWV +V+P++RKTG+YSV
Sbjct: 75 ---GREIMLVTEPGLYHAITARRQVKSLGAQVMERIARFKRWVHHDVIPSIRKTGAYSVR 131
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAG 137
+AP + + + E +AG
Sbjct: 132 QAPAFDPEDPAALRVMLLGYTEKLIEAG 159
>gi|9627744|ref|NP_054031.1| baculovirus repeated ORF [Autographa californica
nucleopolyhedrovirus]
gi|1175048|sp|P24655|Y002_NPVAC RecName: Full=Uncharacterized Bro-N domain-containing protein ORF2
gi|559071|gb|AAA66632.1| baculovirus repeated ORF [Autographa californica
nucleopolyhedrovirus]
Length = 328
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 38/255 (14%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT-- 59
I F+F ++ +R ++++DQ + FVAKDVA +L Y ++AI H K +T
Sbjct: 6 IGEFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSLFEQTIQ 65
Query: 60 EGGI---------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
GG +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 NGGPTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y P ++ + V K + + + K V K ++++ A+
Sbjct: 126 GKYD---PAIKQREEESKQLVTKLIATFTEHTNALQAVVAQKTEELVKKQEFIERIVAIK 182
Query: 165 IKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVS-------KVSGG 212
K + + D L +T++ LN + + ++++ K+ QV+ +S
Sbjct: 183 DKQIEAKD----LQVTRVMTDLNRMYTGFQETMQKKDEIMQKKDAQVTDLVAKVVDLSDR 238
Query: 213 YRPTPKGEERGGKMC 227
P + + +C
Sbjct: 239 AVQYPADKRKHPVLC 253
>gi|29567169|ref|NP_818731.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467945|dbj|BAC67335.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 337
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 38/255 (14%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R +++++Q + FVAKDVA AL Y + ++ + K +T
Sbjct: 6 IGEFKFGEDTFALRYVLEQNQQVKFVAKDVAAALKYVDCDQTVRKIVDSKYKTTYGQTPR 65
Query: 62 G-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 DDGAASKSVAKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y P ++ V K + A ++ K + K ++++ A+
Sbjct: 126 GKYD---PAIKQREEENKQLVTKLIATFTDHANALQAVVVQKTKELMDKQEFIERIVAVK 182
Query: 165 IKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVS-------KVSGG 212
K L + D L +T++ LN + + ++LL + QVS +SG
Sbjct: 183 DKQLEAKD----LQVTRVMTDLNRMYTGFQETMQKKDELLQVKDAQVSDLVAKVIDLSGR 238
Query: 213 YRPTPKGEERGGKMC 227
P E + +C
Sbjct: 239 AVQYPADERKHPVLC 253
>gi|227486476|ref|ZP_03916792.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
gi|227235524|gb|EEI85539.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 72/188 (38%), Gaps = 23/188 (12%)
Query: 37 YENSNEAINAHCKGVAK-RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
Y N +AI H K T GGIQ + II+E +Y L++ S LP A+ F+ WV
Sbjct: 1 YVNPRKAIYDHVDEEDKGVTKWNTPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTR 60
Query: 96 EVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
EVLP++RK G Y K K EEL A L N+++ K
Sbjct: 61 EVLPSIRKNGGYIAGQEK-------------KTNEELLADAILVANRIIAKREEE----- 102
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
++ L + D + + L PQ L+ +GL P
Sbjct: 103 -IEVLRPKADYYDKLVDYNLLTNFRNTAKELGIPQ--NQFISFLMDKGLIYRDKKKKLLP 159
Query: 216 TPKGEERG 223
+ +G
Sbjct: 160 Y-ADKNKG 166
>gi|71906436|ref|YP_284023.1| BRO, N-terminal [Dechloromonas aromatica RCB]
gi|71846057|gb|AAZ45553.1| BRO, N-terminal [Dechloromonas aromatica RCB]
Length = 111
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 17 IVDKDQNIWFVAKDVATALGY----EN----SNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
+V D WFVA+D+ AL N + + + T G QKV +
Sbjct: 1 MVTIDDQPWFVARDICEALELGWDKSNNVYAPSRLVKPLHDDEKASKQIATSG--QKVIL 58
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+SE +Y+L+++S P A+ F+ WV +EVLP++RKTGS+ P L
Sbjct: 59 VSESGLYKLIMRSDKPQAKAFQDWVTKEVLPSIRKTGSFVTGHPSL 104
>gi|222530434|ref|YP_002574316.1| prophage antirepressor [Caldicellulosiruptor bescii DSM 6725]
gi|222457281|gb|ACM61543.1| prophage antirepressor [Caldicellulosiruptor bescii DSM 6725]
Length = 261
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 48/263 (18%)
Query: 2 STITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-------------INAH 47
+ ++ F E K+R IV D + F DV +LGY N+ I +
Sbjct: 4 NQLSIFENHEFGKLRVIVKDDGTVLFNLHDVGWSLGYTVKNDRGQLFLRKNKLIDIIQSL 63
Query: 48 CKGV----AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
V + L T +++ I+E +Y L+++S A+KF +WV +EVLP++RK
Sbjct: 64 EIPVVSLSDTKVELTTALDFEQL-YITEDGLYDLILESRASGARKFRKWVTQEVLPSIRK 122
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG Y+ + L A VL +K ++E + K+ K D+L
Sbjct: 123 TGVYAKDPKHLLAL---AVLEANKIIQEQEQ-----------KIKELEPKAEYYDKL--- 165
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
D + + LN P+R + +N LL K+ + G RP + +E
Sbjct: 166 -------VDRNLLTNFRDTAKELNIPER-KLINLLLQKK-ILYRDAKGNLRPYAEYKEYF 216
Query: 224 GKMCDVPMQHVEGSTQQLKWNSN 246
+ Q N
Sbjct: 217 ELKE---WTKNGTAGVQTLVNPK 236
>gi|126652777|ref|ZP_01724929.1| putative antirepressor [Bacillus sp. B14905]
gi|126590466|gb|EAZ84585.1| putative antirepressor [Bacillus sp. B14905]
Length = 271
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 37/257 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
M+ + F + ++ D +F A DVA +L Y+ A+ HC Y + T
Sbjct: 3 MNELKTFNHQMFGELPLIIVDGKEYFGATDVAKSLEYKQPEHAVKNHCDSEGCISYTVPT 62
Query: 60 EGGIQKVRIISEPDVYRLLV----KSTLPS----AQKFERWVFEEVLPTLRKTGSYSVEA 111
+GG Q+ I+ +V RL+V +S P A+ +E+W+F+EV+P++ K G Y
Sbjct: 63 DGGKQQKNFITLGNVSRLIVAASKQSKNPEIQQKAKVYEKWIFDEVIPSVHKQGGYIATT 122
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD----IKH 167
+ + KQ + + Q +++V R K+ D +E + +K
Sbjct: 123 DDDDDETIMAKALILAQKTIKKKQYEILEQQRIIEVQR--PKVVYADAVEVSEDTVLVKD 180
Query: 168 LPSSDNDEYLTI----------------TQIGERLN-PPQRARFLNKLLLKRGLQV---- 206
L + + + I Q GE N P QR+ L +++K GL+
Sbjct: 181 LATVLRQKGVNIGEVRLFKWLRENGYLCKQKGEMWNMPTQRSLELGVIVVKHGLRTGSNG 240
Query: 207 -SKVSGGYRPTPKGEER 222
K + + T KG+
Sbjct: 241 EMKKTRTPKITGKGQVY 257
>gi|57505941|ref|ZP_00371865.1| putative antirepressor [Campylobacter upsaliensis RM3195]
gi|57015741|gb|EAL52531.1| putative antirepressor [Campylobacter upsaliensis RM3195]
Length = 281
Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKRYPL 57
+ F+ E K+R I ++ F KD+ +L +N+ + NA K P
Sbjct: 15 NNFQIFQREEKKLRIIKNESGEPLFCLKDICDSLEIQNNADIKNAILKEFEAPRLNLAPF 74
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+T+G IQ +I+EP +Y +L++S P A++F +WV EVLP++RK +Y +L
Sbjct: 75 QTQGEIQHFTMITEPQLYFMLMRSDKPKAREFRQWVINEVLPSIRKNRAY-----RLEFG 129
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQL-----LLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
R+ K L+++ K + LKD + L+K + K ++ + +
Sbjct: 130 LNDKAFRLEKELDKMKKVSKLKDELIEAKNNLIKTQEKLIKTAKKNKFLKKEYSKEKEEN 189
Query: 173 NDEYLT--ITQIGERLNPPQRARFLNKL 198
T +G RL ++A L ++
Sbjct: 190 QAWNRTQAALAVGARLASVRKAENLKQI 217
>gi|37651366|ref|NP_932615.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499275|gb|AAQ91674.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 336
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 33/256 (12%)
Query: 1 MSTITP--FEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ I F+F +R ++D+D + FVAKDVA++L Y ++AI H K
Sbjct: 1 MAQIKIGQFKFGEDVFTLRYVLDRD-IVKFVAKDVASSLKYNICDKAIRTHVDDKYKTSF 59
Query: 57 LKT--EGG---------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+T GG +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 60 EQTIQLGGSTSTNLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIP 119
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y+ P ++ ++K ++ + LL K V K +++
Sbjct: 120 QVLCTGKYN---PAIKQQQEENKQLINKLVKTFSDHTNTLQTALLQKTQELVKKQEFIER 176
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNK-LLLKRGLQVS-------KVSG 211
+ A K + + D +T + N Q ++ ++ QV+ +SG
Sbjct: 177 IVATKDKQIEAKDLQVTRVMTDLNRMYNGFQETMQKKDEIMQQKDAQVTDLVAKVIDLSG 236
Query: 212 GYRPTPKGEERGGKMC 227
P+ E + +C
Sbjct: 237 RAVQYPEDERKHPVLC 252
>gi|222778500|ref|YP_002576137.1| putative antirepressor, BRO family [Campylobacter lari RM2100]
gi|222539785|gb|ACM64885.1| putative antirepressor, BRO family [Campylobacter lari RM2100]
Length = 183
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 1 MSTITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKRY 55
MS++ FE + K+RTI DK+ F KD+ L +NS + N + R
Sbjct: 1 MSSVILFENKELGKVRTIRDKNNEPLFCLKDICDILEIQNSRDVRNTILREFELRRLNRR 60
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKL 114
T GI++ +I EP +Y +L++S P A+ F +WV +EVLP++RK G Y+ APKL
Sbjct: 61 SFDTGFGIKEFTMIDEPQLYFVLMRSDKPKAKPFRQWVIKEVLPSIRKQGYYAFNNAPKL 120
Query: 115 RA-------TSASTVLRVHKHLEELAKQAGLK 139
++ ++E+ ++ K
Sbjct: 121 ENYNNKYDLPDTPYKEKIANAIKEIEQKQNSK 152
>gi|209170967|ref|YP_002268113.1| BRO-C [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436558|gb|ACI28785.1| BRO-C [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 346
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 40/259 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIV-DKDQNIWFVAKDVATALGYENSNEAINAHC----KGV 51
M+ + F+F E ++R +V D D+ + FV +D+A L YE +AI H K V
Sbjct: 1 MAQVKIGAFKFGEEKFELRYVVNDNDKQVLFVGRDIAIVLKYEKPADAIAKHVDAKYKCV 60
Query: 52 AKRYPLKTE----------GG------------IQKVRIISEPDVYRLLVKSTLPSAQKF 89
A+ L+ + GG +I++ V +L++KS LP A +
Sbjct: 61 AESMGLQNKDPSFGENQGVGGEVTIKKGSPLYLQPHTILITKSGVIQLIMKSKLPYAVEL 120
Query: 90 ERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
+ W+ EEV+P + TG Y+ LR++K + + ++ + QL ++ +
Sbjct: 121 QEWLLEEVIPQVLCTGKYTPAIDNGDDGDEKQALRLYKDFQAVVQKKDEQLQQLTARIQK 180
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
+ V D+ + S ++ Q+ +++LL K + +
Sbjct: 181 MAEQKDQVIHRIMNDLNRMYSGFQSTMAKKDELMR-----QKDEQVSRLLDK----MVDM 231
Query: 210 SGGYRPTPKGEERGGKMCD 228
SG P +++ +C
Sbjct: 232 SGRVVQYPANDKKLPMICI 250
>gi|209978856|ref|YP_002300599.1| BRO B I [Adoxophyes orana nucleopolyhedrovirus]
gi|192758838|gb|ACF05373.1| BRO B I [Adoxophyes orana nucleopolyhedrovirus]
Length = 344
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 45/262 (17%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R +++++Q + FVAKDVA AL Y + ++ + K +T
Sbjct: 6 IGEFKFGDDTFTLRYVLEQNQQVKFVAKDVAAALKYVDCDQTVRKIVDSKYKTTYAQTPR 65
Query: 62 G-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 DDGAASKSVAKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y P ++ V K + A + K V K ++++ A+
Sbjct: 126 GKYD---PAIKQREEENKQLVTKLIATFTDHANALQAVVAQKTEELVKKQEFIERIIAIK 182
Query: 165 IKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVS----- 207
K + + D L +T++ LN ++ ++K LL + QVS
Sbjct: 183 DKQIEAKD----LQVTRVMTDLNRMYTGFQDTMQKKDEIMHKKDLLLQVKDAQVSDLVAK 238
Query: 208 --KVSGGYRPTPKGEERGGKMC 227
+SG P E + +C
Sbjct: 239 VIDLSGRAVQYPADERKHPVLC 260
>gi|330719224|ref|ZP_08313824.1| putative antirepressor - phage associated protein [Leuconostoc
fallax KCTC 3537]
Length = 160
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----KGVAKRYPLKTE---G 61
F+ +R ++ +++ W VA+DV A+GY NS +AI H KGV K L G
Sbjct: 13 FDDVPVRAVLLQNKT-WLVARDVTKAMGYSNSRQAIKNHVSKLDKGVTKIDTLTNGSVGG 71
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT---- 117
G+Q+ II+E L++ S P A+KF+R++ EV+P + +TG Y ++ + +
Sbjct: 72 GLQEATIINESGFNALILHSKKPKAKKFQRFITSEVIPQILRTGKYVPKSKQATNSYPKF 131
Query: 118 -SASTVLRVHKHLEELAKQAGLKDNQLLL 145
+A T ++ + ++ + ++ Q +
Sbjct: 132 NTADTTPKLIEQIKYFEEFKAFQEAQGWV 160
>gi|86355576|ref|YP_473244.1| BRO-b [Hyphantria cunea nucleopolyhedrovirus]
gi|86198181|dbj|BAE72345.1| BRO-b [Hyphantria cunea nucleopolyhedrovirus]
Length = 323
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F ++ +R ++ +Q + FVAKD+A++L Y N +A++ H K
Sbjct: 1 MSQVKIGQFKFGQDAFTLRYVLGGEQPVKFVAKDIASSLKYGNCKDAVSKHVDKKYKYTY 60
Query: 57 LKTEGG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ ++++ V +L++KS LP A + + W+ EEV+
Sbjct: 61 SEPGARIAPLASDSVARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVI 120
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
P + +TG Y+ T+ + ++K L ++ + +++ N VT TG+
Sbjct: 121 PQVLRTGKYA--PAVKMDTNYGVIEELNKKLTFASESLAEANEKIIHFANALVTANTGLV 178
Query: 159 QLEAMDIKHLPSSDNDEYLTIT 180
Q AM + +N T
Sbjct: 179 QANAMLNEARKDCENARRETAQ 200
>gi|312792906|ref|YP_004025829.1| phage antirepressor protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312878147|ref|ZP_07738078.1| phage antirepressor protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311795071|gb|EFR11469.1| phage antirepressor protein [Caldicellulosiruptor lactoaceticus 6A]
gi|312180046|gb|ADQ40216.1| phage antirepressor protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 260
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 45/261 (17%)
Query: 2 STITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENS--------NEAINAHCKGVA 52
+ ++ FE E K+R IV + I+F +DVA L Y + I CK +
Sbjct: 4 NQLSIFENPEFGKLRVIVKDNGTIFFNLQDVAWGLKYVKKAKERLYLRKDRIANICKSLG 63
Query: 53 KRYPLKTEGGIQ-------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+++ I+ + I E +Y L +S A+KF +WV +EVLPT+R+TG
Sbjct: 64 ITVVVQSGQPIEIAPDLDFEQLYIPEDGLYELAFESHASGARKFRKWVTQEVLPTIRQTG 123
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+Y + KL A VL +K ++E + K+ K D+L
Sbjct: 124 AYIKDTKKLLAL---AVLEANKIIQEHEQ-----------KIKELQPKAEYYDKL----- 164
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGK 225
D + + LN P+R + +N LL K+ + G RP + +E
Sbjct: 165 -----VDRNLLTNFRDTAKELNIPER-KLINLLLQKK-ILYRDAKGNLRPYAEYKEYFEL 217
Query: 226 MCDVPMQHVEGSTQQLKWNSN 246
+ Q N
Sbjct: 218 KE---WTKNGAAGVQTLVNPK 235
>gi|148368936|ref|YP_001257066.1| bro-6 [Spodoptera litura granulovirus]
gi|147883449|gb|ABQ52058.1| bro-6 [Spodoptera litura granulovirus]
Length = 485
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 29/221 (13%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--------GVAKRYPLKTEGG- 62
++ + + + +A LGY+N+ +AI H K VA R T
Sbjct: 15 GEVYIVEVEKDKFMYGGHGIAEFLGYKNTRDAIQKHVKPQWKTTWESVANRDSFVTSSQP 74
Query: 63 -------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
ISE VY L+++S LP+A++F+RW+FEEVLP LRKTG Y+++ +
Sbjct: 75 VNLPVNWHPHTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRKTGKYNIQ--DQQ 132
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP------ 169
A+S + ++ ++ + L ++ K + V ++ + + I L
Sbjct: 133 ASSGTDIIANVAEMKIKLLEQRLDHQSVVAKYDAQVAQLNQIIAMNETTISELRRNYEQQ 192
Query: 170 -----SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
D L + + N +N +L + +Q
Sbjct: 193 ISEFKERDYKAQLRMKDLANAANMTMTQFAVNAMLARDNIQ 233
>gi|238898668|ref|YP_002924349.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|238899089|ref|YP_002924771.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466427|gb|ACQ68201.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466849|gb|ACQ68623.1| phage anti-repressor protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 263
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAK---RYPLKTEGGIQKVRII--SEPDVYR 76
F A ++A ALGY+N +EA+ +CK + K L+ G + II E D+YR
Sbjct: 28 GKPVFFAVELAKALGYKNPHEALQDNCKLLIKLNSSQTLELNLGFKPKGIILAPESDLYR 87
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLE---ELA 133
L++KS LPSA++ + WV EEVLPTLR+ GSYS+ A S R + ++ E+A
Sbjct: 88 LILKSKLPSAERVQDWVCEEVLPTLRQQGSYSMNKTHRDAGSGLPEFRKARAMQIQMEIA 147
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRAR 193
++ L + R ++ + ++ LP +++ + TQ+G+ + A
Sbjct: 148 EKTFQWATG-LSDIARQAVIAGLINPIAGHEVIPLP-VIEEQHYSATQVGKIFHV--SAN 203
Query: 194 FLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMC 227
+ ++ ++ + Y T + + +
Sbjct: 204 KIGRIANDNHMKTDEYGEYYLDTSRHSSKQVESF 237
>gi|282904500|ref|ZP_06312385.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus C160]
gi|282595056|gb|EFC00023.1| toxin-antitoxin system, toxin component, Bro family [Staphylococcus
aureus subsp. aureus C160]
Length = 254
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 28/251 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ I F + I I ++N F + VA +LG+ +N + I + + K
Sbjct: 1 MNEIKTFSNDMFSIL-IKQDNENNLFDLETVAKSLGFTQFKNGKQYIR--WETINKYLGK 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ + +
Sbjct: 58 YLSQEVGKGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATDNVIEQTL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 KDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGT 163
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
L TQI A+ LNKLL + LQ KV+ + + + + +P+ +
Sbjct: 164 LATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIPIVRSD 220
Query: 236 GSTQ---QLKW 243
G Q +W
Sbjct: 221 GREDTVLQTRW 231
>gi|229004103|ref|ZP_04161904.1| BRO [Bacillus mycoides Rock1-4]
gi|228756964|gb|EEM06208.1| BRO [Bacillus mycoides Rock1-4]
Length = 272
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGI 63
F +++ D WF A + A L Y N +A+ HC +G+ R L TEGG
Sbjct: 114 VFNNSEFGELEVLEIDGKPWFPAIECAEILIYTNPRKAMRDHCLSEGITNRSVL-TEGGN 172
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
Q+ + I+E ++YRL++KS LPSAQ FERWVF+EVL +LR+ Y VE ++
Sbjct: 173 QEKKYINEDNLYRLIIKSKLPSAQSFERWVFDEVLLSLRQNKGYVVETSEIEFIEKH-FT 231
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+ +L+ + ++N+ L + + I V Q +A
Sbjct: 232 GLSDNLKRMMVMELNENNKKLHEEIKQKNNIISVLQPKA 270
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 12 NKIRTIVDKDQNIWFVAKDV-ATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
IRT + + FVAKD+ +GY+N +A+ ++ GG + V + S
Sbjct: 10 GNIRTY-EINGVKRFVAKDILTDIIGYKNITDALKKVNNKEINT--IQMPGGFKIVVLTS 66
Query: 71 EPDVYRLLV--KSTLPSAQKFERW 92
E + + KS + + W
Sbjct: 67 E-GLKQFFNDTKSKKEKFKTMKEW 89
>gi|294675000|ref|YP_003575616.1| BRO domain-containing protein [Prevotella ruminicola 23]
gi|294473360|gb|ADE82749.1| BRO domain protein [Prevotella ruminicola 23]
Length = 126
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ---KVRIISEPDVYRLLV 79
+FV KDVA ALG AI+ H K L G KV II+E +Y L++
Sbjct: 40 ETFFVGKDVALALGDSKPENAISTHVDIEDKTTTLIQGTGSNYKSKVVIINESGLYSLIL 99
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGS 106
S LP A+ F+RWV EVLP +R+TG
Sbjct: 100 SSKLPQAKAFKRWVTSEVLPQIRQTGG 126
>gi|285002341|ref|YP_003422405.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343601|gb|ACH69416.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 496
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--------GVAKRYPLKTE-- 60
S +I + + + VA LGY+N+ +AI+ H K VA R PL T
Sbjct: 14 SAEIWIVELEKDKFMYGGHGVAEFLGYKNTRDAIHKHVKPQWKATWETVANRDPLVTSLA 73
Query: 61 ------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
ISE VY L+++S LP+A++F+RW+FEEVLP LR++G YS++ +
Sbjct: 74 QAEIPVNWQPNTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRRSGKYSIQDNQQ 133
Query: 115 RATSASTVLRVHKHLEE-------LAKQAGLKDNQLLLKVNRGVTKITGVDQ------LE 161
+ + + +K+L+E LA N+L++ TK+ V+Q +E
Sbjct: 134 KQQDCNMLNWANKYLQEIIPLQNQLATIRADHRNELVMCRAEFETKLRDVEQCYERQIME 193
Query: 162 AMDIKHLPSSDNDEYLTITQIGERL-NPPQRARFLNKLLLKRGLQ 205
+H +Y T + +R N +N LL K ++
Sbjct: 194 YKGREHEFLLREVKYKTAIEELKRTSNMTLMEFGVNALLAKDNIE 238
>gi|86355664|ref|YP_473332.1| BRO-e [Hyphantria cunea nucleopolyhedrovirus]
gi|86198269|dbj|BAE72433.1| BRO-e [Hyphantria cunea nucleopolyhedrovirus]
Length = 343
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 46/267 (17%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
MS + F+F ++ +R +++++Q + FVAKDVATAL YEN+ E++ H +Y
Sbjct: 1 MSQVKIGQFKFGEDTFTLRYVLERNQQQVKFVAKDVATALKYENTTESVRKHVD---VKY 57
Query: 56 PLKTEGGIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
E G Q +I++ V +L++KS LP A + + W+ E
Sbjct: 58 KTTFEQGEQFTLPAFNSVAKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLE 117
Query: 96 EVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
EV+P + TG Y P ++ V K + A + K V K
Sbjct: 118 EVIPQVLCTGKYD---PAIKQREEENKQLVTKLIATFTDNAKALQAVVAQKTEELVKKQE 174
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRG---LQVS----- 207
++++ A+ K + D +T + Q ++++ LQV
Sbjct: 175 FIERIIAIKDKQIEVKDLQVTRVMTDLNRMYTGFQETMQRKDEMMQKKDELLQVKDAQVT 234
Query: 208 -------KVSGGYRPTPKGEERGGKMC 227
+SG P E + +C
Sbjct: 235 ELVAKMVDLSGRAVQYPADERKHPVLC 261
>gi|270692618|ref|ZP_06222930.1| BRO family protein [Haemophilus influenzae HK1212]
gi|270316045|gb|EFA28074.1| BRO family protein [Haemophilus influenzae HK1212]
Length = 184
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 35 LGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
LGY N +AI+ HCK GVAKRY + G ++ I+EP++YRL++KS P A+ FE W
Sbjct: 1 LGYANPRDAISKHCKVAGVAKRY-ISYPSGKKEATFINEPNLYRLIIKSRKPEAEPFEAW 59
Query: 93 VFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLK 139
VFEEVLP +RKTG Y ++ +L EL + L
Sbjct: 60 VFEEVLPQIRKTGKYQLQPQQLALPEPQKFTFAFTEY-ELQQLIWLW 105
>gi|114679899|ref|YP_758349.1| bro-c [Leucania separata nuclear polyhedrosis virus]
gi|39598630|gb|AAR28816.1| bro-c [Leucania separata nuclear polyhedrosis virus]
Length = 485
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 59/238 (24%), Positives = 91/238 (38%), Gaps = 29/238 (12%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK------------------- 58
V+KD + VA LGY+N+ +AI H K K
Sbjct: 22 VEKD-KFMYGGHGVAQCLGYKNTRDAIQKHVKNQWKTTWENLMAVAIGDPLMKSSQLINV 80
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
I+E VY L+V+S LP+A+KF+ W+FEEVLP LR+TG Y + + +T
Sbjct: 81 PPNWQPNTVFITEAGVYALIVRSKLPAAEKFQEWLFEEVLPELRRTGKYDLRNKQPASTD 140
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
V+ K L E A+ +K L + N + K + +H S +
Sbjct: 141 ---VVNYDKKLAE-AQMETMKLKLELSEANNMMAKYDTTISEMKRNYEHQMSEYKEREYK 196
Query: 179 ITQIGERL----NPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ 232
+ + L N +N LL K ++ T +M + P +
Sbjct: 197 MQLQMKDLTNAANMTMAQFAVNALLAKDNIE-ENERMRQTLTNVSGRVVPEMTEQPHK 253
>gi|215401542|ref|YP_002332770.1| BRO-1 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484083|gb|ACI47516.1| BRO-1 [Spodoptera litura nucleopolyhedrovirus II]
Length = 369
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 34/260 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
MS + F F E ++R I++ D ++FVAKD+AT L YEN+ +A+ H K
Sbjct: 1 MSIVKVGFFAFGGEEFELRYIINNHDMQVYFVAKDIATLLKYENTKKAVTDHVDEKYKMV 60
Query: 56 PLKTEGG-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +I++ V +L++KS L A + + W+ E+V+
Sbjct: 61 YSDDSQPESVIVNNLLVHSNILYLHPQTVLINKSGVIQLIMKSKLSYAVELQEWLLEDVI 120
Query: 99 PTLRKTGSYSVEAPKLRAT--SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
P + TG YS A T + + ++ +++ Q KD+ + + +I
Sbjct: 121 PQVLCTGKYSASAALTTGTARDGDSGIVGNEIVKQFQTQIQKKDDHI----QNLIVQINR 176
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQVSKVSGGYR 214
+ +K L ++ N+ Y + + + N Q+ + +NKLL K V+
Sbjct: 177 LTDNNNTMVKKLMNNVNEMYGRLHETVSKSNEIMLQKDKQINKLLDKL----DDVAERAV 232
Query: 215 PTPKGEERGGKMCDVPMQHV 234
P +++ +C +
Sbjct: 233 KYPADDKKVPMICIGRKDNN 252
>gi|148368932|ref|YP_001257062.1| bro-4 [Spodoptera litura granulovirus]
gi|147883445|gb|ABQ52054.1| bro-4 [Spodoptera litura granulovirus]
Length = 471
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 38/213 (17%)
Query: 22 QNIWFV----------AKDVATALGYENSNEAINAHCKGVAK-----------RYPLKTE 60
+W V +A LGY+ ++AI H K K + PL T
Sbjct: 15 GEVWIVEVEKDKFMYGGHGIAEFLGYKQPDKAIRDHVKKQWKCKFNDLKVQLNQPPLVTS 74
Query: 61 G--------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
ISE VY L+++S LP+A++F+RW+FEEVLP LR++G YSVE
Sbjct: 75 STPVNVPVNWQPHTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRRSGKYSVET- 133
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
++ + V+ K L + A ++ Q L+++ T I + + I +
Sbjct: 134 ----SNCTDVVNYEKQLAD----AQMECMQKKLELSEANTAIAELKRNYEQQISEFKERE 185
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
L + + N +N LL K ++
Sbjct: 186 YKMQLQMKDLANAANMTMTQFAVNALLAKDNIE 218
>gi|221141443|ref|ZP_03565936.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731462|ref|ZP_04865627.1| prophage L54a, antirepressor [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724705|gb|EES93434.1| prophage L54a, antirepressor [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|302751742|gb|ADL65919.1| prophage anitrepressor [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 254
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 28/251 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ I F + I I ++N F + VA +LG+ +N + I + + K
Sbjct: 1 MNEIKTFSNDMFSIL-IKQDNENNLFDLETVAKSLGFTQFKNGKQYIR--WETINKYLGK 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K I EP VY+L K+ A+KF+ W+ EVLP +RK G Y+ + +
Sbjct: 58 YLSQEVGKGDFIPEPMVYKLAFKAGNAVAEKFQDWLAMEVLPAIRKHGIYATDNVIEQTL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 KDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGT 163
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
L TQI A+ LNKLL + LQ KV+ + + + + + + +
Sbjct: 164 LATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTESDTIAIVRSD 220
Query: 236 GSTQ---QLKW 243
G Q +W
Sbjct: 221 GREDTVLQTRW 231
>gi|262380967|ref|ZP_06074105.1| prophage antirepressor [Bacteroides sp. 2_1_33B]
gi|262296144|gb|EEY84074.1| prophage antirepressor [Bacteroides sp. 2_1_33B]
Length = 249
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 13/230 (5%)
Query: 16 TIVDKDQNIWFVAKDVATALGYE--NSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
T+ +N F+ K++A L Y NS + N K R + T GG Q+V +++E
Sbjct: 7 TVYGTAENPLFLVKEIAEVLEYSERNSCKLTNLVEKDEKVRNIITTLGGNQEVWLLTEDG 66
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELA 133
+Y +L++S P A++F++ V +++L +R TG Y A K T + R +
Sbjct: 67 LYEVLMQSRKPIAKQFKKGV-KQILHEVRTTGGYI--ATKADDTPEEIMARALTIAQATL 123
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS----DNDEYLTITQIGERLNPP 189
++ + QL + + +IT + K + + + + +TQI +
Sbjct: 124 EKREERLKQLEAENKQKQEEITELRAENVELQKQSEYTRVILQSKQTVLVTQIAQDYG-- 181
Query: 190 QRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGST 238
AR N LL G+Q KV + K +G H G
Sbjct: 182 MSARRFNALLRDLGIQ-HKVRNQWILYGKYLNKGYVHSATHNYTHTNGIP 230
>gi|66395230|ref|YP_239526.1| ORF015 [Staphylococcus phage 187]
gi|122891722|ref|YP_001004268.1| anti-repressor protein [Staphylococcus phage phiETA2]
gi|122891792|ref|YP_001004337.1| anti-repressor protein [Staphylococcus phage phiETA3]
gi|148267289|ref|YP_001246232.1| prophage antirepressor [Staphylococcus aureus subsp. aureus JH9]
gi|150393339|ref|YP_001316014.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|253316884|ref|ZP_04840097.1| BRO domain-containing protein [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|257794849|ref|ZP_05643828.1| anti-repressor protein [Staphylococcus aureus A9781]
gi|258418165|ref|ZP_05682430.1| anti-repressor protein [Staphylococcus aureus A9763]
gi|258421462|ref|ZP_05684387.1| prophage antirepressor [Staphylococcus aureus A9719]
gi|258448941|ref|ZP_05697050.1| prophage antirepressor [Staphylococcus aureus A6224]
gi|258453919|ref|ZP_05701891.1| prophage antirepressor [Staphylococcus aureus A5937]
gi|282929264|ref|ZP_06336837.1| antirepressor [Staphylococcus aureus A10102]
gi|295406558|ref|ZP_06816364.1| antirepressor [Staphylococcus aureus A8819]
gi|297245284|ref|ZP_06929158.1| antirepressor [Staphylococcus aureus A8796]
gi|62635582|gb|AAX90693.1| ORF015 [Staphylococcus phage 187]
gi|121309201|dbj|BAF43823.1| anti-repressor protein [Staphylococcus phage phiETA2]
gi|121309271|dbj|BAF43892.1| anti-repressor protein [Staphylococcus phage phiETA3]
gi|147740358|gb|ABQ48656.1| prophage antirepressor [Staphylococcus aureus subsp. aureus JH9]
gi|149945791|gb|ABR51727.1| BRO domain protein [Staphylococcus aureus subsp. aureus JH1]
gi|257788821|gb|EEV27161.1| anti-repressor protein [Staphylococcus aureus A9781]
gi|257838958|gb|EEV63437.1| anti-repressor protein [Staphylococcus aureus A9763]
gi|257842388|gb|EEV66812.1| prophage antirepressor [Staphylococcus aureus A9719]
gi|257857837|gb|EEV80729.1| prophage antirepressor [Staphylococcus aureus A6224]
gi|257863784|gb|EEV86540.1| prophage antirepressor [Staphylococcus aureus A5937]
gi|269939846|emb|CBI48216.1| phage protein [Staphylococcus aureus subsp. aureus TW20]
gi|282589140|gb|EFB94238.1| antirepressor [Staphylococcus aureus A10102]
gi|285816533|gb|ADC37020.1| Antirepressor [Staphylococcus phage phiSaST5K]
gi|294968703|gb|EFG44726.1| antirepressor [Staphylococcus aureus A8819]
gi|297177955|gb|EFH37204.1| antirepressor [Staphylococcus aureus A8796]
gi|315128953|gb|EFT84950.1| BRO domain protein [Staphylococcus aureus subsp. aureus CGS03]
Length = 255
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 99/251 (39%), Gaps = 28/251 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ I F + I I ++N F + VA +LG+ +N + I + + K
Sbjct: 1 MNEIKTFSNDMFSIL-IKQDNENNLFDLETVAKSLGFTQFKNGKQYIR--WETINKYLGK 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K I EP VY+L K+ A+KF+ W+ EVLP +RK G Y+ + +
Sbjct: 58 YLSQEVGKGDFIPEPMVYKLAFKAGNAVAEKFQDWLAMEVLPAIRKHGIYATDNVIEQTL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 KDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGT 163
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
L TQI A+ LNKLL + LQ KV+ + + + + + +
Sbjct: 164 LATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTITIVRSD 220
Query: 236 GSTQ---QLKW 243
G Q +W
Sbjct: 221 GREDTVLQTRW 231
>gi|292397742|ref|YP_003517808.1| BRO-D [Lymantria xylina MNPV]
gi|291065459|gb|ADD73777.1| BRO-D [Lymantria xylina MNPV]
Length = 330
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 38/235 (16%)
Query: 8 EFESNKIR----TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK----- 58
+F+ +I + ++ + +A LGY+ +I H K K +
Sbjct: 7 KFKFGQIVCDLWIVEMENDKFMYSGSSIAEFLGYKCPKNSIRDHVKPKWKTTWEEIKNVA 66
Query: 59 -----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
ISE VY L+++S LP+A++F+RW+FE+VLP LRKTG Y V K
Sbjct: 67 TEIQLPPNWQPNTVFISEAGVYALIMRSKLPAAEEFQRWLFEKVLPELRKTGKYDV---K 123
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ S + ++ K + A ++ QL LK++ T I D ++K
Sbjct: 124 NQQQSTTEIVNYEKRFAD----AQMESLQLKLKLSEANTAIAKYDT-TISEMKRNYEHQM 178
Query: 174 DEY---------------LTITQIGERLNPPQRARFLNKLLLKRGL-QVSKVSGG 212
EY L + Q+ N +N LL K + + K+ G
Sbjct: 179 TEYKEREHKMQLQMKDMQLAMQQLSAAANMTMTQFAVNALLAKDNIAENEKMRGT 233
>gi|292397820|ref|YP_003517886.1| BRO-L [Lymantria xylina MNPV]
gi|291065537|gb|ADD73855.1| BRO-L [Lymantria xylina MNPV]
Length = 345
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 52/267 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R +++KDQ + FVAKDVA +L YE +A++ H K E
Sbjct: 6 IGEFKFGEDTFTLRYVLEKDQQVKFVAKDVAVSLRYERPADAVSKHVD--IKYKLTYAEL 63
Query: 62 GIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G Q +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 64 GRQIADPTLNVKLIVKKGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIP 123
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y P ++ V K + + K V K +++
Sbjct: 124 RVLCTGKYD---PAIKQREEENKQLVTKLIATFTDHTNALQAVVAQKTEELVKKQEFIER 180
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVS 207
+ AM K + + D L +T++ LN ++ + K LL + QV+
Sbjct: 181 IVAMKDKQIEAKD----LQVTRVMTDLNRMYTGFQETMQRKDEMMQKKDELLQTKDAQVT 236
Query: 208 -------KVSGGYRPTPKGEERGGKMC 227
+SG P E + +C
Sbjct: 237 ELVAKVVDLSGRAVQYPADERKHPVLC 263
>gi|126417585|gb|ABO13902.1| BRO-a [Bombyx mori NPV]
Length = 316
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ + F+F ++ +R I+D +Q + FVAKD+A++L Y N +A+ + K
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYILDDEQPVRFVAKDIASSLKYVNCKQAVIVNVDDKYKTTY 60
Query: 57 LKTEGG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +I++ V +L++KS LP A + + W+ EEV+
Sbjct: 61 SEHGSTPYTPAPDSVAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVI 120
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
P + TG Y+ T+ + ++K L ++ + +++ N VT G+
Sbjct: 121 PQVLCTGKYA--PAVEMNTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGLV 178
Query: 159 QLEAM--DIKHLPSSDNDEYLTITQ--IGERLNPP 189
Q M + + + + I Q I + NP
Sbjct: 179 QANTMLNEARRETAQLANRMADIAQDVIAKPNNPQ 213
>gi|327198754|emb|CCA61455.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 403
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH----CKGVAKRY------- 55
F F+ N ++ + DQ WF AKDV LGY + +A+ H KR
Sbjct: 109 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSDEKDAMKKHIQRYVPEKYKRSYEIINGG 167
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
P G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 168 DFGSPHPINGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AMET 224
Query: 112 PKLRATSASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGV 151
R ++ + +R + K E L +A + + + +L +NR
Sbjct: 225 ILNRNSNLESNMRLLLKQNESLLVKATVAEERAVLALNRLA 265
>gi|310828143|ref|YP_003960500.1| toxin-antitoxin system [Eubacterium limosum KIST612]
gi|308739877|gb|ADO37537.1| toxin-antitoxin system [Eubacterium limosum KIST612]
Length = 307
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 97/273 (35%), Gaps = 46/273 (16%)
Query: 6 PFEFES-NKIRTIVDKDQNIW------------------------FVAKDVATALGYENS 40
F+F+ +RT+V + W FV KD A L Y N+
Sbjct: 10 VFKFDGVTNLRTLVIE----WPVYDKLGEAIHDAFGNPVTRRDVGFVGKDAADILEYRNA 65
Query: 41 NEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ AI H KR + G QK+ +I+EP +Y L+ S + A++ +V VL
Sbjct: 66 SHAIMRHVAPGDRTKRTGVDGAGRSQKMWVINEPGLYGLIFGSKMEDARRLGDFVKRVVL 125
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
P++++ G+Y +A + L E ++ LL ++ KI D
Sbjct: 126 PSIQRYGAYMEPEVLAQAETDDA---ARDALFEALRKEKAHSCALLDELTEAQPKIEFYD 182
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS-------- 210
+ + + E + P L +LL + G S+ S
Sbjct: 183 TIGGAENACSMGDTAKMLANAGFLNEDNDCPLGRNNLYRLLRRWGYLCSQPSSFNTPYAW 242
Query: 211 ----GGYRPTPKGEERGGKMCDVPMQHVEGSTQ 239
G ++ K GG M V GS Q
Sbjct: 243 CMARGWFKVKEKRRILGGVSVLETMVLVTGSGQ 275
>gi|9631120|ref|NP_047790.1| Ld-bro-n [Lymantria dispar MNPV]
gi|3822388|gb|AAC70339.1| Ld-bro-n [Lymantria dispar MNPV]
Length = 338
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 45/260 (17%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F ++ +R +++KDQ + FVA+DVA +L YE +A++ H K E
Sbjct: 6 IGEFKFGEDTFTLRYVLEKDQQVKFVARDVAVSLRYERPADAVSKHVD--IKYKSTYAEL 63
Query: 62 GIQ----------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G Q +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 64 GRQIADPTLNVKLIVKKGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIP 123
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y P ++ V K + + K V K +++
Sbjct: 124 QVLCTGKYD---PAIKQREEENKQLVTKLIATFTDHTNALQAVVAQKTEELVKKQEFIER 180
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVS------- 207
+ A+ K + + D L +T++ LN + + ++++ ++ QV+
Sbjct: 181 IVAIKDKQIEAKD----LQVTRVMTDLNRMYTGFQETMQRKDEIMQQKDAQVTELVAKVV 236
Query: 208 KVSGGYRPTPKGEERGGKMC 227
+S P E + +C
Sbjct: 237 DLSERAVQYPADERKHPVLC 256
>gi|9799895|emb|CAA76843.2| hypothetical protein [Anticarsia gemmatalis nucleopolyhedrovirus]
Length = 261
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 32/248 (12%)
Query: 4 ITPFEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK---------GVA 52
I F+F +R ++D+D + FVAKD+A +L + N+ EA+ H G
Sbjct: 6 IGQFKFGEDVFTLRYVLDRD-IVKFVAKDIANSLKHTNAAEAVRNHVDIKYKTTYEQGET 64
Query: 53 KRYPLKTEGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+P T + +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 65 VSHPASTSLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCT 124
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y+ P ++ + + ++ + + K V K ++++ AM
Sbjct: 125 GKYN---PAIKQHEEALRQQQEENKQLVTKLIATFSEHSNAMRQELVKKQDFIERVVAMK 181
Query: 165 IKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
K + + D +T + N ++ + KL+ QV +SG P+
Sbjct: 182 DKQIEAKDQQVTRVMTDLNRMYNGFQDTMQKKDEQVTKLVA----QVIDLSGRAVQYPED 237
Query: 220 EERGGKMC 227
E + +C
Sbjct: 238 ERKHPVLC 245
>gi|114680055|ref|YP_758468.1| baculovirus repeated ORF-d [Plutella xylostella multiple
nucleopolyhedrovirus]
gi|91982119|gb|ABE68387.1| baculovirus repeated ORF-d [Plutella xylostella multiple
nucleopolyhedrovirus]
Length = 340
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 106/256 (41%), Gaps = 38/256 (14%)
Query: 3 TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
I F+F ++ +R ++++DQ + FVAKDVA +L Y + ++A K +T
Sbjct: 5 QIGQFKFGEDTFNLRYVLERDQQVRFVAKDVANSLKYADCDQAARKIVDAKYKITYEQTR 64
Query: 61 GG-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
+I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 65 HDDGSTSNSVVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLC 124
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG Y P ++ + V K + + + K V K ++++ A+
Sbjct: 125 TGKYD---PAIKQREEESKQLVTKLIATFTEHTNALQAVVAQKTEELVKKQEFIERIVAI 181
Query: 164 DIKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVS-------KVSG 211
K + + D L +T++ LN + + ++++ K+ QV+ +S
Sbjct: 182 KDKQIEAKD----LQVTRVMTDLNRMYTGFQETMQKKDEIMQKKDAQVTDLVAKVVDLSD 237
Query: 212 GYRPTPKGEERGGKMC 227
P + + +C
Sbjct: 238 RAVQYPADKRKHPVLC 253
>gi|282919703|ref|ZP_06327435.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
gi|282316341|gb|EFB46718.1| antirepressor [Staphylococcus aureus subsp. aureus C427]
Length = 255
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 28/251 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ I F + I I ++N F + VA +LG+ +N + I + + K
Sbjct: 1 MNEIKTFSNDMFSIL-IKQDNENNLFDLETVAKSLGFTQFKNGKQYIR--WETINKYLGK 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ + +
Sbjct: 58 YLSQEVGKGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATDNVIEQTL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 KDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGT 163
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
L TQI A+ LNKLL + LQ KV+ + + + + + +
Sbjct: 164 LATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTITIMRSD 220
Query: 236 GSTQ---QLKW 243
G Q +W
Sbjct: 221 GREDTVLQTRW 231
>gi|292397703|ref|YP_003517769.1| BRO-B [Lymantria xylina MNPV]
gi|291065420|gb|ADD73738.1| BRO-B [Lymantria xylina MNPV]
Length = 299
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 26/207 (12%)
Query: 1 MSTITP--FEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RY 55
MS + F+F +R ++++DQ++ FVAKDVAT L Y N AI H K +
Sbjct: 1 MSQVKIGQFKFGEDAFTLRYVLERDQSVKFVAKDVATNLKYGNPANAIAKHVDDKYKSKL 60
Query: 56 PLKTEGG----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
T+ G ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 EQDTQNGDLASNALARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y+ + + + + L E + L++ N + V +
Sbjct: 121 QVLCTGKYAPAVKMDTSGALVKIDDLTAKLTEANANLMEANKSLIVFANEMI-----VAR 175
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERL 186
+A + + + + +L
Sbjct: 176 RDAETARRDCEAARQDCENARRETAQL 202
>gi|253999182|ref|YP_003051245.1| prophage antirepressor [Methylovorus sp. SIP3-4]
gi|253985861|gb|ACT50718.1| prophage antirepressor [Methylovorus sp. SIP3-4]
Length = 119
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA--HCKGVAKRYPLKTEGGIQKVR 67
+++K+RT++ ++ WF A DV L +N+ A+ + Y L G
Sbjct: 2 DTHKVRTVL-QEGVPWFHAADVCKVLAIKNATVALKQASLEPEDKRSYSLGLPGKAPM-- 58
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
++E +Y L++ S PS++ F+RWV VLPTLRKTG+Y + K+
Sbjct: 59 FVNETGLYLLVMNSRKPSSRPFQRWVTGVVLPTLRKTGAYVMGEEKVTRPD 109
>gi|326407432|gb|ADZ64503.1| anti-repressor protein [Lactococcus lactis subsp. lactis CV56]
Length = 255
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 22/243 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE---NSNEAINAHCKGVA-KRYP 56
M+ + F + + + + + F A+ VA +LG N + I + +Y
Sbjct: 1 MNELQNFTNGIFNL-DVKVEGEEVLFSAEQVAKSLGLTQKQNKSGKIYESIRWETINKYL 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ G I+K ISEP VY+L K+ ++KF W+ EVLPT+RK G+Y +A
Sbjct: 60 PQLSGEIEKGSFISEPMVYKLAFKANNAVSEKFTDWLAVEVLPTIRKHGAYMTDAKVQDV 119
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVN--------------RGVTKITGVDQLEA 162
S + + + KQ L+ +Q+ K R + KI + ++
Sbjct: 120 ISGNGLADLLLQAGNQIKQLELEKSQMKPKALFADSVSASKNTILIRDLAKILKQNGIDI 179
Query: 163 MDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG-GYRPTPKGE 220
+ K L + D + +IG N P QR+ L L V TPK
Sbjct: 180 GE-KRLFTWLRDNGYLVKKIGSDYNSPTQRSMNLGILEFTENTHVHNSGKITVTKTPKVT 238
Query: 221 ERG 223
+G
Sbjct: 239 GKG 241
>gi|116326076|ref|YP_803401.1| baculovirus repeated ORF-b [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180814|gb|ABI13791.1| baculovirus repeated ORF-b [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 329
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 32/248 (12%)
Query: 4 ITPFEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK---------GVA 52
I F+F +R ++D+D + FVAKD+A +L + N+ EA+ H G
Sbjct: 6 IGQFKFGEDVFTLRYVLDRD-IVKFVAKDIANSLKHTNAAEAVRKHVDIKYKTTYEQGET 64
Query: 53 KRYPLKTEGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+P T + +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 65 VSHPASTSLVKRGDPLYLQPHTVLITKSGVIQLIMKSKLPYAVELQEWLLEEVIPQVLCT 124
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y+ P ++ + + ++ + + K V K ++++ AM
Sbjct: 125 GKYN---PAIKQHEEALRQQQEENKQLVTKLIATFSEHSNAMRQELVKKQDFIERVVAMK 181
Query: 165 IKHLPSSDNDEYLTITQIGERLN-----PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
K + + D +T + N ++ + KL+ QV +SG P+
Sbjct: 182 DKQIEAKDQQVTRVMTDLNRMYNGFQDTMQKKDEQVTKLVA----QVIDLSGRAVQYPED 237
Query: 220 EERGGKMC 227
E + +C
Sbjct: 238 ERKHPVLC 245
>gi|237643687|ref|YP_002884377.1| BRO-D [Bombyx mandarina nucleopolyhedrovirus]
gi|229358233|gb|ACQ57328.1| BRO-D [Bombyx mandarina nucleopolyhedrovirus]
Length = 348
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 46/263 (17%)
Query: 4 ITPFEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------ 54
I F+F ++ +R ++++ +Q + FVAKD+A L ++N+ +AI H K
Sbjct: 6 IGEFKFGEDTFTLRYVLEQGNQQVKFVAKDIANKLNFKNTKKAIRDHVDDKYKTAYEDGE 65
Query: 55 -------YPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
+ +G +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 LLVTHSPNSIVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLC 125
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG Y P ++ V K + + + K K ++++ +
Sbjct: 126 TGKYD---PAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIITI 182
Query: 164 DIKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVSK--- 208
K + + D L +T++ LN ++ ++K LL + QVS
Sbjct: 183 KDKQIEAKD----LQVTRVMTDLNRMYTGFRETMQRKDEMMHKKDELLQVKDTQVSNLIA 238
Query: 209 ----VSGGYRPTPKGEERGGKMC 227
+S P + + +C
Sbjct: 239 KMIDLSDRAVQYPADKRKHPVLC 261
>gi|285002412|ref|YP_003422476.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343672|gb|ACH69487.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 509
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 25/214 (11%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG--------------- 62
V+KD + +A LGY+ +AI H + ++ + + G
Sbjct: 22 VEKD-KFMYGGHGIAEFLGYKLPAKAIRDHVRTEWRKNWEEIQRGLNQTPCMTSSNYTKL 80
Query: 63 ----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
ISE VY L+++S LP+A++F W+FE+VLP LRKTG Y V+ ++ +S
Sbjct: 81 PVNWHPHTVFISEAGVYALIMRSKLPTAEEFRSWLFEKVLPELRKTGKYCVQ-DYVQQSS 139
Query: 119 ASTVLRVHKHLEELAK---QAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
++ ++ K L + Q L++ Q++ K + + +I L ++ +S E
Sbjct: 140 STEIVNYDKKLADAQMEVLQLKLENTQIVAKYDARIAEINQQHALVIVEKNQQHASQITE 199
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
Y +R Q + + + + LQ+ +
Sbjct: 200 YRLANLEMKRNYEHQMSEY-KEREYRMQLQMKDM 232
>gi|282917214|ref|ZP_06324969.1| antirepressor [Staphylococcus aureus subsp. aureus D139]
gi|282318841|gb|EFB49196.1| antirepressor [Staphylococcus aureus subsp. aureus D139]
Length = 254
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 99/251 (39%), Gaps = 28/251 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY---ENSNEAINAHCKGVAKRYPL 57
M+ I F + I I ++N F + VA +LG+ +N + I + + K
Sbjct: 1 MNEIKTFSNDMFSIL-IKQDNENNLFDLETVAKSLGFTQFKNGKQYIR--WETINKYLGK 57
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K I E VY+L K+ +A+KF+ W+ EVLP +RK G Y+ + +
Sbjct: 58 YLSQEVGKGDFIPEAMVYKLAFKAGNSTAEKFQDWLAMEVLPAIRKHGIYATDNVIEQTL 117
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ V ++ +Q + L ++ K VD++ +
Sbjct: 118 KDPDYIITVLTEYKKEKEQ----NLLLQQEIGELKPKADYVDEI----------LKSTGT 163
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVE 235
L TQI A+ LNKLL + LQ KV+ + + + + + +
Sbjct: 164 LATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSEHMGKSYTDSDTITIVRSD 220
Query: 236 GSTQ---QLKW 243
G Q +W
Sbjct: 221 GREDTVLQTRW 231
>gi|169634092|ref|YP_001707828.1| hypothetical protein ABSDF2615 [Acinetobacter baumannii SDF]
gi|169152884|emb|CAP01922.1| conserved hypothetical protein; putative Prophage antirepressor
[Acinetobacter baumannii]
Length = 94
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS ++ F F N+IRTIV D IWFVA DVAT LGY N+ + + A + L+
Sbjct: 1 MSEMSVFNFNQNEIRTIVKDDGEIWFVAADVATVLGYRNAPDMVRNLDVEEADTHNLRIR 60
Query: 61 G-----GIQKVRIISEPDVYRLLVKSTLPSAQKF 89
++V II+E +Y ++S P A++F
Sbjct: 61 SDNGVLQDRQVTIINESGLYSATLRSRKPEAKQF 94
>gi|183983915|ref|YP_001852206.1| phage antirepressor protein [Mycobacterium marinum M]
gi|183177241|gb|ACC42351.1| phage antirepressor protein [Mycobacterium marinum M]
Length = 340
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 27/256 (10%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG- 61
I F ++ +IRTIV D W VA D+ L N + A+ KR ++E
Sbjct: 51 AIEVFAYKHTRIRTIVV-DGRRWAVAADICGFLELSNPSMALKR-IDDADKRILHRSEAL 108
Query: 62 ------------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ V ++SE L++ S P A++F R++ V P++R TGSY+
Sbjct: 109 NSIEGFWESFAAKVHSVGLVSEDGATDLVLDSRKPDARRFRRFLTHTVWPSIRDTGSYTT 168
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
AP L T + +++ + KD QL +++ + K
Sbjct: 169 -APALPQTREERLALAVIDAQQMITE---KDEQLAALTGEKKCLEAAIERDAPLVAKAEA 224
Query: 170 SSDNDEYLT-------ITQIGERLNPPQRARFLNKLLLKRGLQVS-KVSGGYRPTPKGEE 221
+ +D + + G++ + + + L GL + + T +
Sbjct: 225 HTGSDSAIHRQAFAREVQHWGQKQGVDIKHSEVMRFLSHIGLFIRGDRTDTGHATADAQR 284
Query: 222 RGGKMCDVPMQHVEGS 237
RG D +
Sbjct: 285 RGLAFTDKGTAKNGHA 300
>gi|9630955|ref|NP_047552.1| BRO-d [Bombyx mori NPV]
gi|3745974|gb|AAC63821.1| BRO-d [Bombyx mori NPV]
Length = 349
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 47/264 (17%)
Query: 4 ITPFEF--ESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
I F+F ++ +R ++++ + FVAKD+A++L Y N +A++ H K ++
Sbjct: 6 IGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESG 65
Query: 61 GG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 ARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVL 125
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
TG Y P ++ V K + + + K K ++++ A
Sbjct: 126 CTGKYD---PAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIA 182
Query: 163 MDIKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVSK-- 208
+ K + + D L +T++ LN ++ ++K LL + QVS
Sbjct: 183 IKDKQIEAKD----LQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLI 238
Query: 209 -----VSGGYRPTPKGEERGGKMC 227
+S P + + +C
Sbjct: 239 AKMIDLSDRAVQYPADKRKHPVLC 262
>gi|9631452|ref|NP_048265.1| ORF MSV194 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049805|gb|AAC97765.1| ORF MSV194 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 409
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEG---- 61
F + KI I + +F KD+A L Y+++N+AI H K + G
Sbjct: 8 FNNKKI-HIAIYENKPYFKGKDIAEILEYKDTNDAIKKHVDDDDKSKYEDLINRPGILPS 66
Query: 62 ---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ ISE +Y L++ S A+ F++W+ EVLP +RK G Y ++ T+
Sbjct: 67 LTYNEKNTIYISESGLYSLILSSKKSEAKIFKKWITNEVLPNIRKHGEYKIKKELETLTT 126
>gi|296169786|ref|ZP_06851401.1| prophage antirepressor protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895580|gb|EFG75279.1| prophage antirepressor protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 263
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 22/173 (12%)
Query: 1 MSTITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC---KGVAKRYP 56
MS + F +E +IRT+ D+ W VA D+ A+ + + AI K V +R
Sbjct: 1 MSAVELFTYEETAQIRTVT-IDERRWAVAADICAAIDIRDVSAAIAKLDQRDKMVIRRSD 59
Query: 57 LKTEG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+Q + ++SE L+++S P A++F R++ EV P +R TGSY
Sbjct: 60 TPGSNQGIWQQISPRVQSIGLVSEDGATDLVLESRKPEARRFRRFLTHEVWPAIRDTGSY 119
Query: 108 SVEAPKLRAT--------SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
S SA V + + + EL QA + L + + V
Sbjct: 120 STVPTLTDDELIHRALEVSARRVAELTERVAELEPQAAVATKLLDAEGDLSVR 172
>gi|15617593|ref|NP_258393.1| hypothetical protein [Spodoptera litura NPV]
gi|15553329|gb|AAL01807.1|AF325155_119 hypothetical protein [Spodoptera litura NPV]
Length = 478
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 22 QNIWFV----------AKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTE 60
+W V +A LGY+ +AI H K G K+ PL T
Sbjct: 15 GEVWIVEMEKDKFMYGGHGIAEFLGYKLPAKAIRDHVKPAWRKNWEEIEGDLKQTPLVTS 74
Query: 61 GGI--------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
ISE VY L+++S LP+A++F+RW+FEEVLP LRK+G YS+E
Sbjct: 75 SAPVNVPVNWQPHTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRKSGKYSIET- 133
Query: 113 KLRATSASTVLRVHKHLEELA---KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
++ + V+ K L + Q L+ ++ + + I+ + + I
Sbjct: 134 ----SNCTDVVNYEKQLADAQMECMQKKLELSEANTAIAKYEVSISELKRNYEQQISEFK 189
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
+ L + + N +N LL K ++
Sbjct: 190 EREYKMQLQMKDLANAANMTMTQFAVNALLAKDNIE 225
>gi|237643572|ref|YP_002884262.1| BRO-A [Bombyx mandarina nucleopolyhedrovirus]
gi|229358118|gb|ACQ57213.1| BRO-A [Bombyx mandarina nucleopolyhedrovirus]
Length = 330
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ + F+F ++ +R ++ ++ + FVAKD+A +L Y N +A+ H K
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLGDEKQVKFVAKDIAISLKYVNCKDAVIKHVNDKYKYTY 60
Query: 57 LKTEGG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
++ +I++ V +L++KS LP A + + W+ EEV+
Sbjct: 61 GESGSRLATPAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYALELQAWLLEEVI 120
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
P + TG Y+ T+ + ++K L ++ + +++ N VT G+
Sbjct: 121 PQVLCTGKYA--PAVEMDTNYGVIEELNKKLVFASESLAEANEKIIHFANALVTANAGLV 178
Query: 159 QLEAMDIKHLPSSDN--DEYLTITQIGERL 186
Q M + +N + + +L
Sbjct: 179 QANTMLNEARKDCENARKDCENARRETAQL 208
>gi|126417636|gb|ABO13905.1| BRO-d [Bombyx mori NPV]
Length = 347
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 105/262 (40%), Gaps = 45/262 (17%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------------ 49
I F+F ++ +R ++D +Q + FVAKD+A +L Y + +A+ H
Sbjct: 6 IGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYASYEKAVRVHVDVKYKSLFENAGQ 65
Query: 50 -GVAKRYPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
G + +G +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 IGHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y P ++ V K + + + K K ++++ A+
Sbjct: 126 GKYD---PAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFEKQEFIERIIAIK 182
Query: 165 IKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVSK---- 208
K + + D L +T++ LN ++ ++K LL + QVS
Sbjct: 183 DKQIEAKD----LQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIAK 238
Query: 209 ---VSGGYRPTPKGEERGGKMC 227
+S P + + +C
Sbjct: 239 MIDLSDRAVQYPADKRKHPVLC 260
>gi|47569650|ref|ZP_00240326.1| anti-repressor [Bacillus cereus G9241]
gi|47553692|gb|EAL12067.1| anti-repressor [Bacillus cereus G9241]
Length = 258
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 83/215 (38%), Gaps = 15/215 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F + + ++ + F ++ A +LGY + K ++ K +
Sbjct: 1 MNQLQVFNHQEFGVLEVIQLNGKEMFNLENAAWSLGYTKVAKGKTYLRKDRIEKVIQKAD 60
Query: 61 GG---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
I+E +Y L+ +S A++F +WV EVLP++RK G+Y + +A
Sbjct: 61 ISVVVHDGQPYITEDGLYELIFESETQKAKEFRKWVTSEVLPSIRKHGAYMTDQVLEQAV 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T+ + + L+E ++ ++ + +T + D + +
Sbjct: 121 TNPDFAIGLLTKLKEEKEKL----AAAQQQIVQQQPLVTFAEACMQSD-------KSLKV 169
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSG 211
+ ++ + N R L L + L + +
Sbjct: 170 SEVAKLAAKHNIKIGQRQLYAKLREWNLIFKRSTE 204
>gi|15079001|ref|NP_149752.1| 289L [Invertebrate iridescent virus 6]
gi|82012134|sp|Q91FN5|289L_IIV6 RecName: Full=Putative Bro-N domain-containing protein 289L
gi|15042370|gb|AAK82150.1|AF303741_289 289L [Invertebrate iridescent virus 6]
Length = 417
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 32/195 (16%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGG 62
F + ++I+ D +F KDV LGY++ +A+ H K +K GG
Sbjct: 16 ITFCNQEHQIKLAGTVD-TPYFCGKDVCKVLGYKDIKDALKKHVDREDKLPLSEIKKVGG 74
Query: 63 IQKVRI-----------------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
ISE +Y L++ S P A+ F R V +LP++RK G
Sbjct: 75 TAPPTFLGQTYAYLSHNDGRAVYISEGGLYSLIMSSEAPFAKDFRRLVCNVILPSIRKFG 134
Query: 106 SYS--------VEAPKLRATSASTVLRVHKHLEELAKQAGLK----DNQLLLKVNRGVTK 153
SYS +E L+ S + K E + A +K +L ++ R +
Sbjct: 135 SYSIEQQLSSAMEQLALKDKSEQELQFQLKQEREEKENAYIKLRSETKRLKQQIKRTLEF 194
Query: 154 ITGVDQLEAMDIKHL 168
Q+E ++ ++
Sbjct: 195 NQATKQIEPLEYIYI 209
>gi|209401162|ref|YP_002274031.1| baculovirus repeated ORF d [Helicoverpa armigera NPV NNg1]
gi|209364414|dbj|BAG74673.1| baculovirus repeated ORF d [Helicoverpa armigera NPV NNg1]
Length = 501
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 17 IVDKDQNIWFV-AKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEG--- 61
I + ++N + VA ALGY+ A+ H K GV R+ L T
Sbjct: 15 ITEIEENRFLCSGHGVAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNRHSLVTSSDSI 74
Query: 62 -----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
I+E +Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +
Sbjct: 75 ELPLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRRQSS 134
Query: 117 TSASTVL----RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T ST + + +++ A Q L+ ++ +K+ T ++ + + + +
Sbjct: 135 TDNSTEVVSYDQKLANVQMEALQLKLQLSEANIKIAEWNTNMSEMKRNYEQQMSEYKERE 194
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
L + + + N N LL K +
Sbjct: 195 FKMQLQMKDMAHQANMSMFQFAANALLAKDNI 226
>gi|253690480|ref|YP_003019670.1| prophage antirepressor [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251757058|gb|ACT15134.1| prophage antirepressor [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 192
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG- 61
++ +FE IR IV+ WF+ KD+ L NS+ A+N H K L +
Sbjct: 30 DVSVIKFEDKTIR-IVNVYGEPWFIVKDICEVLSLSNSHMALNEHEKN---TISLTYDNR 85
Query: 62 GIQKVRIISEPDVYRLL---VKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G +I+E Y+LL K++ P +F WVF EV+P++RKTGSY V L
Sbjct: 86 GNPNYDVIAESGFYKLLAFNCKTSPPDTFIHRFSNWVF-EVIPSIRKTGSYGVPFASLND 144
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
S L K + K + L
Sbjct: 145 HSRRKALYNKKASKRGKDLQACKGEKSRLIAEEA 178
>gi|39996813|ref|NP_952764.1| BRO family protein, truncation [Geobacter sulfurreducens PCA]
gi|39983701|gb|AAR35091.1| BRO family protein, truncation [Geobacter sulfurreducens PCA]
Length = 101
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
+V D WFVA DV L +N ++A++A T GG QKV +I+EP +Y
Sbjct: 3 VVMIDNEPWFVAADVCKVLEIQNVSKAVSALDPDEKGLTTSYTPGGPQKVTVINEPGLYS 62
Query: 77 LLVKSTLPSAQKFERW 92
L++ S PSA++F+RW
Sbjct: 63 LIMTSRKPSAKQFKRW 78
>gi|330999690|ref|ZP_08323399.1| BRO family protein [Parasutterella excrementihominis YIT 11859]
gi|329574196|gb|EGG55772.1| BRO family protein [Parasutterella excrementihominis YIT 11859]
Length = 279
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+T F FE IR D FVA DV AL +N +A+ + + +G
Sbjct: 4 QALTNFTFEDCSIRVFGDF-IKPLFVAADVCKALSIQNVTQALQSLAPFERSMLNIGRQG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPS-----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+++E +Y L+++ A +F WV EVLP +RK G Y+V+ + +
Sbjct: 63 ---NANVVTESGLYTLILRCRDAVKEGTFAYRFRVWVTNEVLPAIRKQGFYAVQKEQNSS 119
Query: 117 TSAST-VLRVHKHLEELAKQAGLKDNQL--LLKVNRGVTKITGVDQ 159
+ + + + + AK+ + + +KV + + T + Q
Sbjct: 120 LITNAQQVAIQQAVARRAKKTAVYYQTIYRAIKVRYQIPRYTELKQ 165
>gi|255652572|ref|ZP_05399474.1| prophage antirepressor [Clostridium difficile QCD-37x79]
Length = 276
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 19/227 (8%)
Query: 6 PFEFE--SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-AKRYP-----L 57
F E +RTI +D +I A+D A G+ + K V KR
Sbjct: 9 VFSNEELGVNVRTISYEDGSIGINAEDTAIGFGWCKIEKKGEKEYKSVRWKRMNEFSKEF 68
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
+ K ISE Y L +K+ +A KF++W+ +++PT+RK G+Y +
Sbjct: 69 GFDHLWSKDDYISESLFYMLGMKAKNEAAVKFQKWLAIDIIPTIRKHGAYMTDTKIEEIL 128
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
++ T++++ L++ ++ + N +I G +L+ N+
Sbjct: 129 SNPDTIIKLATDLKKEREKRKALEI-----TNNKQQQIIG--ELKPKADYTDLILRNEGL 181
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+TITQI + +A +N L + G+Q + S + + +G
Sbjct: 182 VTITQIAKDYGMSGKA--MNNKLNELGIQFKQ-SRQWLLYSDHQAKG 225
>gi|148750866|ref|YP_001285910.1| hypothetical protein [Lactobacillus phage LL-H]
gi|1395130|gb|AAB06224.1| hypothetical protein [Lactobacillus phage LL-H]
Length = 291
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 98/251 (39%), Gaps = 14/251 (5%)
Query: 2 STITPFEFESNKI-RTIVDKDQNIWFVAKDVATALGYE---NSNEAINAHCKGVAKRYPL 57
+ + FE I + + ++F A+ A LG N + + +
Sbjct: 3 NEVQIFENNGRGISLPVKEVGGQVYFEAEAAAIGLGITTEVNGDTYVR--WPRINSYLGF 60
Query: 58 KTEGG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-EAPKLR 115
T G I+K I+EP Y+L K++ A+KF+ WV EVLP++RK G+Y+ E +
Sbjct: 61 ATSGKKIKKGDWITEPQFYKLAFKASNDVAEKFQDWVASEVLPSIRKHGAYATPETIESI 120
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ +++ + L++ +Q + + + + + + +
Sbjct: 121 LANPDNGIKLLQALKDERRQKEQALLEASKEREARAIAEQKLSEAKPKLDYVDKILASKK 180
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG---GKMCDVPMQ 232
+ T + A N++L + +Q KV Y + + G + +
Sbjct: 181 TILTTHLATDYG--CSAVAFNRMLCDKKIQ-RKVRDTYVLYSQYQGHGWTHTFARAIKTK 237
Query: 233 HVEGSTQQLKW 243
H + +Q++W
Sbjct: 238 HGQEIKEQMEW 248
>gi|292397702|ref|YP_003517768.1| BRO-A [Lymantria xylina MNPV]
gi|291065419|gb|ADD73737.1| BRO-A [Lymantria xylina MNPV]
Length = 350
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 3 TITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+T F + ++ T+ D+ Q W VA A L Y N +AI H ++ + +
Sbjct: 2 ALTKVNFVNGPLEVFTVQDEHQEKWMVANPFAECLNYTNKKKAIQQHVSTENQKMFEELK 61
Query: 61 GGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + + I+ V+ L+ S +P+A++F++W ++LPTL + G YS+
Sbjct: 62 GSHCGTLTSSLHPQTKFINRAGVFELINSSEMPAAKRFKQWNANDLLPTLCQEGEYSMSK 121
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKV 147
+ A + VH E + +KD L ++
Sbjct: 122 DA-PSDIAQGMNAVHAATNEGREAPWIKDLNYLKEI 156
>gi|126642079|ref|YP_001085063.1| hypothetical protein A1S_2034 [Acinetobacter baumannii ATCC 17978]
Length = 220
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 46 AHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
KG+A + T GG QK++ ++EP++YR++ +S P A++F+ WVF EVLPT+RKTG
Sbjct: 1 MDEKGLADCHT-PTNGGNQKIKFVNEPNLYRIIFRSNKPEAKQFQDWVFNEVLPTIRKTG 59
Query: 106 SYSVEAP--KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
Y P K + S + + + + A G K + + +TGV
Sbjct: 60 KYEAPKPVEKRNYLNNSDMNNIKRLIWTCADHFGHK-GSFNQAIWACLRDVTGVPSPAKF 118
Query: 164 DIKHLP--SSDNDEYLTITQ 181
+++HLP + + L I Q
Sbjct: 119 EVEHLPVLAEEFKRILNIVQ 138
>gi|148368838|ref|YP_001256968.1| bro-1 [Spodoptera litura granulovirus]
gi|147883351|gb|ABQ51960.1| bro-1 [Spodoptera litura granulovirus]
Length = 471
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 16/216 (7%)
Query: 1 MSTITPFEFESNKIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
MSTIT +++ IR + VD + +W++A A L Y N + A++ ++ +
Sbjct: 1 MSTITVYKYGEEYIRVVSIVDNNSEVWYLANPFAKVLNYSNYHNAVSKLVSPQNQKQLMN 60
Query: 59 TEGG------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ + I++ ++ L+ S +P AQ+F+ WV ++L L KTG YS+
Sbjct: 61 IDNNDNFKSLHPYSKFINQAGLFELIQSSCMPKAQQFKDWVTSKLLTRLCKTGKYSM-TD 119
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLK--DNQLLLKVNRGVTKITGVDQLEA-----MDI 165
A + +H E + +K D +V + + + + M
Sbjct: 120 NAPAQINDAMNTIHAATNEGTQAPWIKQEDESAQYQVMKMQMEKMENEAIVQRKQMEMAD 179
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLK 201
L L + + + +R +N L +
Sbjct: 180 LQLRHERELSDLRLNYEHQLADYKERLLKVNLKLQQ 215
>gi|15426361|ref|NP_203661.1| bro-c [Helicoverpa armigera NPV]
gi|15384437|gb|AAK96348.1|AF303045_90 bro-c [Helicoverpa armigera NPV]
Length = 501
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 17 IVDKDQNIWFV-AKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEG--- 61
I + ++N + VA ALGY+ A+ H K GV ++ L T
Sbjct: 15 ITEIEENRFLCSGHGVAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSI 74
Query: 62 -----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
I+E +Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +
Sbjct: 75 ELPLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRQQSS 134
Query: 117 TSASTVL----RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T ST + + +++ A Q L+ ++ +K+ T ++ + + + +
Sbjct: 135 TDNSTEIVSYDQKLANVQMEALQLKLQLSEANIKIAEWNTNMSEMKRNYEQQMSEYKERE 194
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
L + + + N N LL K +
Sbjct: 195 FKMQLQMKDMAHQANMSMFQFAANALLAKDNI 226
>gi|13751089|emb|CAC37064.1| Bro-III protein [Bombyx mori NPV]
Length = 348
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 108/263 (41%), Gaps = 46/263 (17%)
Query: 4 ITPFEF--ESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------ 54
I F+F ++ +R ++++ +Q + FVAKD+A +L Y + +A+ H G K
Sbjct: 6 IGEFKFGEDTFTLRYVLEQGNQQVKFVAKDIAISLKYASYEKAVRVHVDGKYKSTFEHAG 65
Query: 55 -------YPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
+ +G + +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 66 QIGHHAPNSVAKQGDPLYLHPRTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIPQVLC 125
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG Y P ++ V K + + + K K ++++ A+
Sbjct: 126 TGKYD---PAIKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAI 182
Query: 164 DIKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNK---LLLKRGLQVSK--- 208
K + + D L +T++ LN ++ ++K LL + QVS
Sbjct: 183 KDKQIEAKD----LQVTRVMTDLNRMYTGFQETMQRKDEMMHKKDELLQVKDTQVSNLIA 238
Query: 209 ----VSGGYRPTPKGEERGGKMC 227
+S P + + +C
Sbjct: 239 KMIDLSDRAVQYPADKRKHPVLC 261
>gi|9630901|ref|NP_047498.1| BRO-c [Bombyx mori NPV]
gi|3745920|gb|AAC63767.1| BRO-c [Bombyx mori NPV]
Length = 318
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-- 54
M+ + F+F ++ +R ++ +Q + FVAKD+A++L Y N AI H G K
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLGDEQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTF 60
Query: 55 -----------YPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ +G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 EHADQIQHHAPDSVAKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y AP + + + ++ ++L N L + NR + I ++
Sbjct: 121 QVLCTGKY---APAVEMDTNDVIAKIDDLTQKLTV-----ANADLAEANRSL--ILFANE 170
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERL 186
+ + + + + + +L
Sbjct: 171 M--IVARRDAETARQDCENARRETAQL 195
>gi|12597590|ref|NP_075174.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483856|gb|AAG53848.1|AF271059_105 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 501
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 17 IVDKDQNIWFV-AKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEG--- 61
I + ++N + VA ALGY+ A+ H K GV ++ L T
Sbjct: 15 ITEIEENRFLCSGHGVAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSI 74
Query: 62 -----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
I+E +Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +
Sbjct: 75 EMPLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRQQSS 134
Query: 117 TSASTVL----RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T ST + + +++ A Q L+ ++ +K+ T ++ + + + +
Sbjct: 135 TDNSTEVVSYDQKLANVQMEALQLKLQLSEANIKIAEWNTNMSEMKRNYEQQMSEYKERE 194
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
L + + + N N LL K +
Sbjct: 195 FKMQLQMKDMAHQANMSMFQFAANALLAKDNI 226
>gi|326693226|ref|ZP_08230231.1| phage antirepressor (Staphylococcus prophage phiPV83) [Leuconostoc
argentinum KCTC 3773]
Length = 253
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 34/246 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN--SNEAINAHCKGVAKRYPLK 58
M+ + F ++ K++ +++ I F A+ A LG S+ I+ + V K +
Sbjct: 1 MNEVQVF--DNLKVK---EENGQILFDAESAAIGLGISRIASSGNISVRWERVNKYLNVP 55
Query: 59 TEGGI-QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL--- 114
T G ++ I+EP Y+L +K+ +A+KF+ WV EVLP +RK G+Y
Sbjct: 56 TSGHELKRGDFITEPQFYKLAIKANNETAEKFQDWVTSEVLPAIRKHGTYMTNEKAEALI 115
Query: 115 ---RATSASTVLRVHKHLE-------ELAKQA------GLKDNQLLLKVNRGVTKITGVD 158
T A +++ + L+ E+ +A +N +L+ + + G+D
Sbjct: 116 NRPNDTLADLLIQAGEQLKAKDIQISEMKPKALFADAVDASENSILVGQLAKLLRQNGID 175
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYRPTP 217
+ L + GE+ N P Q++ L + KR V+ G R T
Sbjct: 176 IGQNRLFNWLRDHEYLGVR-----GEQRNLPTQKSMDLEIMETKRRT-VNNPDGSVRITT 229
Query: 218 KGEERG 223
+ G
Sbjct: 230 TPKITG 235
>gi|18138296|ref|NP_542731.1| bro [Helicoverpa zea SNPV]
gi|10442560|gb|AAG17373.1|AF275264_7 Orf60-like protien [Helicoverpa zea SNPV]
gi|18028678|gb|AAL56114.1|AF334030_39 ORF108 [Helicoverpa zea SNPV]
Length = 501
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 17 IVDKDQNIWFV-AKDVATALGYENSNEAINAHCK-----------GVAKRYPLKTEG--- 61
I + ++N + VA ALGY+ A+ H K GV ++ L T
Sbjct: 15 ITEIEENRFLCSGHGVAEALGYKCPRRALYDHVKPQWRKTWAEIKGVLNQHSLVTSSDSI 74
Query: 62 -----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
I+E +Y L+++S LP+A++F+ W+FEEVLP LR+TG YS+E + +
Sbjct: 75 EMPLNWQPNTLFITEAGIYALIMRSKLPAAEEFQSWLFEEVLPELRRTGKYSIENRRQSS 134
Query: 117 TSASTVL----RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
T ST + + +++ A Q L+ ++ +K+ T ++ + + + +
Sbjct: 135 TDNSTEVVSYDQKLANVQMEALQLKLQLSEANIKIAEWNTNMSEMKRNYEQQMSEYKERE 194
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
L + + + N N LL K +
Sbjct: 195 FKMQLQMKDMAHQANMSMFQFAANALLAKDNI 226
>gi|261214076|ref|ZP_05928357.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
gi|260915683|gb|EEX82544.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
Length = 123
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 24 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 80
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ I+SE +Y+L+++ST P A+KF+ WV V
Sbjct: 81 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTV 123
>gi|254693795|ref|ZP_05155623.1| Phage-related DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
Length = 113
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL 57
M+ I F F +K+R ++ K WFVA DV LG +++ A+ + H +G + +
Sbjct: 14 MTEI--FNFMDHKVRVVLLK-GEPWFVAADVCRCLGIKHTGSAVVSADVHERGWLAKSSV 70
Query: 58 KTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ I+SE +Y+L+++ST P A+KF+ WV V
Sbjct: 71 GNSHVSFPNRGAVIVSEARLYKLIMRSTKPEAKKFQNWVTGTV 113
>gi|77462158|ref|YP_351662.1| hypothetical protein RSP_1616 [Rhodobacter sphaeroides 2.4.1]
gi|77386576|gb|ABA77761.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 151
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYE--------NSNEAINAHCKGVAK----RYPLKTEGGIQ 64
+V + N WF+ +DV ALGY N + A A+ + + + G +
Sbjct: 1 MVMLEGNPWFILRDVLIALGYNLGPRTQTPNVSVAARKLASDEAQLYRIQVKVVSRSGAR 60
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
+V +ISE + +L+++ P A+KF+ WV EVLP++RKTG+Y++ ++VL
Sbjct: 61 EVMLISESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKTGTYTMPGGVGPIEGDTSVL- 119
Query: 125 VHKHLEELAKQAGLKDNQLLLKV 147
L E L+ N+ LKV
Sbjct: 120 --TRLNEDPPPDDLQLNRKQLKV 140
>gi|292397782|ref|YP_003517848.1| BRO-H [Lymantria xylina MNPV]
gi|291065499|gb|ADD73817.1| BRO-H [Lymantria xylina MNPV]
Length = 415
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F ++ +R ++ +Q + FVAKDVA++L Y N N+A++ H K
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLGDEQPVKFVAKDVASSLKYGNCNDAVSKHVDKKYKYTY 60
Query: 57 LKTEGG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ ++++ V +L++KS LP A + + W+ EEV+
Sbjct: 61 SEHGSQIASLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVI 120
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
P + TG Y P ++ T V K ++ A L+ K + +
Sbjct: 121 PQVLCTGKYD---PAIKHQQEETKRMVDKLIKVFADHTATLQAALVKKEKFVEFVVESNN 177
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLN 187
+ K + + D +T++ LN
Sbjct: 178 KQIEAKNKLIEAKDQ----HVTRVMTDLN 202
>gi|229100208|ref|ZP_04231108.1| Phage antirepressor protein [Bacillus cereus Rock3-29]
gi|228683250|gb|EEL37228.1| Phage antirepressor protein [Bacillus cereus Rock3-29]
Length = 260
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 31/258 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
M+ + F + ++ + F ++ A +LGY +N + + +
Sbjct: 1 MNQLRIFNHQEFGALEVIQLNGKEMFNLENAAWSLGYVKANSTGKKYLRHERIAKVIDKC 60
Query: 60 ---EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ ISE D+Y L+ ++ A++F +WV EVLP++RK G+Y + +A
Sbjct: 61 DIQVCVHHGHKYISESDLYELIFEAETQKAKEFRKWVTSEVLPSIRKHGAYMTDQALEQA 120
Query: 117 -TSASTVLRVHKHLEE--------------------LAKQAGLKDNQLLLKVNRGVTKIT 155
T+ ++ + +L+E A+ + N + +K + +
Sbjct: 121 VTNPDFMIGLLTNLKEEKAKRVEAERTILQQQPLVTFAEAVQVSTNLITVKQLANLMRQK 180
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
G+D + + + + G N P + +L + + G +
Sbjct: 181 GIDTGQNRLFEWFRENGYLC----KKRGSLHNTPTQYSMDLQLFESQEYVRTNSQGEFVT 236
Query: 216 --TPKGEERGGKMCDVPM 231
T K +G
Sbjct: 237 SFTTKVTGKGQLYFINKF 254
>gi|328910536|gb|AEB62132.1| phage antirepressor [Bacillus amyloliquefaciens LL3]
Length = 256
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 102/257 (39%), Gaps = 25/257 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA--INAHCKGVAKRYPLK 58
M+ + F+ E ++ ++ DQ I F A+ VA LG ++ + V P
Sbjct: 1 MNNLQTFKNEIFEVAAKIENDQ-ILFDAEQVARNLGLTTVAKSGNVTIRWSRVNTYLPDN 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-- 116
++K I EP VY+L +++ A++F+ W+ EV+PT+RKTG Y +
Sbjct: 60 FPE-VEKGDFIPEPLVYKLAFRASNQIAEQFQDWLAFEVIPTIRKTGGYVANDEQFIQTY 118
Query: 117 -------------TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
T+ + +K +E + +A + + + V ++ + Q +
Sbjct: 119 LSNADENTKLFFKTTLHALKEQNKQIESMKPKALFAEAVEASESSVLVGELAKIIQQNGV 178
Query: 164 DI--KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYR--PTPK 218
I L D I + GE N P QR+ L +K+ ++ G R TPK
Sbjct: 179 KIGPNKLFQWLRDNGYLIRKTGESFNLPTQRSMDLGLFEIKKRT-MNNPDGSIRTTRTPK 237
Query: 219 GEERGGKMCDVPMQHVE 235
+G E
Sbjct: 238 VTGKGQIYFVNKFISSE 254
>gi|308172436|ref|YP_003919141.1| phage antirepressor [Bacillus amyloliquefaciens DSM 7]
gi|307605300|emb|CBI41671.1| phage antirepressor [Staphylococcus prophage phiPV83] [Bacillus
amyloliquefaciens DSM 7]
Length = 256
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 25/257 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA--INAHCKGVAKRYPLK 58
M+ + F+ E ++ ++ DQ I F A+ VA LG ++ + V P
Sbjct: 1 MNNLQTFKNEIFEVAAKIENDQ-ILFDAEQVARNLGLTTVAKSGNVTIRWSRVNTYLPDN 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-- 116
++K I EP VY+L +++ A++F+ W+ EV+PT+RKTG Y +
Sbjct: 60 FPE-VEKGDFIPEPLVYKLAFRASNQIAEQFQDWLAFEVIPTIRKTGGYVANDEQFIQTY 118
Query: 117 -------------TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
T+ + +K +E + +A ++ + + V ++ + Q +
Sbjct: 119 LSNADENTKLFFKTTLHALKEQNKQIESMKPKALFAESVEASESSVLVGELAKIIQQNGV 178
Query: 164 DI--KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGGYR--PTPK 218
I L D I + GE N P QR+ L +K+ ++ G R TPK
Sbjct: 179 KIGPNKLFQWLRDNGYLIRKTGESFNLPTQRSMDLGLFEIKKRT-MNNPDGSIRTTRTPK 237
Query: 219 GEERGGKMCDVPMQHVE 235
+G E
Sbjct: 238 VTGKGQIYFVNKFISSE 254
>gi|164519328|ref|YP_001649115.1| BRO-H [Helicoverpa armigera granulovirus]
gi|163869514|gb|ABY47824.1| BRO-H [Helicoverpa armigera granulovirus]
Length = 463
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK---------- 65
T ++ D + VA +LGY+ AI H K ++ + +G + +
Sbjct: 20 TQIEMD-KFLYAGHGVAESLGYKKPRNAILTHVKPEWRKTWAEIKGALNQGFLVTSSNET 78
Query: 66 ---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + ++
Sbjct: 79 QLPANWQPNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSEAASKS 138
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGVDQLEAMDIKHLPSSDNDE 175
T T++ K L E A +++ QL L +++ V K + +L+ + + + E
Sbjct: 139 T---TIVHYDKKLAE----AQIENLQLKLDLSQTVAKSENKIAELQRNYERQIAEYKDRE 191
Query: 176 YLTI---TQIGERLNPPQRARFLNKLLLKRGLQVSK 208
Y + + N +N LL + ++ ++
Sbjct: 192 YKHAIAMKDLLMKANATMVQFGVNTLLAEDNIKQNE 227
>gi|28557094|dbj|BAC57553.1| antirepressor protein [Clostridium sordellii]
Length = 187
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-----------KRYPLK 58
E +R +V + +F A +A LGY N ++A+ HC+ K
Sbjct: 8 EFGDLRLVVV-NGKEYFDAIPIAKTLGYSNPHDALMRHCQKEGVVFHEVGVETGKYKSGD 66
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ I E ++YRL++KS L +KFE WVFEEVLPT+RK G Y E
Sbjct: 67 AIMQFVSKKFIDEGNLYRLILKSKLKKVRKFEMWVFEEVLPTIRKHGEYINEDIIDEVLD 126
Query: 119 ASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
+LR + + L + + + ++ L ++ VD
Sbjct: 127 DPILLRKLTERLSDEKSKRYEAERKVNLLKGNIISNKPYVD 167
>gi|215401532|ref|YP_002332836.1| BRO-2 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484073|gb|ACI47506.1| BRO-2 [Spodoptera litura nucleopolyhedrovirus II]
Length = 505
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 82/226 (36%), Gaps = 38/226 (16%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE---------------- 60
+ + + VA LGY+ A+ H K ++ +
Sbjct: 41 VKVDNDQFMYKGHAVANILGYKKPRNALAMHVKPNWRKTWEEIHDTAKHRLQCKSALNQG 100
Query: 61 ----------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
ISE VY L+++S LP+A++F++W+FEEVLP LRKTG+YSV
Sbjct: 101 PHLAQAQLPVNWHPHTVFISEAGVYALIMRSKLPAAEEFQQWLFEEVLPELRKTGTYSVN 160
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
T A +E L + L N++ + + + +
Sbjct: 161 NDPRLVTVAEYKKLADAQIEALQLKLELSKNEIAVSEMKRNYE---------HQMNEYKE 211
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
L + + + N +N LL K ++ +G R T
Sbjct: 212 RQYKMQLVMKDMATQANMSMTQFAVNALLAKDNIE---ENGQLRQT 254
>gi|9635310|ref|NP_059208.1| ORF60 [Xestia c-nigrum granulovirus]
gi|6175704|gb|AAF05174.1|AF162221_60 ORF60 [Xestia c-nigrum granulovirus]
Length = 484
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAK-----------RYPLKTE--------GGI 63
++ +A ++GY N +AI H + + R PL T
Sbjct: 26 KFLYMGHSIAKSVGYANPQKAIRDHVRPEWRKTWSEIVDGTNRSPLVTSFNDSHLPANWQ 85
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + A++++ ++
Sbjct: 86 PNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSE---AASTSTEIV 142
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY------- 176
K L E A + +L L+++ T I D ++K EY
Sbjct: 143 NYDKKLAE----AQMDAMRLKLELSEANTTIAKYDT-TISEMKRNYEHQMGEYKEREYRM 197
Query: 177 -LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ 232
LT+ + N +N LL K ++ T +M + P +
Sbjct: 198 QLTMKDMANAANTTMTQFAVNALLAKDNIE-ENERMRQTLTNVSGRVVPEMTEQPHK 253
>gi|9630999|ref|NP_047669.1| Ld-bro-b [Lymantria dispar MNPV]
gi|3822267|gb|AAC70218.1| Ld-bro-b [Lymantria dispar MNPV]
Length = 323
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 32/210 (15%)
Query: 1 MS--TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--- 53
MS I F+F E +R ++++DQ+I FVAKDVA +L Y + +A+ + K
Sbjct: 1 MSRVKIGQFKFGEEEFTLRYVLERDQSIKFVAKDVAASLKYVDCKQAVRINVDDKYKFTF 60
Query: 54 ----------RYPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ +G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 EQGCVPHTLASDSVAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHK---HLEELAKQAGLKDNQLLLKVNRGVTKITG 156
+ TG Y AP ++ ++ ++++ L E + L++ N +
Sbjct: 121 QVLCTGKY---APAVKMDTSGALVKIDDLTAKLTEANANLMEANKSLIVFANEMI----- 172
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
V + +A + + + + +L
Sbjct: 173 VARRDAETARQDCEAARQDCEAARRETAQL 202
>gi|13751087|emb|CAC37063.1| Bro-II protein [Bombyx mori NPV]
Length = 320
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAK-- 53
M+ + F+F ++ +R ++++ + FVAKD+A++L Y N +AIN H K
Sbjct: 1 MAQVKIGEFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAINRHVDDKYKYT 60
Query: 54 ------RYPLKTEGG----------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
R P +I++ V +L++KS LP A + + W+ EEV
Sbjct: 61 YNEHGARIPHHAPDTVVKQGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEV 120
Query: 98 LPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+P + TG Y AP + + + + ++ ++L N L + NR + I
Sbjct: 121 IPQVLCTGKY---APAVEMDTNNDIAKIDDLTQKLTV-----ANADLAEANRSL--ILFA 170
Query: 158 DQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+++ + + + + + +L
Sbjct: 171 NEM--IVARRDAETARKDCENARRETAQL 197
>gi|237643633|ref|YP_002884323.1| BRO-C [Bombyx mandarina nucleopolyhedrovirus]
gi|229358179|gb|ACQ57274.1| BRO-C [Bombyx mandarina nucleopolyhedrovirus]
Length = 325
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 32/210 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------- 49
M+ + F+F ++ +R ++D +Q + FVAKD+A +L Y N +A+ H
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYVNYEKAVRVHVDVKYKSLF 60
Query: 50 GVAKRYPLKTEGG----------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
A + T +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 ENADQISHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL-AKQAGLKDNQ--LLLKVNRGVTKITG 156
+ TG Y AP + + + ++ ++L A L + L+L N +
Sbjct: 121 QVLCTGKY---APAVEMDTNDVIAKIDDLTQKLTVANADLAEANRSLILFANEMI----- 172
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
V + +A + + + + +L
Sbjct: 173 VARRDAETARQDCENARKDCENARRETAQL 202
>gi|20069910|ref|NP_613114.1| BRO-c [Mamestra configurata NPV-A]
gi|20043304|gb|AAM09139.1| BRO-c [Mamestra configurata NPV-A]
Length = 486
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 38/226 (16%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK------- 65
+I + + + + VA LGY A+ H K ++ K +G + +
Sbjct: 16 EIWIVEIEKEKFMYGGHGVAQFLGYVKPRNALQQHVKPAWRKNWEKIKGALNQGPLMTSL 75
Query: 66 ------------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
ISE VY L+++S LP+A +F W+FEEVLP LRKTG YSV+
Sbjct: 76 NQDNIPVNWQPNTVFISEAGVYALIMRSKLPAADEFRSWLFEEVLPELRKTGKYSVQ-DN 134
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA------MDIKH 167
++ +S++ ++ K L E A ++ +L LK++ T I D A ++K
Sbjct: 135 VKQSSSTKIVNYDKKLAE----AQMEAMKLKLKLSEAHTTIAKCDTTIANFNTTISEMKR 190
Query: 168 LPSSDNDEY--------LTITQIGERLNPPQRARFLNKLLLKRGLQ 205
E L + + N +N LL K ++
Sbjct: 191 NYEHQMAECKDREYKMKLQMQDLANAANMTMTQFAVNALLAKDNIE 236
>gi|22549460|ref|NP_689233.1| BRO-B [Mamestra configurata NPV-B]
gi|22476639|gb|AAM95045.1| BRO-B [Mamestra configurata NPV-B]
Length = 348
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 29/205 (14%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRY-----------PLKTEGG--------I 63
+ VA +L Y+ AI H K ++ PL T
Sbjct: 26 KFMYAGHGVAESLSYKKPRNAILTHVKPEWRKTWAEIKEALNQGPLTTSSNETPVPANWQ 85
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
ISE V+ L+++S LP+A++F+RW+FEEVLP LRKTG Y + +AS V+
Sbjct: 86 PNTVFISEAGVWALIMRSKLPAAEEFQRWLFEEVLPELRKTGKYDMR------KAASEVV 139
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
K L E A + +L L +++ +I +++ I + + + +
Sbjct: 140 NYDKKLAE----AQMDAMRLKLDLSQTENRIAELERNYERQIAEYKDREYKNAIAMKDLL 195
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSK 208
+ N +N LL + ++ ++
Sbjct: 196 MKANATMIQFGVNTLLAEDNIKQNE 220
>gi|261881064|ref|ZP_06007491.1| bro family toxin-antitoxin system [Prevotella bergensis DSM 17361]
gi|270332182|gb|EFA42968.1| bro family toxin-antitoxin system [Prevotella bergensis DSM 17361]
Length = 123
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 4 ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
IT F + IRT + F DV +L + ++ I GV R+P+ G
Sbjct: 5 ITIFNNPQFGDIRTAGTP-EAPLFCLADVCKSLELQ-ASAVIRQLDDGVITRHPISDSLG 62
Query: 63 IQKV-RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
Q+V +SE +Y +++ S P A+ F +W+ EV+ ++KTG YS+
Sbjct: 63 RQQVANFVSEDGLYDVILDSRKPEAKVFHKWITSEVIAPIKKTGGYSL 110
>gi|295402354|ref|ZP_06812309.1| prophage antirepressor [Geobacillus thermoglucosidasius C56-YS93]
gi|294975627|gb|EFG51250.1| prophage antirepressor [Geobacillus thermoglucosidasius C56-YS93]
Length = 206
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+TI E+ ++IR I + W VAKDVA+ALGY ++ + + + L T
Sbjct: 1 MNTIRIEEWNGHQIRFIEKLPGDWWAVAKDVASALGYNHTPSMVRMLDQDEKGVHILHTP 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG---SYSVEAPKLRAT 117
GG QK+ IISE +Y + S P A+ F++WV + + LR+ + V +
Sbjct: 61 GGNQKMTIISETGIYEAIWNSRKPEAKDFKKWVKQT-IKALRQASGLEGFQVFRMLDKDH 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ ++ + L + + +K N + N+ V+ G ++ + D +
Sbjct: 120 QKEMMRKLRESLNQPGRVDYIKANTI---ANKAVSAKYGYPKMVKKN-----EMTPDMLI 171
Query: 178 TITQIGERL 186
QI E
Sbjct: 172 DRQQILEDT 180
>gi|90592840|ref|YP_529793.1| BRO-D [Agrotis segetum nucleopolyhedrovirus]
gi|71559290|gb|AAZ38289.1| BRO-D [Agrotis segetum nucleopolyhedrovirus]
Length = 336
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 102/255 (40%), Gaps = 50/255 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F + ++R +VD D + FV KD+A L Y + +AI+ H K K G
Sbjct: 6 IGVFKFGEDEFELRYVVDNDMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCVFEKMGG 65
Query: 62 GI---------------------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVF 94
+I++ V +L++KS LP A + + W+
Sbjct: 66 QNDAPPCFDDNEGVRGEVAIKKGNPLYLQPHTILITKSGVIQLIMKSKLPYAVELQEWLL 125
Query: 95 EEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDN--QLLLKVNRGVT 152
EEV+P + TG Y P + + +TV +H+ + L+ + +++K ++ +
Sbjct: 126 EEVIPQVLCTGKY---QPAVDNGNGATVSMLHEISQSLSTIQRDNEQLKTVIVKKDQQIE 182
Query: 153 KITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ T I + + N Y Q ++ + ++ L+ K + +S
Sbjct: 183 QTT-------RMINRVMADMNRMYTGFQQTMQK-----KDEQVSSLVEK----MVDLSDR 226
Query: 213 YRPTPKGEERGGKMC 227
P E++ +C
Sbjct: 227 AVEYPSNEKKLPILC 241
>gi|126417618|gb|ABO13904.1| BRO-c [Bombyx mori NPV]
Length = 325
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------- 49
M+ + F+F ++ +R ++D +Q + FVAKD+A +L Y N +A+ H
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLDTEQPVKFVAKDIAISLKYVNYEKAVRVHVDVKYKSLF 60
Query: 50 ------GVAKRYPLKTEGG----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G + +G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 ENADQIGHHTSNSVVKKGDPLYLHPHTVLITKSGVIQLIMKSKLPYAIELQEWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEEL-AKQAGLKDNQ--LLLKVNRGVTKITG 156
+ TG Y AP + + + ++ ++L A L + L+L N +
Sbjct: 121 QVLCTGKY---APAVEMDTNDVIAKIGDLTQKLTVANADLAEANRSLILFANEMI----- 172
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
V + +A + + + + +L
Sbjct: 173 VARRDAETARQDCENARKDCENARRETAQL 202
>gi|326791875|ref|YP_004309696.1| prophage antirepressor [Clostridium lentocellum DSM 5427]
gi|326542639|gb|ADZ84498.1| prophage antirepressor [Clostridium lentocellum DSM 5427]
Length = 249
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F E ++ + + + F K VA LG +N N+ I+ + +
Sbjct: 1 MQELMIF--EGKQVE-VFEFQGKVLFNPKHVAECLGIKNVNDNISRMNENQVIKLKNSDI 57
Query: 61 G-------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G ++E VY+L+ KS A++F+ WV + VL ++RKTG+YS
Sbjct: 58 GKTDIRKLNNAGENFLTESGVYKLIFKSHKEEAERFQDWVTDVVLTSIRKTGTYSTGQKP 117
Query: 114 LRATSASTV--LRVHKHLEEL----AKQAGLKDNQLLLKV 147
A + + +H +E+ A+ A LKDN L V
Sbjct: 118 TSAMEELRMHYRALEEHSQEIQEVKAEVADLKDNMPLFNV 157
>gi|86136646|ref|ZP_01055225.1| antirepressor protein ant [Roseobacter sp. MED193]
gi|85827520|gb|EAQ47716.1| antirepressor protein ant [Roseobacter sp. MED193]
Length = 152
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 17/143 (11%)
Query: 17 IVDKDQNIWFVAKDVATAL-------GYENSNEAINAHCKGVAKRYPLKT-----EGGIQ 64
++D D WFVA DV AL G N A + T E
Sbjct: 1 MIDIDGEPWFVATDVCRALSLQIQPTGKVNVTAATRNLAGDERGLLSIHTPIPTKESHTT 60
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
K+ +SE +Y+L+++ F+ WV VLP +RK G Y + K+ S
Sbjct: 61 KMVCLSEGGLYKLIMRCDKAEVHDFQEWVTRVVLPAIRKDGGYVMGEEKVVTCELSEDEL 120
Query: 125 VHKHLEE-----LAKQAGLKDNQ 142
V + + + A ++DNQ
Sbjct: 121 VARAIARGLGSTIKLSATIEDNQ 143
>gi|292397816|ref|YP_003517882.1| BRO-J [Lymantria xylina MNPV]
gi|291065533|gb|ADD73851.1| BRO-J [Lymantria xylina MNPV]
Length = 325
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F ++ +R ++ +Q + FVAKDVA++L Y N N+A++ H K
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLGDEQPVKFVAKDVASSLKYGNCNDAVSKHVDKKYKYTY 60
Query: 57 LKTEGG------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ ++++ V +L++KS LP A + + W+ EEV+
Sbjct: 61 SEHGSQIASLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVI 120
Query: 99 PTLRKTGSYSVEAPKLRATSA---STVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
P + TG Y+ T + +++ + +L E + + Q+ + +R
Sbjct: 121 PQVLCTGKYAPAVKINTNTVETLSTALVQANANLVEFTRGLIAANQQINVLADR 174
>gi|255652574|ref|ZP_05399476.1| putative phage-related regulatory protein [Clostridium difficile
QCD-37x79]
Length = 237
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-VAKRYPLKT 59
M+ + F E ++ + + + I F K VA L + N +I V K
Sbjct: 1 MNNLMVF--EGKEVE-VFEFEGKILFNPKHVAECLEISDVNSSIRKFNDNQVVKLTNSDM 57
Query: 60 EGGIQKV------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+ + ++E VY+L+ KS A+KF+ WV +EVLP++RKTG+Y++
Sbjct: 58 HNMHIRKLNNAGEKFLTESGVYKLIFKSKKKEAEKFQDWVMDEVLPSIRKTGTYNINQNY 117
Query: 114 LRATSASTVLRVHKHLEE 131
L ++ K + +
Sbjct: 118 LLEMIQGGIMGGLKSVAQ 135
>gi|15426320|ref|NP_203615.1| bro-a [Helicoverpa armigera NPV]
gi|15384396|gb|AAK96307.1|AF303045_49 bro-a [Helicoverpa armigera NPV]
Length = 357
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCK---------- 49
MS +T +F ++ T VD + W VA A AL Y N N AI H
Sbjct: 1 MS-VTKIKFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEF 59
Query: 50 -----GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
G+ K + I+ V+ L+ S +P A++F+ W ++LP+L +
Sbjct: 60 KSDRVGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQL 160
G Y + A A A + VH E +KD +++ ++ + ++ ++
Sbjct: 120 GEYKM-ARDAPADIAHGMNAVHVATNEGVAAPWMKDLHELRDAVVQKDKIIQAMSYENKE 178
Query: 161 EAMDIK----HLPSSDNDEYLTITQIGERLNPPQRARF 194
++ ++ L S+++ + + E N +A
Sbjct: 179 LSLSLRTSNEKLQSANDKLMYFASALVESNNGLMKANE 216
>gi|33331742|gb|AAQ11050.1| BRO-C [Mamestra configurata NPV-A]
Length = 486
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 46/249 (18%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK------- 65
+I + + + + VA LGY A+ H K ++ K +G + +
Sbjct: 16 EIWIVEIEKEKFMYGGHGVAQFLGYVKPRNALQQHVKPAWRKNWEKIKGALNQGPLMTSL 75
Query: 66 ------------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
ISE VY L+++S LP+A +F W+FEEVLP LRKTG YSV+
Sbjct: 76 NQDNIPVNWQPNTVFISEAGVYALIMRSKLPAADEFRSWLFEEVLPELRKTGKYSVQ-DN 134
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD----------QLEAM 163
++ +S++ ++ + L E A ++ +L LK++ T I D
Sbjct: 135 VKQSSSTEIVNYDRKLAE----AQMEAMKLKLKLSEAHTTIAKCDTTIANFNTTISEMKR 190
Query: 164 DIKHLPSSDNDEYLTITQIGERL----NPPQRARFLNKLLLKRGL----QVS----KVSG 211
+ +H + D + + + N +N LL K + Q+ VSG
Sbjct: 191 NYEHQMAECKDREYKMQLQMKDMANAANTTMTQFAVNALLAKDNIEENQQMRQTLTNVSG 250
Query: 212 GYRPTPKGE 220
P K +
Sbjct: 251 RVVPEMKEQ 259
>gi|12597545|ref|NP_075129.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483811|gb|AAG53803.1|AF271059_60 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 527
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCK---------- 49
MS +T +F ++ T VD + W VA A AL Y N N AI H
Sbjct: 1 MS-LTKIQFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEF 59
Query: 50 -----GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
G+ K + I+ V+ L+ S +P A++F+ W ++LP+L +
Sbjct: 60 KSDRVGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
G Y + A A A + VH + A+ +KD L ++ V + + Q + +
Sbjct: 120 GEYKM-ARDAPADIAHGMNAVHVATNDGAEAPWMKD---LHELRDAVVQKDKIIQAMSYE 175
Query: 165 IKHL 168
K L
Sbjct: 176 NKQL 179
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA------- 52
M+ + F +I ++ D +W +A A L Y N+AI H +
Sbjct: 183 MAVVKVHFNDRELEIISVKDDAGKLWMLANPFALVLNYGRPNDAIRNHVTDINVRNYEYF 242
Query: 53 --KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+R+ + + I+ ++ L+ S +P AQ+F W+ ++LP L G Y +
Sbjct: 243 KARRFNVDDVTLHPMSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDMA 302
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKD 140
A + A+ + VH E + ++D
Sbjct: 303 ADAPK-EIANGMNAVHAITNEGKEAPWMED 331
>gi|302876390|ref|YP_003845023.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579247|gb|ADL53259.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 231
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F E ++ + + + F K VA L +N N++I + +
Sbjct: 1 MNELMIF--EEKQVE-VFEWNGQALFNTKHVAECLDIKNVNDSIRNFNEKQVIKLTNSDI 57
Query: 61 G-------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
G ++E VY+L+ KS A++F+ WV + VLP++RKTGSY+ +
Sbjct: 58 GIADFRKLNNAGENFLTESGVYKLIFKSRKEEAERFQDWVTDVVLPSIRKTGSYNNQLAS 117
Query: 114 LRATSASTVLRVHKHLEELAKQAGLK 139
+ ++ + + + K
Sbjct: 118 SNDIAILLESKLDAIVNDRMSKLEEK 143
>gi|209401115|ref|YP_002273984.1| baculovirus repeated ORF c [Helicoverpa armigera NPV NNg1]
gi|209364367|dbj|BAG74626.1| baculovirus repeated ORF c [Helicoverpa armigera NPV NNg1]
Length = 352
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
M+ I F ++ +I D + +W +A A L Y N+N A+ H K +
Sbjct: 1 MAVIKVQFANSELEVISIKDDNGELWMLANPFARILEYSNANRAVRVHVLEKNQCILEKI 60
Query: 58 KTEGG-------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ + + I+ ++ L+ S +P A++F W+ ++LP L G Y +
Sbjct: 61 RPDHCGLDDVTLHPLSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDDGKYDM- 119
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAMDIK 166
A A + VH + A +KD +++ ++ + I+ ++ ++ ++
Sbjct: 120 ATDAPVGIAMGMNAVHAIANDGADAPWMKDLHELRTAVVQKDKIIEAISYENKELSLSLR 179
Query: 167 ----HLPSSDNDEYLTITQIGERLNPPQRARF 194
L +++ + + E N +A
Sbjct: 180 TSNEKLQGANDKLMYFASALVESNNGLMKANE 211
>gi|9630839|ref|NP_047436.1| BRO-a [Bombyx mori NPV]
gi|3745858|gb|AAC63705.1| BRO-a [Bombyx mori NPV]
Length = 317
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 29/216 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQ-NIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
M+ + F+F ++ +R ++++ + FVAKD+A++L Y N +A+ + K
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLEQGNLQVKFVAKDIASSLKYVNCKQAVIVNVDKKYKTT 60
Query: 56 PLKTEGGI------------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
++ +I++ V +L++KS LP A + + W+ EEV
Sbjct: 61 YSESGSIPYTPAPDNVVKQGDPLYLQPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEV 120
Query: 98 LPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+P + TG Y+ T+ + ++K L ++ + +++ N VT G+
Sbjct: 121 IPQVLCTGKYA--PAVKMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGL 178
Query: 158 DQLEAM--DIKHLPSSDNDEYLTITQ--IGERLNPP 189
Q M + + + + I Q I + NP
Sbjct: 179 VQANTMLNEARRETAQLANRMADIAQDVIAKPNNPQ 214
>gi|209170903|ref|YP_002268049.1| BRO-A [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436494|gb|ACI28721.1| BRO-A [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 493
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 38/215 (17%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-------------------PLK 58
V+KD + +A LGY A+ H K +
Sbjct: 22 VEKD-KFMYGGHGIAEFLGYAKPWNALKQHVKPQWSKKWEEIMGTLSQGTLLTSFDETQL 80
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
I+E VY L+++S LP+A++F+RW+FEEVLP LR+TG Y++E
Sbjct: 81 PPNWQPNTVFITEAGVYALIMRSKLPAAEEFQRWLFEEVLPELRRTGKYNIE-----DKF 135
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY-- 176
++ + K L + A ++ QL L++++ T + + ++K EY
Sbjct: 136 SADIENYDKKLAD----AQIESLQLKLELSQANTTVAKYET-TISEMKRNYEQQISEYKE 190
Query: 177 ------LTITQIGERLNPPQRARFLNKLLLKRGLQ 205
L + + N +N LL K ++
Sbjct: 191 REYKMQLQMKDLATAANMTMTQFAVNALLAKDNIE 225
>gi|109287897|ref|YP_654591.1| hypothetical protein MIV019R [Invertebrate iridescent virus 3]
gi|123808679|sp|Q197E1|VF201_IIV3 RecName: Full=Putative Bro-N domain-containing protein 019R
gi|106073520|gb|ABF82049.1| hypothetical protein MIV019R [Aedes taeniorhynchus iridescent
virus]
Length = 406
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 44/211 (20%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN------------IWFVAKDVATALGYENSNEAINAHC 48
M+ + + ++ T V D +F KDV + L Y++ +A+
Sbjct: 1 MNALI--NLKQSREYTTVTIDGQNHHIKLAGTMDDPYFCGKDVCSILRYKDVKQALQNKV 58
Query: 49 KGVAKRY---------------PLKTEGGIQ--------KVRIISEPDVYRLLVKSTLPS 85
K K+ T G K I+EP +Y L++ S P
Sbjct: 59 KPKNKKMLSVLVKQDHNAVGVQTTSTRLGSNSPLTYNEGKAIYINEPGLYALIMHSNAPF 118
Query: 86 AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL 145
A++F+ V+E++LP++RK GSY +E ++ T A L + + + A +A +K + +
Sbjct: 119 AEEFQDLVYEQILPSIRKYGSYQLE---MQLTQAMEQLSIKERDVQEAHEARIKAERKAV 175
Query: 146 KVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+V++ + +I ++ ++ + + +Y
Sbjct: 176 RVDKFMRRIA----IKERKLEWIYIATTQQY 202
>gi|292397819|ref|YP_003517885.1| BRO-K [Lymantria xylina MNPV]
gi|291065536|gb|ADD73854.1| BRO-K [Lymantria xylina MNPV]
Length = 326
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F + +R ++++D+ + FVAKDVA +L YEN+ E++ H K E
Sbjct: 7 IGQFKFGEDEFTLRYVLERDRQVKFVAKDVAVSLSYENTTESVRKHVDAKYKT---TYEQ 63
Query: 62 GIQ--------------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
G Q +I++ V +L++KS LP A + + W+ EEV+P +
Sbjct: 64 GEQFTLPASNSVVKRGDPLYLQANTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQV 123
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
TG Y A + + ++ + ++LA + +++L V G+
Sbjct: 124 LCTGKYR-PAIAEESILRNEIVAKTEENKQLATSLIEANGKIILFAGALVEANAGL 178
>gi|116326102|ref|YP_803427.1| baculovirus repeated ORF-d [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180840|gb|ABI13817.1| baculovirus repeated ORF-d [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 340
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------------R 54
F ++ T+ D + W VA A AL Y N+AI C+ V+K R
Sbjct: 8 FVNGPLEVFTVADDKRENWMVANPFAEALNYSRPNKAI---CEKVSKENVKTLEELRSHR 64
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y++ A
Sbjct: 65 NGAIASSLHPQTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNM-AVDA 123
Query: 115 RATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGV 157
A A + VH + + K +KD Q++++ N + +T +
Sbjct: 124 PAEIAEGMNAVHAAVNDGRKAPWIKDMDAYKQIIVEKNEKIETLTTM 170
>gi|229080925|ref|ZP_04213440.1| Antirepressor, phage associated [Bacillus cereus Rock4-2]
gi|228702421|gb|EEL54892.1| Antirepressor, phage associated [Bacillus cereus Rock4-2]
Length = 258
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/244 (18%), Positives = 92/244 (37%), Gaps = 22/244 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F + ++ ++ F ++VA +LGY + K ++ K +
Sbjct: 1 MKQLQVFNHQEFGALEVIHLNRKEMFNLENVAWSLGYTKVAKGKTYLRKDRIEKVIQKAD 60
Query: 61 GG---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA- 116
I+E +Y L+ +S A++F +WV EVLP++RK G+Y + +A
Sbjct: 61 ISVIVHDGQPYITEDGLYELIFESETQKAKEFRKWVTSEVLPSIRKHGAYMTDQVLEQAV 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T+ V+ + L+E ++ Q++ + V + + + + + +
Sbjct: 121 TNPDFVIGLLTKLKEEKERLAAAQQQIVQQQPLVVFAEACMQSEQTLKVSEVAKLATKQG 180
Query: 177 LTITQ-------------IGERLNPPQRARFLNKLLLKRGLQVSKVSGGY-----RPTPK 218
+ I Q P Q A + +G++ + + TPK
Sbjct: 181 VKIGQRQLFAKLREWELMFKRSTEPTQLAVEKGYFEIAQGVKQKRNGEAFTWTTTYVTPK 240
Query: 219 GEER 222
G+
Sbjct: 241 GQAY 244
>gi|9635381|ref|NP_059279.1| ORF131 [Xestia c-nigrum granulovirus]
gi|6175775|gb|AAF05245.1|AF162221_131 ORF131 [Xestia c-nigrum granulovirus]
Length = 442
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAK-----------RYPLKTE--------GGI 63
++ +A ++GY N +AI H + + R PL T
Sbjct: 5 KFLYMGHSIAKSVGYANPQKAIRDHVRPEWRKTWSEIVDGTNRSPLVTSFNDSHLPANWQ 64
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
I+E V+ L++KS LP+A+KF++W+FEEVLP LR+TG Y + A++++ ++
Sbjct: 65 PNTVFITEAGVWALIIKSKLPAAEKFQKWLFEEVLPELRRTGKYDMSE---AASTSTEIV 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGVDQLEAMDIKHLPSSDNDEYLTI--- 179
K L E A +++ QL L +++ V K + +LE + + + EY
Sbjct: 122 NYDKKLAE----AQIENLQLKLDLSQTVAKSENKIAELERNYERQIAEYKDREYKHAIAM 177
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSK 208
+ + N +N LL + ++ ++
Sbjct: 178 KDLLMKANATMVQFGVNTLLAEDNIKQNE 206
>gi|17987946|ref|NP_540580.1| antirepressor protein ANT [Brucella melitensis bv. 1 str. 16M]
gi|23501165|ref|NP_697292.1| BRO family protein [Brucella suis 1330]
gi|148560310|ref|YP_001258304.1| BRO family protein [Brucella ovis ATCC 25840]
gi|161618238|ref|YP_001592125.1| hypothetical protein BCAN_A0262 [Brucella canis ATCC 23365]
gi|225626789|ref|ZP_03784828.1| BRO family protein [Brucella ceti str. Cudo]
gi|225851809|ref|YP_002732042.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|254705431|ref|ZP_05167259.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|254707992|ref|ZP_05169820.1| BRO family protein [Brucella pinnipedialis M163/99/10]
gi|254709427|ref|ZP_05171238.1| BRO family protein [Brucella pinnipedialis B2/94]
gi|256030921|ref|ZP_05444535.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|256046072|ref|ZP_05448944.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112784|ref|ZP_05453705.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|256158961|ref|ZP_05456804.1| BRO family protein [Brucella ceti M490/95/1]
gi|256254326|ref|ZP_05459862.1| BRO family protein [Brucella ceti B1/94]
gi|256264674|ref|ZP_05467206.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|256368718|ref|YP_003106224.1| BRO family protein [Brucella microti CCM 4915]
gi|260169822|ref|ZP_05756633.1| BRO family protein [Brucella sp. F5/99]
gi|260563351|ref|ZP_05833837.1| BRO family domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260567114|ref|ZP_05837584.1| BRO family domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261221483|ref|ZP_05935764.1| BRO family protein [Brucella ceti B1/94]
gi|261315487|ref|ZP_05954684.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316945|ref|ZP_05956142.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261756148|ref|ZP_05999857.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|261759367|ref|ZP_06003076.1| BRO family protein [Brucella sp. F5/99]
gi|265987982|ref|ZP_06100539.1| BRO family protein [Brucella pinnipedialis M292/94/1]
gi|265992486|ref|ZP_06105043.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265994227|ref|ZP_06106784.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|265997444|ref|ZP_06110001.1| BRO family [Brucella ceti M490/95/1]
gi|17983685|gb|AAL52844.1| antirepressor protein ant [Brucella melitensis bv. 1 str. 16M]
gi|23347041|gb|AAN29207.1| BRO family protein [Brucella suis 1330]
gi|148371567|gb|ABQ61546.1| BRO family protein [Brucella ovis ATCC 25840]
gi|161335049|gb|ABX61354.1| Uncharacterized protein HI1418 [Brucella canis ATCC 23365]
gi|225618446|gb|EEH15489.1| BRO family protein [Brucella ceti str. Cudo]
gi|225640174|gb|ACO00088.1| BRO family protein [Brucella melitensis ATCC 23457]
gi|255998876|gb|ACU47275.1| BRO family protein [Brucella microti CCM 4915]
gi|260153367|gb|EEW88459.1| BRO family domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|260156632|gb|EEW91712.1| BRO family domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260920067|gb|EEX86720.1| BRO family protein [Brucella ceti B1/94]
gi|261296168|gb|EEX99664.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261304513|gb|EEY08010.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261739351|gb|EEY27347.1| BRO family protein [Brucella sp. F5/99]
gi|261745901|gb|EEY33827.1| BRO family protein [Brucella suis bv. 3 str. 686]
gi|262551912|gb|EEZ07902.1| BRO family [Brucella ceti M490/95/1]
gi|262765208|gb|EEZ11129.1| BRO family protein [Brucella melitensis bv. 3 str. Ether]
gi|263003552|gb|EEZ15845.1| BRO family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263095082|gb|EEZ18751.1| BRO family protein [Brucella melitensis bv. 2 str. 63/9]
gi|264660179|gb|EEZ30440.1| BRO family protein [Brucella pinnipedialis M292/94/1]
Length = 140
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ + + WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVL-LNGDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGE 120
Query: 112 PKLRATSAS 120
K+ A
Sbjct: 121 EKVSAGEMD 129
>gi|283954051|ref|ZP_06371576.1| hypothetical protein C414_000080039 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794330|gb|EFC33074.1| hypothetical protein C414_000080039 [Campylobacter jejuni subsp.
jejuni 414]
Length = 211
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG----VAKRYP 56
M+ + F+ ++ ++R I D++ F DV L + + + +
Sbjct: 1 MN-LELFKKDNLEVRAIKDENNEPLFCLSDVCKILELTTPAKVADTIKREFELYELNSHS 59
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK--- 113
T G+++ +I E +Y ++ S +A+ F WV EVLP++RK G+Y +
Sbjct: 60 FDTGFGVKEFTMIDEAQLYYVMNNSRSKNAKPFRMWVNREVLPSIRKNGNYMQKEFSKEL 119
Query: 114 ----LRATSASTVLRVHKHLEELAKQAGLKDNQLLLK--VNRGVTKITGVDQLEAMDIKH 167
A+ + K+ E K +++ + LL N+ + K++ + +I
Sbjct: 120 YSLLNDLKQANCIKDKLKNENESLKDELIQNQRELLSFYKNKDLKKVSTAPLCQD-EIDQ 178
Query: 168 LPSSDNDEYLTITQIGERLNPPQRA 192
+ + + + + I ++N + +
Sbjct: 179 IYALYDQGF-NFSAIAAKINRSKSS 202
>gi|215401314|ref|YP_002332618.1| BRO-D [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448814|gb|ACH88604.1| BRO-D [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 356
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 109/275 (39%), Gaps = 58/275 (21%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F E ++R +V+ ++N+ FVAKD+A L YE++ A+ H K
Sbjct: 1 MSLVKVGLFKFGEEEFELRYVVEDNKNVKFVAKDIALMLKYEDTKGAVQKHVDTKYKSTY 60
Query: 57 LKTEG-----------GIQK-----------------------VRIISEPDVYRLLVKST 82
G Q +I++ V +L++KS
Sbjct: 61 QPNGQTNFDVGSAKIEGSQNGSLLKIGAAKIVGRNSPLYLHPATWMITKAGVIQLIMKSK 120
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
LP A + + W+ EEV+P + TG YS P + V R++K + + ++ + Q
Sbjct: 121 LPYAVELQEWLLEEVIPQVLCTGKYS---PAITNDENDAV-RLYKDFQVIVQKKDEQLQQ 176
Query: 143 LLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
L +++ R + + I + + N Y + ++ + + + ++ +
Sbjct: 177 LTVQIQRMAEQ-------KDQAIHRIMNDMNRMYTGFQETMQKKDEMMAQKDM--MMALK 227
Query: 203 GLQVSKV-------SGGYRPTPKGEERGGKMCDVP 230
QVSK+ S P E++ +C
Sbjct: 228 DEQVSKMIDKMVDLSDRAVQYPANEKKLPMICIAK 262
>gi|15078913|ref|NP_149664.1| 201R [Invertebrate iridescent virus 6]
gi|82012215|sp|Q91FW9|VF201_IIV6 RecName: Full=Putative Bro-N domain-containing protein 201R
gi|15042283|gb|AAK82063.1|AF303741_201 201R [Invertebrate iridescent virus 6]
Length = 419
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---------VAKRY 55
++I+ ++ +F KDV T LGY++ +A+ K K+
Sbjct: 16 ITINGNEHQIKLAGII-EDPYFCGKDVCTILGYKDKEQALRKRVKSKHKKSLSELFEKKL 74
Query: 56 PLKTEG----GIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
P+ T G G Q K I+EP +Y L++ S P A++F+ V+E++LP++RK
Sbjct: 75 PVVTTGNFFLGTQNELSYHEGKSIYINEPGLYNLIMSSEAPFAEQFQDMVYEKILPSIRK 134
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
GSYS+E + +SA L + EE + Q+ L+ R + +
Sbjct: 135 YGSYSIEQ---KLSSAMEQLALKDKSEE--------ELQIKLQEERIEKENAYMKLRSEA 183
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPP 189
E+ T+ E L
Sbjct: 184 KRHKEQIKRTLEFNQATKQIEPLEYI 209
>gi|281420718|ref|ZP_06251717.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
gi|281405491|gb|EFB36171.1| toxin-antitoxin system, toxin component, Bro family [Prevotella
copri DSM 18205]
Length = 273
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 45/249 (18%)
Query: 32 ATALGYENSNEAINAHCKGVAKRYPLKTEG----GIQKVRIISEPDVYRLLVKSTLPSAQ 87
N ++A+ + +K +G ++ ++E Y L++ S LP+A
Sbjct: 6 CAVYQLVNPHDAVK---HSIRVTTGIKKDGSEAKRWCQLLFVNESGFYALVLGSKLPTAV 62
Query: 88 KFERWVFEEVLPTLRKTGSY----SVEAPKLRATSASTVLRV-HKHLEELAKQAGLKDNQ 142
KF+ WV EVLP +RKTG Y E+ + A +LR K E L K ++ +Q
Sbjct: 63 KFKNWVTSEVLPQIRKTGGYIPVKQGESDEETIRHAEEILRATLKEKENLLKNQQVQIDQ 122
Query: 143 ---LLLKVNRGVTKITG----------------------VDQLEAMDIKHLPSSDNDEYL 177
L+ + + + ++ G VD L + ++
Sbjct: 123 QKKLIGEQDTEIRRLNGVVDEQVVCIAKNGENIIQLENQVDHLLPKALYTDNVLNSVSCY 182
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-----GKMCDVPMQ 232
T TQI + L A+ LN+ L +Q + SG Y G + P
Sbjct: 183 TTTQIAKELGIT--AQELNRQLCALHIQYYQ-SGQYLLYADYAHMGLAKSRTRYSTHPDP 239
Query: 233 HVEGSTQQL 241
H +G+ ++L
Sbjct: 240 HCDGAQEKL 248
>gi|256060414|ref|ZP_05450587.1| BRO family protein [Brucella neotomae 5K33]
gi|261324400|ref|ZP_05963597.1| BRO family protein [Brucella neotomae 5K33]
gi|261300380|gb|EEY03877.1| BRO family protein [Brucella neotomae 5K33]
Length = 140
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 20/129 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVLLNGG-PWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGE 120
Query: 112 PKLRATSAS 120
K+ A
Sbjct: 121 EKVSAGEMD 129
>gi|33331801|gb|AAQ11109.1| BRO-E [Mamestra configurata NPV-A]
Length = 361
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT------------EG 61
+R +VD ++N+ FVAKD+A L YE+ A+ H K T EG
Sbjct: 18 LRYVVDDNKNVKFVAKDIALMLKYEDPKGAVQKHVDTKYKTPYQPTCQNNIEVGAAKIEG 77
Query: 62 G----------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 78 GQNGSLAQNGAAKIVGQNSPLYLHPSTWMITKAGVIQLIMKSKLPHAVELQEWLLEEVIP 137
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y+ A S +R++K + + ++ KD QL + +I + +
Sbjct: 138 QVLCTGKYN-PAISSGEDDESYAMRLYKDFQLIVQK---KDEQL----QQLTARIQKMSE 189
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV-------SGG 212
+ I + + N Y ++ + + + +++++ QVSK+ SG
Sbjct: 190 QKDQVIHRIMNDMNRMYTGFQDTMQKKDEIMAQKDM--MMVQKDEQVSKMIDRMVDLSGR 247
Query: 213 YRPTPKGEERGGKMCDVP 230
P +++ +C
Sbjct: 248 AVQYPANDKKLPMICIAK 265
>gi|327198673|emb|CCA61374.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 329
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----------------K 49
F F N ++ + DQ WF AKDV LGY A +H K
Sbjct: 33 VFSFHDNSVKMVGTLDQ-PWFKAKDVLKVLGYSEEKSATKSHIQRCVPDRYKKDLTDIFK 91
Query: 50 GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
G +G + I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++
Sbjct: 92 GGRIGCGHPIDGNEGREVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AM 148
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
E R T+ T LR+ ++EL ++ LL + N + K+ + + L
Sbjct: 149 ETILNRNTALDTNLRLV--VKELVTV-RTQNETLLEQNNLALAKLANMGIQLNETNEQLN 205
Query: 170 SSDND 174
+N
Sbjct: 206 EMNNK 210
>gi|257470314|ref|ZP_05634405.1| BRO domain-containing protein [Fusobacterium ulcerans ATCC 49185]
Length = 272
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-----AHCKGVAKRYPLKTEGGIQKV 66
+R +D+ + + +DVA LG+ + ++ N K + GG +
Sbjct: 7 KNVRGYIDEKETAFLNLEDVAHGLGFTETAKSGNEVVRWRRVKDYLVDLRVIATGGDGQG 66
Query: 67 R-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+ I E Y+L +K+ +A+KF+ V +E+LPT+RK G Y E KL
Sbjct: 67 KQSLPEFIPENIFYKLCMKANNQTARKFQDLVCDEILPTIRKNGMYVTE--KLLDDPDLA 124
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ K EE K+ L+ L+V + K + + E + + E + I+Q
Sbjct: 125 IKAFTKLKEEREKRKQLESKVENLQVENEIQKQV-ISEFEPVKEYMDFILSSAETMCISQ 183
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I A LNK+L ++G+ + KV+ + + +G
Sbjct: 184 IAADYGLSGHA--LNKILNEKGI-IRKVNDQWILYKEHMNKG 222
>gi|317064525|ref|ZP_07929010.1| prophage antirepressor [Fusobacterium ulcerans ATCC 49185]
gi|313690201|gb|EFS27036.1| prophage antirepressor [Fusobacterium ulcerans ATCC 49185]
Length = 269
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 16/222 (7%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-----AHCKGVAKRYPLKTEGGIQKV 66
+R +D+ + + +DVA LG+ + ++ N K + GG +
Sbjct: 4 KNVRGYIDEKETAFLNLEDVAHGLGFTETAKSGNEVVRWRRVKDYLVDLRVIATGGDGQG 63
Query: 67 R-----IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+ I E Y+L +K+ +A+KF+ V +E+LPT+RK G Y E KL
Sbjct: 64 KQSLPEFIPENIFYKLCMKANNQTARKFQDLVCDEILPTIRKNGMYVTE--KLLDDPDLA 121
Query: 122 VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ K EE K+ L+ L+V + K + + E + + E + I+Q
Sbjct: 122 IKAFTKLKEEREKRKQLESKVENLQVENEIQKQV-ISEFEPVKEYMDFILSSAETMCISQ 180
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
I A LNK+L ++G+ + KV+ + + +G
Sbjct: 181 IAADYGLSGHA--LNKILNEKGI-IRKVNDQWILYKEHMNKG 219
>gi|22549491|ref|NP_689264.1| BRO-D [Mamestra configurata NPV-B]
gi|22476670|gb|AAM95076.1| BRO-D [Mamestra configurata NPV-B]
Length = 356
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 110/275 (40%), Gaps = 58/275 (21%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY- 55
MS + F+F E ++R +V+ ++N+ FVAKD+A L YE++ A+ H K
Sbjct: 1 MSLVKVGLFKFGEEEFELRYVVEDNKNVKFVAKDIALMLKYEDTKGAVQKHVDTKYKSTY 60
Query: 56 ---------------------PLKTEGG------------IQKVRIISEPDVYRLLVKST 82
L GG +I++ V +L++KS
Sbjct: 61 QPNGQTNFDVGLAKIEGSQNGSLLKVGGAKIVGRNSPLYLHPATWMITKAGVIQLIMKSK 120
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
LP A + + W+ EEV+P + TG YS P + V R++K + + ++ + Q
Sbjct: 121 LPYAVELQEWLLEEVIPQVLCTGKYS---PAITNDENDAV-RLYKDFQVIVQKKDEQLQQ 176
Query: 143 LLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
L +++ + + + I + + N Y + ++ + + L ++ +
Sbjct: 177 LTVQIQKMAEQ-------KDQAIHRIMNDMNRMYTGFQETMQKKDKMMAQKDL--MMALK 227
Query: 203 GLQVSKV-------SGGYRPTPKGEERGGKMCDVP 230
QVSK+ S P E++ +C
Sbjct: 228 DEQVSKMIDKMVDLSDRAVQYPANEKKLPMICIAK 262
>gi|20069969|ref|NP_613173.1| BRO-e [Mamestra configurata NPV-A]
gi|20043363|gb|AAM09198.1| BRO-e [Mamestra configurata NPV-A]
Length = 360
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT------------EG 61
+R +VD ++N+ FVAKD+A L YE+ A+ H K T EG
Sbjct: 18 LRYVVDDNKNVKFVAKDIALMLKYEDPKGAVQKHVDTKYKTPYQPTCQNNIEVGAAKIEG 77
Query: 62 G----------------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 78 GQNGSLAQNGAAKIVGQNSPLYLHPSTWMITKAGVIQLIMKSKLPHAVELQEWLLEEVIP 137
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y+ A S +R++K + + ++ KD QL + +I + +
Sbjct: 138 QVLCTGKYN-PAISSGEDDESYAMRLYKDFQLIVQK---KDEQL----QQLTARIQKMSE 189
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV-------SGG 212
+ I + + N Y ++ + + + +++++ QVSK+ SG
Sbjct: 190 QKDQVIHRIMNDMNRMYTGFQDTMQKKDEIMAQKDM--MMVQKDEQVSKMIDRMVDLSGR 247
Query: 213 YRPTPKGEERGGKMCDVP 230
P +++ +C
Sbjct: 248 AVQYPANDKKLPMICIAK 265
>gi|165969059|ref|YP_001650959.1| baculovirus repeated ORF c [Orgyia leucostigma NPV]
gi|164663555|gb|ABY65775.1| baculovirus repeated ORF c [Orgyia leucostigma NPV]
Length = 343
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 16/209 (7%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG--------- 50
MS + F ++ ++ D D +W +A A L Y N+ +AI
Sbjct: 1 MSVVKVQFANADLEVISVRDNDGQVWMLANPFARVLEYSNAPKAITTFVDHDNQKYFEEI 60
Query: 51 ----VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
V + + + K + I+ ++ L+ S +P A++F W+ ++LP L G
Sbjct: 61 KSSQVGQTCVVTSSCVQAKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDEGR 120
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD-NQLLLKVNRGVTKITGVDQLEAMDI 165
Y + A A+ + +H + ++D QL V + I +
Sbjct: 121 YDM-AVDAPIKIANGMNAMHAITNDGKDAPWMEDLRQLRNSVVQKDKIIEAISYENKELS 179
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARF 194
L +S+ + + + N +A
Sbjct: 180 LSLRTSNEKLMYFASALVDSNNGLIKANE 208
>gi|294851652|ref|ZP_06792325.1| BRO family protein [Brucella sp. NVSL 07-0026]
gi|294820241|gb|EFG37240.1| BRO family protein [Brucella sp. NVSL 07-0026]
Length = 177
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ + + WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVL-LNGDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGLYVRGE 120
Query: 112 PKLRA---TSASTVLRVHKHLEELAKQ 135
K+ A L L+E K+
Sbjct: 121 EKVSAGEMDLEELTLITLTRLQEKMKR 147
>gi|96979823|ref|YP_611028.1| bro-b [Antheraea pernyi nucleopolyhedrovirus]
gi|33589244|dbj|BAC81743.1| bro [Antheraea pernyi nucleopolyhedrovirus]
gi|94983356|gb|ABF50296.1| bro-b [Antheraea pernyi nucleopolyhedrovirus]
gi|146229722|gb|ABQ12287.1| baculovirus repeated ORF [Antheraea pernyi nucleopolyhedrovirus]
Length = 339
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 10/184 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA---------KRYPL 57
F ++ T+ D + W VA A L Y N+AI H R
Sbjct: 8 FVNGPLEVFTVQDVGRENWMVANPFAETLKYSKPNKAIVQHVSKQNQKTLEELRSNRCGT 67
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ + I+ V+ L+ S +P+A+KF++W ++LPTL + G YS+
Sbjct: 68 IASSLHPQTKFINTAGVFELINASGMPAAKKFKQWNTNDLLPTLCQEGEYSMVVDA-PPK 126
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
A + VH E + KD + KI + E + + N +
Sbjct: 127 IAEGMNAVHVATNEGQEAPWAKDLEFYKVSLAEKDKIIAIKTNENQQLATALQTANQNLM 186
Query: 178 TITQ 181
+
Sbjct: 187 DANK 190
>gi|114680001|ref|YP_758451.1| bro-j [Leucania separata nuclear polyhedrosis virus]
gi|39598732|gb|AAR28918.1| bro-j [Leucania separata nuclear polyhedrosis virus]
Length = 344
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F + ++ +I+D++ +W +A A L Y +N+A+ H +
Sbjct: 8 FANNNLEVVSIMDEEGQLWMLANPFARILEYSRANDAVRQHVSEFNHKNFEEIKSRRFIV 67
Query: 56 -PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ + K + I+ ++ L+ S +P AQ+F+ W+ ++LP L + GSY++ A
Sbjct: 68 TSMTSSSVQAKSKFINRAGLFELIQASRMPKAQEFKNWINSDLLPKLCQDGSYNM-ATDA 126
Query: 115 RATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAMDIK---- 166
+ VH E A+ +K +++ ++ + ++ ++ ++ ++
Sbjct: 127 PIEIVEGMNAVHVVTNEGAEAPWMKYLHELRDAVVQKDKIIEAVSYENKELSLSLRTSNE 186
Query: 167 HLPSSDNDEYLTITQIGERLNPPQRARF 194
L +++ + + E N +A
Sbjct: 187 KLQDANDKLMYFASALVESNNGLMKANE 214
>gi|90592767|ref|YP_529720.1| BRO-A [Agrotis segetum nucleopolyhedrovirus]
gi|71559217|gb|AAZ38216.1| BRO-A [Agrotis segetum nucleopolyhedrovirus]
Length = 324
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 34/174 (19%)
Query: 4 ITPFEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
I F+F K+R +V D+++ FVAKD+A+ L YE A+ H K Y L+
Sbjct: 6 IGVFKFGEDKFKLRYVVGNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKCYFLEKGP 65
Query: 62 GIQ--------------------------------KVRIISEPDVYRLLVKSTLPSAQKF 89
I+ + +I++ V +L++KS LP A +
Sbjct: 66 RIEDPSFGDNGSVGVEVSIIKKDLIKKGHPLFLYDQTILITKSGVIQLIMKSKLPYAVEL 125
Query: 90 ERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
+ W+ EEV+P + TG Y + + + K +EL D +
Sbjct: 126 QEWLLEEVIPQVLCTGKYQPAVANNSECLSKSNEMILKMSQELILAKQNSDAMI 179
>gi|9631113|ref|NP_047783.1| Ld-bro-l [Lymantria dispar MNPV]
gi|3822381|gb|AAC70332.1| Ld-bro-l [Lymantria dispar MNPV]
Length = 353
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F ++ T+ D++Q W VA A ALGY N A+ H V ++
Sbjct: 8 FVNGPLEVFTVQDENQEKWMVANPFAEALGYTRLNYAVTQHVSVVNQKTYEEFKSQGSTA 67
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
L K + I++ V+ L+ S +P+A++F+ W ++LPTL G YS+
Sbjct: 68 TDDSSLLPRNIQAKTKFINQAGVFELIGASEMPAAKRFKTWNTNDLLPTLCAEGEYSMSR 127
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ A + VH E + +KD L ++ +I V + E +
Sbjct: 128 DA-PSDIAQGMNAVHSATNEGREAPWIKDLNYLKEIICKKDEIIAVKEDENKKLTISLQE 186
Query: 172 DNDEYLTITQ 181
N + +
Sbjct: 187 TNQNLIIANK 196
>gi|22549522|ref|NP_689295.1| BRO-E [Mamestra configurata NPV-B]
gi|22476701|gb|AAM95107.1| BRO-E [Mamestra configurata NPV-B]
Length = 349
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 28/246 (11%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL--------KTEGGIQK 65
I TI D WF AK+ A+ +GYE + I+ K K+Y T
Sbjct: 21 IETIDDDKVQFWFAAKEFASCMGYERPDLVISKVDKNYQKKYEQFYDLRLTGITSSTHPH 80
Query: 66 VRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS--- 120
++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++ + ++
Sbjct: 81 TVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKIDTAVVPTSNNDVNT 140
Query: 121 --TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + +++ L + N ++ K + + ++ A + + +
Sbjct: 141 VALLQTISQNIVCLKEDNDYLRNAIVRKDEQLHENQKMMQKICAEKDEMIQKIVVHKDQQ 200
Query: 179 ITQIGERLN---------PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
I ++ +N ++ + L+ K V +S P E++ +C
Sbjct: 201 INRVMNDMNRMYTGFQETMQKKDEQVTSLVEK----VIDLSDRAVEYPVSEKKQPILCIA 256
Query: 230 PMQHVE 235
Q
Sbjct: 257 KDQTGT 262
>gi|134287312|ref|YP_001111008.1| Bro21 [Heliothis virescens ascovirus 3e]
gi|133722220|gb|ABO37342.1| Bro21 [Heliothis virescens ascovirus 3e]
Length = 364
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 22/175 (12%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC----------- 48
MS +T +F ++ T VD + W VA A AL Y N N AI H
Sbjct: 1 MS-LTKVQFGDKEVETYTVDFNGEKWMVANPFAEALSYSNVNRAIRVHVSEKNQQNYEEF 59
Query: 49 ----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
G+ K + I+ V+ L+ S +P A++F+ W ++LP L +
Sbjct: 60 KSDRHGLTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPGLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKIT 155
G Y + A A A + VH E +KD +++ +R + +T
Sbjct: 120 GEYKM-ARDAPADIAHGMNAVHVATNEGVAAPWMKDLDHLKTAIVEKDRKIDDLT 173
>gi|86355608|ref|YP_473276.1| BRO-d [Hyphantria cunea nucleopolyhedrovirus]
gi|86198213|dbj|BAE72377.1| BRO-d [Hyphantria cunea nucleopolyhedrovirus]
Length = 328
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F ++ +R +VD D I FVAKDVA +L Y N +A+ + K
Sbjct: 1 MSRVKVNEFKFGEDTFALRYVVDCDHVIRFVAKDVAASLKYVNCKQAVIVNVDDKYKCTF 60
Query: 57 LKTEGG-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 EQRSTPYTLASDSVARQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y AP ++ + ++ K L+ + KD ++ + V +
Sbjct: 121 QVLCTGKY---APAVKMDTDE--IQETKKLDAYKRDVAEKDEKIQSLTTALMETNQQVVK 175
Query: 160 LEAMDI 165
I
Sbjct: 176 FANALI 181
>gi|68304205|ref|YP_249673.1| BRO-B [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973034|gb|AAY84000.1| BRO-B [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 635
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 17/167 (10%)
Query: 3 TITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------ 55
+++ +F ++ T VD D W A A AL Y N+AI ++
Sbjct: 139 SLSKVQFGDKEVETYTVDVDGEKWMAANPFAEALKYSKPNKAILEKVSTENQKIYEEINS 198
Query: 56 ---------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS 106
+ + I+ V+ L+ ST+P+A++F+ W ++LPTL + G
Sbjct: 199 YRIGTGDDSSVLPRNIKSNTKFINRAGVFELINASTMPAAKRFKAWNTNDLLPTLCQQGE 258
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
YS+ A + VH E K+ QL+ + K
Sbjct: 259 YSMTADA-PVEIQEGMNAVHAATNEGKSAIWAKEKQLMELKMEVMEK 304
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK----- 58
+T F E+ ++ +VD+ W +A A L Y N+ AI + +
Sbjct: 7 MTSFGNENLEVVCVVDESGERWMLANPFAKILEYSNAPNAIAKYVSDKNQLCIEDCRSSH 66
Query: 59 ----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T K + I++ ++ L+ S +P AQ+F++W+ ++LP L G Y ++ L
Sbjct: 67 IGQITSSLHPKTKFINKAGLFELIQNSKMPKAQEFKQWINFDLLPKLCDKGRYDMQVDVL 126
Query: 115 RATSAS------TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
A ++ +V +E+ D + + N + + ++ +
Sbjct: 127 ANNCAQKNYDGISLSKVQFGDKEVETYTVDVDGEKWMAANP-FAEALKYSKPNKAILEKV 185
Query: 169 PSSDNDEYLTIT 180
+ + Y I
Sbjct: 186 STENQKIYEEIN 197
>gi|13095813|ref|NP_076703.1| anti-repressor [Lactococcus phage bIL309]
gi|15672425|ref|NP_266599.1| prophage pi1 protein 08 [Lactococcus lactis subsp. lactis Il1403]
gi|12723321|gb|AAK04541.1|AE006281_7 prophage pi1 protein 08 [Lactococcus lactis subsp. lactis Il1403]
gi|12831002|gb|AAK08356.1|AF323670_8 anti-repressor [Lactococcus phage bIL309]
Length = 251
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 85/247 (34%), Gaps = 14/247 (5%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M + F + + +NI F A+ A A+G + K L
Sbjct: 1 MKELQNFTNGIFNL-DVKVDGENILFSAEQAAKAMGITQVKNG-KEYVKWERVNSYLPNS 58
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-TSA 119
+ K ISEP VY+L K+ ++KF W+ EVLPT+RK G+Y ++ A +
Sbjct: 59 PEVGKGSFISEPMVYKLAFKANNAVSEKFTDWLAVEVLPTIRKHGAYMTDSKLEEALLNP 118
Query: 120 STVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T++ + L +E ++A L+ L V + ++ + + +
Sbjct: 119 DTLINLATQLKQEREEKAQLRALNSTLAVENQI--------MQPKAQYFDDLVERNLLTS 170
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
+ L Q + L LL+ P + ++ +
Sbjct: 171 FRDTAKMLKVGQ--KQLIDWLLENKYIYRDKKNKLMPYAQYNNDLFEIKESKGATNSWKG 228
Query: 239 QQLKWNS 245
Q
Sbjct: 229 AQTLITP 235
>gi|134287309|ref|YP_001111005.1| Bro20 [Heliothis virescens ascovirus 3e]
gi|133722217|gb|ABO37339.1| Bro20 [Heliothis virescens ascovirus 3e]
Length = 191
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 13 KIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPLKTEGGIQ----K 65
+ ++ D+ D W A A AL Y N + A+ H K K L+T +
Sbjct: 34 DVLSVTDERDGETWLQANPFAMALDYVNVSNAVARHVSSKNQRKYKELETRHRGCVIRAR 93
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVL 123
+ I+ ++ L++ S +P A+KF+RWVF ++LP L + G Y + EAP + S + V
Sbjct: 94 TKFINRAGMFELIMSSRMPRARKFQRWVFSDLLPKLCQNGQYDMRTEAPPMIVESMNVVR 153
Query: 124 RVHKHLEELAKQAGLK 139
+ + + ++ K
Sbjct: 154 ILTTNNDSERPRSTAK 169
>gi|116326131|ref|YP_803457.1| baculovirus repeated ORF-e [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180869|gb|ABI13846.1| baculovirus repeated ORF-e [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 320
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 33/172 (19%)
Query: 4 ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY------ 55
I F+F ++ +R + + D + FVAKD+A L Y+++ +A+ H K
Sbjct: 6 IGQFKFGEDTFTLRYMFNNDNVLKFVAKDIADKLNYQDTKKAVKDHVDDKYKCAFDQERQ 65
Query: 56 --PLKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
PL +++ +I++ V +L++KS LP A + + W+ EEV+P + T
Sbjct: 66 FAPLAENSAVKQGDPLYLHPSTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCT 125
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
G Y AP ++ + T+ +K N L + N + +I+
Sbjct: 126 GKY---APAIKMETDETLSTAL-----------IKSNADLAQANANIVEISK 163
>gi|292397783|ref|YP_003517849.1| BRO-I [Lymantria xylina MNPV]
gi|291065500|gb|ADD73818.1| BRO-I [Lymantria xylina MNPV]
Length = 345
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 14/193 (7%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-------- 58
F ++ T+ D Q W A A L Y N+AI H ++ +
Sbjct: 8 FVNGPLEVFTVQDDKQENWMAANPFAEVLKYSRPNKAIQQHVSAKNQKTLEEMRSHCSGA 67
Query: 59 -TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T + + I+ V+ L+ S +P+A++F++W +LPTL + G YS+ +
Sbjct: 68 LTSSLHPQTKFINTAGVFELIDASEMPAAKRFKQWNANNLLPTLCQEGEYSMSKDA-PSD 126
Query: 118 SASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
A + +H E + KD L K + + + V ++ + + L +
Sbjct: 127 IAQGMNAIHVATNEGREAPWAKDLEFYKSALAKRDEALAEKNKVIAAKSDENRRLTVALQ 186
Query: 174 DEYLTITQIGERL 186
D + + + L
Sbjct: 187 DANQNLVEANKGL 199
>gi|255102979|ref|ZP_05331956.1| hypothetical protein CdifQCD-6_19373 [Clostridium difficile
QCD-63q42]
Length = 273
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 35/230 (15%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI----- 63
FE K+ +++ + + F D L +S AI H + + +
Sbjct: 8 FEEKKVE-VLEYNGQVLFNPYDCGRCLELSDS--AIRNHLSKMNDTQAVLLKNSNVLDKD 64
Query: 64 ------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA--PKLR 115
+ ++E VY+L+ KS A++F+ W+ +EVLP +R+TG+Y P
Sbjct: 65 FRKLHNTGEKFLTESGVYKLIFKSKKEEAERFQDWISDEVLPAIRQTGAYITNNADPDKL 124
Query: 116 ATSASTVLRVH------KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
AS + ++ L+EL AG DN+ L + + K G+D +
Sbjct: 125 REKASEIEKLQLAYNSTSMLKELLDGAGF-DNKSKLLTAKTLYKKAGIDLP-------IE 176
Query: 170 SSDNDEYLTITQIGERLNPPQRA-----RFLNKLLLKRGLQVSKVSGGYR 214
++ + Y QI +L ++ + +++ K L+ ++V G +
Sbjct: 177 INEEEHYFDTKQIASKLKIYSKSNKPAQMAVCEIIKKIDLEENEVKGVWE 226
>gi|254713153|ref|ZP_05174964.1| BRO family protein [Brucella ceti M644/93/1]
gi|254716493|ref|ZP_05178304.1| BRO family protein [Brucella ceti M13/05/1]
gi|261218284|ref|ZP_05932565.1| BRO family protein [Brucella ceti M13/05/1]
gi|261320868|ref|ZP_05960065.1| BRO domain-containing protein [Brucella ceti M644/93/1]
gi|260923373|gb|EEX89941.1| BRO family protein [Brucella ceti M13/05/1]
gi|261293558|gb|EEX97054.1| BRO domain-containing protein [Brucella ceti M644/93/1]
Length = 140
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ +++ WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVL-LNRDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGE 120
Query: 112 PKLRATSAS 120
K+ A
Sbjct: 121 EKVSAGEMD 129
>gi|209978807|ref|YP_002300550.1| BRO A II [Adoxophyes orana nucleopolyhedrovirus]
gi|192758789|gb|ACF05324.1| BRO A II [Adoxophyes orana nucleopolyhedrovirus]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 13/164 (7%)
Query: 1 MSTITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA------ 52
MS ++ F + ++ T+ Q W VA A L Y N+AI H
Sbjct: 1 MS-LSKINFVNGPLEVFTVQSDKQENWMVANPFAETLKYAKPNKAILQHVSQENQKTLEE 59
Query: 53 ---KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
R T + + I+ V+ L+ S +P+A++F+ W ++LPTL G YS+
Sbjct: 60 LRANRCGTITSSLHPQTKFINTAGVFELINASEMPAAKQFKHWNTNDLLPTLCHEGEYSM 119
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+ VH + +KD + K + K
Sbjct: 120 TVDAPEVI-VEGMNAVHAATNVGREAPWVKDLEHYKKAIQEKDK 162
>gi|68304191|ref|YP_249659.1| BRO-A [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973020|gb|AAY83986.1| BRO-A [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 517
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 82/209 (39%), Gaps = 20/209 (9%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----------RY 55
F E + T+VD D +W +A A L Y N+ +AI+ + R
Sbjct: 50 FGNEDIAVVTMVDDDGQLWMLANPFARILEYSNAPKAISTFVSDKNQLCFENLKSSQSRQ 109
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
T K + I++ ++ L+ S +P AQ+F++W+ ++LPTL + YS +
Sbjct: 110 TCMTSSLHPKTKFINKAGLFELIQNSKMPQAQEFKQWINSDLLPTLCQQREYS-PHKNYQ 168
Query: 116 ATSASTVLRVHKHLEE-----LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
S + + V E + + + N +N + I + + + +
Sbjct: 169 NMSLTKINFVDDKEVETYTIDVDGEKWMAANPFAKALNYSLPHIA-ISKFVTNENQKTYE 227
Query: 171 SDNDEYLTITQIGERL--NPPQRARFLNK 197
N T T L N + +F+N+
Sbjct: 228 EINPIRFTSTDDSSVLPRNIQAKTKFINQ 256
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 83/219 (37%), Gaps = 27/219 (12%)
Query: 1 MSTITPFEF-ESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--- 55
MS +T F + ++ T +D D W A A AL Y + AI+ ++
Sbjct: 170 MS-LTKINFVDDKEVETYTIDVDGEKWMAANPFAKALNYSLPHIAISKFVTNENQKTYEE 228
Query: 56 ------------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
+ K + I++ V+ L+ ST+P+A++F+ W ++LPTL +
Sbjct: 229 INPIRFTSTDDSSVLPRNIQAKTKFINQAGVFELINASTMPAAKRFKAWNTNDLLPTLCQ 288
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
G YS+ A + VH E + ++D L KI V E
Sbjct: 289 QGEYSMTADA-PVEIQEGMNAVHAATNEGREAPWMEDLHKLRNSVVQKDKIIEVISYENK 347
Query: 164 DI--------KHLPSSDNDEYLTITQIGERLNPPQRARF 194
++ + L +++ + + + N +A
Sbjct: 348 ELSVSLRTSNEKLQDANDKLMYFASALVDSNNGLMKANE 386
>gi|254701081|ref|ZP_05162909.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261751613|ref|ZP_05995322.1| BRO family protein [Brucella suis bv. 5 str. 513]
gi|261741366|gb|EEY29292.1| BRO family protein [Brucella suis bv. 5 str. 513]
Length = 140
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
++ R ++ + + WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRARVVL-LNGDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+L+++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGE 120
Query: 112 PKLRATSAS 120
K+ A
Sbjct: 121 EKVSAGEMD 129
>gi|116326173|ref|YP_803499.1| baculovirus repeated ORF [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180911|gb|ABI13888.1| baculovirus repeated ORF [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 358
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 14/200 (7%)
Query: 1 MSTITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--- 55
MS++ +FE+ ++ + D D +W +A A L Y N+ +A+ ++
Sbjct: 19 MSSVIKTQFENKILEVTKVEDTDGQLWMLANPFARVLEYANAPKAVTKFVSNNNQKCCEE 78
Query: 56 ------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
T + I+ ++ L+ S +P AQ+F++W+ E++LP L G YS+
Sbjct: 79 IQSAQSGQITSSLHPHSKFINRAGLFELIQSSRMPKAQQFKQWINEDLLPKLCDKGEYSM 138
Query: 110 --EAPKLRATSASTVLRVHKHLEELAKQAGLK-DNQLLLKVNRGVTKITGVDQLEAMDIK 166
+AP A + V + ++ A LK L+K + + V + + +
Sbjct: 139 AVDAPAEIAEGMNAVHAAVTNGQQSPWMADLKFYKNELVKRDNAIENRDKVIAAKNEENQ 198
Query: 167 HLPSSDNDEYLTITQIGERL 186
L ++ L + + + L
Sbjct: 199 QLATALQTANLNLVEANKGL 218
>gi|163842543|ref|YP_001626947.1| hypothetical protein BSUIS_A0282 [Brucella suis ATCC 23445]
gi|163673266|gb|ABY37377.1| Uncharacterized protein HI1418 [Brucella suis ATCC 23445]
Length = 140
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ + + WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVL-LNGDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
G + +SE +Y+ +++S P A+KF+ WV + VLP +RK G Y
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKPIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVHGE 120
Query: 112 PKLRATSAS 120
K+ A
Sbjct: 121 EKVSAGEMD 129
>gi|15320795|ref|NP_203305.1| CUN001 putative bro protein, ATP_GTP_A motif, similar to AcMNPV ORF
2 [Culex nigripalpus NPV]
gi|15278257|gb|AAK94079.1|AF403738_1 CUN001 putative bro protein, ATP_GTP_A motif, similar to AcMNPV ORF
2 [Culex nigripalpus NPV]
Length = 593
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 48/266 (18%)
Query: 13 KIRTIVDKD-QNIWFVAKDVATALGYENSNEA-------------------INAH----- 47
+ RT + +W VAKDVA +LGYEN ++A +N
Sbjct: 147 EFRTYTEPGTGEVWVVAKDVAKSLGYENPSQAHARVVDAFKKNLGDFDFNGVNRMMLRCS 206
Query: 48 ------------------CKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKF 89
GV + K G + ++ +++E V +L+++S LP+A+++
Sbjct: 207 MYESAPPTPMQTDESELSDDGVGEEREAKLPGHLGRLVMLNEGGVQQLILESRLPNAKRY 266
Query: 90 ERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
++WV VLP++R+TG Y V K A L+ E+ L+ + + + +
Sbjct: 267 KQWVCGTVLPSIRRTGRYDVRDVKREDDLALAQLK-ADFAEQKLNNCELQRDLAITQRDL 325
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
V K + + L + + LN +L+ +
Sbjct: 326 AVEKCEKLKSQYELMKFQLIVGAGRNGMLAEDVQRDLNKVL-GEIQGRLIPELD---QHK 381
Query: 210 SGGYRPTPKGEERGGKMCDVPMQHVE 235
+ E G M V E
Sbjct: 382 KSCITIYGRTTEDGTAMVRVCRHQNE 407
>gi|219855058|ref|YP_002472180.1| hypothetical protein CKR_1715 [Clostridium kluyveri NBRC 12016]
gi|219568782|dbj|BAH06766.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 282
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 38/236 (16%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV-- 66
FE + + + + + ++F V LG + E + H + + +K +
Sbjct: 13 FEGHDVE-VFEINGMVYFNPYHVGECLGI--AKETVRYHLTKMNNKQAVKFTNSDVGLAN 69
Query: 67 ---------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+ ++E VY++ KS P A+KF WV +EVLP++R+TG+Y E A
Sbjct: 70 IRKLNNAGEKFLTESGVYKIAFKSEKPEAEKFTDWVTDEVLPSIRQTGAYISEKANTEAL 129
Query: 118 ----SASTVLRVHKHLEELAKQAGLK--DNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ ++K +E ++ + DN + L V + + GVD +
Sbjct: 130 KENNQPEKLETINKSVELVSPLLDVAGVDNTIKLLVVKTLFSKAGVDIP-------IEIE 182
Query: 172 DNDEYLTITQIGERLNPPQRA-----RFLNKLLLKRGLQ------VSKVSGGYRPT 216
+++ QI + + + + +++ K ++ V + SG ++ T
Sbjct: 183 AREKFYDTKQIAKMVGMYSKTGNPAFGAVGQIIKKLDIEEHEKEVVWESSGSWQGT 238
>gi|18138388|ref|NP_542684.1| BRO-B [Helicoverpa zea SNPV]
gi|18028770|gb|AAL56206.1|AF334030_131 ORF61 [Helicoverpa zea SNPV]
Length = 352
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/205 (18%), Positives = 84/205 (40%), Gaps = 18/205 (8%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---------PL 57
F ++ +I D + +W +A A L Y N+ +AI+ + + ++
Sbjct: 8 FANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVEINNQKILESIQSAQLGQ 67
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y + A
Sbjct: 68 ITSSLHPKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDM-ATDAPVG 126
Query: 118 SASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAMDIK----HLP 169
A + VH + A +KD +++ ++ + I+ ++ ++ ++ L
Sbjct: 127 IAMGMNAVHAIANDGADAPWMKDLHELRTAVVQKDKIIEAISYENKELSLSLRTSNEKLQ 186
Query: 170 SSDNDEYLTITQIGERLNPPQRARF 194
+++ + + E N +A
Sbjct: 187 GANDKLMYFASALVESNNGLMKANE 211
>gi|9631128|ref|NP_047798.1| Ld-bro-p [Lymantria dispar MNPV]
gi|3822396|gb|AAC70347.1| Ld-bro-p [Lymantria dispar MNPV]
Length = 337
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
Query: 7 FEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-- 62
F F ++R +++ + FVAKDVA +L Y+++ AI H K E
Sbjct: 32 FRFGEDVFRLRYVLND--PVKFVAKDVAGSLKYQDAKRAIRIHVDDKYKSTFEHGEIRSH 89
Query: 63 ---------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+I++ V +L++KS LP A + + W+ EEV+P + TG Y
Sbjct: 90 LASNALAKQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKY 149
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+ A + + ++ + ++LA + +++L V G+
Sbjct: 150 A-PAIAEESILRNEIVAKTEENKQLATALIEANGKIILFAGALVEANAGL 198
>gi|292397821|ref|YP_003517887.1| BRO-M [Lymantria xylina MNPV]
gi|291065538|gb|ADD73856.1| BRO-M [Lymantria xylina MNPV]
Length = 474
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 26/231 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F ++ T+ D+ Q W VA A ALGY+N I+ ++
Sbjct: 8 FVNGPLEVFTVQDEHQEKWMVANPFAEALGYKNCANVISKFVSAENQKIYEEIKSPRFEE 67
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-- 109
L K + I+ V+ L+ S +P+A++F+ W ++LPTL G YS+
Sbjct: 68 TDDSSLLPRNVQAKTKFINRAGVFELISASEMPAAKRFKTWNTNDLLPTLCAEGEYSMSR 127
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKD--NQLLLKVNRGVTKITGVDQLEAMDIKH 167
+AP A + + + + +KD QL + N + + +A+ +
Sbjct: 128 DAPSDIAAENTQIFNKFQFANLDLEIVKIKDRTGQLWMLANPFARILKYSNAPKAI-ATY 186
Query: 168 LPSSDNDEYLTIT--QIGE----RLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ ++ I Q+G+ L +++F+N+ L +Q SK+
Sbjct: 187 VSENNQLCLEKIQSAQVGQTDDSLLYIQPKSKFINRAGLFELIQASKMPRA 237
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 80/210 (38%), Gaps = 21/210 (10%)
Query: 7 FEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI- 63
F+F + + + KD +W +A A L Y N+ +AI + + K +
Sbjct: 144 FQFANLDLEIVKIKDRTGQLWMLANPFARILKYSNAPKAIATYVSENNQLCLEKIQSAQV 203
Query: 64 -----------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
K + I+ ++ L+ S +P AQ+F++W+ +LP L + G YS+
Sbjct: 204 GQTDDSLLYIQPKSKFINRAGLFELIQASKMPRAQEFKQWIGSNLLPKLCQEGEYSMSKD 263
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
+ + VH E + +KD L V K +++L L +S+
Sbjct: 264 A-PSDIVQGMNAVHAATNEGREAPWMKD--LTYMKTTIVEKDRKINELTT----ALTNSN 316
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKR 202
T + + N +A + R
Sbjct: 317 EKLVFFATALVDSNNGLMKANETIGRMADR 346
>gi|29567118|ref|NP_818680.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467894|dbj|BAC67284.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 333
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 1 MSTITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA------ 52
MS ++ F + ++ T+ Q W VA A L Y N+AI H
Sbjct: 1 MS-LSKINFVNGPLEVFTVQSDKQENWMVANPFAETLKYAKPNKAILQHVSQENQKTLEE 59
Query: 53 ---KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
R T + + I+ V+ L+ S +P+A++F++W ++LPTL G YS+
Sbjct: 60 LRANRCGTITSSLHPQTKFINTAGVFELINASEMPAAKQFKQWNTNDLLPTLCHEGQYSM 119
Query: 110 --EAPKLRATSASTVLRV---------HKHLEELAKQAGLKDNQL 143
+AP++ + V K LE K KD ++
Sbjct: 120 TVDAPEVIVEGMNAVHAATNVGREAPWAKDLEHYKKAIQEKDKKI 164
>gi|327198768|emb|CCA61469.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 365
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-------------- 52
F F+ N ++ + DQ WF AKDV LGY +A H +
Sbjct: 56 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDKKATQNHVQRCVPDKYKKYLGEIIKV 114
Query: 53 --KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R + I+EP +YRL+++S P+AQ F+ +V + +LP +RK +++
Sbjct: 115 AHIRCGQPVSYQEGREVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AMD 171
Query: 111 APKLRATSASTVLRV-----HKHLEELAKQAGLKDNQL 143
R T+ LR+ + L+EL + QL
Sbjct: 172 TILNRNTTLENSLRLVIKQNDEQLKELVEVRNQNQEQL 209
>gi|325171055|ref|YP_004251030.1| putative antirepressor protein [Vibrio phage ICP1]
gi|323512450|gb|ADX87905.1| putative antirepressor protein [Vibrio phage ICP1]
gi|323512681|gb|ADX88135.1| phage associated-antirepressor [Vibrio phage ICP1_2006_D]
gi|323512909|gb|ADX88362.1| phage associated-antirepressor [Vibrio phage ICP1_2006_C]
gi|323513137|gb|ADX88589.1| phage associated-antirepressor [Vibrio phage ICP1_2006_B]
gi|323513364|gb|ADX88815.1| phage associated-antirepressor [Vibrio phage ICP1_2006_A]
gi|323513596|gb|ADX89046.1| phage associated-antirepressor [Vibrio phage ICP1_2005_A]
gi|323513823|gb|ADX89272.1| phage associated-antirepressor [Vibrio phage ICP1_2001_A]
Length = 242
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 15/223 (6%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--------GVAKRYPLKTEGG 62
+++ +V +D F+A +V+ LGY+ + AHCK + K
Sbjct: 13 FGELQVVVYED-KPHFIANEVSDILGYKQHKDG-RAHCKSLIKLSLPDLRKLGLESLATN 70
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q + I E DVYR++++S LP A++F+ WV EEVLPT+RKTG + + ++ T
Sbjct: 71 PQGIIICPEKDVYRMVMRSNLPKAEEFQDWVMEEVLPTIRKTGGFVSDVDQIIDTFYKDE 130
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
K + A K+NQ + VT+ G + ++ K L N + + +I
Sbjct: 131 KEDIKAII-RASLVFRKENQHKIDFANDVTETVGWQDMNSV-AKVLGLGRNTLFRYLREI 188
Query: 183 GERLN---PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
G ++ P Q+ + + + + KGE
Sbjct: 189 GILMDNNLPYQQYITQGYFRVNPVTKYGRQFNVTLVSGKGEVW 231
>gi|292397828|ref|YP_003517894.1| BRO-N [Lymantria xylina MNPV]
gi|291065545|gb|ADD73863.1| BRO-N [Lymantria xylina MNPV]
Length = 341
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 26/184 (14%)
Query: 7 FEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--------YP 56
F F ++R +++ + FVAKDVA++L Y N +A+ + G K Y
Sbjct: 34 FRFGEDVFRLRYVLND--PVKFVAKDVASSLKYVNCKQAVIVNVDGKYKSTFEHESTPYT 91
Query: 57 LKTEGGIQK---------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L ++G ++ +I++ V +L++KS LP A + + W+ EEV+P + TG Y
Sbjct: 92 LASDGAARQGDPLYLHPHTVLITKEGVIQLIMKSKLPYAVELQAWLLEEVIPQVLCTGKY 151
Query: 108 ----SVEAPKLRATSASTV-LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+V A +++ S + + K L +++ L+++Q+ +K + + I +L
Sbjct: 152 QTAVAVNASLVQSQSKDEIQIATLKVLNQMSVSLQLRNDQIKIKDEQIINLIAENKRLTG 211
Query: 163 MDIK 166
I
Sbjct: 212 AIIN 215
>gi|134287196|ref|YP_001110892.1| Bro2 [Heliothis virescens ascovirus 3e]
gi|133722104|gb|ABO37226.1| Bro2 [Heliothis virescens ascovirus 3e]
Length = 352
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 18/156 (11%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
MS +T +F ++ T +D + W VA A AL Y N AI K +
Sbjct: 1 MS-LTKIQFGDKEVETYTIDLNGEKWMVANPFAEALSYSNCKNAITKFVTTKNQKNYEEI 59
Query: 58 KTE-------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
K+ K + I+ V+ L+ S +P A++F+ W ++LP+L +
Sbjct: 60 KSPHTEATKIVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPSLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD 140
G Y + A + VH + A +KD
Sbjct: 120 GEYKMVRDA-PVDIAHGMNAVHVATNDGADAPWIKD 154
>gi|113195505|ref|YP_717643.1| BRO-B [Clanis bilineata nucleopolyhedrosis virus]
gi|94959046|gb|ABF47446.1| BRO-B [Clanis bilineata nucleopolyhedrosis virus]
Length = 339
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 1 MST---ITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR- 54
MS+ I F+F ++ ++R +V++ + + FVAKDVA+ L ++N+ +A+ H K
Sbjct: 1 MSSCVKIGNFKFGEDTFRLRYVVER-EIVKFVAKDVASNLKHQNTKKAVKDHVDEKYKST 59
Query: 55 ---------------YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ +I++ V +L++KS LP A + + W+ EEV+P
Sbjct: 60 YEMGKEVVTSNLEPVNKGDSLYLQPHTILITKEGVIQLIMKSKLPYAVELQAWLLEEVIP 119
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+ TG Y+ S +L +K + +L++ N+ V K
Sbjct: 120 QVLCTGKYAPAVEMDTDIQESKILNTYKQDIAEKDEKIQNLTTVLIETNQQVVK 173
>gi|9631081|ref|NP_047751.1| Ld-bro-j [Lymantria dispar MNPV]
gi|81981594|sp|Q9YML3|BROJ_NPVLD RecName: Full=Uncharacterized Bro-N domain-containing protein J;
AltName: Full=Ld-bro-j
gi|3822349|gb|AAC70300.1| Ld-bro-j [Lymantria dispar MNPV]
Length = 403
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 28/208 (13%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
MS + F+F ++ +R ++ +Q + FVAKD+A+ L + N EA+ H G K
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLGGEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKSTF 60
Query: 57 LKTEGG-----------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
E ++++ V +L++KS LP A + + W+ EEV+P
Sbjct: 61 EHGEIRSHLASNALAKQGDPLYLHPHTVLVTKEGVIQLIMKSKLPYAVELQAWLLEEVIP 120
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ TG Y P ++ T + ++ L+ K + ++
Sbjct: 121 QVLCTGKYD---PAIKHQQEETKRMTDRLIKVFTDHTTTLHAALVKKEKFVEFVVESNNK 177
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLN 187
K + + D +T++ LN
Sbjct: 178 QIEAKNKLIEAKDQ----HVTRVMTDLN 201
>gi|306841810|ref|ZP_07474493.1| BRO family protein [Brucella sp. BO2]
gi|306288091|gb|EFM59485.1| BRO family protein [Brucella sp. BO2]
Length = 203
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 24 IWFVAKDVATAL-----GYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLL 78
WFV D+ L G+ ++ + + K KR L + G + + +++E +Y+L+
Sbjct: 2 PWFVGADLVEILYGRTSGFSHALDKVPVAEKSYVKRTTLGMKPG-RGITLLNEAGMYKLV 60
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGL 138
+KS P A+ F+ WV VLP +RK G Y K+ A L L ++ +
Sbjct: 61 LKSRKPEAKAFQDWVTGTVLPAIRKDGLYVRGEEKVSAGEMDLEELTLITLTRLQEK--M 118
Query: 139 KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQR-ARFLNK 197
K + + + K + + + +HL DE+ ++ + + +R
Sbjct: 119 KRLKEEKEAAEALAKFS-----QGIITEHLEYVTMDEWRALSHLYLPHGMKTKLSRKAAV 173
Query: 198 LLLKRGLQVSKVSGG 212
L +RG++V K +
Sbjct: 174 LCRERGIEVKKQTRE 188
>gi|225575267|ref|ZP_03783877.1| hypothetical protein RUMHYD_03356 [Blautia hydrogenotrophica DSM
10507]
gi|225037560|gb|EEG47806.1| hypothetical protein RUMHYD_03356 [Blautia hydrogenotrophica DSM
10507]
Length = 107
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 2 STITPFEFESN-KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKT 59
+ + FE E K+RTI+ D WFV KDVATALGY+++++A+ H + K
Sbjct: 3 NDLQIFENEEFGKVRTII-IDGESWFVGKDVATALGYKDTSDALKRHVQYDDKLTRYFTD 61
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEE 96
G +++ +++E +Y L+ S ++++ F E
Sbjct: 62 SGQSREMYVVNESGLYALIFGSNFVKIPEYQQLKFFE 98
>gi|115298581|ref|YP_762434.1| 40.2 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
gi|21668332|emb|CAC84478.1| AV1-BRO-17 protein [Spodoptera frugiperda ascovirus 1a]
gi|114416848|emb|CAL44679.1| 40.2 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
Length = 363
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 26/222 (11%)
Query: 3 TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----- 55
++ F S ++ T+VD W A A ALGY N N+A+ H ++
Sbjct: 2 ALSKVNFAGRSLEVFTVVDSTGEKWHQANPFADALGYNNVNKAVRTHVSEENQKNYDCFE 61
Query: 56 --------------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
++ K + I+ V+ L+ S +P+A++F W ++LPTL
Sbjct: 62 SAHGGSTCGLTDESSVRPPSIQAKTKFINTAGVFELINASEMPAAKRFRTWENNDLLPTL 121
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
G Y++ A A + VH + A ++D L+++ + + + +
Sbjct: 122 CHEGEYNM-AKDAPTDIAVGMNAVHAATNDGADAPWMRD---LVELKASIVEKDEIIKSV 177
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLNPPQRAR-FLNKLLLKR 202
+ L + + + E+L A NK L++
Sbjct: 178 TRENNELSVALRTATDKLKESNEKLVTFATALIECNKGLVEA 219
>gi|134287305|ref|YP_001111001.1| Bro18 [Heliothis virescens ascovirus 3e]
gi|133722213|gb|ABO37335.1| Bro18 [Heliothis virescens ascovirus 3e]
Length = 236
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 22/158 (13%)
Query: 20 KDQN-IWFV--AKDVATALGYENSNEAINAHC-----------KGVAKRYPLKTEGGIQ- 64
+D F+ A +A LGY+ A+ H KG PL Q
Sbjct: 25 RDGKDPLFMVSAHGIAELLGYKQPAHAVKKHVRPKHRKTWEEIKGCMIHTPLDVPPNWQP 84
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
I+EP +Y L +S LP A++F+ W++E+VLP++R+TGSY++ + ++V
Sbjct: 85 NTVFITEPGIYALCDRSRLPEAEEFQDWIYEDVLPSIRRTGSYNIH-----DRNGTSVAE 139
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
K L + Q L QLL+ + G + +
Sbjct: 140 YDKKLADG--QIELMKAQLLVANLQTQLSNHGAEITQT 175
>gi|327198723|emb|CCA61424.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 329
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYP--------- 56
F F+ N ++ + DQ WF AKDV LGY + H K V +Y
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDKGIVKTHINKYVPDKYKKPLGAICQG 92
Query: 57 ------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 GIRGVYHPINGNDAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AME 149
Query: 111 APKLRATSASTVLRV-----HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
R T+ LR+ + L+EL ++ Q L K+ ++ ++
Sbjct: 150 TILNRNTTLENSLRLVIKQNDEQLKELV-SVRTQNTQALAKLAEMGIQLNETNEQLNEMN 208
Query: 166 KHLPSSDNDE 175
L + D
Sbjct: 209 NKLDVAVEDR 218
>gi|327198688|emb|CCA61389.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 320
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH----CKGVAKRYPLKT--- 59
F F+ N ++ + DQ WF AKDV LGY + + I H KR L
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSDDIKNIKTHIYKYVPDKYKRALLDIIGC 92
Query: 60 EGGIQKVRI-------ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
G Q + I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 RGSNQSLTYQEGREIYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AMETI 149
Query: 113 KLRATSASTVLRV-HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
R T T LR+ K L + + N+L + ++++ +
Sbjct: 150 LNRNTVLDTNLRLVVKELVAVRSENKEALNRLAQMGIQLNETNEQLNEMNNKLDVAVEDR 209
Query: 172 DN 173
Sbjct: 210 AP 211
>gi|327198690|emb|CCA61391.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 353
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 29/197 (14%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---------------HCKG 50
F FE+N ++ + + WF AKDV LGY ++ I KG
Sbjct: 51 VFSFENNIVKMVGTF-EQPWFRAKDVLKVLGYSDARNTIKNQIHKYIPEKYKLVYEEIKG 109
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK
Sbjct: 110 GLLRVDHPVNGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRK------- 162
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
+ T+L + LE + ++N LL + + ++ V + L
Sbjct: 163 ------QAMETLLDHNSSLENNLRLVIRQNNALLNQNEEQLKELVAVRNQNDAALNRLAD 216
Query: 171 SDNDEYLTITQIGERLN 187
T Q+ E N
Sbjct: 217 MGIQLNETNEQLNEMNN 233
>gi|37651365|ref|NP_932710.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
gi|37499274|gb|AAQ91673.1| baculovirus repeated ORF [Choristoneura fumiferana DEF MNPV]
Length = 339
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 21/201 (10%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------------R 54
F ++ T+ D + W +A A AL Y N+AI C+ V+K R
Sbjct: 8 FVNGPLEVFTVADDKRENWMIANPFAEALNYSRPNKAI---CEKVSKENVKTLEELRSHR 64
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T + + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y++ A
Sbjct: 65 CGAITSSLHPQTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNM-AVDA 123
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
A + VH + + +KD + + + +E D+ +D +
Sbjct: 124 PVEIAEGMNAVHAAVNNGQQAPWVKDLEFYKD-----ELVKRDNAIEKRDMAIAAKNDEN 178
Query: 175 EYLTITQIGERLNPPQRARFL 195
+ LT LN + + L
Sbjct: 179 QRLTTALQAANLNLVEANKGL 199
>gi|9630998|ref|NP_047668.1| Ld-bro-a [Lymantria dispar MNPV]
gi|3822266|gb|AAC70217.1| Ld-bro-a [Lymantria dispar MNPV]
Length = 350
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 14/193 (7%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK---------RYPL 57
F ++ T+ D Q W A A L Y N N AI H + R L
Sbjct: 8 FVNGPLEVFTVQDDKQENWMAANPFAETLKYLNVNRAIRVHVSKHNQKTLDELQSDRNGL 67
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T + + I+ V+ L+ S +P+A++F++W ++LP+L + G YS+ +
Sbjct: 68 ITSSLHPQTKFINRAGVFELISASEMPAAKRFKQWNANDLLPSLCREGEYSMSKDA-PSD 126
Query: 118 SASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
A + VH + + D L K + + + + + + L S+
Sbjct: 127 IAQGMNAVHAATNQGREAPWATDLEFYKSALAKKDDIIVEKDKIIVAKTEQNQQLASALQ 186
Query: 174 DEYLTITQIGERL 186
+ + + + L
Sbjct: 187 EANQNLIEANKGL 199
>gi|209401113|ref|YP_002273982.1| baculovirus repeated ORF a [Helicoverpa armigera NPV NNg1]
gi|209364365|dbj|BAG74624.1| baculovirus repeated ORF a [Helicoverpa armigera NPV NNg1]
Length = 361
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 23/176 (13%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS +T +F ++ T VD + W VA A AL Y +N+AI +R +
Sbjct: 1 MS-LTKIQFGDKEVETYTVDFNGEKWMVANPFAEALDYSRANKAIFEKVSAENQRTYDQI 59
Query: 60 EGGIQ----------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
K + I+ V+ L+ S +P A++F+ W ++LPTL +
Sbjct: 60 RSHRISATDCVTSPLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPTLCQ 119
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKIT 155
G Y + A A A + VH E +KD +++ +R + +T
Sbjct: 120 EGEYKM-ARDAPANIAHGMNAVHVATNEGVAAPWMKDLDHLKTAIVEKDRKIDDLT 174
>gi|126699913|ref|YP_001088810.1| putative phage-related regulatory protein [Clostridium difficile
630]
gi|115251350|emb|CAJ69182.1| putative phage-related regulatory protein [Clostridium difficile]
Length = 121
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKV- 66
FE +I + + + I F +KDVA L +N NE I + K V K +
Sbjct: 8 FEGKEIE-VFEFEGRILFNSKDVANCLDIKNVNENIILMNEKQVVKLRNSDISNTDIRKL 66
Query: 67 -----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 67 NNAGENFLTESGVYKLIFKSRKEEAERFQDWISDEVLPSIRQTGAYITN 115
>gi|285002331|ref|YP_003422395.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343591|gb|ACH69406.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 498
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 43/216 (19%)
Query: 8 EFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-------- 58
F + + + WF+A AT L Y SN+A+ H +R
Sbjct: 7 SFAGQDVMVYTLQSEGQKWFLANPFATILNYARSNKAVATHVSSQNQRLLCDLTKHGADD 66
Query: 59 ----------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
T + + I++ ++ L+ S P AQ+F +WV ++LP L TG Y
Sbjct: 67 VIRAHHCGALTSSLHPQTKFINQAGLFELIQGSKTPKAQEFRQWVSSDLLPKLCNTGVYD 126
Query: 109 VE-APKLRATSASTVLRV--------------HKHLEELAKQAGL----KDNQLLLKVNR 149
++ AP + V +V K+ +ELA ++ + KDN++++K N
Sbjct: 127 MQTAPVEQQQQMMAVHQVTNNGTNAAWSLEDYQKNYKELATKSKVMLLEKDNEIMVKTNE 186
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGER 185
++ ++++ M+++H EY + E
Sbjct: 187 LMS-----NKMQTMELQHNYERQIMEYKNAIKEMEM 217
>gi|327197615|ref|YP_004301306.1| gp30 [Brochothrix phage NF5]
gi|296245438|gb|ADH03052.1| gp30 [Brochothrix phage NF5]
Length = 257
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/248 (20%), Positives = 93/248 (37%), Gaps = 30/248 (12%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALG---YENSNEAINAHCKGVAKRYPLKTEGGI 63
F+ ++ + ++ N F A+ VA +LG ++ E + + + +
Sbjct: 6 FKNNLFQLE-VKTENGNALFDAETVARSLGFVEIKHGKEYVR--WRTINGYLKKYLSQEV 62
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SASTV 122
K ISE VY+L K+ A+KF+ W+ EVLP++RK G+Y + T + +++
Sbjct: 63 AKNDFISESMVYKLAFKANNSLAEKFQDWLASEVLPSIRKHGAYLTDEKAYDITHNPNSL 122
Query: 123 LRVHKHLEELAKQAGL-----------------KDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ + E +Q L +L+ + K GVD
Sbjct: 123 ADILQQASEQLRQKDLVIEEMKPKALFADAVSTSQTTILVGELAKLLKQNGVDIGATRLF 182
Query: 166 KHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKR-GLQVSKVSGGYRPTPKGEERG 223
K L + I + G N P Q++ + +K +Q S T K +G
Sbjct: 183 KWLRDNQ----FLINRRGSDWNMPTQKSMNMKLFQIKETNIQHSDGHVSISKTAKVTGKG 238
Query: 224 GKMCDVPM 231
+
Sbjct: 239 QQYFINKF 246
>gi|15838160|ref|NP_298848.1| hypothetical protein XF1559 [Xylella fastidiosa 9a5c]
gi|9106602|gb|AAF84368.1|AE003985_9 hypothetical protein XF_1559 [Xylella fastidiosa 9a5c]
Length = 115
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 8/117 (6%)
Query: 136 AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND-EYLTITQIGERLNPPQRARF 194
G+K + T + E + LP+ L TQ+G+RL+ A+
Sbjct: 2 PGVKPGIAAAATLACIKSNTNLTTEEIR--RALPALQEPLCLLNATQLGKRLH--CSAKA 57
Query: 195 LNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
+N+LL RG Q + T G G +P S+ QL WN +++
Sbjct: 58 VNQLLASRGFQFRNERDEWELTEAGRVWGEA---IPYSRNGHSSYQLLWNPDVIACL 111
>gi|285002433|ref|YP_003422497.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343693|gb|ACH69508.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 473
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 33/220 (15%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK------- 65
++ + ++ + +A LGY A+ H K ++ + +G + +
Sbjct: 16 EVWIVEVENDKFMYGGHGIAQFLGYVKPRNALQQHVKPAWRKNWEEIKGALNQGPLVTSL 75
Query: 66 ------------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
ISE VY L+++S LP+A++F+RW+FEEVLP +R TG Y+ +
Sbjct: 76 AQDNIPVNWQPNTVFISEAGVYALIMRSKLPAAEEFQRWLFEEVLPEIRNTGKYAHKEKD 135
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ L +E L + L + + + Q+ +
Sbjct: 136 FNVVNYDKKL-ADAQIEALQLKLDLSVAKHNHDIAMSEMQRNYERQIAEYKERE------ 188
Query: 174 DEYLTITQIGERL----NPPQRARFLNKLLLKRGLQVSKV 209
+ I + L N ++ LL + ++ ++
Sbjct: 189 ---YKLQMILKDLSVKANMTMMQFGVSTLLAQDNIKQNEE 225
>gi|78357846|ref|YP_389295.1| prophage antirepressor-like [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220251|gb|ABB39600.1| Prophage antirepressor-like protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 105
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 11 SNKIRTIV-DKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
+R + + IWFVAKDV AL +++ P++ ++ V II
Sbjct: 18 FGTVRVLKGEGGGEIWFVAKDVCDALTI-DTSNLSKLLDDDERSTCPVQYTDQVRAVSII 76
Query: 70 SEPDVYRLLVKSTLPSAQKFERW 92
+E +Y L+++S P A++F++W
Sbjct: 77 NESGLYSLILRSRKPEAKRFKKW 99
>gi|15320902|ref|NP_203412.1| CUN108 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
gi|15278364|gb|AAK94186.1|AF403738_108 CUN108 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
Length = 601
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 41/195 (21%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINA-----------------HCKGVAKRYP------ 56
++ +W V K+VA +LGYE NEA++ H G+ K P
Sbjct: 155 ENGEVWVVGKEVAKSLGYEKPNEALDKVANVFKKPLCELATTSTHRDGLEKTPPPIPMQT 214
Query: 57 ----------------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
K G + ++ +++E V +L+++S LP+A+++++WV VLP+
Sbjct: 215 DESELSDDGVGEEVEVPKLPGHLGRLVMLNEGGVQQLILESRLPNAKRYKQWVCGTVLPS 274
Query: 101 LRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+RKTG Y +L S R+ + LE A + + +L + + KI +L
Sbjct: 275 IRKTGRYE-RTMELEPKSCGDNSRI-ELLETKLALAESRSSLILAESRNALFKIEAEREL 332
Query: 161 EAMDIKHLPSSDNDE 175
E ++ E
Sbjct: 333 ERRSMEAERDKIEVE 347
>gi|118197557|ref|YP_874269.1| Bro-a [Ecotropis obliqua NPV]
gi|113472552|gb|ABI35759.1| Bro-a [Ecotropis obliqua NPV]
Length = 326
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 19/169 (11%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-------KGVA 52
MS +T F ++ T VD D W VA A AL Y + AI
Sbjct: 1 MS-LTKVHFGDKEVETYTVDVDGEKWMVANPFAEALSYSIPHIAIAKFVTIKNQKSYDEI 59
Query: 53 KRYPLKTEGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
K + G K + I+ V+ L+ S +P A++F+ W ++LPTL +
Sbjct: 60 KSIRTASSAGESSVIPRNIQAKTKFINRAGVFELINASDMPGAKRFKAWNTNDLLPTLCQ 119
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVT 152
G Y + A A A + VH + + LK+ + N +T
Sbjct: 120 EGEYKM-AKDAPADIAHGMNAVHVATNDGKEAPWLKEIIQYKEENHKLT 167
>gi|327198766|emb|CCA61467.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 343
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC----------------KG 50
F FE N ++ + DQ WF AKDV LGY I K
Sbjct: 34 FSFEDNTVKMVGTLDQ-PWFRAKDVLKVLGYSEDKTTIKNRVHRQVPDKYKRSLGEIYKR 92
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
R G K I+EP +YRL+++S P+AQ F+ +V + +LP +RK ++E
Sbjct: 93 GPHRGDHPVNGNEAKEVYINEPGLYRLIMRSNKPNAQPFQDYVQDVLLPNMRKQ---AME 149
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLL 144
R T+ T LR+ ++EL + QL
Sbjct: 150 TILNRNTALDTNLRLV--VKELVAVRNQNEEQLK 181
>gi|134287199|ref|YP_001110895.1| Bro5 [Heliothis virescens ascovirus 3e]
gi|133722107|gb|ABO37229.1| Bro5 [Heliothis virescens ascovirus 3e]
Length = 354
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 83/215 (38%), Gaps = 22/215 (10%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ + F +I ++ D +W +A A L Y N+ AI +
Sbjct: 4 MAVVKVNFNDRELEIISVKDDAGKLWMLANPFARILEYSNAPNAITKFVSNSNQINYESI 63
Query: 56 -------PLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T +Q K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y
Sbjct: 64 KSPRCGETCMTSSCVQAKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKY 123
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQLEAM 163
+ A A + VH + A +KD +++ ++ + I+ ++ ++
Sbjct: 124 DM-ATDAPVGIAMGMNAVHAIANDGADAPWMKDLHELRTAVVQKDKIIEAISYENKELSL 182
Query: 164 DIK----HLPSSDNDEYLTITQIGERLNPPQRARF 194
++ L +++ + + E N +A
Sbjct: 183 SLRTSNEKLQGANDKLMYFASALVESNNGLMKANE 217
>gi|116326849|ref|YP_803387.1| hypothetical protein TNAV2c_gp165 [Trichoplusia ni ascovirus 2c]
gi|102231857|gb|ABF70680.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 353
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 22/175 (12%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPLK 58
MS +T +F + T V+ W VA A AL Y N+AI G K +
Sbjct: 1 MS-LTKVQFGDKDVETYTVEVGGEKWMVANPFAEALNYRKPNKAILEKVSDGNQKTFDQI 59
Query: 59 TEGGIQ--------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
K + I+ V+ L+ S +P A++F+ W ++LP+L +
Sbjct: 60 KPFRFSTTDCATSLPRNIQAKTKFINRAGVFELINASDMPGAKRFKAWNNNDLLPSLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKIT 155
G Y++ A A + VH E A+ +KD +++ +R + +T
Sbjct: 120 GEYNMVRDA-PADIAHGMNAVHVATNEGAEAPWMKDLEHLKTAIVEKDRKINDLT 173
>gi|168187641|ref|ZP_02622276.1| anti-repressor [Clostridium botulinum C str. Eklund]
gi|169294479|gb|EDS76612.1| anti-repressor [Clostridium botulinum C str. Eklund]
Length = 245
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/241 (19%), Positives = 95/241 (39%), Gaps = 25/241 (10%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
+ +FVA +VA LG + + + + G ++ +++E +Y L+KS
Sbjct: 25 EEPYFVANEVAIWLGERDGSTVARKVDDDEKLIHTICVTGQNRETTMLTEDGLYEALMKS 84
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDN 141
A+ ++ + ++ L +RKTG ++K+ + +
Sbjct: 85 RKEIAKPLKKKI-KQYLKQIRKTGG--------AVEDGREEEFIYKYFPSFSDDVKMSMV 135
Query: 142 QLLLKVNRGV-TKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLL 200
Q LLK N+ + K D++ + + + LT + I + LN AR LN LL
Sbjct: 136 QDLLKSNKELKPKADYHDKVLNPTDE-----NFKKLLTTSDIAKDLN--MSARKLNSLLH 188
Query: 201 KRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSN----LLVSFLQNEL 256
+ + + + P + ++ + D HV Q LK+ ++ + E+
Sbjct: 189 EFHIIYKQ-GKTWMPYAEYQDMIPEYFD---YHVSEYGQVLKYTEKGRKWIIELLKEKEI 244
Query: 257 I 257
I
Sbjct: 245 I 245
>gi|325840440|ref|ZP_08167039.1| phage antirepressor protein [Turicibacter sp. HGF1]
gi|325490307|gb|EGC92636.1| phage antirepressor protein [Turicibacter sp. HGF1]
Length = 268
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/236 (20%), Positives = 89/236 (37%), Gaps = 32/236 (13%)
Query: 23 NIWFVAKDVATALGYENS--NEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
F+AKDVA + Y+ S N+ + + EG +++ ++E VY +L++
Sbjct: 34 KPMFLAKDVAEWIAYDTSSLNKMLKNVEDEEKVNGIIFREGQHREMWFLTEDGVYEVLMQ 93
Query: 81 STLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD 140
S P A+ F++ V +E+L +R+ G Y+ + + +++V L+E +
Sbjct: 94 SRKPIAKAFKKKV-KEILKEIRQHGMYARDELL---DNPDLLIQVASKLKEEREMRK--- 146
Query: 141 NQLLLKVNRGVTKITGVDQLE--------------------AMDIKHLPSSDNDEYLTIT 180
QL +K+ K+ D L ++ L + D I
Sbjct: 147 -QLEIKIQAQAPKVLFADALTISQSSILVGELAKLIHQNGISIGQNRLFTWLRDHGYLIK 205
Query: 181 QIGERLN-PPQRARFLNKLLLKRGLQVSKVSG-GYRPTPKGEERGGKMCDVPMQHV 234
+ G N P QRA L +K G ++ T K +G
Sbjct: 206 KRGNDYNMPTQRAMNLGLFEIKEGTRIHSDGHVSITKTSKVTGKGQVYFINKFLEN 261
>gi|285002442|ref|YP_003422506.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343702|gb|ACH69517.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 351
Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 21/201 (10%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ + F ++ + D +W +A A L Y +N+AI H +
Sbjct: 1 MAVVKVQFANSDLEVISSKDDSGELWMLANPFARILEYSKANDAIRQHVSHCNSKNYEEI 60
Query: 56 -------PLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
T +Q K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y
Sbjct: 61 RSRQFVATHVTSSSVQAKSKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKY 120
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQ---L 160
+ A A + VH + A+ L+D Q+++K + + ++ +
Sbjct: 121 DM-AVDAPIEIAHGMNAVHVATNDGAEAPWLRDLSELKQVIVKKDELIAIKDEENKKLTV 179
Query: 161 EAMDIKHLPSSDNDEYLTITQ 181
D + N+ +T++Q
Sbjct: 180 ALQDANQSLAVANNALITLSQ 200
>gi|68304250|ref|YP_249718.1| BRO-D [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973079|gb|AAY84045.1| BRO-D [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 429
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 19/164 (11%)
Query: 49 KGVAKRYPLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K + Q ISE VY L++KS LP+A++F+RW+FEEVLP LRKTG Y
Sbjct: 12 KDETTSAESQLPANWQPNTVFISEAGVYALIMKSKLPAAEEFQRWLFEEVLPELRKTGKY 71
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
S+ V+ + L E A ++ QL L++++ T I D + +H
Sbjct: 72 SIPTTAN-------VVNYDRQLAE----AQMESLQLKLELSQANTTIAKYDASISEMKRH 120
Query: 168 LP-------SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGL 204
+ L + + + N +N LL K +
Sbjct: 121 YENQMSEYKEREYKMQLLMKDMATQANMSMTQFAVNALLAKDNI 164
>gi|134300461|ref|YP_001113957.1| BRO domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134053161|gb|ABO51132.1| BRO domain protein [Desulfotomaculum reducens MI-1]
Length = 205
Score = 98.5 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 13/189 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + + +KIR + + + W VA D+A AL Y + + + + T
Sbjct: 1 MN-VKTEIWNGHKIRFVEKEPGDWWAVAADIAKALEYRRIDSMLRKLKPSQKDTHLMSTL 59
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG---SYSVEAPKLRAT 117
GG Q+V IISE +Y+++ +S A++FE W+F V+ TLR+ + + +
Sbjct: 60 GGQQEVSIISETGIYKVITRSRKKEAEQFEDWIF-TVIKTLRQASGLEGFQIFRMLDKEH 118
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ R+ L + + +K N + N+ V+ I G ++ D +
Sbjct: 119 QREAMSRLKAGLVKPVRVDFIKANTI---ANKAVSSIHGYPKMLKKGD-----MSPDMLI 170
Query: 178 TITQIGERL 186
QI +
Sbjct: 171 QRQQILDDT 179
>gi|325152617|gb|ADY88154.1| BRO-B [Helicoverpa armigera SNPV]
gi|325152620|gb|ADY88156.1| BRO-B [Helicoverpa armigera SNPV]
Length = 145
Score = 98.5 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 3 TITPFEFESNKIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------- 53
+T +F ++++ I D + +W +A A L Y N+ +AI+ + + +
Sbjct: 2 AVTTVQFANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVEINNQKILESIQ 61
Query: 54 --RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-- 109
R T K + I+ ++ L+ S +P A++F W+ ++LP L G Y +
Sbjct: 62 SARLGQITSSLHPKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDDGKYDMAT 121
Query: 110 EAPKLRATSASTVLRVHKHLEEL 132
+AP A + V + +E
Sbjct: 122 DAPVGIAMGMNAVHAITNEGKEA 144
>gi|9635409|ref|NP_059307.1| ORF159 [Xestia c-nigrum granulovirus]
gi|6175803|gb|AAF05273.1|AF162221_159 ORF159 [Xestia c-nigrum granulovirus]
Length = 408
Score = 98.5 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG------ 62
E + T VD+ W VA AT L Y N+A+ H +
Sbjct: 52 NEELNVITQVDEFGEPWMVANPFATVLQYYKPNDAVRKHVSEWNVKSYEDFRSRRIGADD 111
Query: 63 ------------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV- 109
K + I+ ++ L+ S +P AQ+F+ WV ++LP L + G Y++
Sbjct: 112 SSHWVDEITSSLHPKTKFINRAGLFELIQSSRMPKAQEFKNWVNSDLLPKLCQEGEYNMA 171
Query: 110 -EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ----LLLKVNRGVTKIT 155
+AP A + V V E LKD + +++ +R + +T
Sbjct: 172 KDAPVDVALCMNAVRAVTNDGREA---PWLKDMECLKTAIVEKDRKIEDLT 219
>gi|327198660|emb|CCA61361.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 310
Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYP--------- 56
F F+ N ++ + DQ WF AKDV LGY + + K V +Y
Sbjct: 34 FSFDDNSVKMVGTLDQ-PWFRAKDVLKVLGYSEDSHTLKKQIQKYVPDKYKQQLGGLRDG 92
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
G K I+EP +YRL+++S P++Q F+ +V + +LP +RK ++E R
Sbjct: 93 GHPINGNEAKEVYINEPGLYRLIMRSNKPNSQPFQDYVQDVLLPNMRKQ---AMETLLNR 149
Query: 116 ATSASTVLRV--HKHLEELAKQAGL 138
TS LR+ ++ + LAK A +
Sbjct: 150 NTSLENNLRLVIRQNTQALAKLAEM 174
>gi|258511151|ref|YP_003184585.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477877|gb|ACV58196.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 149
Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
++R + D WF A V A+G N +AI + GG +++ ++
Sbjct: 10 NGAQVR-VFWVDGEPWFDAVGVCEAMGLRNIEKAIRRLDDDEKGLVTVDNAGGREEILVV 68
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLP-TLR 102
E + RL + P A+ F+RWV EVLP +R
Sbjct: 69 RESGMLRLALAGREPHARAFQRWVVREVLPLAIR 102
>gi|94995297|ref|YP_603395.1| phage antirepressor protein [Streptococcus phage 10750.4]
gi|94548805|gb|ABF38851.1| phage antirepressor protein [Streptococcus phage 10750.4]
Length = 212
Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 10/162 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + + IR + + W VAKD+ ALG + + AI+ KGV K L T+G
Sbjct: 7 NLLRTETWNGYTIRFV-EHQGEWWAVAKDITNALGLKQPSRAISTL-KGVTKSKTL-TKG 63
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT-GSYSVEAPKL--RATS 118
G Q++ II+E D+YRL+ KS P A+ F+ WVF E + LR++ G + ++ +
Sbjct: 64 GEQELSIINEKDIYRLVFKSRKPEAEAFQEWVF-ETIKQLRQSIGLEGFQVFRMFDKEHQ 122
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ R+ L+ K+ +K N + N+ V+ + G ++
Sbjct: 123 KQAMNRLVNCLQNATKKDLIKANTI---ANKAVSDLYGYPKM 161
>gi|209170952|ref|YP_002268098.1| BRO-B [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436543|gb|ACI28770.1| BRO-B [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 331
Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ + F E+ +I ++ D++ +W +A A L Y N+ +AI+ + ++
Sbjct: 1 MAVVKVQFANENVEIVSVRDENDQLWLLANPFARILEYSNAPKAISTYVTEKNQKCLEQM 60
Query: 56 -------PLKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ T IQ K + I++ ++ L+ S +P AQ+F WV ++L L G Y
Sbjct: 61 QSAQLGKTILTSSSIQAKSKFINKAGLFELIQASRMPKAQEFRNWVNSDLLVKLCDGGEY 120
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
S+ A+ A + +HK + +KD +LK +I D+ + +
Sbjct: 121 SMRTDA-PASVAEGMNVLHKATNNGDEAPWMKDMDGILK------EIEKRDETINILTRD 173
Query: 168 LPSSDNDEYLTITQIGE 184
L +++ + +I +
Sbjct: 174 LRTANQNLMEFAKEIIK 190
>gi|325152622|gb|ADY88157.1| BRO-A [Helicoverpa armigera SNPV]
Length = 137
Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKR 54
MS +T +F ++ T VD D W VA A AL Y +N+AI K +
Sbjct: 1 MS-VTKIKFGDKEVETYTVDFDGEKWMVANPFAEALNYSRANKAIFDKVSVKNQKSFEQI 59
Query: 55 YPLKTEGG---------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
P ++ G + I+ V+ L+ S +P A++F+ W ++LP+L + G
Sbjct: 60 NPHRSSAGESSVIPRNMKPNTKFINRAGVFELINASDMPGAKRFQVWNNNDLLPSLCQEG 119
Query: 106 SYSV--EAPKLRATSA 119
Y + +AP A
Sbjct: 120 EYKMARDAPADIAHKM 135
>gi|77747691|ref|NP_779546.2| hypothetical protein PD1349 [Xylella fastidiosa Temecula1]
Length = 160
Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 9/134 (6%)
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
+ LR L K A + + + T +T + A+ P L
Sbjct: 32 DWNAALRAETPPPALDKPAARAEPAVTAACIKSNTNLTTEEIRRALPALQEPLC----LL 87
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGS 237
TQ+G+RL+ A+ +N+LL RG Q + T G +P S
Sbjct: 88 NATQLGKRLH--CSAKTVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IPYSRNGHS 142
Query: 238 TQQLKWNSNLLVSF 251
+ QL WN +++
Sbjct: 143 SYQLLWNPDVIACL 156
>gi|299472848|emb|CBN80417.1| EsV-1-117 [Ectocarpus siliculosus]
Length = 513
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 1 MSTITPFEFESNK-IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M + F F++ + + I D F A + +G + ++ + + T
Sbjct: 1 MDVLKTFVFDNTEHVVDIQVVDDKPMFKADQIGKIIGLKQMRSSVRHFDRDEKVVQRMHT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
GG Q ++E YRLL++S P A+ F++WV V+ T+R+TG Y +
Sbjct: 61 RGGEQDCTFLTEMGAYRLLMRSDKPMARPFQKWVAH-VIATIRETGKYELSK 111
>gi|255307315|ref|ZP_05351486.1| putative phage-related regulatory protein [Clostridium difficile
ATCC 43255]
Length = 121
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKV- 66
FE +I + + + I F +KDV L +N NE I + K V K +
Sbjct: 8 FEGKEIE-VFEFEGRILFNSKDVVNCLDIKNVNENIRLMNEKQVVKLRNSDISNTDIRKL 66
Query: 67 -----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 67 NNAGENFLTESGVYKLIFKSRKEEAERFQGWISDEVLPSIRQTGAY 112
>gi|255101442|ref|ZP_05330419.1| putative phage-related regulatory protein [Clostridium difficile
QCD-63q42]
Length = 121
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN-AHCKGVAKRYPLKTEGGIQKV- 66
FE +I + + + I F +KDV L +N NE I + K V K +
Sbjct: 8 FEGKEIE-VFEFEGRILFNSKDVVNCLDIKNVNENIRLMNEKQVVKLRNSDISNTDIRKL 66
Query: 67 -----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++E VY+L+ KS A++F+ W+ +EVLP++R+TG+Y
Sbjct: 67 NNAGENFLTESGVYKLIFKSRKEEAERFQGWISDEVLPSIRQTGAY 112
>gi|20070001|ref|NP_613205.1| BRO-f [Mamestra configurata NPV-A]
gi|20043395|gb|AAM09230.1| BRO-f [Mamestra configurata NPV-A]
Length = 357
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 96/251 (38%), Gaps = 36/251 (14%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--NAHCKGVAKRYPLK------- 58
+F+++K+ WF A + A +GY+ + I K K
Sbjct: 23 DFDNDKV--------QFWFAASEFARCMGYQRPDNIILEKIDLKYRKKYEQFHVPETKGI 74
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEAPK--- 113
T ++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 75 TSSTHPHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKMDTAAAPT 134
Query: 114 --LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ + + + +++ L + N ++ K + + ++ A + +
Sbjct: 135 NGNDVNTVALLQTISQNIVCLKEDNDYLRNAIVRKDEQLHENQQMMQKICAEKDELIQKI 194
Query: 172 DNDEYLTITQIGERLN---------PPQRARFLNKLLLKRGLQVSKV---SGGYRPTPKG 219
+ I ++ +N ++ L K + V KV S P
Sbjct: 195 VVHKDQQINRVMADMNRMYTGFQDTMQKKDEILQKKDEQVSSLVEKVIDLSDRAVEYPVS 254
Query: 220 EERGGKMCDVP 230
E++ +C
Sbjct: 255 EKKQPILCIAK 265
>gi|33331833|gb|AAQ11141.1| BRO-F [Mamestra configurata NPV-A]
Length = 357
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 96/251 (38%), Gaps = 36/251 (14%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI--NAHCKGVAKRYPLK------- 58
+F+++K+ WF A + A +GY+ + I K K
Sbjct: 23 DFDNDKV--------QFWFAASEFARCMGYQRPDNIILEKIDLKYRKKYEQFHVPETKGI 74
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEAPK--- 113
T ++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++
Sbjct: 75 TSSTHPHTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKMDTAAAPT 134
Query: 114 --LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
+ + + + +++ L + N ++ K + + ++ A + +
Sbjct: 135 NGNDVNTVALLQTISQNIVCLKEDNDYLRNAIVRKDEQLHENQQMMQKICAEKDELIQKI 194
Query: 172 DNDEYLTITQIGERLN---------PPQRARFLNKLLLKRGLQVSKV---SGGYRPTPKG 219
+ I ++ +N ++ L K + V KV S P
Sbjct: 195 VVHKDQQINRVMADMNRMYTGFQDTMQKKDEILQKKDEQVSSLVEKVIDLSDRAVEYPVS 254
Query: 220 EERGGKMCDVP 230
E++ +C
Sbjct: 255 EKKQPILCIAK 265
>gi|71276070|ref|ZP_00652351.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71902018|ref|ZP_00684063.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|170730465|ref|YP_001775898.1| hypothetical protein Xfasm12_1337 [Xylella fastidiosa M12]
gi|71163153|gb|EAO12874.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71728218|gb|EAO30404.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|167965258|gb|ACA12268.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 112
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 145 LKVNRGVTKITGVDQLEAMDIKH-LPS-SDNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
+ + I L +I+ LP+ D L TQ+G++L+ A+ +N+LL R
Sbjct: 5 IAAAATLACIKSNTNLTTEEIRRALPALQDPLCLLNATQLGKQLH--CSAKAVNQLLASR 62
Query: 203 GLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
G Q + T G +P S+ QL WN +++
Sbjct: 63 GFQFRNERDEWELTEAGRVWCEA---IPYSRNGHSSYQLLWNPDVIACL 108
>gi|325152623|gb|ADY88158.1| BRO-B [Helicoverpa armigera SNPV]
Length = 136
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 3 TITPFEFESNKIRTI--VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-- 58
+T +F ++++ I D + +W +A A L Y N+ +AI+ + + ++
Sbjct: 2 AVTTVQFANSELEVISIKDDNGELWMLANPFARILEYSNAPKAISTYVEINNQKILESIQ 61
Query: 59 -------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
T K + I+ ++ L+ S +P A++F W+ ++LP L G Y +
Sbjct: 62 SAQLGQITSSLHPKSKFINRAGLFELIQASRMPKAKEFRDWINSDLLPKLCDDGKYDMAT 121
Query: 112 PK 113
Sbjct: 122 DA 123
>gi|253583941|ref|ZP_04861139.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
gi|251834513|gb|EES63076.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
Length = 253
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 91/250 (36%), Gaps = 22/250 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE-AINAHCKGVAKRYPLKT 59
M+ + + +R D+ ++ +DVA LG+E + V K +
Sbjct: 7 MNELITIKN----VRGYADEKGTVYLNLEDVARGLGFEREKNGKMYVMWDRVNKYLEELS 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ I E Y+L +K+ A+KF+ V +E+LP++RK G Y V+ A
Sbjct: 63 FHTSVESNFIPENVFYKLCMKANNEVARKFQDLVCDEILPSIRKNGMYVVDNLLDNPDLA 122
Query: 120 STVLRVHKH-----------LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI--K 166
K L+E + + K + + ++ + + DI K
Sbjct: 123 IQAFTKLKEEREKRKELEIVLKENKPKVIFAEAVEASKTSILIGELAKLLKQNGHDIGQK 182
Query: 167 HLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSG--GYRPTPKGEERG 223
L S ++ I + G N P Q++ L +K ++ G TPK +G
Sbjct: 183 RLFSWLREQGFLIKREGSEYNMPTQKSMDLGLFEIKE-TAITHSDGHITVNKTPKVTGKG 241
Query: 224 GKMCDVPMQH 233
+
Sbjct: 242 QIYFMNKFKT 251
>gi|28057338|gb|AAO29195.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 124
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 9/120 (7%)
Query: 132 LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQR 191
L K A + + + T +T + A+ P L TQ+G+RL+
Sbjct: 10 LDKPAARAEPAVTAACIKSNTNLTTEEIRRALPALQEPLC----LLNATQLGKRLH--CS 63
Query: 192 ARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
A+ +N+LL RG Q + T G +P S+ QL WN +++
Sbjct: 64 AKTVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IPYSRNGHSSYQLLWNPDVIACL 120
>gi|165969110|ref|YP_001651010.1| baculovirus repeated ORF e [Orgyia leucostigma NPV]
gi|164663606|gb|ABY65826.1| baculovirus repeated ORF e [Orgyia leucostigma NPV]
Length = 348
Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 28/211 (13%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK---------------GVA 52
+ ++ ++ TI DKD W VA A ALGY N AI
Sbjct: 10 DNKTVEVYTI-DKDGVTWMVANPFAEALGYHNCANAIAKFVSRNNQKIYEEIKPPRIEED 68
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ I+ V+ L+ S +P+A++F+ W ++LPTL + G Y++
Sbjct: 69 DSSVQLIRNFKYNTKFINRAGVFELINSSEMPAAKRFKSWNNNDLLPTLCQEGEYNM-VK 127
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLK-VNRGVTKITGVDQLEAMDIKHLPSS 171
+ VH E + +KD L K +N+ I ++Q L S
Sbjct: 128 DAPNDIVEGMNAVHVATNEGEEAPWMKDLNDLKKIINQKDKMINNINQENKNLTIALTES 187
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
+N + +N Q NK LL+
Sbjct: 188 NN----------KIINMNQNLIIANKGLLQA 208
>gi|9631121|ref|NP_047791.1| Ld-bro-o [Lymantria dispar MNPV]
gi|3822389|gb|AAC70340.1| Ld-bro-o [Lymantria dispar MNPV]
Length = 336
Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F ++ T+ D++Q W VA A +L Y + AI+ V ++
Sbjct: 8 FVNGPLEVFTVQDENQEKWMVANPFAESLKYAIPHIAISKFVSTVNQKTYEELRSMRITS 67
Query: 56 --------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
L K + I+ V+ L+ S +P+A++F+ W ++LPTL G Y
Sbjct: 68 RITSTDDSSLLPRNVQAKTKFINRAGVFELISASEMPAAKRFKTWNTNDLLPTLCAEGEY 127
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKIT 155
S+ + A + VH E + +KD +L + +R + K+T
Sbjct: 128 SMSKDA-PSDIALGMNAVHVATNEGREAPWMKDLEEFKVVLAEKDRKIDKLT 178
>gi|298713106|emb|CBJ33466.1| EsV-1-117 [Ectocarpus siliculosus]
Length = 463
Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 1 MSTITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M + F F++ + I D F A + +G + +I + P+ T
Sbjct: 1 MDVLKTFVFDNTQYDVDIQIVDGKPIFRADKLGKIIGLKKIRSSIQHFDQDEKVVQPIDT 60
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV-----EAPKL 114
GG Q ++E VYRLL++S P A+ F++WV V+ T+R+TG Y + + +
Sbjct: 61 RGGHQDCTFLTEMGVYRLLMRSDKPIARPFQKWVAH-VIATIRETGKYELSKQLDDLKRQ 119
Query: 115 RATSASTVLRVHKHLEELAKQAGL 138
+ +L +K +E+ + L
Sbjct: 120 NDNEKADLLMHYKSQQEMETHSVL 143
>gi|20336383|gb|AAM18341.1| baculovirus repeat open reading frame b [Helicoverpa armigera NPV]
Length = 345
Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA------- 52
M+ + F +I ++ D +W +A A L Y N+AI H +
Sbjct: 1 MAVVKVHFNDRELEIISVKDDAGKLWMLANPFALVLNYGRPNDAIRNHVTDINVRNYEYF 60
Query: 53 --KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+R+ + + I+ ++ L+ S +P AQ+F W+ ++LP L G Y +
Sbjct: 61 KARRFNVDDVTLHPISKFINRAGLFELIQASRMPKAQEFRDWINSDLLPKLCDDGKYDM- 119
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKD-NQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
A A + VH E + ++D +L L ++ + D+ L
Sbjct: 120 ATDAPVGIAMGMNAVHAITNEGKEAPWMEDFRELKLMLSHKDELLAVKDKENEALTVALQ 179
Query: 170 SSDNDEYLTITQIGERLNPPQRAR 193
+++++ + + + + AR
Sbjct: 180 NANHNLAVANQGLLKAFDVVNDAR 203
>gi|284431238|gb|ADB84398.1| Bro [Apocheima cinerarium nucleopolyhedrovirus]
Length = 377
Score = 96.2 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEA---------------INAHCKGVAKRYPL 57
++ + D+ + W VA A AL Y N+A IN + G +
Sbjct: 40 EVFAVQDEKRENWMVANPFAEALKYSKPNKAVLEKVSAQNQKTLEEINPYRSGTTDESSI 99
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
K + I++ V+ L+ S +P+A++F+ W ++LPTL + G YS+
Sbjct: 100 LPRNIQAKTKFINQAGVFELINASNMPNAKRFKAWNNNDLLPTLCQEGEYSM-VKNASVD 158
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
A + VH + +KD L ++ + +I + Q E +++ + N++ +
Sbjct: 159 MAQGMNAVHAATNNGKEAPWIKDLTQLKQIIQKKDEIIEIKQKENVNLTTALQNSNEKLI 218
>gi|118197570|ref|YP_874282.1| Bro-b [Ecotropis obliqua NPV]
gi|113472565|gb|ABI35772.1| Bro-b [Ecotropis obliqua NPV]
Length = 337
Score = 95.8 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-----INAHCKGVAKRYP 56
+ +F I+ ++ + WF AK+ AT +GY A + K ++P
Sbjct: 12 NQPIEIKF----IKETINNNVQFWFAAKEFATEMGYGKPQAAFEKINLKYRKKYEDFKHP 67
Query: 57 ----LKTEGG--IQKVRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYS 108
+ ++EP +Y++++ S L + + F+ WVFEEVLPT+RKTG Y
Sbjct: 68 REMAIDDSSILIHPHTVFVNEPGLYQMILSSKLKNNRVEPFKEWVFEEVLPTIRKTGQYK 127
Query: 109 VEAPKLRAT--SASTVLRVHKHLEE---LAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
++ T A+TV + + L + N ++ K + + ++ A
Sbjct: 128 MDTAAAPTTGNDANTVALLQTISQNIVCLKEDNDYLRNAIVRKDEQLHVNQQMMQKICAE 187
Query: 164 DIKHLPSSDNDEYLTITQIGERLN---------PPQRARFLNKLLLKRGLQVSKVSGGYR 214
+ + + I ++ +N ++ ++ L+ K + +S
Sbjct: 188 KDELIQKIVVHKDQQIHRVMADMNRMYTGFQNTMQKKDEQMSSLVEK----IIDLSNRAV 243
Query: 215 PTPKGEERGGKMCDVP 230
P E++ +C
Sbjct: 244 EYPVSEKKQPILCIAK 259
>gi|215401346|ref|YP_002332650.1| BRO-E [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448846|gb|ACH88636.1| BRO-E [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 352
Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEA-----INAHCKGVAKRYPL------KTEGG 62
I TI D WF AK+ A +GY A + K R+P+ + G
Sbjct: 21 IETIDDDKVQFWFAAKEFAIEMGYGKPQAAFEKVNLKYRKKYGQFRWPVEAATHDSSFGM 80
Query: 63 IQKVRIISEPDVYRLLVKSTLPS--AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
++EP +Y++++ S L + + F++WVFEEVLPT+RKTG Y ++ + +
Sbjct: 81 QPSTVFVNEPGLYQMILSSKLKNNRVEPFKKWVFEEVLPTIRKTGQYKIDTAVVPTANND 140
Query: 121 T-----VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+ + +++ L + N ++ K + + ++ A + + +
Sbjct: 141 ANTVALLQTISQNIVCLKEDNDYLRNAIVRKDEQLHENQKMMQKICAEKDEMIQKIVVHK 200
Query: 176 YLTITQIGERLN---------PPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKM 226
I ++ +N ++ + L+ K V +S P E++ +
Sbjct: 201 DQQINRVMNDMNRMYTGFQETMQKKDEQVTSLVEK----VIDLSDRAVEYPVSEKKQPIL 256
Query: 227 CDVPMQHVE 235
C Q
Sbjct: 257 CIAKDQTGT 265
>gi|228861727|ref|YP_002854747.1| Bro-b [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425175|gb|ACO53587.1| Bro-b [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 348
Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 13/204 (6%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC---------KG 50
MS +T EF + + + W A A A+ Y N N AI H K
Sbjct: 1 MS-LTKIEFADKIVEVFKISQSGEDWMAANPFAEAMNYSNVNRAIRVHVAENNQKTLEKL 59
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ L T + + I+ V+ L+ S +P+A+KF++W ++ TL + G Y +
Sbjct: 60 QSDHCGLITSSLHPQTKFINRAGVFELINASEMPAAKKFKQWNTNDLWRTLCQEGEYRMT 119
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKD-NQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ VH ++ + +KD L + KI + + L
Sbjct: 120 TNA-PTKIVEGMNAVHVATKDGVEAPWMKDLAHLTTAIAEKDRKINELTVALTQSNEKLS 178
Query: 170 SSDNDEYLTITQIGERLNPPQRAR 193
++N+ + + N AR
Sbjct: 179 EANNNLVDANKGLLQAFNIINEAR 202
>gi|71897550|ref|ZP_00679795.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71732453|gb|EAO34506.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 266
Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ + + F + +I+D+D + A+++A ALGY + + ++
Sbjct: 1 MTQLPSAVCFSGQSL-SIIDRDGTPYLSARELARALGYADERSVLRIYARRADEFTEQMT 59
Query: 57 LK---TEGGIQ--KVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSV 109
T G Q +RI S + + + + A F RWV + EVLP++RKTG Y+V
Sbjct: 60 CVVKLTPQGEQARDIRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGEYTV 119
Query: 110 EAPKLRATSASTVLRVHKHLEEL--AKQAGLKDNQLLLK 146
P L + + K +EEL A + D + LL+
Sbjct: 120 N-PDLEYDQMRSYSKDRKQMEELNTAHSRWISDVRRLLE 157
>gi|21668326|emb|CAC84474.1| AV1-BRO-l10 protein [Spodoptera frugiperda ascovirus 1a]
Length = 268
Score = 95.4 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 22/178 (12%)
Query: 3 TITPFEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----- 55
++ F S ++ T+VD W A A ALGY + AI + ++Y
Sbjct: 2 ALSKVNFAGRSLEVFTVVDSTGEKWHQANPFADALGYSIHHLAITKYVSKQNQKYYSEIG 61
Query: 56 ----------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+ K I+ V+ L+ S +P+A++F W ++LPTL G
Sbjct: 62 SMRTTSTDESSVSPPSIQAKTNFINTAGVFELINASEMPAAKRFRTWENNDLLPTLCHEG 121
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD----NQLLLKVNRGVTKITGVDQ 159
Y++ A A A + VH + A ++D +++ +R + +T +
Sbjct: 122 EYNM-AKDAPADVAVGMNAVHAATNDGADAPWMRDLVELKASIVEKDRIIECVTRENS 178
>gi|116326080|ref|YP_803405.1| baculovirus repeated ORF-c [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180818|gb|ABI13795.1| baculovirus repeated ORF-c [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 343
Score = 95.4 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY----------- 55
F ++ T+ D + W VA A AL Y N+AI ++
Sbjct: 8 FVNGPLEVFTVADDKRENWMVANPFAEALNYSKPNKAILEKVSSCNQKTYEELRSYRIGT 67
Query: 56 ----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ K + I+ V+ L+ S +P+A+KF++W ++LPTL K G Y++ A
Sbjct: 68 TQITSTLPKEVQAKTKFINTAGVFELINASEMPAAKKFKQWNANDLLPTLCKEGEYNM-A 126
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKD 140
A A + VH + + + D
Sbjct: 127 VDAPAEIAEGMNAVHAAVTNGQQAPWMAD 155
>gi|309807065|ref|ZP_07701045.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 03V1-b]
gi|308166561|gb|EFO68760.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 03V1-b]
Length = 150
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP + G Y +
Sbjct: 1 MDTLTQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAIVHKGVYMTDKKAY 60
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
T + + L++ A Q KD Q+ + + ++ + L
Sbjct: 61 DITHDRSGATLADLLQQAADQLKQKDIQIAEMKPKALFADAVATSNRSILVGELAKLIRQ 120
Query: 175 EYLT-----ITQIGERLNPPQR-ARFLNKL 198
++ ++++ LN QR + LNK
Sbjct: 121 IWMKSRLKILSKLLVMLNDIQRLLQKLNKR 150
>gi|134287197|ref|YP_001110893.1| Bro3 [Heliothis virescens ascovirus 3e]
gi|133722105|gb|ABO37227.1| Bro3 [Heliothis virescens ascovirus 3e]
Length = 346
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 62/156 (39%), Gaps = 18/156 (11%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC--KGVAKRYPL 57
MS IT +F ++ T VD + W VA A ALGY + AI K +
Sbjct: 1 MS-ITKIKFGDKEVDTYNVDFNGEKWMVANPFAEALGYSIPHIAIAKFVTMKNQKSYEEI 59
Query: 58 KT-------------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
K+ K + I+ V+ L+ S +P A++F+ W ++LP L +
Sbjct: 60 KSIRTASTDSVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPGLCQE 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD 140
G Y + A + VH + A +KD
Sbjct: 120 GEYKMVRDA-PVDIAHGMNAVHVATNDGADAPWMKD 154
>gi|134287304|ref|YP_001111000.1| Bro17 [Heliothis virescens ascovirus 3e]
gi|133722212|gb|ABO37334.1| Bro17 [Heliothis virescens ascovirus 3e]
Length = 502
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 30/213 (14%)
Query: 14 IRTIVDKDQNIW-FV-AKDVATALGYENSNEAINAHC-----------KGVAKRYPLKTE 60
I I +D+ V +A LGY+ ++A+ H K K+ L
Sbjct: 20 IVEISREDKEPLAMVSGHGIAELLGYKQPDKAVRDHISMKHKQNWSQIKARLKQPGLDLP 79
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV---------E 110
Q I+EP +Y+L KSTLP A++F+ W++EEVLPT+R+TG Y++ E
Sbjct: 80 ANWQPNTVFITEPAIYKLCTKSTLPEAEEFQDWIYEEVLPTIRRTGGYNIHDRNGTSVAE 139
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLL-------LKVNRGVTKITGVDQLEAM 163
K A + + + + L Q D ++ V++ +I G+
Sbjct: 140 YDKKLADGQNELTKTQLSVANLETQVAKYDARIAELQLENEKVVSKYDARIAGLQLENEK 199
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLN 196
I L S E + + +L+ R N
Sbjct: 200 TISALKSEHQKEIAALKEHEFKLHLALRDMMGN 232
>gi|302559595|ref|ZP_07311937.1| DNA-binding protein [Streptomyces griseoflavus Tu4000]
gi|302477213|gb|EFL40306.1| DNA-binding protein [Streptomyces griseoflavus Tu4000]
Length = 339
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 12/185 (6%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-------- 62
++R + D WF A DV LG+ NS +A+ H + GG
Sbjct: 28 GARVRRLTMPDGTHWFPAVDVCKELGHTNSRKALADHVPEEQREILETVTGGYGLSVPAG 87
Query: 63 ---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ +++IS + L+ T P+ F++WV EV+ T+++ GSY+++ +++
Sbjct: 88 REWRRDLQVISLQGLVLLVNACTKPACAPFKQWVA-EVIETVQREGSYTLDEAEVQPPGP 146
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + L+ + L L + T + +
Sbjct: 147 GAPVAYAMPEQVAEAIVRLEAHNLRLDEELADGQRTSIALQKETLATQREMLVTQRETLA 206
Query: 180 TQIGE 184
TQ
Sbjct: 207 TQQAT 211
>gi|71276418|ref|ZP_00652694.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71901023|ref|ZP_00683134.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71162734|gb|EAO12460.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71729209|gb|EAO31329.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 280
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYPL---------KTEGG 62
TI+D D + A D+A ALGY + A+ N H + L +
Sbjct: 86 TIIDHDGIPYLTAADLARALGYADER-AVSRIYNRHSEEFTVEMSLVVNLTTKGFGSGNS 144
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSAS 120
+ R+ S + + + + A F RWV + EVLP++RKTGSYS + +
Sbjct: 145 EKPTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALC 204
Query: 121 TVLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + H ++L + + + K Q L G T+I+G
Sbjct: 205 AIWFLCDHFKKLHEMSRVNKVPQALY--WLGATEISG 239
>gi|258623706|ref|ZP_05718684.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258584010|gb|EEW08781.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 254
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-----------GVAK---RYPLK 58
IRT +D++ I F DV L +N N + K V K + +
Sbjct: 18 PIRT-LDRNGKILFCFPDVVKVLAKDNQNYSNKVGEKIGFAGLLSKLSSVLKPKHQVIIP 76
Query: 59 TEG----GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G G + ++E +Y+LL P A++F+ WVFEEVLP++RK Y PK
Sbjct: 77 LSGTNEFGAEFDYFVTEAGLYKLLTFDDSPGAERFQDWVFEEVLPSIRKYKMY--PPPKE 134
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
A+ ST++ + K L + K L KV ++T ++
Sbjct: 135 GASEMSTMVALLKQNVALLAEEIEKRELLESKVQTIDERVTAIET 179
>gi|110799301|ref|YP_695379.1| BRO domain-containing protein [Clostridium perfringens ATCC 13124]
gi|110673948|gb|ABG82935.1| BRO domain protein [Clostridium perfringens ATCC 13124]
Length = 243
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALG-YENSNE----AINAHCKGVAK 53
M+ + F+ E +RTI ++D +I A+D A LG +N N+ I+ + +
Sbjct: 1 MNNLMIFKNEDLSIDVRTIKNEDGSISINAEDTARGLGFIQNQNKNGKLYISIRWETINN 60
Query: 54 RYP-LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ K I E Y L +K+ A+KF+ W+ +V+P +RK G Y ++
Sbjct: 61 YCKEFNFPNKLGKDDFIPESLFYLLAMKANNEVARKFQTWLAVDVIPQIRKNGQYQMKPT 120
Query: 113 ----------KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
K V+ V K ++L + L KVNR V + G + A
Sbjct: 121 SNLELLELQVKALREVEERVIEVDKKFDDL-PLFEIDSKDLKKKVNRVVVSLLGGKKSNA 179
Query: 163 MD 164
Sbjct: 180 YK 181
>gi|282920047|ref|ZP_06327775.1| phage antirepressor protein [Staphylococcus aureus subsp. aureus
C427]
gi|282316218|gb|EFB46598.1| phage antirepressor protein [Staphylococcus aureus subsp. aureus
C427]
Length = 213
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI----- 63
F + +IR I +K+ W +A DVA LG+ +++ A+ + V ++T
Sbjct: 6 FNNKEIRFI-EKNGEYWAIATDVAKVLGFRDAHTAVRVLPEHVRDTLKVRTTSDKKKSRK 64
Query: 64 -QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR---KTGSYSVEAPKLRATSA 119
Q +I+E +YRL+++S A F+ W+ +VL LR K Y V +
Sbjct: 65 FQDYTVINEKGIYRLIMRSNKTEALDFQDWIC-DVLVELRTSTKLKEYEVFHMLDKEKQN 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ + +E ++K+ K + N+ V+ + G ++ +
Sbjct: 124 EAMNNLKNGIEAISKKDYCKAQTI---SNKAVSNVFGFPKMIQKED 166
>gi|50121236|ref|YP_050403.1| putative phage-related protein [Pectobacterium atrosepticum
SCRI1043]
gi|49611762|emb|CAG75211.1| putative phage-related protein [Pectobacterium atrosepticum
SCRI1043]
Length = 232
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 3 TITPFEFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCK-----GVAKRYP 56
+ F K+ I D + F A VA A G + + ++N GVA R
Sbjct: 12 NVNVMTFAGLKLDVITGHPDHELLFKATQVAGAAGIKYPSASVNKIVDFKGFNGVALRVS 71
Query: 57 LKTEGGIQ--------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
E + K+ + +E VY +L++ + + F +WV EEVLPT+RKTGSY+
Sbjct: 72 DLGETSHKMLGHRVSPKMWLFNEAAVYSMLLRGHTTAGEPFRKWVTEEVLPTIRKTGSYN 131
Query: 109 VEAPKLRA--TSASTVLRVHKHLEELA-KQAGLKDNQLLLKV---NRGVTKITGVDQLEA 162
VE + A+ + L +L + AGLK+ L K+ + + K Q ++
Sbjct: 132 VETSETPEGIQFAAEFSAMRLMLNDLRDEVAGLKETILKWKIPAPMQVIAKSPYEGQAKS 191
Query: 163 MDIKHLPSSDNDEY---LTITQIGERLNPPQR 191
+ + +E L ++++ L
Sbjct: 192 NVFHAMSAKQYNECAEGLNVSRLVSELGVTPS 223
>gi|270659695|ref|ZP_06222358.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270316963|gb|EFA28644.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 77
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 1 MST---ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
MS F F+S+++R I D +Q WF DV LGY+N+ +A+ HCK G+AKRY
Sbjct: 1 MSNQVQFNAFNFKSSQVRVITDPNQEFWFCGSDVCYILGYKNAPDALAKHCKQGGIAKRY 60
Query: 56 PLKTEGGIQKVRIISEPD 73
T+ G Q++ I+EP+
Sbjct: 61 T-PTQSGEQEMIFINEPN 77
>gi|304437552|ref|ZP_07397508.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369474|gb|EFM23143.1| phage antirepressor protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 256
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/222 (23%), Positives = 85/222 (38%), Gaps = 38/222 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE--------AINAHCKGVA 52
MS + + V KD + W A+DVA G+ + +N + KG
Sbjct: 17 MSEVITI----GNVSGYVAKDGSAWLNAEDVARGWGFTQTKNGTEYVRWETVNGYLKGFG 72
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ + + E VYRL K+ AQ F+ + +EVLP +RKTG Y+V+
Sbjct: 73 FSQLVGKD------DFLPENMVYRLGFKANNDVAQAFQAKLADEVLPAIRKTGGYNVKHD 126
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR--------GVTKITGVDQLEAMD 164
+ K +E + + A + LLLK+ V + +
Sbjct: 127 DALQS---------KRVEIMERNARTRAANLLLKIAERTNIPEYKAVCNAKAAEMVTGEL 177
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQV 206
I LP ++ Y + T+IG A + KL L+V
Sbjct: 178 ILPLPVAERRTY-SATEIGAMFGV--SANKIGKLANMHKLKV 216
>gi|9106702|gb|AAF84454.1|AE003991_6 phage-related protein [Xylella fastidiosa 9a5c]
Length = 315
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLKTE---------GGI 63
TI+D D + A D+A ALGY++++ + H L
Sbjct: 122 TIIDHDGIPYLTAADLARALGYKDASAVLRIYSRHTDEFTSEMSLTVNLTVKGFGCGNSE 181
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSAST 121
+ VR+ S + + + + A F RWV + EVLP++RKTGSYS +
Sbjct: 182 KPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSATGTLVNENVLYA 241
Query: 122 VLRVHKHLEELAKQAGL-KDNQLLLKV 147
+ + H ++L + + + K Q L +
Sbjct: 242 IWFLCFHFKKLHEMSHVNKVPQALAWL 268
>gi|77747557|ref|NP_298934.2| hypothetical protein XF1645 [Xylella fastidiosa 9a5c]
Length = 210
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 15/147 (10%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLKTE---------GGI 63
TI+D D + A D+A ALGY++++ + H L
Sbjct: 17 TIIDHDGIPYLTAADLARALGYKDASAVLRIYSRHTDEFTSEMSLTVNLTVKGFGCGNSE 76
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSAST 121
+ VR+ S + + + + A F RWV + EVLP++RKTGSYS +
Sbjct: 77 KPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSATGTLVNENVLYA 136
Query: 122 VLRVHKHLEELAKQAGL-KDNQLLLKV 147
+ + H ++L + + + K Q L +
Sbjct: 137 IWFLCFHFKKLHEMSHVNKVPQALAWL 163
>gi|134287248|ref|YP_001110944.1| Bro9 [Heliothis virescens ascovirus 3e]
gi|133722156|gb|ABO37278.1| Bro9 [Heliothis virescens ascovirus 3e]
Length = 521
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 18/182 (9%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
MS I+ F ++ ++ D +W +A A L Y ++ AI +R
Sbjct: 1 MSVISVQFANVDFEVVSVRDDGGQLWLLANPFARILEYVSAPNAIAKFVSDKNQRSFENI 60
Query: 60 EGGIQ------------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K + I+ ++ L+ S +P A +F+ W+ +LP L GSY
Sbjct: 61 RSHRCDETYLTSSYVQAKSKFINRAGLFELIQASRMPKALEFKNWINSVLLPKLCDDGSY 120
Query: 108 SV--EAPKLRATSASTVLRVH---KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+ +AP A++ + V V + + + LK+ K+ Q+
Sbjct: 121 DMARDAPMEIASAMNAVHAVTHDGRDAPWMDRTPNTSSEVAELKIELLTAKLQTQSQVAE 180
Query: 163 MD 164
D
Sbjct: 181 RD 182
>gi|209170995|ref|YP_002268142.1| BRO-D [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436586|gb|ACI28813.1| BRO-D [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 353
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 87/231 (37%), Gaps = 25/231 (10%)
Query: 23 NIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKTEGG----------IQKVRIISE 71
WF AK+ A A+GYE A K K +SE
Sbjct: 33 QFWFAAKEFAKAMGYEKPQAAFEKIDIKYRRKYEEFDQPREMAIDDSSLLIHPHTVFVSE 92
Query: 72 PDVYRLLVKSTLPSA--QKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
P +Y++++ S L + ++F+ WVFE VLPT+RKTG Y++E + + +T +
Sbjct: 93 PGLYQMVLSSKLKNVRVEQFKSWVFEVVLPTIRKTGRYNIEQAVVPTSDVNTTTLLQTIS 152
Query: 130 EELAKQAGLKD---NQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ + D + K + + ++ A + + + I ++ +
Sbjct: 153 QNIVGLKQDNDYLRRAIAAKDQQLNENQQLMQKIAAQKDELIQKIVVHKDQQINRVMNDM 212
Query: 187 NPPQRARFLNKLLLKRGLQVS-------KVSGGYRPTPKGEERGGKMCDVP 230
N + + + K+ QVS +S P E++ +C
Sbjct: 213 N--RMYTGFQQTMQKKDEQVSSLVEKVIDLSDRAVEYPVSEKKQPVLCIAK 261
>gi|33331735|gb|AAQ11043.1| BRO-B [Mamestra configurata NPV-A]
Length = 331
Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 74/192 (38%), Gaps = 13/192 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAINAHCKGVAKR---- 54
M+ + +F + + + +D +W +A A L Y N+AI +H K+
Sbjct: 1 MAVVKV-QFGTQDLEVVSLRDEKGQLWMLANPFAKILEYSVLNKAIWSHVSEPNKKNLEK 59
Query: 55 -----YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + T + + I+ ++ L+ S +P AQ+F W+ ++L L TG Y +
Sbjct: 60 LQPFQHGMVTSSLHPQSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHM 119
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ A A + VH + + +KD L ++ +I + E +
Sbjct: 120 QTDA-PADIAEGMNAVHAATNDGKEALWIKDLSELKQIVALKDQIIAIKDEENKKLTVNL 178
Query: 170 SSDNDEYLTITQ 181
N Q
Sbjct: 179 QEANQNLTVANQ 190
>gi|255305203|ref|ZP_05349375.1| prophage antirepressor [Clostridium difficile ATCC 43255]
Length = 262
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 35/262 (13%)
Query: 1 MSTITPFEFE----SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ + + E + R + F+AKDVA + + N + ++ +
Sbjct: 1 MNNLQTIK-EQELLGKEFRVYGTL-EKPLFLAKDVAEWIEHSNVSTMLSNIEAEEKELIQ 58
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--------- 107
+ T ++E +Y +L++S A++F++ V +++L +RKTG Y
Sbjct: 59 IGTLNNAYSAWFLTEDGLYEVLMQSRKQIAKQFKKEV-KKILKEIRKTGGYIHTTEDMSD 117
Query: 108 -------------SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
++E V+++ + A DN +L+ + +
Sbjct: 118 DEIMARALQVAQKTIEKKNREIEEKDKVIQLQQPKVLFADSVASSDNSILVGELAKLLRQ 177
Query: 155 TGVDQLEAMDIKHLPSSDNDEYLTITQIGERLN-PPQRARFLNKLLLKRGLQVSKVSGG- 212
G+D + L N+ YL I + GE N P Q++ L + +K G +V
Sbjct: 178 NGIDTGQNRLFDWL---RNNGYL-IKRKGEDYNTPTQKSVDLGVIEIKEGTRVHPDGHTS 233
Query: 213 YRPTPKGEERGGKMCDVPMQHV 234
TPK +G +
Sbjct: 234 ITKTPKITGKGQIYFINKFKKN 255
>gi|257793094|ref|YP_003186492.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|258510572|ref|YP_003184006.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477298|gb|ACV57617.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479786|gb|ACV60103.1| prophage antirepressor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 153
Score = 93.1 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 1/142 (0%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
++R + D F A V A+G N +A+ L+ G +++ ++
Sbjct: 10 NGTQVR-VFWVDGEPLFDAMGVCEAVGLRNVEKALRRLDDDEQGSVILEGLDGREEIHVV 68
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
E + RL + A+ +RW EVLP++ +TG Y + + L
Sbjct: 69 RESGMLRLSLVGKDEHARALQRWATREVLPSVIRTGRYGEPDIEQEQLQLQKATLLFNTL 128
Query: 130 EELAKQAGLKDNQLLLKVNRGV 151
+ + Q L V
Sbjct: 129 AMFRDRLFDETVQNLANAMADV 150
>gi|169344304|ref|ZP_02865284.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
gi|169297562|gb|EDS79664.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
Length = 191
Score = 92.7 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 27/157 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + +F +I T++ D I ++AKDVA L Y++ ++AIN K Y ++ E
Sbjct: 1 MNDLFIKKFNDEEIITLI-LDNRICWIAKDVAKILNYDDPSKAINQCIKTEKFEYGIEYE 59
Query: 61 ----------------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
K+ I E +Y + S LP F +W+ EVL
Sbjct: 60 VLAGDKLKEVKRLIGVTHISYLKQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVL 119
Query: 99 PTLRKTGSYSVE----APKLRATSASTVLRVHKHLEE 131
P LR G+YS+ L+ S + L + L E
Sbjct: 120 PELRTKGTYSINKESYKDNLKDESENLSLYIQDKLNE 156
>gi|329935729|ref|ZP_08285534.1| DNA-binding protein [Streptomyces griseoaurantiacus M045]
gi|329304820|gb|EGG48693.1| DNA-binding protein [Streptomyces griseoaurantiacus M045]
Length = 318
Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-------- 62
+IR + D + WF A DV LG+ NS +A+ H A R L+T G
Sbjct: 28 GARIRRLTMPDGSHWFPAVDVCKRLGHSNSRQALADHVPD-AHRDSLETVTGAYGLDIPA 86
Query: 63 ----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ + +I + RL+ T P+ + F++W EV+ T+++ GSYS+E ++ +
Sbjct: 87 GREWRRDLNLIDLQGLVRLVNACTKPACEPFKQW-AAEVIETVQREGSYSLEEAAVQPAA 145
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD 158
L + L+ + L + V + ++
Sbjct: 146 PGAPLAYAMPEQVAEAIVRLEAHNLEVDEELAVARRASLE 185
>gi|167770517|ref|ZP_02442570.1| hypothetical protein ANACOL_01862 [Anaerotruncus colihominis DSM
17241]
gi|167667112|gb|EDS11242.1| hypothetical protein ANACOL_01862 [Anaerotruncus colihominis DSM
17241]
Length = 263
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 74/206 (35%), Gaps = 20/206 (9%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKRYPLKTEGGIQKVRIISEPDV 74
+KD + + VA LG+ + ++ + G L ++ I E
Sbjct: 29 EKDGTAYLKLEAVARGLGFTETKDSKDYVMWRRVDGYL--ANLGFGTSAERPDFIPENVF 86
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT-SASTVLRVHKHLEELA 133
YRL +K+ +A+ F+ + +EV+P +RK G+Y A + ++R+
Sbjct: 87 YRLAMKAKNEAAEAFQAKIADEVIPAIRKHGAYMTPETLEAAIMNPDIMIRLCT------ 140
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSDNDEYLTITQIGERLNPPQR 191
LK+ Q K V VD + D + + ++L ++
Sbjct: 141 ---ALKNEQEKRKALETVNSALTVDNQIMRPKADYFDELVDRNLLTNFRETAKQLEIKEK 197
Query: 192 ARFLNKLLLKRGLQVSKVSGGYRPTP 217
F+ LL K+ G P
Sbjct: 198 -NFIGFLLEKK-YIYRDKRGKLLPYA 221
>gi|329729085|gb|EGG65496.1| BRO family, N-terminal domain protein [Staphylococcus epidermidis
VCU144]
Length = 213
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAK---RYPLKTEGG 62
F +IR I +KD W VA DVA LG ++N A+ H +G K R K
Sbjct: 6 FNDKEIRFI-EKDDEYWAVAGDVAKVLGLRDANTAVRYLPTHTRGTLKGRTRSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TG--SYSVEAPKLRATSA 119
Q +I+E +YRL+++S A++F+ W+ +VL LR+ TG Y +
Sbjct: 65 FQDYTVINEKGIYRLVMRSNKTEAEEFQDWIC-DVLVKLRQSTGLKGYEAFRMLDKEKQK 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ + +E ++K+ K + N+ V+ + G ++
Sbjct: 124 EAMDNLKSGIEVISKKDYCKAQAI---SNKAVSNVFGFPKMIKKQD 166
>gi|182681959|ref|YP_001830119.1| hypothetical protein XfasM23_1432 [Xylella fastidiosa M23]
gi|182632069|gb|ACB92845.1| conserved hypothetical protein [Xylella fastidiosa M23]
gi|307578220|gb|ADN62189.1| prophage antirepressor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 84
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVP 230
+ L TQ+G+RL+ A+ +N+LL RG Q + T G +P
Sbjct: 5 QEPLCLLNATQLGKRLH--CSAKTVNQLLASRGFQFRNERDEWELTEAGRVWCEA---IP 59
Query: 231 MQHVEGSTQQLKWNSNLLVSF 251
S+ QL WN +++
Sbjct: 60 YSRNGHSSYQLLWNPDVIACL 80
>gi|71275343|ref|ZP_00651629.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71163643|gb|EAO13359.1| phage-related protein [Xylella fastidiosa Dixon]
Length = 196
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYPL---------KTEGGI 63
I+D D + A D+A ALGY + A+ N H + L +
Sbjct: 3 IIDHDGIPYLTAADLARALGYADER-AVSRIYNRHSEEFTVEMSLVVNLTTKGFGSGNSE 61
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSAST 121
+ R+ S + + + + A F RWV + EVLP++RKTGSYS + +
Sbjct: 62 KPTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALCA 121
Query: 122 VLRVHKHLEELAKQAGL-KDNQLLLKVNRGVTKITG 156
+ + H ++L + + + K Q L G T+I+G
Sbjct: 122 IWFLCDHFKKLHEMSRVNKVPQALY--WLGATEISG 155
>gi|251780911|ref|ZP_04823831.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243085226|gb|EES51116.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 237
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALG-YENSNEAINAHCKGVAKRYP- 56
MS I F E+ K +RTI + D +I A+D A G YE I + +
Sbjct: 1 MSNIQIFNNENLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ K I E Y L +K+ AQ F++W+ EV+P++RKTGSY +
Sbjct: 61 FGFSQDVAKDDYIPESLFYMLGMKANNKVAQDFQKWLATEVIPSVRKTGSYQLPKISKEL 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVN 148
+ + + LE K LKDN L ++
Sbjct: 121 QAIFMIDGKQQRLENEVK--DLKDNMPLFNID 150
>gi|285002387|ref|YP_003422451.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343647|gb|ACH69462.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 358
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-------- 55
I + + ++ +I+D + +W +A A L Y N+ +AI+ + ++Y
Sbjct: 21 IVQYGNQKLEVISIMDYEGQVWMLANPFARILEYSNAPKAISHYVNSNNQKYFEDIKSAQ 80
Query: 56 -----PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV- 109
+ + K + I+ ++ L+ S +P AQ+F W+ ++LP L G Y +
Sbjct: 81 IGQTSKMTSHTIQAKSKFINRAGLFELIQSSRMPKAQEFRNWINSDLLPKLCDDGKYDMV 140
Query: 110 -EAPKLRATSASTVLRVH---------KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+AP + + K L EL + KD + +K + K+T
Sbjct: 141 TDAPIEIIDGMNAIHAATSNGVEAPWMKDLSELKRVIVKKDELIAVK-DEENKKLT---- 195
Query: 160 LEAMDIKHLPSSDNDEYLTI 179
+ D H N L
Sbjct: 196 VALQDANHNLIEANKGLLQA 215
>gi|327198731|emb|CCA61432.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 431
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 36/172 (20%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-----------------LKTEGGIQK 65
+ +F KD+ L Y + +A+ + K+ L + G
Sbjct: 33 DPYFCGKDICNILQYNDIKQALQNNVYDEDKKPLSALGVCGTPNPNSSAIRLGSYSGAYH 92
Query: 66 ---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
++E +Y L++ S P A++F+R+V +LP++RK G +SV L
Sbjct: 93 EGRAVYVNEAGLYSLVLTSKAPFAREFKRYVCSVILPSIRKFGQFSVNQLAL-------- 144
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
E ++ +KDN+ +R + V + E I+ + S +
Sbjct: 145 --------EYEQKLAIKDNERREMADRIEAERLAVQEREREMIERIESEKRE 188
>gi|116326823|ref|YP_803360.1| hypothetical protein TNAV2c_gp137 [Trichoplusia ni ascovirus 2c]
gi|102231831|gb|ABF70654.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 317
Score = 91.6 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 19/140 (13%)
Query: 1 MSTITPFEFESNKIR-TIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGV 51
MS +T +F ++ V + W VA A AL Y + AI+ +
Sbjct: 1 MS-LTKVQFGDKEVEAYTVTFNGEKWMVANPFAEALNYSVPHIAISKFVTVKNQKSFDEI 59
Query: 52 AKRYPLKTE-------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ T+ K + I+ V+ L+ S +P A++F+ W ++LP L +
Sbjct: 60 KSKRSASTDCVTSLPRNIQAKTKFINRAGVFELINASDMPGAKRFQAWNNNDLLPALCQE 119
Query: 105 GSYSV--EAPKLRATSASTV 122
G Y++ +APK A + V
Sbjct: 120 GEYNMRRDAPKAIADGMNVV 139
>gi|32035075|ref|ZP_00135134.1| COG3617: Prophage antirepressor [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 215
Score = 91.6 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA-- 116
T+GG Q+V I+EP++YR++ +S A F+ WVFEEVLP +RKTG YS + ++
Sbjct: 5 TKGGKQEVTFINEPNLYRIIFRSNKSQAIDFQNWVFEEVLPQIRKTGQYSQNSTQIVPLT 64
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH---LPSSDN 173
+ + + +++ + GL ++ ++ + DQL +H ++
Sbjct: 65 ITPEQQRAIQEAVQQAHYRTGLHWQEIYSRLKSTF-NVAKYDQLPQTMFEHVINFLNTLG 123
Query: 174 DEYLTITQIGERLNP-PQRARFLNKLLLKRG 203
++Y I + + + A + K L++
Sbjct: 124 NQYRPIDRSKKDITIAGLDAEQIAKYLVRAR 154
>gi|21222224|ref|NP_628003.1| DNA-binding protein [Streptomyces coelicolor A3(2)]
gi|5457249|emb|CAB46937.1| putative DNA-binding protein [Streptomyces coelicolor A3(2)]
Length = 325
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 12/204 (5%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTEGG 62
++R + + WF A DV LGY + +A+ H + V + L G
Sbjct: 28 GARVRRLTMPGGSHWFPAADVCKELGYTTTRKALLDHVPEEHRDSLETVTGSHSLSIPAG 87
Query: 63 IQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ +++I + L+ T P+ F++WV EV+ T+++ GSYS++ +++ T
Sbjct: 88 RKWRRDLQLIDLQGLILLVNACTKPACAPFKQWVA-EVVETVQREGSYSLDEAEVQPTEP 146
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + L+ + L L + T + M + +
Sbjct: 147 GAPVAYAMPDQVADAIVRLEAHNLKLDEELAEGQRTSIALQREMLATQQATLAVQQSTLA 206
Query: 180 TQIGERLNPPQRARFLNKLLLKRG 203
Q + A + L+L +G
Sbjct: 207 VQQAMVHALERIAGRFDTLVLHQG 230
>gi|257451497|ref|ZP_05616796.1| putative antirepressor [Fusobacterium sp. 3_1_5R]
gi|317058077|ref|ZP_07922562.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683753|gb|EFS20588.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 253
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 18/223 (8%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
+N F+AKDVA + + NE I + + G +++ ++E +Y +L+ S
Sbjct: 24 ENPLFLAKDVAEWIEHNKPNELIANVDDTEKLKAIISHSGQNREMWFLTEDGLYEVLMLS 83
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSY-----------SVEAPKLRATSASTVLRVHKHLE 130
P A++F++ V +++L T+RK G Y +++A + LE
Sbjct: 84 RKPIAKEFKKEV-KKILKTIRKNGMYVVDDLLDNPDLAIQAFTKLKEEREKRKELEIKLE 142
Query: 131 ELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI--KHLPSSDNDEYLTITQIGERLN- 187
E + D+ K + V ++ + + +DI L + I + G N
Sbjct: 143 EDKPKVLFADSVSASKTSVLVGELAKLLKQNGIDIGQNRLFEQLRNLGYLIQKKGSSFNM 202
Query: 188 PPQRARFLNKLLLKRGLQVSKVSGGYR--PTPKGEERGGKMCD 228
P QR+ L +K +S+ +G R TPK +G +
Sbjct: 203 PTQRSMELKLFEIKE-TTISQPNGEIRIQKTPKVTGKGQQYFI 244
>gi|86355577|ref|YP_473245.1| BRO-c [Hyphantria cunea nucleopolyhedrovirus]
gi|86198182|dbj|BAE72346.1| BRO-c [Hyphantria cunea nucleopolyhedrovirus]
Length = 241
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--- 53
M + F+F ++ +R ++++DQ + FVAKDVA +L Y+++ A+ +H K
Sbjct: 1 MCQVKIGEFKFGEDTFALRYVLERDQQVKFVAKDVAASLKYQDTKHAVKSHVDDKYKCTF 60
Query: 54 ---RYPLKTEGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ E ++ + +I + V +L ++S L +A + + W +E VLP
Sbjct: 61 ERGCINISKENSVKQGDPLYLSPQTILIDKIGVIQLFMRSKLHNAAELQNWFYERVLPQ 119
>gi|315650036|ref|ZP_07903116.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
gi|315487806|gb|EFU78109.1| phage antirepressor protein [Eubacterium saburreum DSM 3986]
Length = 183
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 28 AKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQ 87
A D+A ALG+ ++N A+ + + T GIQ V I++E +YRL+++S P A+
Sbjct: 2 ATDIANALGHRDANNALKKMKTKYKGTHKVSTPSGIQNVTILNEKGIYRLIMRSNKPEAE 61
Query: 88 KFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKV 147
+F+ +V+ EV+ LR+ Y + K E L K A + +
Sbjct: 62 EFQDFVY-EVIKGLREASGYEGFEIFRMLDKEHQKEMMKKLQEGLKKPARVDYIKANTIA 120
Query: 148 NRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
N+ V+ G ++ L + E + + +
Sbjct: 121 NKAVSLKHGYPKMVKKADMALEMLKDREPILVDTV 155
>gi|168187173|ref|ZP_02621808.1| BRO family, N- domain protein [Clostridium botulinum C str. Eklund]
gi|169294927|gb|EDS77060.1| BRO family, N- domain protein [Clostridium botulinum C str. Eklund]
Length = 247
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 19/182 (10%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA----INAHCKGVAKRYPLKTE-GG 62
+FE NK+ I +KD + F ALGY + + + V + T G
Sbjct: 10 QFEGNKVEMI-EKDGQVLFELYSTGMALGYVKAAKGKLYPQKDRIEKVLTNAEISTVVQG 68
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA----------P 112
+Q+ ++E +Y ++++ + F +WV EVLPT+RKTG Y E P
Sbjct: 69 VQQ--YLTENMLYDFMLEARTEKCKSFRKWVTNEVLPTIRKTGGYVNEGKEEEFIDNYFP 126
Query: 113 KLRATSASTVLR-VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
L + +++ + K ++EL +A D + K N+ + ++ Q+ +
Sbjct: 127 TLSEDTKKAMVKDLQKSVKELKPKADGYDRMINAKNNQTMNQVAKSLQVGRNKLFSFLRQ 186
Query: 172 DN 173
N
Sbjct: 187 QN 188
>gi|290958941|ref|YP_003490123.1| hypothetical protein SCAB_45151 [Streptomyces scabiei 87.22]
gi|260648467|emb|CBG71578.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 323
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 90/200 (45%), Gaps = 22/200 (11%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTE-- 60
++R + D WF A DV LG+ + ++A++ H + V++ Y L
Sbjct: 32 GARVRRLTMPDGAHWFPAVDVCKELGHTSPSKAVSDHVPLEHRAALETVSRTYGLSIPAG 91
Query: 61 -GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
G + + +I + L+ T P+A F++W EV+ T+++ GSY++E +++ +
Sbjct: 92 RGWRRDLILIDMQGLLFLVTACTKPTAAPFKQW-AVEVIETVQREGSYTLEEAEVQPSEP 150
Query: 120 STVL------RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ +V + + L ++ D QL + +R + + +L+ + ++
Sbjct: 151 GAPIAYAMPEQVAEAIVRLEERNLQADEQLTVAQHRSIALQEQMVELQTAAL----AAQQ 206
Query: 174 DEYLTITQIGERLNPPQRAR 193
+ +I +RL+ AR
Sbjct: 207 VMAQAMERIADRLDALTLAR 226
>gi|294630404|ref|ZP_06708964.1| DNA-binding protein [Streptomyces sp. e14]
gi|292833737|gb|EFF92086.1| DNA-binding protein [Streptomyces sp. e14]
Length = 325
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-------- 62
++R + D N WF A DV LG+ N +A++ H R L+T G
Sbjct: 28 GARVRRLTMPDGNHWFPAVDVCKRLGHTNPQKALSDHV-PEGHRETLETLTGGYGLSIPA 86
Query: 63 ----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ + +IS + L+ T P+ F++WV EV+ T+++ GSY +E +++
Sbjct: 87 GREWRRDLNVISLQGLVLLVNACTKPACAPFKQWVA-EVIETVQREGSYCLEEAEVQPAD 145
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+ + L+ + L + V +
Sbjct: 146 PGAPIAYAMPEQVAEAIVRLEAHNLQVDEELAVAQ 180
>gi|253682963|ref|ZP_04863750.1| BRO family, N- domain protein [Clostridium phage D-1873]
gi|253560889|gb|EES90351.1| BRO family, N- domain protein [Clostridium phage D-1873]
Length = 281
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 13/210 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE---AINAHCKGVAKRYPLKTEGGIQ 64
+FE NK+ I +KD + F ALGY +N C+ +K
Sbjct: 12 QFEGNKVEMI-EKDGQVLFELYSTGMALGYVKTNTINGKTYVQCRKERVSNTIKNAEIKP 70
Query: 65 KV----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V + ++E +Y ++++ + F +WV EVLPT+RKTG Y A + T
Sbjct: 71 LVQGGLKYLNEEMLYDFMLEAKTEKCKSFRKWVTSEVLPTIRKTGGYVANADLMVNTYFG 130
Query: 121 TVLRVHKHL-EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ HK + + L + + Q++ + D L ++K S + +
Sbjct: 131 ALDDTHKTIVKSLFENIENQQKQIIQLKDDNEILDKENDLLSGENLKWADRSLINALVRA 190
Query: 180 TQIGERLNPPQRA--RFLNKLLLKRGLQVS 207
G +L A +F ++L K + ++
Sbjct: 191 Y--GSKLGNFGEAWTKFKKEILYKHSININ 218
>gi|110803255|ref|YP_697476.1| BRO domain-containing protein [Clostridium perfringens SM101]
gi|110683756|gb|ABG87126.1| BRO family, N-terminal domain protein [Clostridium perfringens
SM101]
Length = 191
Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 27/157 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + +F +I T++ D I ++AKDVA L Y++ ++AIN K Y ++ E
Sbjct: 1 MNDLFIKKFNDEEIITLI-LDNRICWIAKDVAKILNYDDPSKAINQCIKAEKFEYGIEYE 59
Query: 61 ----------------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
K+ I E +Y + S LP F +W+ EVL
Sbjct: 60 VLAGDKLKEVKRLIGVTHISYLKQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVL 119
Query: 99 PTLRKTGSYSVE----APKLRATSASTVLRVHKHLEE 131
P LR G+YS+ L+ + + L L E
Sbjct: 120 PELRAKGTYSINKESYKDNLKYKNENLSLYTQDKLNE 156
>gi|148368935|ref|YP_001257065.1| bro-5 [Spodoptera litura granulovirus]
gi|147883448|gb|ABQ52057.1| bro-5 [Spodoptera litura granulovirus]
Length = 256
Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 21/125 (16%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ------------- 64
V+KD + +++A LGY+ ++AI H K K + + +Q
Sbjct: 22 VEKD-KFMYGGRNIAKFLGYKRPHKAIRDHVKPQWKCKFDEIQKRLQIYNNNSIPANWQP 80
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG-------SYSVEAPKLRAT 117
ISE VY L+++ L +A F +W+FEEVLP LRK G YS+ + +
Sbjct: 81 NTVFISEAGVYALIMRCKLHTADLFRQWLFEEVLPELRKNGRMVDDFCKYSLAHKQPTTS 140
Query: 118 SASTV 122
V
Sbjct: 141 IMEYV 145
>gi|302526534|ref|ZP_07278876.1| predicted protein [Streptomyces sp. AA4]
gi|302435429|gb|EFL07245.1| predicted protein [Streptomyces sp. AA4]
Length = 309
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 20 KDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+D + VA A A+GY + A+++ +T GG Q+V +I E ++ L+
Sbjct: 79 EDGRAYVVAGPFAKAMGYRQTKNALDSLDADEKGFAETETPGGRQRVAVIFEDGIWELIF 138
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTG-------------SYSVEAPKLRATSASTVLRVH 126
+STLPSA+ + V +L LR+TG SY+ EA +L A +
Sbjct: 139 RSTLPSAKALKSRVKA-ILRQLRETGVVDTRAQRFEIPRSYA-EALELAAKQTRELEAAE 196
Query: 127 KHLEELAKQAGLKDNQLLL----KVNRGVTKITGVDQLE 161
+ + EL +A L D L+ ++ R V K+ G+ + E
Sbjct: 197 QRVAELEPKADLADTFLVADGSTRLVREVAKLLGMREGE 235
>gi|260880940|ref|ZP_05403197.2| BRO family domain protein [Mitsuokella multacida DSM 20544]
gi|260849978|gb|EEX69985.1| BRO family domain protein [Mitsuokella multacida DSM 20544]
Length = 312
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
+ + II+E +Y L+ S L SA++F+ WV EVLP++RKTGSYS+ + + ST
Sbjct: 220 PRGLTIINESGMYSLIFGSKLESARRFKHWVTSEVLPSIRKTGSYSM-----KESDDSTS 274
Query: 123 LRVHKHLEELAKQAG 137
V + L+E+ KQ
Sbjct: 275 NTVDEKLDEIVKQIR 289
Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRII 69
E ++R I D + N WFV KDVA LGY AI H K + G + ++
Sbjct: 101 EFQQLRVIEDANGNPWFVGKDVAEDLGYLKERNAIREHVYDEDKALLKQKNG--MGIVVV 158
Query: 70 SE 71
+E
Sbjct: 159 NE 160
>gi|322689224|ref|YP_004208958.1| phage protein [Bifidobacterium longum subsp. infantis 157F]
gi|320460560|dbj|BAJ71180.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis
157F]
Length = 255
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ + FE ++ + FVA +A L YE++ + + ++ + T G
Sbjct: 3 NALQTLRFEDTEVTALDCNTDEPVFVASPIAKKLAYESAKDMLRNLDSDEKGKHIVPTLG 62
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQ----------KFERWVFEEVLPTLRKTGSYSVEA 111
G Q++ +I+ P + + + P A +F+RWV E++PT+ +TG Y V+
Sbjct: 63 GEQEMSVITLPGLIH-ALNNRRPGAVKDEATRNMVIRFQRWVNHELVPTVMRTGRYEVQR 121
Query: 112 PK--LRATSASTVLRVH 126
P+ L A +++V
Sbjct: 122 PQHLLEAAHHERMMQVE 138
>gi|215401251|ref|YP_002332555.1| BRO-A [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448751|gb|ACH88541.1| BRO-A [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 331
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 14/205 (6%)
Query: 1 MSTITPFEFESNKIRTIV--DKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---- 54
M+ + +F S + + DK+ +W +A A L Y N+AI +H K+
Sbjct: 1 MAVVKV-QFGSQDLEVVSLRDKEGQLWMLANPFAKILEYSVLNKAIWSHVSEPNKKNFEK 59
Query: 55 -----YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ + T + + I+ ++ L+ S +P AQ+F W+ ++L L TG Y +
Sbjct: 60 LQPFQHGMVTSSLHPQSKFINRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHM 119
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ A A + +H + +KD ++ +I + E +
Sbjct: 120 QTDA-PADIAEGMNVLHSVTNDGKNALWVKDLSEFKQIVALKDQIIAMKDEENKKLIVNL 178
Query: 170 SSDNDEYLTITQ-IGERLNPPQRAR 193
N + Q + + N AR
Sbjct: 179 QETNQNLIVANQGLLQAFNMVNEAR 203
>gi|15837306|ref|NP_297994.1| hypothetical protein XF0704 [Xylella fastidiosa 9a5c]
gi|9105588|gb|AAF83514.1|AE003913_10 phage-related protein [Xylella fastidiosa 9a5c]
Length = 210
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 14/132 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPL---------KTEGGIQ 64
I+D+D A D+A ALGY++++ + H + L + +
Sbjct: 17 IIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTYQMSLVVNLTVKGFGSGNSEK 76
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTV 122
VR+ S + + + + A F RWV + EVLP++RKTGSY+ + +
Sbjct: 77 PVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGTLVNDDVLCAI 136
Query: 123 LRVHKHLEELAK 134
+ + L +
Sbjct: 137 WILCSQFKSLHE 148
>gi|289770575|ref|ZP_06529953.1| DNA-binding protein [Streptomyces lividans TK24]
gi|289700774|gb|EFD68203.1| DNA-binding protein [Streptomyces lividans TK24]
Length = 325
Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 12/204 (5%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTEGG 62
++R + + WF A DV LGY + +A+ H + V + L G
Sbjct: 28 GARVRRLTMPGGSHWFPAADVCKELGYTTTRKALLDHVPEEHRDSLETVTGSHSLSIPAG 87
Query: 63 IQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ +++I + L+ T P+ F++WV EV+ T+++ GSYS++ +++
Sbjct: 88 RKWRRDLQLIDLQGLILLVNACTKPACAPFKQWVA-EVVETVQREGSYSLDEAEVQPVEP 146
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ + L+ + L L + T + M + +
Sbjct: 147 GAPIAYSMPDQVADAIVRLEAHNLKLDEELAEGQRTSIALQREMLATQQATLAVQQSTLA 206
Query: 180 TQIGERLNPPQRARFLNKLLLKRG 203
Q + A + L+L +G
Sbjct: 207 VQQAMVHALERIADRFDTLVLHQG 230
>gi|73663253|ref|YP_302034.1| putative prophage antirepressor [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495768|dbj|BAE19089.1| putative prophage antirepressor [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 207
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI 63
I F F+ +IR I +KD W +A DVA ALGY ++ + + T G
Sbjct: 2 IKEF-FDGKQIRFI-EKDNEYWAIAGDVAKALGYSHTPHMTRLLDVSEKAVHNVDTLKGK 59
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
QK IISE +Y + S AQ+F++WV ++V+ LR+
Sbjct: 60 QKAIIISEVGIYEAIWNSRRNEAQEFKKWV-KQVIKELRQ 98
>gi|298695301|gb|ADI98523.1| putative prophage antirepressor [Staphylococcus aureus subsp.
aureus ED133]
Length = 213
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAK---RYPLKTEGG 62
F + +IR I +K+ W +A DVA LG+ ++ A + H +G K K
Sbjct: 6 FNNKEIRFI-EKNNEYWAIATDVAKVLGFRDAFNATKYLPEHVRGTLKGSTTSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR---KTGSYSVEAPKLRATSA 119
Q +I+E +YRL+++S A F+ W+ +VL LR K Y V +
Sbjct: 65 YQDYTVINEKGIYRLVMRSNKAEALDFQDWIC-DVLVELRTSTKLKEYEVFHMLDKEKQK 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ + +E ++K+ K + N+ V+ I G ++ +
Sbjct: 124 EAMGNLKNGIEAISKKDYCKAQTI---SNKAVSNIFGFPKMVKKED 166
>gi|160915526|ref|ZP_02077737.1| hypothetical protein EUBDOL_01534 [Eubacterium dolichum DSM 3991]
gi|158432646|gb|EDP10935.1| hypothetical protein EUBDOL_01534 [Eubacterium dolichum DSM 3991]
Length = 237
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 86/226 (38%), Gaps = 8/226 (3%)
Query: 1 MSTITPFEFE--SNKIRTIVDKDQNIWFVAKDVATALGYEN--SNEAINAHCKGVAKRYP 56
M+ ++ F + + KIR + ++D +I +D A LG+ ++ + V +
Sbjct: 1 MNKLSTFRNDELNLKIRAMENEDGSISVNLEDAARGLGFTTVATSGNVVVRWNRVNQYLK 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ I EP Y L +K+ +A+KF+ WV +VLP +R+TG Y +
Sbjct: 61 EFNVPTCGRDDFIPEPIFYLLAMKANNDTAKKFQIWVATDVLPQVRRTGGYRLPQTPEEK 120
Query: 117 TS--ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSD 172
+ +E++ ++ ++ L N T V E D+ + +
Sbjct: 121 IRLLLEANQSANTKIEKVEERVSNLEDNRFLNPNEYGYLNTQVSSRIREVKDVHQMQLNR 180
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
IG + R +++ K +V + P+
Sbjct: 181 RQNSELFKAIGRDIKTITNVRCRSQIRYKDFDKVLDFVKTWEPSKA 226
>gi|160898528|ref|YP_001564110.1| prophage antirepressor [Delftia acidovorans SPH-1]
gi|160364112|gb|ABX35725.1| prophage antirepressor [Delftia acidovorans SPH-1]
Length = 317
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 11/128 (8%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
F F IRT ++ IWF+AKDV TALG A + L +E G +
Sbjct: 18 QTFHFGDIPIRT-FPRNGVIWFMAKDVCTALGISRHKLATGKLAEDQRCTVRLASEPGRK 76
Query: 65 K----VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
V ++ ++ L+ S P ++F+RWV +VL G+ A + +
Sbjct: 77 PRREAVAAVNADGLHALIQASPSPETKRFKRWVQRKVL------GAKDAPAKDSKPKYKT 130
Query: 121 TVLRVHKH 128
R KH
Sbjct: 131 KSGRDAKH 138
>gi|22549476|ref|NP_689249.1| BRO-C [Mamestra configurata NPV-B]
gi|22476655|gb|AAM95061.1| BRO-C [Mamestra configurata NPV-B]
Length = 326
Score = 88.9 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC---------KG 50
M+ + F + ++ ++ D + +W +A A L Y NS AI
Sbjct: 1 MAVVKVNFGNQEFEVVSVKDCNNQLWLLANPFARILQYANSRNAIAKFVSVNNQLQLHDL 60
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--S 108
A R + + I+ ++ L+ S +P A++F WV ++L L TG Y
Sbjct: 61 KAPRIEALASSIHPQSKFINRAGLFELIQGSKMPKAKEFRNWVNSDLLIKLSDTGEYRMQ 120
Query: 109 VEAPKLRATSASTVLRVH---------KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+AP + + + + ++ + L E KDN K+N +T ++
Sbjct: 121 TDAPTSASEAMNVIHKICNNGQEPSWREELNEFKHIINTKDN----KINELTVSLTEANE 176
Query: 160 LEAMDIKHLPSSDN 173
++L S+ N
Sbjct: 177 ALISLSQNLSSALN 190
>gi|20336382|gb|AAM18340.1| baculovirus repeat open reading frame a [Helicoverpa armigera NPV]
Length = 140
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 23/140 (16%)
Query: 1 MSTITPFEFESNKIR--TIVDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRYPL 57
MS +T +F ++ TI + W VA A AL Y +N+AI G K +
Sbjct: 1 MS-LTKIQFGDKEVEPNTIAY-NGEKWMVANPFAEALNYSRANKAILEKVSDGNRKTFDQ 58
Query: 58 KTEGGI----------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
I K + I+ V+ L++ S + A++F+ W ++LPTL
Sbjct: 59 IKPHRIGHDRTGESSVIPRNIQAKTKFINRAGVFELIMSSHMECAKRFQAWNNNDLLPTL 118
Query: 102 RKTGSYSV--EAPKLRATSA 119
+ G Y + +AP A
Sbjct: 119 CQEGEYKMARDAPANIAHKM 138
>gi|285002437|ref|YP_003422501.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343697|gb|ACH69512.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 281
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 25/152 (16%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------------KGV 51
+ E + T VD++ W VA A AL Y N N AI H +G
Sbjct: 33 IYCNEELNVITKVDENGEPWMVANPFADALNYSNVNRAIRIHVSECNVKNFEYFRSLRGS 92
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+ K + I++ + L++KS + A +F W+ E+ P+L
Sbjct: 93 IRDANDSLFSLHPKTKFINKAGLLELVLKSRMRYAAEFRYWLVNELFPSL---------- 142
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
K+ A + RV ++ Q KD+QL
Sbjct: 143 -KINALDDFEMWRVDPKNKQTLMQQLPKDDQL 173
>gi|187935575|ref|YP_001886948.1| BRO domain protein [Clostridium botulinum B str. Eklund 17B]
gi|187723728|gb|ACD24949.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
17B]
Length = 237
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALG-YENSNEAINAHCKGVAKRYP- 56
MS I F E K +RTI + D +I A+D A G YE I + +
Sbjct: 1 MSNIQIFNNEDLKLKVRTIQNGDGSISINAEDTAIGFGWYEEKAGKIYPRWRTINGYIKE 60
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ K I E Y L +K+ AQ F++W+ +V+P++RKTGSY +
Sbjct: 61 FGFSQDVAKEDYIPESLFYMLGMKANNKVAQDFQKWLATKVIPSVRKTGSYQLPKISKEL 120
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVN 148
+ + + LE K LKDN L ++
Sbjct: 121 QAIFMIDGKQQRLENEVK--DLKDNMPLFNID 150
>gi|28198900|ref|NP_779214.1| hypothetical protein PD1002 [Xylella fastidiosa Temecula1]
gi|182681603|ref|YP_001829763.1| prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|28056998|gb|AAO28863.1| phage-related protein [Xylella fastidiosa Temecula1]
gi|182631713|gb|ACB92489.1| Prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|307580037|gb|ADN64006.1| prophage antirepressor-like protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 210
Score = 88.5 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 28/206 (13%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRY 55
M+ + + F + +I+D+D + A D+A ALGY + A+ N H +
Sbjct: 1 MTQLPSAVCFSGQSL-SIIDRDGTPYLTAADLARALGYADER-AVSRIYNRHSEEFTVEM 58
Query: 56 PL---------KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKT 104
L + + VRI S + + + + A F RWV + EVLP++RKT
Sbjct: 59 SLVVNLTTKGFGSGNSEKPVRIFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKT 118
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
GSY+ + + + H + GL + K+ + ++ + G ++
Sbjct: 119 GSYTATGALVNDDVLYNIWFLCCHFK------GLYEMSFENKIPQALSCL-GARKMGGRL 171
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQ 190
HL + L I + L P
Sbjct: 172 YTHLVDGMDGGVLRIE---KALGPHM 194
>gi|294836533|ref|ZP_06781216.1| gp54 protein [Acinetobacter sp. 6013113]
gi|294860016|ref|ZP_06797785.1| gp54 protein [Acinetobacter sp. 6013150]
Length = 118
Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T GGIQK++ I+EP++YR++ +S A F+ WVF EVLP++RKTGSYS
Sbjct: 6 TPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKTGSYSARQSAYEE 65
Query: 117 TS 118
+
Sbjct: 66 LN 67
>gi|145642457|ref|ZP_01798009.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
R3021]
gi|145272850|gb|EDK12744.1| hypothetical protein CGSHiR3021_00482 [Haemophilus influenzae
22.4-21]
Length = 67
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
+ F F+SN +R I D ++ WF A DV LGY N +AI+ HCK K++
Sbjct: 6 QFSAFTFKSNSVRVITDNNREPWFCANDVCDILGYSNPRDAISKHCKENKKQHS 59
>gi|228474634|ref|ZP_04059365.1| BRO domain protein [Staphylococcus hominis SK119]
gi|228271297|gb|EEK12665.1| BRO domain protein [Staphylococcus hominis SK119]
Length = 213
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA---INAHCKGVAK---RYPLKTEGG 62
F +IR I +KD W +A D+AT L + +S A + H +G K K
Sbjct: 6 FNGTEIRFI-EKDGEHWAIASDIATVLDFRDSFNATKNLPNHVRGTLKGSTTSDKKKARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSA 119
Q +I+E +YRL+++S A+ F+ W+ +VL LR+ TG EA ++ +
Sbjct: 65 YQDYTVINEKGIYRLIMRSNKKEAEDFQDWIC-DVLVELRQATGLKDYEAFRMTDKQIQK 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGV 151
+ ++ + + +K N + K +
Sbjct: 124 DAMSKLKEANTTAKRVDHIKANTISDKATSTL 155
>gi|215401299|ref|YP_002332603.1| BRO-B [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448799|gb|ACH88589.1| BRO-B [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 335
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 22/272 (8%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ + F E K+ ++ D + +W +A A L Y N+ +AI+ + ++Y +
Sbjct: 1 MAVVKVNFGNEELKVVSVRDSNDQLWLLANPFARILQYANAPKAISTYVGNNNQKYFEEL 60
Query: 60 EGGI------------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+ K + I+ ++ L+ S +P AQ+F WV ++L L TG Y
Sbjct: 61 QSSQAGQTYVTSSYVQTKSKFINRAGLFELIQGSKMPKAQEFRNWVNSDLLVKLSDTGEY 120
Query: 108 --SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+AP + + + V +V + +E Q + + +++ + V EA
Sbjct: 121 RMQTDAPTAASEAMNVVHKVCNNGQEAPWQVEFDEIKHVIQKKDDKIEELTVSLTEANGA 180
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER--G 223
L + L + + ++AR + + + +V V+ P +
Sbjct: 181 LILLLQNLSSALNMVNEARK--DSEKAR---QDMTQLANRVIDVAQDVVVKPADPQLRHS 235
Query: 224 GKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNE 255
+CD+ Q K L L +E
Sbjct: 236 LAVCDLGNDQYAFIRPQKKSLKRSLDRLLVDE 267
>gi|325912804|ref|ZP_08175183.1| BRO family, N-terminal domain protein [Lactobacillus iners UPII
60-B]
gi|325477935|gb|EGC81068.1| BRO family, N-terminal domain protein [Lactobacillus iners UPII
60-B]
Length = 135
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
S I F FE N+I+ + + +F +DV L +++ A + T
Sbjct: 6 SGIQTFYFEHNRIQMMA-IGSDPYFNLEDVCEILKIKDTKRAKARLDEQGVCDAMTLTSS 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G QK ISE ++YRL+ KS KF WV EVLP
Sbjct: 65 GFQKKDFISETNLYRLIFKSRRLENIKFAVWVMSEVLP 102
>gi|224477019|ref|YP_002634625.1| hypothetical protein Sca_1535 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421626|emb|CAL28440.1| hypothetical protein SCA_1535 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 209
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG------ 62
F +IR I +KD W VA DVA LGY ++ + K + +K
Sbjct: 6 FNDKEIRFI-EKDDEYWAVAGDVAKVLGYSQTSNMLRMIDKEDVTTHNVKVTSNSKFARK 64
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TG--SYSVEAPKLRATSA 119
Q +ISE +Y + S AQ+F++WV ++V+ LR+ TG Y +
Sbjct: 65 TQPASVISEYGIYEAIWNSRRDEAQEFKKWV-KQVIKELRQATGLKGYEAFRMLDKQKQK 123
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
+ + + + + +K N + N+ V+ G ++ +
Sbjct: 124 EAMAIIQRAYKSDKQINYIKANAI---ANKAVSTAFGYKKMIVKE 165
>gi|77747675|ref|NP_779228.2| hypothetical protein PD1016 [Xylella fastidiosa Temecula1]
gi|182681622|ref|YP_001829782.1| prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|182631732|gb|ACB92508.1| Prophage antirepressor-like protein [Xylella fastidiosa M23]
gi|307580057|gb|ADN64026.1| prophage antirepressor-like protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 206
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 20/184 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLK---TEGGIQ--KVRI 68
I+D+D + A+++A ALGY + + ++ T G Q +RI
Sbjct: 17 IIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQARDIRI 76
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
S + + + + A F RWV + EVLP++RKTGSY+ + + +
Sbjct: 77 FSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGALVNDDVLYNIWFLC 136
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
H + GL + K+ + ++ + G ++ HL + L I + L
Sbjct: 137 CHFK------GLYEMSFENKIPQALSCL-GARKMGGRLYTHLVDGMDGGVLRIE---KAL 186
Query: 187 NPPQ 190
P
Sbjct: 187 GPHM 190
>gi|28057012|gb|AAO28877.1| phage-related protein [Xylella fastidiosa Temecula1]
Length = 294
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 20/184 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLK---TEGGIQ--KVRI 68
I+D+D + A+++A ALGY + + ++ T G Q +RI
Sbjct: 105 IIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMTCVVKLTPQGEQARDIRI 164
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
S + + + + A F RWV + EVLP++RKTGSY+ + + +
Sbjct: 165 FSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTGSYTATGALVNDDVLYNIWFLC 224
Query: 127 KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
H + GL + K+ + ++ + G ++ HL + L I + L
Sbjct: 225 CHFK------GLYEMSFENKIPQALSCL-GARKMGGRLYTHLVDGMDGGVLRIE---KAL 274
Query: 187 NPPQ 190
P
Sbjct: 275 GPHM 278
>gi|71900481|ref|ZP_00682611.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71729721|gb|EAO31822.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 197
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 9/146 (6%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPL----KTEGGIQKVRII 69
I+D+D A+D+A ALGY + + H + + L T G + R+
Sbjct: 17 IIDRDGVPHLSARDLAHALGYADERSVLRIYNRHSEEFTYQMTLVVNLTTVTGDKPTRLF 76
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+ + + + + A F RWV + E +P++RKTG YS P + ++
Sbjct: 77 NPRGCHMVSMFARTSVAAAFRRWVLDVLEFMPSIRKTGGYSASHPPAVTLTEEEAFNLYA 136
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTK 153
L +A + + + + R +
Sbjct: 137 LLRMVAGHLSRERIEPIEQALRLMHS 162
>gi|253682965|ref|ZP_04863752.1| prophage pi1 protein 08 [Clostridium phage D-1873]
gi|253560891|gb|EES90353.1| prophage pi1 protein 08 [Clostridium phage D-1873]
Length = 256
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 33/246 (13%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALG--Y---ENSNEAIN-AHCKGVAKRYP 56
I F+ ++ + + + F A+ VA + Y +N E + ++
Sbjct: 5 QIQIFKNNLFEV-AVKLDNGEMVFDAERVAKGIKGKYVQNKNGKEYVRWEKINNDLVKFN 63
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G K I E VY L++ A KF++W+ +V+P++RK G Y E
Sbjct: 64 FPTLSG--KGDFIPESAVYLLIMNGENDYAVKFQQWLAVDVIPSIRKHGVYMAENVIEEI 121
Query: 117 -TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI---------- 165
T T++++ +L+E ++ L + QL KI D++E
Sbjct: 122 LTDPDTIIKLATNLKEERQKRKLVEKQL----EEAKPKINFADKIEFTKASISMKKFADL 177
Query: 166 ---------KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
K L N EYL + R + + ++ G + + T
Sbjct: 178 MNIKNFGRNKLLQWLRNKEYLNKSNQPYRQYIEREIFETKERVVDLGFKGEVIKTTTYIT 237
Query: 217 PKGEER 222
KG+
Sbjct: 238 GKGQTY 243
>gi|9631082|ref|NP_047752.1| Ld-bro-k [Lymantria dispar MNPV]
gi|3822350|gb|AAC70301.1| Ld-bro-k [Lymantria dispar MNPV]
Length = 238
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 1 MSTITP--FEFES--NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-- 54
MS + F F +R ++ +Q + FVAKD+A +L YE AI H K
Sbjct: 1 MSQVKIGQFRFGEDAFTLRYVLAAEQPVKFVAKDIARSLKYEKPANAIAKHVDDKYKSAF 60
Query: 55 -----YPLKTEGG-----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
L+ + G + +I + V +L ++S L +A + + W +E VLP
Sbjct: 61 EQLCFDDLRVKQGDPLYLHKSTILIDKIGVIQLFMRSKLHNAAELQNWFYERVLPQ 116
>gi|71902151|ref|ZP_00684175.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728085|gb|EAO30288.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 197
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ + + F + +I+D+D A+D+A ALGY + + H + +
Sbjct: 1 MTQLPSAVCFSGKSL-SIIDRDGVPHLSARDLAHALGYADERSVLRIYNRHSEEFTYQMT 59
Query: 57 L----KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVE 110
L T G + R+ + + + + + A F RWV + E +P++RKTGSYS
Sbjct: 60 LVVNLTTVTGDKPTRLFNPRGCHMVSMFARTSVAAAFRRWVLDVLEFMPSIRKTGSYSAS 119
Query: 111 APKLRATSASTVLRVHKHLEELA 133
P + ++ L +A
Sbjct: 120 HPPAVTLTEEEAFNLYALLRMVA 142
>gi|265754000|ref|ZP_06089355.1| antirepressor [Bacteroides sp. 3_1_33FAA]
gi|263235714|gb|EEZ21238.1| antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 208
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 16 TIVDKDQNIWFVAKDVATALGYE-------NSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
T+ +N F+AK+VA + Y N+ + + + + T GG Q+V
Sbjct: 34 TVYGTAENPLFLAKEVAECIDYAKRSNGSYNTTMMLQSVDEEEKVANIVDTLGGNQQVWF 93
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
++E +Y +L++S P A++F++ V +E+L +RKTG Y A K T + R
Sbjct: 94 LTEDGLYEVLMQSRKPIAKEFKKGV-KEILKIIRKTGGYL--ATKQDDTPEEIMARALTI 150
Query: 129 LE 130
+
Sbjct: 151 AQ 152
>gi|85702815|ref|ZP_01033919.1| hypothetical BRO family protein [Roseovarius sp. 217]
gi|85671743|gb|EAQ26600.1| hypothetical BRO family protein [Roseovarius sp. 217]
Length = 163
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 45 NAHCKGVAKRYPLKTEG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
H +K EG G + + I++E +Y+L+++S P A+ F+ WV VLP++RK
Sbjct: 78 RGHRTDTSKVSRSHFEGRGGKPMVIVTESGLYKLVMRSDKPEAKAFQDWVTGTVLPSIRK 137
Query: 104 TGSYSVEAPKLRATSASTVLR 124
G Y + R +R
Sbjct: 138 DGGYIMGEGDDRPDVLRGPVR 158
>gi|312873776|ref|ZP_07733820.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
gi|311090657|gb|EFQ49057.1| BRO family, N-terminal domain protein [Lactobacillus iners LEAF
2052A-d]
Length = 135
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTE 60
S I F FE N+I+ + + +F +DV L +++ A +GV L T
Sbjct: 6 SGIQTFYFEHNRIQMMA-IGSDPYFSLEDVCEILKIKDTKRAKTRLDEQGVCDAMTL-TS 63
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
G QK ISE ++YRL+ KS KF W+ EVLP
Sbjct: 64 SGFQKKDFISETNLYRLIFKSHRLENIKFAVWMTSEVLP 102
>gi|239507365|ref|YP_002939673.1| hypothetical protein CUR004 [Staphylococcus phage phiPVL-CN125]
gi|238683990|gb|ACR54193.1| hypothetical protein CUR004 [Staphylococcus phage phiPVL-CN125]
Length = 113
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 1 MSTITPFE---FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRY 55
M + F+ F +I TI + WF A +VA LGY N +AI+ H K GV
Sbjct: 1 MQALQRFQNSQFGDLEILTI---EGKQWFPATEVAMTLGYSNPRDAISRHVKRRGVVNHD 57
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKST 82
+ + G Q + I E ++YRL+ +S
Sbjct: 58 VIDSLGRKQNKKFIDEGNLYRLISRSK 84
>gi|302876357|ref|YP_003844990.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579214|gb|ADL53226.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 266
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 91/228 (39%), Gaps = 27/228 (11%)
Query: 1 MST-ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-- 56
M+ I F+ E ++RTI++ D +I A+DVA G+ ++IN + R+
Sbjct: 1 MNNEIKIFQNSEIGEVRTILNDDGSISVNAEDVARGFGWSRI-QSINGK-DYESIRWERM 58
Query: 57 ------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
L + + I E Y L +K+ +AQKF+ W+ ++V+P++RK G Y E
Sbjct: 59 NAFINELGFHPQVGEGDFIPETLFYLLGMKANNETAQKFQMWLAKDVIPSIRKYGLYITE 118
Query: 111 APKLRATSA--------STVLRVHKHLEELAKQAGLKDNQLLLKVN-------RGVTKIT 155
S ++ + L +Q ++ + K R +
Sbjct: 119 ELLRDKERMLDTIKSCRSDLMSKDAEINYLERQLKPYEDYIHRKNVINCKLRPRTGQTES 178
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRG 203
+ L + H ++ ++ + LN + L KL+ +R
Sbjct: 179 YITDLLPQILLHYIKTEPKCIISENEEIYILNAKMVIKELRKLIYRRN 226
>gi|116326075|ref|YP_803400.1| baculovirus repeated ORF-a [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180813|gb|ABI13790.1| baculovirus repeated ORF-a [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 243
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-------- 48
M+ + F+F ++ +R ++DKD + FVAKD+A++LGYE + A+ +
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVLDKD-IVKFVAKDIASSLGYEKFSNAVKKYVDIKYKSTY 59
Query: 49 -----KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
K KR L ++S V +L+ +S +P+A +F+ W ++ VLP +
Sbjct: 60 GDQSFKNNVKRGDLLYL--QPHTILLSNIGVLQLISRSKMPNAAEFQDWFYDHVLPACLR 117
Query: 104 T 104
Sbjct: 118 N 118
>gi|167836444|ref|ZP_02463327.1| BRO family, N-terminal domain protein [Burkholderia thailandensis
MSMB43]
Length = 71
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+ISE +Y L+++S P A++F +WV EVLP++RK G Y ++ A +
Sbjct: 1 MISESGLYALVMRSNKPIAREFRKWVTSEVLPSIRKHGMYMMQEVAREAVEDPMQILARA 60
Query: 128 HLEELAKQAG 137
+ + G
Sbjct: 61 LVVTNERLGG 70
>gi|126652616|ref|ZP_01724780.1| prophage Sa05, BRO domain protein [Bacillus sp. B14905]
gi|126590607|gb|EAZ84724.1| prophage Sa05, BRO domain protein [Bacillus sp. B14905]
Length = 206
Score = 85.8 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---VAKRYPLKTE 60
I + +IR + + + W +AKD+A ALGY + ++A+ H K + +
Sbjct: 3 IKTENWLDYEIRFV-EIEGEWWGIAKDIADALGYVD-SQAMVRHIKSKFLQTVKLTVGKN 60
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG---SYSVEAPKLRAT 117
G K ISE +Y+ + +S P A+ FE W+F EV+ TLR++ + + +
Sbjct: 61 KGNGKFTAISEQGIYKAITRSQRPEAEAFEDWLF-EVVKTLRQSSGLEGFQIFRMLDKVH 119
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKV 147
T+ ++ + L E + +K N + K
Sbjct: 120 QKETMAKLQQSLLEPTTVSFIKANTIANKA 149
>gi|22549422|ref|NP_689195.1| BRO-A [Mamestra configurata NPV-B]
gi|22476601|gb|AAM95007.1| BRO-A [Mamestra configurata NPV-B]
Length = 353
Score = 85.4 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 45/190 (23%)
Query: 1 MSTITPFEFESNKIRTIV--DKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-- 56
M+ + +F S + + D++ +W +A A L Y +N+A+ H +R+
Sbjct: 1 MAVVKV-QFGSQDLEVVSLRDEEGQLWMLANPFAKILEYSKANKAVATHVSSQNQRFWEE 59
Query: 57 -----------------------------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQ 87
+ + K + I+ ++ L+ S +P AQ
Sbjct: 60 LKSYHSGTTSMTSSSQHENISSPQFEEIGMTSSSVQAKSKFINRSGLFELIQASIMPKAQ 119
Query: 88 KFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVLRV---------HKHLEELAKQA 136
+F W+ ++LP L + G+Y++ +AP + V V K L E +
Sbjct: 120 EFRNWINSDLLPKLCENGNYNMATDAPMEIVEGMNAVHSVTNDGKNALWLKDLSEFKQIV 179
Query: 137 GLKDNQLLLK 146
LKD + +K
Sbjct: 180 ALKDQIIAMK 189
>gi|254304004|ref|ZP_04971362.1| possible bacteriophage antirepressor [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148324196|gb|EDK89446.1| possible bacteriophage antirepressor [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 220
Score = 85.4 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 15 RTIVDKD-------QNIWFVAKDVATALGYENSN--EAINAHCKGVAKRYPLKTEGGIQK 65
R + +K+ +N F+A+DVA + Y+ + +N P+ G ++
Sbjct: 10 RVVFEKNFRVYGDFENPLFLARDVAEWIEYDKEKVGQMLNTIDNDEKMTSPIYYSGQVRN 69
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+ ++E +Y +L++S P A+++++ V +E+L +RKTG+Y+ T A +L
Sbjct: 70 MWFVTEDGLYEVLMQSRKPIAKQWKKKV-KEILKEIRKTGTYT-----RPLTPAEQLLAQ 123
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
+ + ++ + + + N IT
Sbjct: 124 AQLMVDMENRLNILEKNNARLENNLRRTIT 153
>gi|310828617|ref|YP_003960974.1| antirepressor [Eubacterium limosum KIST612]
gi|308740351|gb|ADO38011.1| antirepressor [Eubacterium limosum KIST612]
Length = 190
Score = 85.4 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK--GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WFV KDV ALGY++ A+ H + V KR QK+ +++E + L++
Sbjct: 80 WFVVKDVCRALGYKSHCGALRTHVRSEDVTKREIRDANNHRQKMLVVNERGLDALILGGR 139
Query: 83 LPSAQKFERWVFEEVLPTLR 102
L +A F+ ++ +LP++R
Sbjct: 140 LHAAPFFKGYITGVILPSIR 159
>gi|169342601|ref|ZP_02863653.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
gi|169299373|gb|EDS81440.1| BRO domain protein [Clostridium perfringens C str. JGS1495]
Length = 259
Score = 85.4 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 1 MSTITPFEFE--SNKIRTIVDKDQNIWFVAKDVATALGYE-----NSNEAINAHC-KGVA 52
M+ + FE + +RTI + D +I A+D A LG+ N E N +
Sbjct: 1 MNNLMIFENKELGIDVRTIKNDDGSISINAEDGAIGLGWTRKQTINGKEYFNVLWARMNG 60
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L K I E Y L +K+ A+KF+ W+ EV+P +RK+G Y +E
Sbjct: 61 FIKELGFAHECAKDDFIPESLFYLLAMKANNEVARKFQTWLAVEVIPAIRKSGQYQLEK- 119
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
+ TSA + + KQ + N +L+ + K+
Sbjct: 120 --KPTSAIDLFEAQVQAFKEVKQQINEVNHRVLEASAKSDKL 159
>gi|307711150|ref|ZP_07647572.1| BRO family, N-terminal domain protein [Streptococcus mitis SK321]
gi|307617112|gb|EFN96290.1| BRO family, N-terminal domain protein [Streptococcus mitis SK321]
Length = 194
Score = 85.4 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
QN FVA +VA + +N+ + + Y + G +++ +++E VY +L +S
Sbjct: 48 QNPLFVAVEVAEMIEIQNTTDLLKRVDDDEKLTYVISRAGQKREMNMLTEFGVYEVLSQS 107
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLRVHKHLEELAKQAG 137
P A++F++ V + +L +R G Y VE P+ + T+ ++ + +A
Sbjct: 108 RKPLAKEFKK-VVKHILKEIRLNGYYMAGELVEEPQTTIKAPDTLAEAERYYIDTLAKA- 165
Query: 138 LKDNQLLLKVNRGVTKITG 156
+ + Q + + +R +K+T
Sbjct: 166 IAEAQNMDEKSRLTSKLTK 184
>gi|225573757|ref|ZP_03782512.1| hypothetical protein RUMHYD_01959 [Blautia hydrogenotrophica DSM
10507]
gi|225038902|gb|EEG49148.1| hypothetical protein RUMHYD_01959 [Blautia hydrogenotrophica DSM
10507]
Length = 227
Score = 85.4 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 16/137 (11%)
Query: 9 FESNKIRTIVDKDQ-NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV- 66
FE +R I K++ IWF A DV LG N + + + K++ + G+
Sbjct: 5 FEERNVRIICSKNRSEIWFSAIDVGEELGIANIRDTLRNIDRSEKKKFTNEMISGVGVFY 64
Query: 67 -------------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
+SE VY + +S P A+ F +WV + VL +R G Y ++
Sbjct: 65 TRNFNSPLNNYGETFVSEEAVYNMAFRSNKPEAKLFTKWVTK-VLKQIRVNGFYVLDGKG 123
Query: 114 LRATSASTVLRVHKHLE 130
+ + +E
Sbjct: 124 EERLKTREETKKVRRME 140
>gi|9635359|ref|NP_059257.1| ORF109 [Xestia c-nigrum granulovirus]
gi|6175753|gb|AAF05223.1|AF162221_109 ORF109 [Xestia c-nigrum granulovirus]
Length = 308
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 66/176 (37%), Gaps = 19/176 (10%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRY---------------PLKTEGGIQKVRIIS 70
VA A AL Y N N AI H ++ K + I+
Sbjct: 1 MVANPFAEALNYSNVNRAIRVHVSNQNQKCMEELRSDRCGLTDDSSCLPRNIQAKTKFIN 60
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLE 130
V+ L+ S +P+A++F+ W ++LPTL G Y++ + VH
Sbjct: 61 RAGVFELINASEMPAAKRFKAWNSNDLLPTLCTDGEYNM-VKNAPMEINQGMNAVHAATT 119
Query: 131 ELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ +KD L ++ + + + + ++ + K L + D + + + L
Sbjct: 120 NGVEAPWIKD---LTELKQKIVEKDTIIAVKDEENKKLTVALQDANQNLIEANKGL 172
>gi|71899742|ref|ZP_00681893.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71730437|gb|EAO32517.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 213
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 16/145 (11%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP 56
M+ + + F + +I+D+D A D+A ALGY++++ + H
Sbjct: 1 MTQLPSAVCFSGKSL-SIIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTSEMS 59
Query: 57 LKTE---------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTG 105
L + + VR+ S + + + + A F RWV + EVLP++RKTG
Sbjct: 60 LTVKLTVKGFGCGNSEKPVRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEVLPSIRKTG 119
Query: 106 SYSVEAPKLRATSASTVLRVHKHLE 130
SY T K L+
Sbjct: 120 SYVSNDTVSLTTVRRCGTVAAKELK 144
>gi|307126173|ref|YP_003878204.1| BRO family, N- domain-containing protein [Streptococcus pneumoniae
670-6B]
gi|306483235|gb|ADM90104.1| BRO family, N- domain protein [Streptococcus pneumoniae 670-6B]
Length = 194
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
QN FVA +VA + +N+ + + Y + G +++ +++E VY +L +S
Sbjct: 48 QNPLFVAVEVAEMIEIQNTTDLLKRVDDDEKLTYVISRAGQKREMNMLTEFGVYEVLSQS 107
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLRVHKHLEELAKQAG 137
P A++F++ V + +L +R G Y VE P+ + T+ ++ + +A
Sbjct: 108 RKPLAKEFKK-VVKHILKEIRLNGYYMAGELVEEPQTTIKAPGTLAEAERYYIDTLAKA- 165
Query: 138 LKDNQLLLKVNRGVTKIT 155
+ + Q + + +R +K+T
Sbjct: 166 IAEAQNMDEKSRLTSKLT 183
>gi|9630900|ref|NP_047497.1| BRO-b [Bombyx mori NPV]
gi|3745919|gb|AAC63766.1| BRO-b [Bombyx mori NPV]
Length = 239
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-- 54
M+ + F+F + +R ++ +Q + FVAKD+A +L Y N +A+ H K
Sbjct: 1 MAQVKIGQFKFGQDEFTLRYVLGDEQPVKFVAKDIARSLKYVNYEKAVRVHVDVKYKTTY 60
Query: 55 ----YPLKTEGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ E ++ + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 61 EQACINISKENRVKHGDPLYLSPQTILLDKIGVIQLFMRSKMHNAAELQNWFYEHVLPQ 119
>gi|62179812|ref|YP_216229.1| hypothetical protein SC1242 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127445|gb|AAX65148.1| Hypothetical protein HI1418 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322714278|gb|EFZ05849.1| hypothetical protein SCA50_1330 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 97
Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 8 EFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNEA-INAHCKGVAKRYPLKTEGGIQK 65
+FE + +R + + WF KDV L ++ +GV K + T GG Q+
Sbjct: 18 KFEGKHDVR-VQVINGEPWFCLKDVCEILSVSVASPTRFQMSMEGVTK-NVIPTGGGKQQ 75
Query: 66 VRIISEPDVYRLLVKSTLPSAQ 87
+ ++E ++YR++ +S P A+
Sbjct: 76 LTFVNESNLYRVIFRSNKPEAR 97
>gi|237651076|ref|ZP_04525328.1| hypothetical protein SpneC1_10266 [Streptococcus pneumoniae CCRI
1974]
gi|237821189|ref|ZP_04597034.1| hypothetical protein SpneC19_02501 [Streptococcus pneumoniae CCRI
1974M2]
Length = 256
Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKS 81
QN FVA +VA + +N+ + + Y + G +++ +++E VY +L +S
Sbjct: 110 QNPLFVAVEVAEMIEIQNTTDLLKRVDDDEKLTYVISRAGQKREMNMLTEFGVYEVLSQS 169
Query: 82 TLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLRVHKHLEELAKQAG 137
P A++F++ V + +L +R G Y VE P+ + T+ ++ + +A
Sbjct: 170 RKPLAKEFKK-VVKHILKEIRLNGYYMAGELVEEPQTTIKAPDTLAEAERYYIDTLAKA- 227
Query: 138 LKDNQLLLKVNRGVTKIT 155
+ + Q + +R +K+T
Sbjct: 228 IAEAQNMDDKSRLTSKLT 245
>gi|9631080|ref|NP_047750.1| Ld-bro-i [Lymantria dispar MNPV]
gi|3822348|gb|AAC70299.1| Ld-bro-i [Lymantria dispar MNPV]
Length = 346
Score = 83.5 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 74/207 (35%), Gaps = 23/207 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR------------------YPLK 58
+V D ++ K++A LGY + + H K P
Sbjct: 24 VVMPDGDVAVKLKELALFLGYADVKMS-YKHVPDEWKITWKNLQNKLASKRHQLVAPPTT 82
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+ + EP VY LL +S P A++ ++V+E +LPT+RKTG + +
Sbjct: 83 PANWHPETLFVLEPGVYALLARSNKPLAKERMKFVYETILPTIRKTGKFEMSKTSDVINY 142
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + + L E +K + + I + + + + L
Sbjct: 143 DARMAEMKVELLE----EKMKHQSTVACLAEKERAIVEIKLEHERQLAEFKEREYEMKLA 198
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQ 205
+ ++ E N +N LL K ++
Sbjct: 199 MQRLSEAANMTMTQFAVNALLAKDNIE 225
>gi|326203495|ref|ZP_08193359.1| BRO domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986315|gb|EGD47147.1| BRO domain protein [Clostridium papyrosolvens DSM 2782]
Length = 251
Score = 83.1 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 85/238 (35%), Gaps = 31/238 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYP--- 56
M I F S + D++ +WF + + AL Y AI N H + +
Sbjct: 1 MQLIKSESFGSVQCDVWKDENGEMWFTREQIGQALEYGTPRIAIANIHERNADRIDKFSA 60
Query: 57 ---LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
L T GIQ+ I S + + S P A F WV+ EV+ ++RK G Y+ +
Sbjct: 61 VVKLSTPSGIQETYIYSHKGLNEICRFSRQPKADAFMDWVW-EVIESIRKHGMYAKDELL 119
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
V+ K E K ++ L + L +D
Sbjct: 120 DNPDLMIEVITQLKKEREEKKLLQTENKLL--------------------SQEKLTWADR 159
Query: 174 DEYLTI-TQIGERLNPPQRARFLNK-LLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
I +IG + + K LL G+ ++ +R + G++ G + D+
Sbjct: 160 KVIEAIVKKIGSNIGYDVAWKEFKKELLYSHGICLNSRITNWRNST-GKKTGPRTLDM 216
>gi|20069954|ref|NP_613158.1| BRO-d [Mamestra configurata NPV-A]
gi|20043348|gb|AAM09183.1| BRO-d [Mamestra configurata NPV-A]
gi|33331786|gb|AAQ11094.1| BRO-D [Mamestra configurata NPV-A]
Length = 329
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ-- 64
F + ++ ++ D + +W +A A L Y ++ AI +R +
Sbjct: 8 FGNQKLEVVSVKDCNNQLWLLANPFARILQYVSAPNAIAKFVSNNNQRSFENIKSHHSDE 67
Query: 65 ----------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAP 112
K + I+ ++ L+ S +P AQ+F++WV ++L L TG Y +AP
Sbjct: 68 TYVTSSYVQAKSKFINRAGLFELIQASKMPKAQEFKQWVNSDLLGKLSDTGEYRMQTDAP 127
Query: 113 KLRATSASTVLRVH---------KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
+ + + + ++ + L E KDN++ ++ +T+ G +
Sbjct: 128 TSASEAMNVIHKICNNGQEASWREELNEFKHIIKTKDNKIN-ELTLSLTETNGALLSLSQ 186
Query: 164 DIKHLPSSDNDEYLTITQIGERL 186
++ + N+ ++Q+ R+
Sbjct: 187 NLSSALNMVNEARQDMSQLANRM 209
>gi|309806796|ref|ZP_07700785.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
03V1-b]
gi|308166770|gb|EFO68960.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
03V1-b]
Length = 129
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK-TEG 61
+ F F++N++RT + D +F +DV L +N A+ + T
Sbjct: 6 EVKIFHFQNNEVRTKL-IDNEPYFNLEDVCKILEIKNPRRAMERLLDKQGIYDVMTFTLT 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G + IS+P++ +L+ S +F W+ EVL
Sbjct: 65 GYTETNFISKPNLNKLISHSHRREKTEFAVWLASEVL 101
>gi|325911587|ref|ZP_08173995.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 143-D]
gi|325476573|gb|EGC79731.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 143-D]
Length = 70
Score = 82.7 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP + G Y +
Sbjct: 1 MDTLTQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAIVHKGVYMTDKKAY 60
Query: 115 RATSAST 121
T +
Sbjct: 61 DITHDRS 67
>gi|330833782|ref|YP_004402607.1| prophage antirepressor [Streptococcus suis ST3]
gi|329308005|gb|AEB82421.1| prophage antirepressor [Streptococcus suis ST3]
Length = 248
Score = 82.3 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR 67
+F + +KD N F+A +VA + +N+ + + + Y + G ++V
Sbjct: 95 QFGNKSFEIYGNKD-NPLFIAVEVAEMIEVQNTTDLLKRIDEDEKLTYVISRAGQKREVN 153
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS-----VEAPKLRATSASTV 122
+++E +Y +L +S P A++F++ V + +L +R G Y + P A ++
Sbjct: 154 MLTEFGLYEVLFQSRKPKAKEFKK-VVKNILKEIRVNGYYMQGELIQDQPTQSAIELNSD 212
Query: 123 LRVHK-HLEELAKQAGLKDNQLLLKVNRGVTKI 154
+ K L EL + D ++ L + ++
Sbjct: 213 MAYIKNRLAELQSMTTMADIKIGLAKTYRIAEL 245
>gi|153954472|ref|YP_001395237.1| prophage antirepressor-related protein [Clostridium kluyveri DSM
555]
gi|146347353|gb|EDK33889.1| Prophage antirepressor-related protein [Clostridium kluyveri DSM
555]
Length = 294
Score = 82.3 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 96/258 (37%), Gaps = 50/258 (19%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN--------------- 45
M+ + EF +KI T V D+ W +A ++ + GY I+
Sbjct: 1 MNNLIVKEFNGDKIHTFVWNDKPCW-IANEIVSMFGYVEPKVTISQCIEAEQFEIGIEYE 59
Query: 46 -------AHCKGVAKRYPLKTEGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
K + K +E + + I E +Y L + P +F +W+
Sbjct: 60 ILKYNELKDFKELVKNTLTTSELINKYASSLAIFYEDGLYGFLQYTDKPIGVQFRKWIRR 119
Query: 96 EVLPTLRKTGSYSVEAPKLRAT----SASTVLRVHKHLEELAKQAGLK--DNQLLLKVNR 149
EVLP +R+TG+Y + A + ++K +E ++ + DN + L V +
Sbjct: 120 EVLPEIRQTGAYISDKASTEALKESNQPEKLETINKSVELVSPLLDVAGVDNTIKLLVVK 179
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRA-----RFLNKLLLKRGL 204
+ GVD + +++ QI + + + + +++ K +
Sbjct: 180 TLFSKAGVDIP-------IEIEAREKFYDTKQIAKMVGMYSKTGNPAFGAVGQIIKKLDI 232
Query: 205 Q------VSKVSGGYRPT 216
+ V + SG ++ T
Sbjct: 233 EEHEKEVVWESSGSWQGT 250
>gi|182676847|ref|YP_001830994.1| prophage antirepressor [Beijerinckia indica subsp. indica ATCC
9039]
gi|182636477|gb|ACB97250.1| prophage antirepressor [Beijerinckia indica subsp. indica ATCC
9039]
Length = 120
Score = 82.3 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
F F+ IRT + K+ WF+A D AL + EA + T GG Q
Sbjct: 18 QDFYFKDALIRTFL-KNSEPWFIASDACAALSHTKPTEATEKLYEIEKDVATYHTPGGPQ 76
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFE 90
+ISE +Y+L++ + A+ F
Sbjct: 77 AGLVISESGLYKLIMTARTEGAKIFR 102
>gi|227485773|ref|ZP_03916089.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
gi|227236244|gb|EEI86259.1| phage antirepressor protein [Anaerococcus lactolyticus ATCC 51172]
Length = 169
Score = 82.3 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 22/150 (14%)
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELA 133
+Y L++ S LP A+ F+ WV EVLP++RK G Y K K EEL
Sbjct: 1 MYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAGQEK-------------KTNEELL 47
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRAR 193
A L N+++ + + L + D + + L PQ
Sbjct: 48 ADAILVANRIIAEREEE------NEVLRPKADYYDKLVDYNLLTNFRNTAKELGIPQ--N 99
Query: 194 FLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ L+ +GL P + +G
Sbjct: 100 QFIRFLMDKGLIYRDKKKKLLPY-ADKNKG 128
>gi|319746125|gb|EFV98398.1| phage antirepressor protein [Streptococcus agalactiae ATCC 13813]
Length = 206
Score = 82.3 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKV 66
+ IR + + W V D+ AL + V + + G Q++
Sbjct: 5 TWNGYDIRFV-EHQGEWWAVLADICHALDLK-PKRVKERLVDEVVSTDHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSASTVL 123
I++E +Y + S P A+ F+ WVF E + LR+ TG + ++ + +
Sbjct: 63 LIVNEFGIYDTIFSSRKPEAKSFKFWVF-ETIKQLRQSTGLEGFQVFRMFDKEHQKQAMN 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ L+ K+ +K N + VN+ V+ + G ++
Sbjct: 122 RLVDGLQNATKKDLIKANTI---VNKAVSDLYGYPKM 155
>gi|163803150|ref|ZP_02197033.1| Prophage antirepressor [Vibrio sp. AND4]
gi|159173050|gb|EDP57883.1| Prophage antirepressor [Vibrio sp. AND4]
Length = 269
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 22/166 (13%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----------------AHCKGVAK 53
+I+T+ K+ F+ DV ++ I+ +
Sbjct: 12 GELEIKTLQ-KNGETLFLLPDVIRV--ISKESQHIDGKSTSDQTSFLRACLSSLEDDERF 68
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY---SVE 110
+ G + +SEP VYR+ ++S A+KF+ WV +EV+P++RK G Y V
Sbjct: 69 MESIIENGIERTDYFVSEPGVYRVALQSNSSGAKKFQNWVIKEVMPSIRKYGIYPPPEVS 128
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
L A + + L + + + K +L KV I G
Sbjct: 129 DDDLILQLADQQAKQSQLLSQFIRNSKEKFEKLDEKVGEQSNTIKG 174
>gi|9630956|ref|NP_047553.1| BRO-e [Bombyx mori NPV]
gi|3745975|gb|AAC63822.1| BRO-e [Bombyx mori NPV]
Length = 241
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK--- 53
M+ + F+F ++ +R ++ +Q + FVA+D+A L ++N+ +AI H G K
Sbjct: 1 MAQVKIGKFKFGEDTFTLRYVLGGEQPVRFVARDIANKLKFKNTKKAIRDHVDGKYKCTF 60
Query: 54 --------RYPLKTEGGI----QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ +G + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 61 EQACINISKEKHVKQGNPLYLQTQTILLDKIGVIQLFMRSKMTNAAELQNWFYEHVLPQ 119
>gi|76788378|ref|YP_330680.1| prophage Sa05 BRO domain-containing protein [Streptococcus
agalactiae A909]
gi|77410858|ref|ZP_00787215.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
CJB111]
gi|76563435|gb|ABA46019.1| prophage Sa05, BRO domain protein [Streptococcus agalactiae A909]
gi|77163076|gb|EAO74030.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
CJB111]
Length = 200
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKV 66
+ IR + + W V D+ AL + V + + G Q++
Sbjct: 5 TWNGYDIRFV-EHQGEWWAVLADICHALDLK-PKRVKERLVDEVVSTDHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSASTVL 123
I++E +Y + S P A+ F+ WVF E + LR+ TG E ++ + +
Sbjct: 63 LIVNEFGIYDTIFSSRKPEAKSFKFWVF-ETIKQLRQATGLEGFEVFRMLDKEHQKEAMA 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ L+ ++K+ +K N + N+ V+ G ++
Sbjct: 122 RLTNSLDRVSKKDLIKANTI---TNKAVSNKFGYSKM 155
>gi|254695067|ref|ZP_05156895.1| BRO family protein [Brucella abortus bv. 3 str. Tulya]
gi|261215419|ref|ZP_05929700.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|260917026|gb|EEX83887.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
Length = 106
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGY----------ENSNEAINAHCKGVAKRYPLKTE 60
+++R ++ + + WFVA DV + LG ++ +N K + +R
Sbjct: 2 DHRVRVVL-LNGDPWFVAADVVSLLGLATYADGSPNVTHATRVLNTTEKLLLRRTTPHLM 60
Query: 61 GGIQKVRI---------ISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
G + +SE +Y+L+++ P A+KF+ WV + V
Sbjct: 61 SGSVEKLFAFRQPSLLSVSESGLYKLIMRFRKPEAKKFQNWVTQVV 106
>gi|71275565|ref|ZP_00651850.1| similar to Prophage antirepressor [Xylella fastidiosa Dixon]
gi|71900790|ref|ZP_00682910.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71163456|gb|EAO13173.1| similar to Prophage antirepressor [Xylella fastidiosa Dixon]
gi|71729467|gb|EAO31578.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 202
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPL---------KTEGGIQ 64
I+D+D A D+A ALGY + + N H + + L + +
Sbjct: 17 IIDRDGVPHLTAADLARALGYADERSVSRIYNRHSEEFTYQMTLVVNLTVKGFGSGNSDK 76
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTV 122
VR+ S + + + + A F RWV + E +P++RKTG YS P +
Sbjct: 77 PVRLFSPRGCHMVAMFARTSVAAAFRRWVLDVLEFMPSIRKTGGYSASHPPAVTLTEVEA 136
Query: 123 LRVHKHLEELA 133
R++ L +A
Sbjct: 137 FRLYALLRMVA 147
>gi|126417602|gb|ABO13903.1| BRO-b [Bombyx mori NPV]
Length = 239
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-- 54
M+ + F+F + +R ++ +Q + FVAKD+A +L Y + +A+ H G K
Sbjct: 1 MAQVKIGQFKFGQDEFTLRYVLGDEQPVKFVAKDIAISLKYASYEKAVRVHVDGKYKYTF 60
Query: 55 ----YPLKTEGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ E ++ + ++ + V +LL++S + +A + + W +E VLP
Sbjct: 61 EQACINISKENRVKQGDPLYLSPQTILLDKIGVIQLLMRSKMHNAAELQNWFYEYVLPQ 119
>gi|77406882|ref|ZP_00783908.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
H36B]
gi|77174514|gb|EAO77357.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
H36B]
Length = 206
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL-KTEGGIQKV 66
+ IR + + W V D+ AL + V + + G Q++
Sbjct: 5 TWNGYDIRFV-EHQGEWWAVLADICHALDLK-PKRVKERLVDEVVSTDHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSASTVL 123
I++E +Y + S P A+ F+ WVF E + LR+ TG + ++ + +
Sbjct: 63 LIVNEFGIYDTIFSSRKPEAKSFKFWVF-ETIKQLRQSTGLEGFQVFRMFDKEHQKQAMN 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ L+ K+ +K N + N+ V+ + G ++
Sbjct: 122 RLVDGLQNATKKDLIKANTI---ANKAVSDLYGYPKM 155
>gi|13751084|emb|CAC37061.1| Bro-I protein [Bombyx mori NPV]
Length = 241
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 1 MSTITP--FEF--ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-- 54
M+ + F+F ++ +R ++D +Q + FVAKD+A++L Y N +A+ + K
Sbjct: 1 MAQVKIGEFKFGEDTFTLRYVLDAEQQVKFVAKDIASSLKYVNCKQAVIVNVDNKYKTTY 60
Query: 55 ----YPLKTEGGIQ---------KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ E ++ + ++ + V +L ++S + +A + + W +E VLP
Sbjct: 61 EQACINISKENRVKQGDPLYLQSQTILLDKIGVIQLFMRSKMTNAAELQNWFYEHVLPQ 119
>gi|237727004|ref|ZP_04557485.1| LOW QUALITY PROTEIN: antirepressor [Bacteroides sp. D4]
gi|229433860|gb|EEO43937.1| LOW QUALITY PROTEIN: antirepressor [Bacteroides dorei 5_1_36/D4]
Length = 201
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
T GIQK++ I+E +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y + R T
Sbjct: 4 PTTSGIQKMKYINEGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI---TDRGT 60
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
+ R ++ + ++L +++ + K+
Sbjct: 61 LPEFIKRYKDNIHMIPSNYFFVISELYVRLYAELEKVGYA 100
>gi|269123668|ref|YP_003306245.1| prophage antirepressor [Streptobacillus moniliformis DSM 12112]
gi|268314994|gb|ACZ01368.1| prophage antirepressor [Streptobacillus moniliformis DSM 12112]
Length = 226
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 27/200 (13%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE-GGIQKVRIISEPDVYRLLVKST 82
F A ++A + N ++ I + + + E G K ++E +Y +L S
Sbjct: 23 PRFNANEIARIIENSNVSQMIKEVDEDEKELVLVTREDGRTHKQWYLTEDGLYEVLFASR 82
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
P A+KF++ V +E+L ++R+ G Y V K A+ R+ ++E K+ + +N
Sbjct: 83 KPIAKKFKKQV-KEILKSIRQKGGYIV--VKKEDNEATIKSRIENLMKETEKKLRILEN- 138
Query: 143 LLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
KI G + + + EY+ I+ I ++ + L K+L ++
Sbjct: 139 ----------KINGYE---------IFFDEGKEYIGISFIAQKYE--MKVDELIKILTEK 177
Query: 203 GLQVSKVSGGYRPTPKGEER 222
K K +
Sbjct: 178 RFLYKK-GKVLYLYRKHRYK 196
>gi|295108732|emb|CBL22685.1| Prophage antirepressor [Ruminococcus obeum A2-162]
Length = 78
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 3 TITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ F+ E +R+ + + +FV KDV LGY + N++I H K
Sbjct: 2 ELQIFKNAELGSVRSAM-INGEPYFVGKDVTEILGYADPNKSIAMHVDEDDKFNDKSASS 60
Query: 62 -GIQKVRIISEPDVYRLL 78
G I+E +Y L+
Sbjct: 61 LGQSGGWFINESGLYSLI 78
>gi|260546549|ref|ZP_05822289.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus NCTC 8038]
gi|260756145|ref|ZP_05868493.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 6
str. 870]
gi|260759369|ref|ZP_05871717.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 4
str. 292]
gi|260761090|ref|ZP_05873433.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260885164|ref|ZP_05896778.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 9
str. C68]
gi|260096656|gb|EEW80532.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
abortus NCTC 8038]
gi|260669687|gb|EEX56627.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 4
str. 292]
gi|260671522|gb|EEX58343.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260676253|gb|EEX63074.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 6
str. 870]
gi|260874692|gb|EEX81761.1| LOW QUALITY PROTEIN: BRO family protein [Brucella abortus bv. 9
str. C68]
Length = 96
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y K+ A
Sbjct: 34 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEEKVSAGEMD 85
>gi|209363560|ref|YP_002267978.1| anti-repressor [Staphylococcus phage phi2958PVL]
gi|257428265|ref|ZP_05604663.1| anti-repressor [Staphylococcus aureus subsp. aureus 65-1322]
gi|208973061|dbj|BAG74377.1| anti-repressor [Staphylococcus phage phi2958PVL]
gi|257275106|gb|EEV06593.1| anti-repressor [Staphylococcus aureus subsp. aureus 65-1322]
Length = 54
Score = 80.8 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH 47
M + F FE +RT+ D +FV KDVA LGY N+ +A++ H
Sbjct: 1 MQALQTFNFEELPVRTLTV-DNEPYFVGKDVAEILGYSNTRDALSKH 46
>gi|164519249|ref|YP_001649036.1| BRO-A [Helicoverpa armigera granulovirus]
gi|163869435|gb|ABY47745.1| BRO-A [Helicoverpa armigera granulovirus]
Length = 516
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 40/223 (17%)
Query: 29 KDVATALGYENSNEAINAHCKGVAK------------RYPLKTEGGIQ---------KVR 67
K++A LGY + +A K R+P Q +
Sbjct: 61 KELAAFLGYGDVKKA-YKLIPEEWKITWTNLQTKLGPRWPQLVTSSNQTQLPANWHPETL 119
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+ EP VY L+ +S P A++ ++V+E +LPT+RKTG Y V+ + ++++ V+ K
Sbjct: 120 FVLEPGVYALMARSNKPVAKQRMKFVYETILPTIRKTGKYEVKTLQ---STSTEVVNYDK 176
Query: 128 HLEEL---AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGE 184
L E A + L+ +Q + K + + + + + +H + + + +
Sbjct: 177 KLAEAHMEAMKLKLELSQTVAKYDSQLNEYRLANVEMKRNYEHQMAEFKEREYKMQLQMK 236
Query: 185 RL----NPPQRARFLNKLLLKRGL----QVS----KVSGGYRP 215
L N +N LL K + Q+ VSG P
Sbjct: 237 DLVNAANMTMTQFAVNALLAKDNIEENSQMRQTLTNVSGRVVP 279
>gi|282934412|ref|ZP_06339676.1| toxin-antitoxin system, toxin component, Bro family
[Lactobacillus jensenii 208-1]
gi|281301533|gb|EFA93813.1| toxin-antitoxin system, toxin component, Bro family
[Lactobacillus jensenii 208-1]
Length = 97
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ + F F IRT+ D +FV KDVA LGY +A+ H K L T
Sbjct: 1 MTDLQIFNFNGADIRTLT-IDGEPYFVGKDVAEILGYAIPTKAVTDHVDKEDRKTEILNT 59
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFER 91
Q + E + ++ + +QKF+
Sbjct: 60 TELFQNGNNVKESQAPQ--NRTNVKKSQKFQN 89
>gi|9964489|ref|NP_064957.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944698|gb|AAG02881.1|AF250284_175 AMV175 [Amsacta moorei entomopoxvirus 'L']
Length = 346
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 87/243 (35%), Gaps = 20/243 (8%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN--SNEAINAHCKGVAKRY-------- 55
F + KI+ I + N WF K++ AL Y + N+ +N
Sbjct: 33 IFNYNDVKIKVIGTIN-NPWFCGKNILKALEYSDDSHNKILNRLDDKFKDNMYNILSSVR 91
Query: 56 --PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAP 112
T+ K ++EP +Y +++ T SA+ F+ ++ ++LPT+RK T ++
Sbjct: 92 DNLSMTKNNKNKAIYLNEPGIYYIILHCTKDSAKGFQDFILFDLLPTIRKRTQKKYIDII 151
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM-DIKHLPSS 171
+ + ++ + + ++ L K+ G++ +E +IK +
Sbjct: 152 NNKQDKIDILSIKLDNISKQNNELLTQNQLALNKLQEL-----GINLIETKEEIKDVKDK 206
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
N + + + L ++ + + Y T K +
Sbjct: 207 LNVVIEDRNVKPKEVKLQHKYLLLKNKIINNEYKFIRAQDQYIKTNKSNWLEKHNVIIDE 266
Query: 232 QHV 234
++
Sbjct: 267 KYN 269
>gi|209901312|ref|YP_002290951.1| hypothetical protein phiCD27_gp75 [Clostridium phage phiCD27]
gi|199612193|gb|ACH91366.1| hypothetical protein [Clostridium phage phiCD27]
Length = 225
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 29/217 (13%)
Query: 11 SNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK---- 65
++ + K+ +WF A DV LG N + + + K++ T G
Sbjct: 7 EKNVKVMWSKNGEEVWFNANDVGEELGIVNIRDTLRNIDREYKKKFNESTVGDSYTRNFK 66
Query: 66 -------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
++E VY + +S P A+ F +WV + L +R G Y + E +
Sbjct: 67 DKLPNFGTTFVTEEAVYNMSFRSNKPEAKLFTKWVTKT-LKQIRIHGYYIATEKDQEWLD 125
Query: 118 SASTVLRVHKHLEEL--------------AKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
+ +V K + Q K L++ G+ K D+L
Sbjct: 126 IRTEGKKVRKDFTDEIQEFVYYATSQGSNKPQMYYKHFTELVRKKLGIPKGVKRDELNQS 185
Query: 164 DIKHLPSSDN-DEYLTITQIGERLNPPQRARFLNKLL 199
++ + + + I + +N + + + +L+
Sbjct: 186 ELFDIQALERIISMKLPKLIDKDMNYKEVYKKIKELI 222
>gi|114680000|ref|YP_758450.1| bro-i [Leucania separata nuclear polyhedrosis virus]
gi|39598731|gb|AAR28917.1| bro-i [Leucania separata nuclear polyhedrosis virus]
Length = 263
Score = 79.6 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAINAHCKG------VA 52
MS +T +F +NK++ + D +W +A A L Y N+ AI+
Sbjct: 28 MS-VTTVQFANNKLKVVSIIDTTGQLWMLANPFARILEYSNAPNAISRFVSKNNWQCLKK 86
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ + R I++ + L++KS + A +F W+ E+ P+L
Sbjct: 87 IKCQITNYSLHPSSRFINKAGLLELVLKSRMRYAAEFRFWLVNELFPSL 135
>gi|113195449|ref|YP_717586.1| BRO-A [Clanis bilineata nucleopolyhedrosis virus]
gi|94958990|gb|ABF47391.1| BRO-A [Clanis bilineata nucleopolyhedrosis virus]
Length = 449
Score = 79.6 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ + + EP VY L+ +S P A++ ++V+E +LPT+RKTG Y
Sbjct: 13 RDHLMTSSELPTNWQPETLFVLEPGVYALMARSNKPVAKQRMKFVYETILPTIRKTGKYD 72
Query: 109 VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
V A+S+S V+ K L + A ++ QL L++ + + +
Sbjct: 73 VSK---TASSSSEVVNYDKQLAD----AQIESLQLKLELTNVKYNTEVLQRNYEKQMAEF 125
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKV 209
+ LT+ + + N +N LL K ++ +K
Sbjct: 126 KEREYRMQLTMKDMAMQNNVSMTQFAVNALLAKDNIEENKE 166
>gi|254975173|ref|ZP_05271645.1| prophage antirepressor-related protein [Clostridium difficile
QCD-66c26]
gi|255092563|ref|ZP_05322041.1| prophage antirepressor-related protein [Clostridium difficile CIP
107932]
gi|255314300|ref|ZP_05355883.1| prophage antirepressor-related protein [Clostridium difficile
QCD-76w55]
gi|255516980|ref|ZP_05384656.1| prophage antirepressor-related protein [Clostridium difficile
QCD-97b34]
gi|255650082|ref|ZP_05396984.1| prophage antirepressor-related protein [Clostridium difficile
QCD-37x79]
gi|260683214|ref|YP_003214499.1| prophage antirepressor-related protein [Clostridium difficile
CD196]
gi|260686810|ref|YP_003217943.1| prophage antirepressor-related protein [Clostridium difficile
R20291]
gi|306519615|ref|ZP_07405962.1| prophage antirepressor-related protein [Clostridium difficile
QCD-32g58]
gi|260209377|emb|CBA62823.1| prophage antirepressor-related protein [Clostridium difficile
CD196]
gi|260212826|emb|CBE04009.1| prophage antirepressor-related protein [Clostridium difficile
R20291]
Length = 288
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/250 (19%), Positives = 95/250 (38%), Gaps = 45/250 (18%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
M + EF ++I T + K+++ W +A + Y + ++ I K +
Sbjct: 1 MKNLIVKEFNGSQIYTFMWKEKSCW-IANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYD 59
Query: 60 ----------------------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ + I E +Y L + P +F +W+ EV
Sbjct: 60 VLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREV 119
Query: 98 LPTLRKTGSYSVE--APKLRATSASTVLRVH------KHLEELAKQAGLKDNQLLLKVNR 149
LP++R+TG+Y P+ AS + ++ L+EL AG DN+ L +
Sbjct: 120 LPSIRQTGAYITNNANPEKLREKASEIEKLQLAYNSTSMLKELLDGAGF-DNKSKLLTAK 178
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKL-----LLKRGL 204
+ K G+D + ++ + Y QI +L ++ +L + K L
Sbjct: 179 TLYKKAGIDLP-------IEINEEEHYFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIDL 231
Query: 205 QVSKVSGGYR 214
+ ++V G +
Sbjct: 232 EENEVKGVWE 241
>gi|71901482|ref|ZP_00683569.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
gi|71728738|gb|EAO30882.1| similar to Prophage antirepressor [Xylella fastidiosa Ann-1]
Length = 214
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYPLKTE---------GGIQ 64
I+D+D A D+A ALGY++++ + H L + +
Sbjct: 17 IIDRDGVPHLTAADLARALGYKDTSAVLRIYSRHTDEFTSEMSLTVKLTVKGFGCGNSEK 76
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTV 122
VR+ S + + + + A F RWV + E +P++RKTGSY+ T
Sbjct: 77 PVRLFSPRGCHMVAMFARTSVAAAFRRWVLDVLEFMPSIRKTGSYTSNNAVSLTTVRRCG 136
Query: 123 LRVHKHLE 130
K L+
Sbjct: 137 TVASKELQ 144
>gi|237814748|ref|ZP_04593746.1| BRO family protein [Brucella abortus str. 2308 A]
gi|254690577|ref|ZP_05153831.1| BRO family protein [Brucella abortus bv. 6 str. 870]
gi|254696702|ref|ZP_05158530.1| BRO family protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254731610|ref|ZP_05190188.1| BRO family protein [Brucella abortus bv. 4 str. 292]
gi|256258832|ref|ZP_05464368.1| BRO family protein [Brucella abortus bv. 9 str. C68]
gi|237789585|gb|EEP63795.1| BRO family protein [Brucella abortus str. 2308 A]
Length = 81
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y K+ A
Sbjct: 19 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEEKVSAGEMD 70
>gi|307822262|ref|ZP_07652494.1| prophage antirepressor [Methylobacter tundripaludum SV96]
gi|307736828|gb|EFO07673.1| prophage antirepressor [Methylobacter tundripaludum SV96]
Length = 129
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
L T G Q I+E +Y L+ +S P A+ F WV E VLP +RKTG + K R
Sbjct: 4 NLITIKGEQDAYFINEAGLYHLIFRSNKPKAKDFANWVCETVLPEIRKTGFFGTIGIKNR 63
Query: 116 ATSASTV 122
++ + +
Sbjct: 64 SSISRQI 70
>gi|28211228|ref|NP_782172.1| hypothetical protein CTC01560 [Clostridium tetani E88]
gi|28203668|gb|AAO36109.1| phage-related protein [Clostridium tetani E88]
Length = 254
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 17/191 (8%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGY--ENSNEAINAHCKGVAK--RYPLKTEGGI 63
EFE K+ I++++ + F ALGY +N+ I + K + T
Sbjct: 11 EFEGQKVEIIIEEN--VLFELYSTGMALGYIKKNNIGKIYPQKDRIDKIIKNAEITPCVH 68
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS--- 120
++E +Y +++S +KF +WV EVLP +R+ G Y + + +
Sbjct: 69 GVHTYLTEDMLYDFMLESRTEKCKKFRKWVTNEVLPQIRQNGMYISDNATIEQKEYNYNM 128
Query: 121 --------TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
++ ++ +E + ++L K N K ++
Sbjct: 129 LDITFKNCSIEQLEDKYKECMEFHKENKTRILYKANTKKRKDATHTHSDSKIKIMEKIIK 188
Query: 173 NDEYLTITQIG 183
E T IG
Sbjct: 189 TLEDRNKTLIG 199
>gi|9635380|ref|NP_059278.1| ORF130 [Xestia c-nigrum granulovirus]
gi|6175774|gb|AAF05244.1|AF162221_130 ORF130 [Xestia c-nigrum granulovirus]
Length = 237
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 28 AKDVATALGYENSNEAINAHCKGVAKRYP------------LKTEGGIQKVRIISEPDVY 75
VA +LGY+ A+ H K ++ L I+E VY
Sbjct: 8 GHGVAESLGYKCPRRALYDHVKPQWRKTWAEIKKLTFFNEALLPSNWQPNTVFITEAGVY 67
Query: 76 RLLVKSTLPSAQKFERWVFEEVLPTLRK 103
L+ KS L A+ F W+F+ ++P +R+
Sbjct: 68 ALINKSKLAGAEIFREWLFDTIIPQMRR 95
>gi|309805001|ref|ZP_07699058.1| BRO family, N-terminal domain protein [Lactobacillus iners
LactinV 09V1-c]
gi|308165660|gb|EFO67886.1| BRO family, N-terminal domain protein [Lactobacillus iners
LactinV 09V1-c]
Length = 116
Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 35/77 (45%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
+ +F +DV L +++ A + T G QK ISE ++YRL+ KS
Sbjct: 7 DPYFNLEDVCEILKIKDTKRAKARLDEQGVCDAMTLTSSGFQKKDFISETNLYRLIFKSR 66
Query: 83 LPSAQKFERWVFEEVLP 99
KF WV EVLP
Sbjct: 67 RLENIKFAVWVMSEVLP 83
>gi|223933699|ref|ZP_03625675.1| prophage antirepressor [Streptococcus suis 89/1591]
gi|223897652|gb|EEF64037.1| prophage antirepressor [Streptococcus suis 89/1591]
Length = 236
Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR 67
+F + +KD N F+A +VA + +N+ + + + Y + G ++V
Sbjct: 95 QFGNKSFEIYGNKD-NPLFIAVEVAEMIEVQNTTDLLKRVDEDEKLTYVISRAGQKREVN 153
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS-----VEAPKLRATSA-ST 121
+++E +Y +L +S P A++F++ V + +L +R G Y + P + A S
Sbjct: 154 MLTEFGLYEVLFQSRKPKAKEFKK-VVKNILKEIRVNGYYMQGELIQDQPTTQPLPAISD 212
Query: 122 VLRVHKHLEELAKQAGLKDNQL 143
+ + L E+ + L D
Sbjct: 213 LTYIKNKLAEVQEMDNLADITA 234
>gi|254975148|ref|ZP_05271620.1| hypothetical protein CdifQC_07530 [Clostridium difficile QCD-66c26]
gi|255092538|ref|ZP_05322016.1| hypothetical protein CdifC_07737 [Clostridium difficile CIP 107932]
gi|255314275|ref|ZP_05355858.1| hypothetical protein CdifQCD-7_07990 [Clostridium difficile
QCD-76w55]
gi|255516955|ref|ZP_05384631.1| hypothetical protein CdifQCD-_07564 [Clostridium difficile
QCD-97b34]
gi|255650057|ref|ZP_05396959.1| hypothetical protein CdifQCD_07709 [Clostridium difficile
QCD-37x79]
gi|260683196|ref|YP_003214481.1| hypothetical protein CD196_1453 [Clostridium difficile CD196]
gi|260686792|ref|YP_003217925.1| hypothetical protein CDR20291_1428 [Clostridium difficile R20291]
gi|306519592|ref|ZP_07405939.1| bro family, n-terminal [Clostridium difficile QCD-32g58]
gi|260209359|emb|CBA62792.1| bro family, n-terminal [Clostridium difficile CD196]
gi|260212808|emb|CBE03978.1| bro family, n-terminal [Clostridium difficile R20291]
Length = 150
Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 11 SNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK---- 65
+R I K+ +WF A DV LG N + + + K++ T G
Sbjct: 7 EKNVRMIWSKNGEEVWFNANDVGEELGIVNIRDTLRNIDREYKKKFNESTVGDSYTRNFK 66
Query: 66 -------VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRAT 117
++E VY + +S A+ F +WV + L +R G Y + E +
Sbjct: 67 DKLPNFGTTFVTEEAVYNMSFRSNKAEAKLFTKWVTK-ALKQIRIHGYYIATEKDQEWLD 125
Query: 118 SASTVLRVHKHLEELAKQ 135
+ R K L+ K
Sbjct: 126 IRTEGKRSEKILQMKYKS 143
>gi|148750864|ref|YP_001285908.1| hypothetical protein [Lactobacillus phage LL-H]
gi|1395127|gb|AAB06221.1| hypothetical protein [Lactobacillus phage LL-H]
Length = 69
Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTE 60
+ I FEF+ N +RT+ + WFV KDVAT LGY + +A+ H + L T
Sbjct: 3 NEIMNFEFDGNNVRTMQ-INGEAWFVGKDVATVLGYARTADAVRKHVDEEDRGVSNLATP 61
Query: 61 GGIQ 64
G Q
Sbjct: 62 SGEQ 65
>gi|227497456|ref|ZP_03927688.1| conserved hypothetical protein [Actinomyces urogenitalis DSM
15434]
gi|226833081|gb|EEH65464.1| conserved hypothetical protein [Actinomyces urogenitalis DSM
15434]
Length = 69
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
+ +RTIVD +NI+ AKD ATALGY N+N+AI HCKGV KRYPL+T GG Q+
Sbjct: 12 DFGNLRTIVD-GENIYICAKDAATALGYANTNKAIKDHCKGVTKRYPLETPGGTQEFAF 69
>gi|328883814|emb|CCA57053.1| DNA-binding protein [Streptomyces venezuelae ATCC 10712]
Length = 273
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/218 (19%), Positives = 77/218 (35%), Gaps = 25/218 (11%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---------AHCKGVAKRYPLKTEG 61
+R + D WF DVA LGY S EA+ A + + G
Sbjct: 15 GAPLRRLTAPDGTHWFPVVDVAKRLGYAGSREALRTVALPVTCLASAREITGGEVPGRSG 74
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA------PKLR 115
R++S + +L+ P A F W EV+ +++ G Y +E L
Sbjct: 75 IRAATRMVSLQGLVQLVGACRRPEAGPFRAW-TAEVIAAVQRYGGYGLEPSPVHAGFVLP 133
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG--VDQLEAMDIKHLPSSDN 173
++R+ +E A A ++ ++ R + D LE + + +
Sbjct: 134 PELVDVLVRLQGQFDERA--AAYAEHTAYAELLRETRRSLSRVADSLERLAV-PRQRTGA 190
Query: 174 DEYLTITQIGERL----NPPQRARFLNKLLLKRGLQVS 207
LT ++ E + A L L++ G++
Sbjct: 191 AVALTPQELVESWAITGDVRMVASCLAPALVRGGVRYR 228
>gi|281357236|ref|ZP_06243725.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
gi|281316267|gb|EFB00292.1| prophage antirepressor [Victivallis vadensis ATCC BAA-548]
Length = 110
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
+ +R ++D D + F+ +DV LGY N N +N + LKT+GGIQ VR+
Sbjct: 10 YGDKAVRMVLDDDG-LRFIIRDVCDILGYNNPNRILNRLGNTRREYAKLKTDGGIQNVRL 68
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+++ +V +LL + + F W F+ + P
Sbjct: 69 VTDDEVCKLLCNARTRATPAFADWYFDTLSP 99
>gi|326408304|gb|ADZ65369.1| BRO family protein [Brucella melitensis M28]
gi|326538018|gb|ADZ86233.1| antirepressor protein ANT [Brucella melitensis M5-90]
Length = 65
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
+SE +Y+L+++S P A+KF+ WV + VLP +RK G Y K+ A
Sbjct: 3 VSESGLYKLIMRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEEKVSAGEMD 54
>gi|255102975|ref|ZP_05331952.1| prophage antirepressor-related protein [Clostridium difficile
QCD-63q42]
Length = 288
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 45/241 (18%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
M + EF ++I T + K+++ W +A + Y + ++ I K +
Sbjct: 1 MKNLIVKEFNGSQIYTFMWKEKSCW-IANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYD 59
Query: 60 ----------------------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ + I E +Y L + P +F +W+ EV
Sbjct: 60 VLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREV 119
Query: 98 LPTLRKTGSYSVEAPKLRA--------TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNR 149
LP +R+ G+Y +A S TV + + L AG+ D + L +
Sbjct: 120 LPAIRQHGAYITNNADPQALREKANEIESLDTVNKTIEILTPFLDNAGI-DEKAKLLTAK 178
Query: 150 GVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRAR-----FLNKLLLKRGL 204
+ K G++ L + + + QI +LN ++ + +++ K +
Sbjct: 179 TIYKKAGIELP-------LEIEEKEHFFDTVQIATKLNVYSKSNKPAFHAIGEIIKKLDI 231
Query: 205 Q 205
Q
Sbjct: 232 Q 232
>gi|251780272|ref|ZP_04823192.1| BRO domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084587|gb|EES50477.1| BRO domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 246
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR---YPLKTEGGIQKVRI 68
++RTI + D +I A+D A G+ A + K L ++K
Sbjct: 25 FRVRTIQNDDGSISINAEDTAIGFGWYQIKSA-KKYPKWERINSFITDLGFSPQVEKDDF 83
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
I E Y L +K+ +A F++W+ +V+P++RKTG Y + PK+ + +
Sbjct: 84 IPESLFYMLAMKANNKAAYDFQKWLAVDVIPSIRKTGLYQM--PKMSKELQAIFAIDERT 141
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
+E ++ L++N + + + G ++ A+
Sbjct: 142 VELDSRITKLENNTTIDYSQQEELRTLGTKKVVAI 176
>gi|116326713|ref|YP_803250.1| hypothetical protein TNAV2c_gp027 [Trichoplusia ni ascovirus 2c]
gi|102231721|gb|ABF70544.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 258
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--------------PLKTEGGI 63
++ + WF+A +L Y N AI H +R+
Sbjct: 18 IEHNGVDWFLANPFGESLKYVNLPNAIAKHVTKKNQRFLYQLMHPPPREEEDDSSPFTIK 77
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
R I++ ++ L+ S + AQ+F W +V+P L G Y++ RA +
Sbjct: 78 YNSRFINKAGIWELIQNSPMKEAQEFRDWQNSDVMPKLCDVGEYNMLRDAPRAII-DGMN 136
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
+H E K + + ++ I D + A ++ IG
Sbjct: 137 TMHSATNEGRKAPWYQQEGAIGDLHEITLCIRNKDDIIAKCLQENSEQRLALAAKDELIG 196
Query: 184 ERLNPPQRARFLNK 197
+ L R +N+
Sbjct: 197 KCLVEIASQRNVNE 210
>gi|20069903|ref|NP_613107.1| BRO-b [Mamestra configurata NPV-A]
gi|20043297|gb|AAM09132.1| BRO-b [Mamestra configurata NPV-A]
Length = 372
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/233 (15%), Positives = 74/233 (31%), Gaps = 54/233 (23%)
Query: 1 MSTITPFEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--- 55
M+ + +F + + + +D +W +A A L Y +N+A+ H +R+
Sbjct: 1 MAVVKV-QFGTQDLEVVSLRDEKGQLWMLANSFARILEYSKANKAVATHVSFQNQRFWEE 59
Query: 56 ----------------------------PLKTEGGIQKVR-------------------I 68
+ + + +R
Sbjct: 60 LKSYHFGTTSITSSLQHENIKSTQVGQTSMTSSSQHENIRSPRFEEIGMTSLSVQAKSKF 119
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
I+ ++ L+ S +P AQ+F W+ ++L L TG Y ++ A + +H
Sbjct: 120 INRAGLFELIQASKMPKAQEFRNWINSDLLVKLCDTGEYHMQTDA-PADITEGMNVIHSV 178
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
+ + +KD L ++ +I + E + N Q
Sbjct: 179 TNDGKEAPWIKDLSELKQIVALKDQIIAMKDEENKKLTVNLQEANQNLTVANQ 231
>gi|50915154|ref|YP_061126.1| Phage antirepressor protein [Streptococcus pyogenes MGAS10394]
gi|50904228|gb|AAT87943.1| Phage antirepressor protein [Streptococcus pyogenes MGAS10394]
Length = 210
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTE 60
+ + + IR + + + W V D+A AL N V + +
Sbjct: 7 NLLRTETWNGYTIRFV-EHNGEWWAVLADIAKALDL-NPKFIKQRLGDEVVSNNHVADSL 64
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RAT 117
G Q++ I++E +Y + S A+ F+ WVF E++ LR+ TG + ++ +
Sbjct: 65 GRQQEMLIVNEFGIYETIFSSRKKEAKTFKLWVF-EIIKQLRQSTGLEGFQVFRMFDKEH 123
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ R+ LE++ + +K N + N+ V+ G+ ++
Sbjct: 124 QKQAMNRLVNGLEQVKQTDLIKANTI---ANKAVSNKYGLPKM 163
>gi|309810109|ref|ZP_07703955.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 2503V10-D]
gi|329919659|ref|ZP_08276637.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 1401G]
gi|308169608|gb|EFO71655.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 2503V10-D]
gi|328937311|gb|EGG33735.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners SPIN 1401G]
Length = 65
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+ ISEP++Y+L+ +S P A+K WV EVLP + G Y + T + +
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKVADWVKSEVLPAIVHKGVYMTDKKAYDITHDRSGATL 60
Query: 126 HKHLE 130
L+
Sbjct: 61 ADLLQ 65
>gi|311977357|ref|YP_003986476.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
gi|81999811|sp|Q5UP77|YL002_MIMIV RecName: Full=Uncharacterized Bro-N domain-containing protein L2
gi|55416627|gb|AAV50277.1| Bro family N terminal domain containing protein [Acanthamoeba
polyphaga mimivirus]
gi|308204266|gb|ADO18067.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
Length = 246
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 6 PFEFES--NKIRTIVDKDQN--IWFVAKDVATALGYENSNEAINAHCKGVAK------RY 55
F+FE + +D +W +VA LGY + +AI+ H + + R
Sbjct: 99 IFQFEGKRFTSFFVDKRDGKWDVWIYGAEVARFLGYNDDKKAISIHVESCNRLIFEEIRN 158
Query: 56 PLKTEGGI------QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
E +K + I+ L+ S P A K ++W+ +EV+P L G YS+
Sbjct: 159 NFPIESNSIPKTLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWLDDEVIPALIMDGVYSM 218
Query: 110 EAPKLRAT 117
+ +L+
Sbjct: 219 QPKELKVK 226
>gi|9631039|ref|NP_047709.1| Ld-bro-d [Lymantria dispar MNPV]
gi|3822307|gb|AAC70258.1| Ld-bro-d [Lymantria dispar MNPV]
Length = 510
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 42/261 (16%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY-----------------PLKT 59
IV D ++ K++A L YE+ +A K P T
Sbjct: 24 IVMPDGSVAVKLKELAEFLNYEDVKKA-YKLVPDEWKITWNILQNKLEPSRPHLVAPSTT 82
Query: 60 EGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGS-----------Y 107
Q + + EP VY L+ +ST P A++ ++V+E +LPT+RKTG Y
Sbjct: 83 PANWQPETLFVLEPGVYALMARSTKPMAKEKMKYVYETILPTIRKTGRFETPKTSQVVNY 142
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMDI 165
E +++ + +LA+ K+ + + ++ V +LE
Sbjct: 143 DAEVAEMKIKLLEAQMERQAIAAKLAEAQHDKERTMAVYDAKLAQHEQLLLVQKLEHQQQ 202
Query: 166 KHLPSSDNDEY-LTITQIGERLNPPQRARFLNKLLLKRGL----QVSKVSGGYR-----P 215
+ L I Q+ N +N LL K + Q+ + P
Sbjct: 203 LAEYKEREHQMQLQIQQLTTAANMTMTQFAVNALLAKDNIEENQQMRNTLNEIKDRVVPP 262
Query: 216 TPKGEERGGKMCDVPMQHVEG 236
+ + + +G
Sbjct: 263 MTEHPRKMEYIAGYERTTADG 283
>gi|115334661|ref|YP_764507.1| phage associated-antirepressor [Geobacillus phage GBSV1]
gi|84688611|gb|ABC61307.1| phage associated-antirepressor [Geobacillus phage GBSV1]
Length = 186
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 23/162 (14%)
Query: 66 VRIISEPDVYRLLVK----STLPS----AQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
+++I E D+YRL++K S P A++FE+W+FE VLPT+R+TG Y T
Sbjct: 1 MKVIPEGDIYRLIIKAADQSKNPEIRQKAEEFEKWIFEVVLPTIRRTGGYVANEDMFINT 60
Query: 118 SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYL 177
K + + + N+ ++ K+ D L D +
Sbjct: 61 YLPFADEQTKMMFRGMLETVRRQNE---QIAAMKPKVEYFDAL----------VDRNLLT 107
Query: 178 TITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ L +R F+N LL+ G +P
Sbjct: 108 NFRDTAKELKIKERY-FIN-WLLENKFVYRDQKGKLKPYAAY 147
>gi|71908121|ref|YP_285708.1| BRO family protein [Dechloromonas aromatica RCB]
gi|71847742|gb|AAZ47238.1| BRO family protein [Dechloromonas aromatica RCB]
Length = 58
Score = 75.4 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ V +++E +Y+++++S AQKF+ WV +EVLP++RKTGS+
Sbjct: 6 QVSTVSLLAESGLYKMVLRSRTQQAQKFQDWVTKEVLPSIRKTGSFVT 53
>gi|189024240|ref|YP_001935008.1| BRO family, N-terminal [Brucella abortus S19]
gi|189019812|gb|ACD72534.1| BRO family, N-terminal [Brucella abortus S19]
Length = 115
Score = 75.4 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA---TSASTVL 123
I+SE +Y+L+++ST P A+KF+ WV VLP +RK G Y K+ A L
Sbjct: 14 VIVSEARLYKLIMRSTKPEAKKFQNWVTGTVLPAIRKDGLYVRGEEKVSAGEMDLEELTL 73
Query: 124 RVHKHLEELAKQ 135
L+E K+
Sbjct: 74 ITLTRLQEKMKR 85
>gi|218886740|ref|YP_002436061.1| prophage antirepressor [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757694|gb|ACL08593.1| prophage antirepressor [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 294
Score = 75.4 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKRYP 56
MST F+ S+++ ++D++ W V TALGY + AI H
Sbjct: 1 MSTSLVFQ--SHQL-DVIDQNGQPWVRGYQVGTALGYSAPDLAIRKIYDRHADEFTDSMT 57
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
L T GG Q+ RI S + L + + P A+ F WV +VL TL
Sbjct: 58 AMVTLPTPGGPQETRIFSLRGCHLLAMFARTPVAKAFRAWVL-DVLETL 105
>gi|18310092|ref|NP_562026.1| hypothetical protein CPE1110 [Clostridium perfringens str. 13]
gi|18144771|dbj|BAB80816.1| phage-related conserved hypothetical protein [Clostridium
perfringens str. 13]
Length = 365
Score = 75.0 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 27/193 (13%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK--TEGGIQKVRIISEPD 73
TI +N F+A+DVA +G+ + + I + + P K + Q ++E
Sbjct: 19 TIYGTGENPLFLARDVANIIGHSKARDMIADVDEDEKIKMPFKMASSRSTQSQWFLTEDG 78
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLR-------------------KTGSYSVEAPKL 114
+Y +L+ S P A++F + V +++L LR K G+Y + L
Sbjct: 79 LYEVLLTSRKPVAKQFRKEV-KKILKQLRQKGVVILENATKEAINFEEKFGTYRIRKTFL 137
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDND 174
+T+ + ++ L + +A +N +K+++ + K G++Q D L +S
Sbjct: 138 NSTNITEDYKLFTELSKQEWKAKRLNNDDRVKLSKLIVK--GLEQRLNRDKSKLRAS--- 192
Query: 175 EYLTITQIGERLN 187
E L + ++ +N
Sbjct: 193 EMLAMQELLTDIN 205
>gi|228961479|ref|ZP_04123090.1| hypothetical protein bthur0005_49220 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798193|gb|EEM45195.1| hypothetical protein bthur0005_49220 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 281
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 56/281 (19%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE-----NSNEAINAHCKGVAKRY---- 55
F +I + D+ I+ K V +G N + I V R
Sbjct: 20 QLVNFNGAEIMAVKANDEKIYVGVKWVCKGIGLSDDQTRNERKKIQGDL--VLNRGGSNL 77
Query: 56 PLKTEGGIQKVRII--------------------SEPDVYR-LL---VKSTLPSAQKFER 91
L T G+Q+V I ++P++ + L+ +K+ F
Sbjct: 78 TLPTNSGVQEVLCIELQYLPLWLAKISITPNMRLNQPELTQNLITYQLKAKDVLVDAF-- 135
Query: 92 WVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEE-LAKQAGLKDNQLLLKVNRG 150
++K + PK R S + V R + LA G+K+
Sbjct: 136 ---------IKKEA--KQKQPKPRKKSINLVFRQEMDMARTLASITGVKEGIAYAVAIER 184
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS 210
+ TG D ++ + +L TQIGER+ +++R +N LL +RGLQ KV+
Sbjct: 185 AEQKTGEDFSSYKNLLP-TVTHETGFLNPTQIGERIG--KKSRAVNTLLQERGLQ-EKVN 240
Query: 211 GGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
+R T +G++ G +M P S Q++W+ +++
Sbjct: 241 KEWRLTDEGKKFGEEM---PYTRNGHSGYQIRWSGSVVDVL 278
>gi|322410903|gb|EFY01811.1| Phage antirepressor protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 202
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVR 67
+ IR + + W V D+A AL + + V+ + + G Q++
Sbjct: 5 TWNGYTIRFV-EHQGEWWAVLADIAKALDLKPKFIKQRLGDEVVSNNHVADSLGRQQEML 63
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TG--SYSVEAPKLRATSASTVLR 124
I++E +Y + S A+ F+ WVF E + LR+ TG + V + + R
Sbjct: 64 IVNEFGIYETIFSSRKKEAKTFKLWVF-ETIKQLRQSTGLEGFQVFRMLDKEHQKQAMNR 122
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ LE++ + +K N + N+ V+ G+ ++
Sbjct: 123 LVNGLEQVKQTDLIKANTI---ANKAVSNKYGLPKM 155
>gi|295394273|ref|ZP_06804503.1| phage antirepressor protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294972857|gb|EFG48702.1| phage antirepressor protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 74
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 1 MSTITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP 56
M+ + F E IRTI + F +DVA ALGY++ A+ HCKGVA +P
Sbjct: 1 MTALQAFTNHEFGTIRTITS-GGQVLFCGRDVANALGYQDPANAVKLHCKGVANYHP 56
>gi|134287198|ref|YP_001110894.1| Bro4 [Heliothis virescens ascovirus 3e]
gi|133722106|gb|ABO37228.1| Bro4 [Heliothis virescens ascovirus 3e]
Length = 237
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY---- 55
M+ + F +I ++ D +W +A A L Y N+ +AI ++
Sbjct: 1 MAVVKVNFNDRELEIISVKDDAGKLWMLANPFARILEYSNAPKAITKFVSNKNQKCLEKL 60
Query: 56 --PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ + K + I++ + L++KS + A +F W+ E+ P+L
Sbjct: 61 NTKMTSSYVQAKSKFINKTGLLELVIKSKMRFAAEFRYWLVNELFPSL 108
>gi|212693450|ref|ZP_03301578.1| hypothetical protein BACDOR_02966 [Bacteroides dorei DSM 17855]
gi|212663963|gb|EEB24537.1| hypothetical protein BACDOR_02966 [Bacteroides dorei DSM 17855]
Length = 190
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
++ I+E +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y + R T + R
Sbjct: 1 MKYINEGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI---TDRGTLPEFIKRY 57
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
++ + ++L +++ + K+
Sbjct: 58 KDNIHMIPSNYFFVISELYVRLYAELEKVGYA 89
>gi|27365825|ref|NP_761353.1| prophage antirepressor [Vibrio vulnificus CMCP6]
gi|27361974|gb|AAO10880.1| Prophage antirepressor [Vibrio vulnificus CMCP6]
Length = 251
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 37/216 (17%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATAL--------GYENSNEA------INAHCKGVAKRY 55
+I+T+ K + F+ DV + G SN+A I +
Sbjct: 12 GELEIKTMQ-KGGDTLFLLPDVVQVISQETQSLDGRATSNQASLLKASITSLEDDERFIE 70
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
+ +G ++ ++EP VYR+ +++ A+KF+ WV +EV+P++R+ G Y P
Sbjct: 71 TVIVDGKEERHYYVTEPGVYRVAMQAKSSGAKKFQNWVLKEVMPSIRRFGIY----PPPE 126
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+L+V K +QLL + R + KHL + +++
Sbjct: 127 VNDDDFLLQVADQ--------QAKQSQLLSQFMRSSME----------KFKHLDNKVDEQ 168
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSG 211
TI G L + +L L+ VS
Sbjct: 169 SDTIKLQGSVLQSLKERLDTVELNNHSNLEYFDVSE 204
>gi|77409839|ref|ZP_00786478.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
COH1]
gi|77171554|gb|EAO74784.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
COH1]
Length = 206
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTEGGIQKV 66
+ IR + + W V D+A AL N V + + G Q++
Sbjct: 5 TWNGYTIRFV-EHQGEWWAVLADIAKALDL-NPKFIKQRLGDEVVSNNHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSASTVL 123
I+SE +Y + S A+ F+ WVF E + LR+ TG + ++ + +
Sbjct: 63 LIVSEFGIYETIFSSRKKEAKTFKLWVF-ETIKQLRQSTGLEGFQVFRMFDKEHQKQAMN 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ L+ K+ +K N + N+ V+ + G ++
Sbjct: 122 RLVDGLQNATKKDLIKANTI---ANKAVSDLYGYPKM 155
>gi|12597544|ref|NP_075128.1| bro [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|12483810|gb|AAG53802.1|AF271059_59 bro [Helicoverpa armigera nucleopolyhedrovirus G4]
Length = 244
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 19/113 (16%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRY--- 55
MS +T +F ++ T VD + W VA A AL Y +N+AI G K +
Sbjct: 1 MS-LTKIQFGDKEVETYTVDFNGEKWMVANPFAEALNYSRANKAILEKVSDGNQKTFDQI 59
Query: 56 -------------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + I+ V+ L++ S + A++F W+
Sbjct: 60 KPYRIVHDGTGESSVIPRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWLSS 112
>gi|15426319|ref|NP_203614.1| bro-a [Helicoverpa armigera NPV]
gi|15384395|gb|AAK96306.1|AF303045_48 bro-a [Helicoverpa armigera NPV]
Length = 244
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 19/113 (16%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHC-KGVAKRY--- 55
MS +T +F ++ T VD + W VA A AL Y +N+AI G K +
Sbjct: 1 MS-LTKIQFGDKEVETYTVDFNGEKWMVANPFAEALNYSRANKAILEKVSDGNQKTFDQI 59
Query: 56 -------------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + I+ V+ L++ S + A++F W+
Sbjct: 60 KPYRIVHDGTGESSVIPRNMKPNTKFINRAGVFELIMSSQMEYARQFRYWLSS 112
>gi|208429878|ref|YP_002265431.1| antirepressor [Clostridium phage 39-O]
gi|190683361|gb|ACE82005.1| antirepressor [Clostridium phage 39-O]
gi|327492222|gb|AEA86243.1| prophage antirepressor [Clostridium phage CP26F]
Length = 223
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 29/217 (13%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP-----------LK 58
E +R I + + IWF A+D+ L +N +A+ + ++ +
Sbjct: 6 EKYNVRIIQTE-EEIWFSAEDLGELLEIKNIRDAVRKIEEEDKMKFNNSNVEETYIRNFE 64
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA------- 111
++ + ++E VY++ +S AQ+F +WV +V+ +R+ G Y +E
Sbjct: 65 SKLPNRGTTFLTEQGVYQIAFRSNKIEAQQFTKWV-SKVVKEIRRNGYYILEEQEKQRWF 123
Query: 112 ---PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGV-----DQLEAM 163
+ + + +E +Q + + K G+ D+L
Sbjct: 124 ATRKETKEVRKQETDMIKTLVEYAREQGSEHPEKYYISYTNLANKTLGIKANERDKLNQS 183
Query: 164 DIKHLPSSDNDEYLTITQ-IGERLNPPQRARFLNKLL 199
D+ L S + + I Q I E L+ + + + +
Sbjct: 184 DLLKLRSFETLITIKIEQGIKEGLHYKEIYKKVKNFM 220
>gi|322411259|gb|EFY02167.1| Phage antirepressor protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 202
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTEGGIQKV 66
+ IR + + W V D+A AL N V + + G Q++
Sbjct: 5 TWNGYTIRFV-EHQGEWWAVLADIAKALDL-NPKFIKQRLGDEVVSNNHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TG--SYSVEAPKLRATSASTVL 123
I++E +Y + S A+ F+ WVF E + LR+ TG + V + +
Sbjct: 63 LIVNEFGIYETIFSSRKKEAKTFKLWVF-ETIKQLRQSTGLEGFQVFRMLDKEHQKQAMN 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ LE++ + +K N + N+ V+ G+ ++
Sbjct: 122 RLVNGLEQVKQTDLIKANTI---ANKAVSNKYGLPKM 155
>gi|302876389|ref|YP_003845022.1| prophage antirepressor [Clostridium cellulovorans 743B]
gi|302579246|gb|ADL53258.1| prophage antirepressor [Clostridium cellulovorans 743B]
Length = 347
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 22 QNIWFVAKDVATALGY--ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
QN F+AKD+A + Y + N+ +N R + T+GG Q++ ++E VY +L+
Sbjct: 201 QNPLFLAKDIAEWIEYDLSSINKMLNNVDVEEKVRKIVPTQGGQQEMWFLTEDGVYEVLM 260
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLK 139
+S P A++F++ + + +L +R G Y K S+ K E+ K+ K
Sbjct: 261 QSRKPIAKEFKKQI-KIILKNIRLKGGYVANENKFVNNYFSSFSPQLK--SEMIKELESK 317
Query: 140 DNQLLLK 146
+ L+ +
Sbjct: 318 NKALVAE 324
>gi|15675876|ref|NP_270050.1| hypothetical protein SPy_2128 [Streptococcus phage 370.4]
gi|13623111|gb|AAK34771.1| hypothetical protein - phage associated [Streptococcus phage 370.4]
Length = 207
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKT 59
M+ + IR + + W V D+A AL N V + +
Sbjct: 1 MNKTETWN--GYTIRFV-EHQGEWWAVLADIAKALDL-NPKFIKQRLGDEVVSNNHVTDS 56
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RA 116
G Q++ I++E +Y + S A+ F+ WVF E + LR+ TG + ++ +
Sbjct: 57 LGRQQEMLIVNEFGIYETIFSSRKKEAKTFKLWVF-ETIKQLRQSTGLEGFQVFRMFDKE 115
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ R+ L+ K+ +K N + N+ V+ G+ ++
Sbjct: 116 HQKKAMNRLVDGLQNATKKDLIKANTI---ANKAVSNKYGLPKM 156
>gi|309806823|ref|ZP_07700812.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
03V1-b]
gi|308166797|gb|EFO68987.1| BRO family, N-terminal domain protein [Lactobacillus iners LactinV
03V1-b]
Length = 135
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ I FE+NKI+ I + +F ++V LG +N +A + +
Sbjct: 6 NGIRILRFENNKIK-IRTFNSEPYFNLENVCEILGIKNPEKAKERLGEQGVYLMFDYSSS 64
Query: 62 GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
Q+ ISE ++Y+L+++S F W+ EVLP
Sbjct: 65 EFQRKDFISESNLYKLILQSHRLENIDFVVWLASEVLP 102
>gi|76799192|ref|ZP_00781371.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
18RS21]
gi|76585446|gb|EAO62025.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
18RS21]
Length = 200
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVA-KRYPLKTEGGIQKV 66
+ IR + + W V D+A AL N V + + G Q++
Sbjct: 5 TWNGYTIRFV-EHQGEWWAVLADIAKALDL-NPKFIKQRLGDEVVSNNHVADSLGRQQEM 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK-TGSYSVEAPKL--RATSASTVL 123
I+SE +Y + S A+ F+ WVF E + LR+ TG + ++ + +
Sbjct: 63 LIVSEFGIYETIFSSRKKEAKTFKLWVF-ETIKQLRQSTGLEGFQVFRMFDKEHQKEAMA 121
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
R+ L+ ++K+ +K N + N+ V+ G ++
Sbjct: 122 RLTNSLDRVSKKDLIKANTI---TNKAVSNKFGYSKM 155
>gi|251783526|ref|YP_002997831.1| phage antirepressor protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392158|dbj|BAH82617.1| phage antirepressor protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323128277|gb|ADX25574.1| phage antirepressor protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 187
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 18/161 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE-------NSNEAINAHCKGVAK 53
M I +F+ +++ D Q F+A+DVA + Y N + I+ +
Sbjct: 19 MQVIATTDFQGHQLDIYGDI-QEPLFMARDVAEMIDYSQTTQGKWNVAKMISLVDEDEKL 77
Query: 54 RYPLKTE---GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV- 109
+ KV ++E +Y +L++S+ P A++F++ V +L +R G Y
Sbjct: 78 KGIPNGNTLINSGTKVWFLTEHGLYEVLMRSSKPKAKEFKKAVKN-ILKEIRLNGYYMQG 136
Query: 110 -----EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL 145
P S V + L+ + L+ L
Sbjct: 137 ELIQNSQPTPDIDDLSYVKQKLTDLQNVDSLQDLRWKMAKL 177
>gi|15675875|ref|NP_270049.1| hypothetical protein SPy_2127 [Streptococcus phage 370.4]
gi|13623110|gb|AAK34770.1| hypothetical protein - phage associated [Streptococcus phage 370.4]
Length = 255
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 22/174 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE------AINAHCKGVAKR 54
M IT F + D Q F+A+ VA + Y +++ A+ K
Sbjct: 81 MQVITTTNFHGQPLDIYGDI-QEPLFLARAVAEMIDYTKTSQGYYDVQAMLRKVDEDEKL 139
Query: 55 YPLKTEG------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS 108
+ EG QKV ++E +Y +L++S P A++F + V +L +R G Y
Sbjct: 140 KGMALEGTTKNFRSGQKVWFLTEHGLYEVLMRSNKPKAKEFRKAVKN-ILKEIRLNGYYM 198
Query: 109 VEAPKLRATSAST--------VLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
ST + + L +L L D + + + K+
Sbjct: 199 QGELVQELAQPSTQKLPGISDLTYILNKLADLVDMDNLADISNGIDRVQQLVKL 252
>gi|301063299|ref|ZP_07203844.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
gi|300442596|gb|EFK06816.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
Length = 110
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 1 MST--ITPFEFESNKIRTIVDK--DQNIWFVAKDVATALGYENSNEAI-------NAHCK 49
M+ I+ +F+ +R I D +W A+D+ AL E + + +
Sbjct: 1 MNDQIISTRKFDGGPVRFIRSNGKDVELWMTAEDIGNALELEEPIKDVESIFQQHKDELE 60
Query: 50 GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ P +GG ++R SE VY L S P A++F RWV
Sbjct: 61 EMTMLMPAGRDGGSGEIRAFSEEGVYLLAFFSNSPKAKEFRRWV 104
>gi|309805368|ref|ZP_07699417.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 09V1-c]
gi|308165295|gb|EFO67529.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 09V1-c]
Length = 59
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y + +
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKFADWVMYEVLPAIVYKGVYMTDKKAYDIAHDRS 56
>gi|126652730|ref|ZP_01724882.1| kilA protein, putative phage-related DNA binding protein [Bacillus
sp. B14905]
gi|126590419|gb|EAZ84538.1| kilA protein, putative phage-related DNA binding protein [Bacillus
sp. B14905]
Length = 269
Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 21/233 (9%)
Query: 1 MSTITPFEFESNKIRT----IVDKDQNIWFVAKDVATALGYENSNE-----AINAHCKGV 51
M+ + + T + N F+AKDVA + Y +++ + +
Sbjct: 1 MNQLQII--HEQVVLTKKFKVYGTLDNPLFLAKDVAEWIDYSKTSQGYYDVSTMLNTVDE 58
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
++ + ++ ++E +Y +L++S P A++F++ V +L +R G Y
Sbjct: 59 DEKCKHSSTNNLRSTWFLTEDGLYEVLMQSRKPIAKQFKKQVKN-ILKEIRINGGYIA-- 115
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSS 171
T+L + + + ++N+ L + T ++ A +
Sbjct: 116 -TNDDDDEMTILAKGFLIAQKTVERQKRENEALHQQIEQDAPYTKFGKVVA-----ISDG 169
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVS-GGYRPTPKGEERG 223
+ + E+ L L + G + + P K E G
Sbjct: 170 AVNVGTYAKMLYEKHGINLGRNKLMAWLRENGYLIKQKGAERNLPKQKYIENG 222
>gi|71897549|ref|ZP_00679794.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71732452|gb|EAO34505.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 138
Score = 72.3 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
QK+ ++EP +Y L +S P A F++W+ EVLP++RKTGSY
Sbjct: 2 QKLLCLAEPGLYFFLGRSDKPKALPFQKWLAGEVLPSIRKTGSY 45
>gi|9631117|ref|NP_047787.1| Ld-bro-m [Lymantria dispar MNPV]
gi|3822385|gb|AAC70336.1| Ld-bro-m [Lymantria dispar MNPV]
Length = 243
Score = 72.3 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 3 TITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK----------G 50
+T F S ++ T+ D +Q W A A L Y N N+AI H
Sbjct: 2 ALTKVNFVSGPLEVFTVQDDEQENWMAANPFAETLKYNNCNKAIRIHVSANNQKTLEELN 61
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ K L K + I+ V LL+ S + A++F W+
Sbjct: 62 IDKSQVLPRNVQA-KTKFINMNGVIELLLASQMQQAKEFRYWMTN 105
>gi|269123951|ref|YP_003306528.1| prophage antirepressor [Streptobacillus moniliformis DSM 12112]
gi|268315277|gb|ACZ01651.1| prophage antirepressor [Streptobacillus moniliformis DSM 12112]
Length = 228
Score = 71.9 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT-EGGIQKVRIISEPDV 74
I + + F A ++A + +N ++ + + + + +G K ++E +
Sbjct: 15 VIFGNEVSPMFNANEIAKIIENKNVSQMLKDVEEDEKELVIVTRGDGKTHKQWYLTEDGL 74
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY-SVEAPKLRATSASTVLRVHKHLEELA 133
Y +L S P A+KF++ V +E+L T+R+ Y V T + + K E
Sbjct: 75 YEVLFSSRKPIAKKFKKQV-KEILKTIRQKSGYIVVRKEDNEITIKQRIDNLMKEACERL 133
Query: 134 KQAGLK 139
++ K
Sbjct: 134 EKLQTK 139
>gi|237710505|ref|ZP_04540986.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265750278|ref|ZP_06086341.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229455227|gb|EEO60948.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263237174|gb|EEZ22624.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 190
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
++ I++ +VYRL+ +S LP+A+KFE W+F+EV+P++R+ G Y + R T + R
Sbjct: 1 MKYINKGNVYRLISRSQLPNAEKFESWLFDEVVPSIREKGYYGI---TDRGTLPEFIKRY 57
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGV 157
++ + ++L +++ + K+
Sbjct: 58 KDNIHMIPSNYFFVISELYVRLYAELEKVGYA 89
>gi|312875049|ref|ZP_07735067.1| BRO family protein [Lactobacillus iners LEAF 2053A-b]
gi|311089444|gb|EFQ47870.1| BRO family protein [Lactobacillus iners LEAF 2053A-b]
Length = 93
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
T+GGIQK+ SEP++Y+L+ +S P A+KF WV EVLP +
Sbjct: 43 TQGGIQKMNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAI 85
>gi|301063311|ref|ZP_07203856.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
gi|300442608|gb|EFK06828.1| BRO family, N-terminal domain protein [delta proteobacterium
NaphS2]
Length = 191
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 9 FESNKIRTIVDK--DQNIWFVAKDVATALGYENSNEAI-------NAHCKGVAKRYPLKT 59
FE IR I + D+ W +++ TAL + +AI + + +P++T
Sbjct: 11 FEDVGIRIIQVEGDDRTFWLSGEEIGTALELTDPKKAIFKIFERHKDELEEFSMLWPIET 70
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
GG Q VRI SE Y + S P A++F +WV
Sbjct: 71 AGGTQDVRIFSEEGTYLITFFSQSPKAKEFRKWV 104
>gi|85715440|ref|ZP_01046421.1| hypothetical protein NB311A_17084 [Nitrobacter sp. Nb-311A]
gi|85697635|gb|EAQ35511.1| hypothetical protein NB311A_17084 [Nitrobacter sp. Nb-311A]
Length = 187
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
+++ S P A++F++W+ EVLP++RKTG Y + P RV
Sbjct: 1 MILTSRKPEAKRFKKWITSEVLPSIRKTGGYGGKVPAFIRRYNDNWNRVTD 51
>gi|9964491|ref|NP_064959.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944700|gb|AAG02883.1|AF250284_177 AMV177 [Amsacta moorei entomopoxvirus 'L']
Length = 360
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVAT-ALGYENSN-EAINAHCKGVAKR-------- 54
F+F+ I+ DQ WF KD+ GY + ++I K+
Sbjct: 32 KIFKFKDTDIKINGTIDQ-PWFCLKDIIIYGFGYTKESYKSILKELNNSYKKSLYDIIVE 90
Query: 55 --YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
T+ K ++E +Y ++ + T SA+ F++++ +E+LP++RK +
Sbjct: 91 GGKTPPTKNNENKAIYVNESGLYYIVFQCTKDSAKDFQKYILDELLPSIRK-----LALK 145
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
K T + ++ + + K ++N+L+ K +I +++ + + L
Sbjct: 146 KYLNTLNNQKCKIDELFNQNKKIIS-QNNELINKTEYQNNEILKLNKQNQLALNKLQELG 204
Query: 173 NDEYLT---ITQIGERLNPPQRARFLNKLLLKR 202
+ T I + ++LN R + +K
Sbjct: 205 INLIETKEEIKDVKDKLNVVIEDRNVKPKEVKL 237
>gi|312873619|ref|ZP_07733666.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2052A-d]
gi|311090872|gb|EFQ49269.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2052A-d]
Length = 59
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAST 121
+ ISEP++Y+L+ +S P A+KF WV EVLP + G Y +
Sbjct: 1 MNFISEPNLYKLIFQSRKPEAEKFADWVMYEVLPAIVYKGVYMTYKKAYDIAHDRS 56
>gi|187932537|ref|YP_001886976.1| antirepressor, phage associated [Clostridium botulinum B str.
Eklund 17B]
gi|187720690|gb|ACD21911.1| antirepressor, phage associated [Clostridium botulinum B str.
Eklund 17B]
Length = 247
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/232 (18%), Positives = 87/232 (37%), Gaps = 16/232 (6%)
Query: 22 QNIWFVAKDVATALGYENSN--EAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+ F+AKDVA + Y+ S + I + + P+ G I+ + ++E +Y +L+
Sbjct: 6 EEPLFLAKDVAEWIDYDESKVGQMIKNIDEDEKETSPIFYSGQIRNMYFLTEDGLYEVLM 65
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSY--SVEAPKLRATSASTVLRVHKHLEELAKQAG 137
+S P A+KF++ +++L +RKTG Y + E+ A +L + + +
Sbjct: 66 QSKKPIAKKFKK-EIKKILRQIRKTGGYLGTDESMTDEEIMAKALLVAQNTINKKNELLK 124
Query: 138 LKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT-ITQIGERLNPPQRARFLN 196
K+ ++ K + ++ I + S+N + +I + R L
Sbjct: 125 AKEEEIQAKEKQLTETKEDLNNKNKF-INQIAVSENSLLVRECAKIASKNGVIIGERRLW 183
Query: 197 KLLLKRGLQVSKV---------SGGYRPTPKGEERGGKMCDVPMQHVEGSTQ 239
L G + G + + K V G Q
Sbjct: 184 DKLRAWGFIFKNLTEAKQDGIDRGYFEIVEGSKTNKDKTFTYKTTRVTGKGQ 235
>gi|322377258|ref|ZP_08051750.1| toxin-antitoxin system, antitoxin component, Xre family
[Streptococcus sp. M334]
gi|321281971|gb|EFX58979.1| toxin-antitoxin system, antitoxin component, Xre family
[Streptococcus sp. M334]
Length = 258
Score = 70.0 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 21 DQNIWFVAKDVATALGYENSNE------AINAHCKGVAKRYPLKTEG------GIQKVRI 68
+Q F+A+ +A + Y +++ A+ K +G Q+V
Sbjct: 99 EQEPLFLARAIAEMIDYTKTSQGYYDVQAMLRKVDEDEKVKGTPLDGTTKTFRSGQQVWF 158
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVLR 124
++E +Y +L++ST P A++F++ V + +L +R G Y VE P+ + T+
Sbjct: 159 LTEHGLYEVLMRSTKPKAKEFKK-VIKHILKEIRLNGYYMDGELVEEPQTTIKAPDTLAE 217
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
++ + +A + + + + + +R +K+T
Sbjct: 218 AERYYIDTLAKA-IAEAKNMDEKSRLTSKLT 247
>gi|71904523|ref|YP_281326.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94991457|ref|YP_599557.1| phage antirepressor protein [Streptococcus pyogenes MGAS10270]
gi|71803618|gb|AAX72971.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|94544965|gb|ABF35013.1| phage antirepressor protein [Streptococcus pyogenes MGAS10270]
Length = 188
Score = 70.0 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 22 QNIWFVAKDVATALGYENSNE------AINAHCKGVAKRYPLKTEGGI------QKVRII 69
Q F A+DVA + + + ++ K + EG QKV +
Sbjct: 38 QEPLFRARDVAEMIDHSKTRNGYYDVQSMLRKVDDDEKVKGVPLEGATKNFRSGQKVWFL 97
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV------EAPKLRATSASTVL 123
+E +Y +L++S+ P A++F + V +L +R G Y P S +
Sbjct: 98 TEHGLYEVLMRSSKPKAKEFRKAVKN-ILKEIRLNGYYMQGELVQNSQPTPDIDDLSYIK 156
Query: 124 RVHKHLEELAKQAGLKDNQLLL 145
+ L+++ L+ L
Sbjct: 157 QKLTDLQDVDSLQDLRWKMAKL 178
>gi|255657754|ref|ZP_05403163.1| toxin-antitoxin system, toxin component, Bro family [Mitsuokella
multacida DSM 20544]
gi|260849944|gb|EEX69951.1| toxin-antitoxin system, toxin component, Bro family [Mitsuokella
multacida DSM 20544]
Length = 184
Score = 69.6 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY--PLKTEGGIQKVR 67
+S ++R + D +I+FV KD+A LGY+N +AI H + K G +Q+
Sbjct: 7 DSFQLRAVALDD-DIYFVGKDLAKILGYKNERDAIRNHVRKHNKETCAIPDDRGVLQQTN 65
Query: 68 IISEPDVYRLLVKSTLPSAQKF-ERWVFEEVLP 99
IS L+ W +VLP
Sbjct: 66 CISVEGALELINTCRSTQWVPMVRNWFNSKVLP 98
>gi|145708113|ref|YP_001165288.1| hypothetical protein RPRSA1_gp39 [Ralstonia phage phiRSA1]
gi|139003902|dbj|BAF52416.1| hypothetical phage protein [Ralstonia phage phiRSA1]
Length = 184
Score = 69.2 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP--------LKTE 60
FE + +VD W +A+ALGY+N +I + A + L T
Sbjct: 12 FEDIE-FDVVDLHNVPWLRGSQIASALGYKNHRASIAELYERNADEFTPEMTQVVELNTA 70
Query: 61 GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV----LPTLRK 103
GG Q VRI S Y L + + A+ F RWV + + LP RK
Sbjct: 71 GGRQPVRIFSPRGCYLLGMLARTERAKAFRRWVLDVLEGRQLP--RK 115
>gi|99078519|ref|YP_611777.1| BRO-like [Ruegeria sp. TM1040]
gi|99078525|ref|YP_611783.1| BRO-like [Ruegeria sp. TM1040]
gi|99035657|gb|ABF62515.1| BRO-like protein [Ruegeria sp. TM1040]
gi|99035663|gb|ABF62521.1| Hypothetical 378 kDa protein in PTP-CTL intergenic region [Ruegeria
sp. TM1040]
Length = 191
Score = 69.2 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Query: 17 IVDKDQNIWFVAKDVATALGY--ENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDV 74
++ WF+A +V ALG N + + + Q +ISE V
Sbjct: 17 VISIGDQAWFLADEVYAALGLFLRNDPQTLVLQQSEWSVMSSQSGVTNAQTPVVISEAGV 76
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELA 133
Y+L S P ++F+ W +LPT+ G Y + ++ +T V + L
Sbjct: 77 YKLAFLSEEPEVREFQDWAMNTLLPTIIHDGFYMMGEEEMFSTPECDVTQTLIQSASLK 135
>gi|113461558|ref|YP_719627.1| prophage antirepressor [Haemophilus somnus 129PT]
gi|112823601|gb|ABI25690.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 221
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 79/218 (36%), Gaps = 37/218 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN----SNEAINAHCKGVAKRYP 56
M+T+T F+ S + ++++ IWF A D+ ALGY N N H
Sbjct: 1 MTTLT-FQNTSLSV---INQNNQIWFSALDIGKALGYSNGDIGVKNIYNRHQDEFTPCMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+T GGIQKVRI S + + + S A+ F +WV
Sbjct: 57 TLIDTQTNGGIQKVRIFSLRGTHLIGMLSHTKVAKAFRKWV------------------- 97
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVD-QLEAMDIKHLPSS 171
L T L E + L D + V + + K+ + E M
Sbjct: 98 -LDILDRETAQPKQLTLPEPKPRGILLDEEAFYVVAKAIAKLNESTFEWEKMMDLFSELE 156
Query: 172 DNDEYLTITQIG-ERLNPPQRARFLNKLLLKRGLQVSK 208
+ Y T +G N Q + K+++K +Q+
Sbjct: 157 SHRNYKTAFNLGVASYNLAQSSE---KIIMKNLVQMRN 191
>gi|9631038|ref|NP_047708.1| Ld-bro-c [Lymantria dispar MNPV]
gi|3822306|gb|AAC70257.1| Ld-bro-c [Lymantria dispar MNPV]
Length = 528
Score = 68.5 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 18/211 (8%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSN---EAINAHCKGVAKR--------------YPLKT 59
+V D ++ K++A LGY + + I K K P
Sbjct: 24 VVMPDGSVAVKLKELALFLGYADVKMSYKLIPEEWKITWKNLQNKLASKRHQLVAPPTTP 83
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
+ + EP VY L+ +ST P A++ ++V+E +LPT+RKTG + +
Sbjct: 84 ANWHPETLFVLEPGVYALMARSTKPMAKEKMKFVYETILPTIRKTGKFEMNKTSNINYET 143
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+++ + E D++L + V K + +A + S +
Sbjct: 144 EMKIKLLEEKMEHQSTVARNDSKLAEANMKLVEKERTIAVYDAKLAEKERSIVEMKLDHE 203
Query: 180 TQIGE-RLNPPQRARFLNKLLLKRGLQVSKV 209
I E + N + + K LQ+ +
Sbjct: 204 RPIVEMKRNYEHQMTEYKEREHKMQLQMKDM 234
>gi|29567179|ref|NP_818741.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467955|dbj|BAC67345.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 201
Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK---------RYPLKTEGGI 63
+I ++ +D +W +A A L Y +N+AI + K R T
Sbjct: 54 EIISVTTEDNQLWILASPFAKLLFYTKANDAIELYVSKENKKIYKDIKSSRCIPTTVVIR 113
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
K + I+ ++ L+ S +P+ KF+RW+ ++LP + + YS+ S+ +
Sbjct: 114 HKSKFINCAGLFELIDASLMPNIHKFKRWIEYKLLPVINQIKDYSINHNIDENYSSKEIE 173
Query: 124 RVHKHL--EELAKQAGLKDNQLLLKVNR 149
+ + + + + ++N+ L K +
Sbjct: 174 TLKQTILKKNTIIELQAQENRRLNKALQ 201
>gi|229120896|ref|ZP_04250138.1| hypothetical protein bcere0016_12050 [Bacillus cereus 95/8201]
gi|228662556|gb|EEL18154.1| hypothetical protein bcere0016_12050 [Bacillus cereus 95/8201]
Length = 105
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
+IR +V + VA D+ ALG + + + CK + K YP+ T GG Q + +I
Sbjct: 12 FGEIR-LVAVNGVYHAVASDITQALGNQKKSN-VTKSCKNIIK-YPIPTNGGKQMMNVIP 68
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
DV +++KS +P A+ FE W +E+LP
Sbjct: 69 FKDVQHIIIKSKMPRAESFEEWAEQELLP 97
>gi|70731106|ref|YP_260847.1| Sb46 [Pseudomonas fluorescens Pf-5]
gi|68345405|gb|AAY93011.1| Sb46 [Pseudomonas fluorescens Pf-5]
Length = 268
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGER 185
+ +A+ GL+ NQ LL N V GVD +E +K L + + T T++G +
Sbjct: 120 LDAAKRIAESFGLEGNQALLSANSMVKSAIGVDLMEMAGVKRLVNESQEMNFTPTELGAK 179
Query: 186 LNPPQRARFLNKLLLKRGLQ----VSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST-QQ 240
A +NKLL GLQ + TP G+ + D +H +G QQ
Sbjct: 180 FGI--SAASMNKLLADCGLQHHVIYKPGKKRWEVTPDGKLFA-VITDTGKKHSDGKPVQQ 236
Query: 241 LKWNSNL 247
+ W ++
Sbjct: 237 ILWKESV 243
>gi|261494509|ref|ZP_05990995.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309893|gb|EEY11110.1| putative prophage antirepressor [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 280
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+T+T F++ + +++D++ W A +V ALGY + + I+ + +
Sbjct: 1 MTTLT---FQNTTL-SVIDQNNQKWIPALEVGRALGYADPSANISKLYERNKDEFTPSMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE----EVLPTLRKTGSYS 108
+ T G+QKVRI S + L ++S A+ F +WV + EVL +
Sbjct: 57 AIIDMDTASGMQKVRIFSLRGCWLLGMRSHTKVAKDFRKWVLDILDKEVL-----QNNQQ 111
Query: 109 VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
+ +A + ++ ++ L ++ + ++ Q++ D++
Sbjct: 112 IAPLAEPTITAEEQNMLQNAVKATHERTKLSYGEIWARTKNKF-RVAEYKQIKRSDLR 168
>gi|213692398|ref|YP_002322984.1| hypothetical protein Blon_1525 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523859|gb|ACJ52606.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458539|dbj|BAJ69160.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 111
Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-ENS-NEAINAHCKGVAKRYPLKT 59
+ I PF+F ++R + D+ N WF+ DV LG N E ++A + +
Sbjct: 3 NQIQPFDFNGIQVRVLTDEHGNPWFLGADVCAILGTATNHIREYLDADEITNIRSTDIAQ 62
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFER 91
GG V +SE D + A F +
Sbjct: 63 NGGKAPV-FVSESDTSHSAPSTRQDGAHNFNK 93
>gi|114679966|ref|YP_758416.1| bro-f [Leucania separata nuclear polyhedrosis virus]
gi|39598697|gb|AAR28883.1| bro-f [Leucania separata nuclear polyhedrosis virus]
Length = 245
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 19/119 (15%)
Query: 5 TPFEFESNK--IRTIVDK---DQNIWFV--AKDVATALGYENSNEAINAHCKGVAKRYPL 57
F FE ++ + ++ K +Q F+ A VA LG+ +A+ + K
Sbjct: 11 KIFVFEQSEHCLYVLLHKWSREQEPMFMFEANAVARLLGFARPPKAVQLYVHDDWKIKWC 70
Query: 58 KTE------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ ++ E VY L+++S A+ F +W+ +LP LRKT
Sbjct: 71 NVPEFKMFAKDEVPLNWHPNMWLLHEVGVYALVMRSNTTVARVFVQWLIGAILPELRKT 129
>gi|298375388|ref|ZP_06985345.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 3_1_19]
gi|298267888|gb|EFI09544.1| toxin-antitoxin system, toxin component, Bro family [Bacteroides
sp. 3_1_19]
Length = 251
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 18 VDKDQNIWFVAKDVATALGYENSN------------EAINAHCKGVAKRYPLKTEGGIQK 65
I+ KDVA LG+E + I + + RY + G
Sbjct: 20 QMIGGEIFLNLKDVAIGLGFERERERNGNITKTIRWDNIKKYLSEIDDRYLTQEVG---L 76
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
I E D Y L + + +A+ F + + +E+LP +RK G+Y E
Sbjct: 77 DLFILESDFYELAMVAKSETAKAFRKKIAKEILPAIRKHGAYISENATPEQLD 129
>gi|282934411|ref|ZP_06339675.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
gi|281301532|gb|EFA93812.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
jensenii 208-1]
Length = 159
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 18/127 (14%)
Query: 98 LPTLRKTGSYSVEAPKLRAT-SASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
+P +RK G Y + A + T++++ L+E + + + Q V K +
Sbjct: 1 MPAIRKHGGYLTDKKIEEALYNPDTLIKLATQLKEEREGRLIAEQQ----VAELKPKASY 56
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT 216
+D++ +N E +T++ I + A NKLL +Q + +
Sbjct: 57 LDEI----------LENKELITVSVIAKDYG--MSAMEFNKLLHNLKVQFKQ-GKNWLLY 103
Query: 217 PKGEERG 223
+ G
Sbjct: 104 SSYQSLG 110
>gi|209978864|ref|YP_002300607.1| BRO C II [Adoxophyes orana nucleopolyhedrovirus]
gi|192758846|gb|ACF05381.1| BRO C II [Adoxophyes orana nucleopolyhedrovirus]
Length = 225
Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG---- 62
F +I ++ +D +W +A A L Y +N+AI + K+ + +
Sbjct: 47 FFNHMIEIISVTTEDNQLWILASPFAKLLYYTKANDAIELNVSKENKKIYKEIKSINTMP 106
Query: 63 -----IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRAT 117
K + I+ ++ L+ S +P+ KF+RW+ ++LP + + +YS+
Sbjct: 107 TTTIIRPKSKFINCAGLFELIDASFMPNIHKFKRWIEYKLLPVINQMENYSINHSIDENY 166
Query: 118 SASTVLRVHKHL--EELAKQAGLKDNQLLLKVNRGVTK 153
S+ + + + + + + ++N+ L + + K
Sbjct: 167 SSKEIETLKQTILKKNTIIELQAQENRRLNEALQMREK 204
>gi|9631535|ref|NP_048094.1| ORF MSV023 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049888|gb|AAC97848.1| ORF MSV023 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 365
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYR 76
I+ + ++ AKD+A L Y++ + I + K K + ++ +Y
Sbjct: 9 IITYNNCSYYKAKDIADILNYKSVDYFIKKYVKNEHKI-------NYESTIYVNNSGLYY 61
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTL 101
++ KS A+KF+ W+ EE LP +
Sbjct: 62 IMFKSKKHEAEKFQNWIKEENLPEI 86
>gi|212693449|ref|ZP_03301577.1| hypothetical protein BACDOR_02965 [Bacteroides dorei DSM 17855]
gi|237710504|ref|ZP_04540985.1| phage associated-antirepressor [Bacteroides sp. 9_1_42FAA]
gi|265750277|ref|ZP_06086340.1| antirepressor [Bacteroides sp. 3_1_33FAA]
gi|212663962|gb|EEB24536.1| hypothetical protein BACDOR_02965 [Bacteroides dorei DSM 17855]
gi|229455226|gb|EEO60947.1| phage associated-antirepressor [Bacteroides sp. 9_1_42FAA]
gi|263237173|gb|EEZ22623.1| antirepressor [Bacteroides sp. 3_1_33FAA]
Length = 67
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK--GVAKRYPLK 58
N+IRTI ++D +WF A DVA LGY N +AI +CK GV R PL+
Sbjct: 13 FNQIRTI-EEDGKLWFCATDVARVLGYVNPRDAIIRYCKSMGVVIRAPLQ 61
>gi|300312121|ref|YP_003776213.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
gi|300074906|gb|ADJ64305.1| prophage antirepressor protein [Herbaspirillum seropedicae SmR1]
Length = 48
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN 45
M+ I PF FE IR + + FV KD+ AL Y N N+A+
Sbjct: 1 MNPI-PFHFEGRDIRVLASESSEPLFVGKDICEALDYSNPNDAMR 44
>gi|167622084|ref|YP_001672378.1| hypothetical protein Shal_0143 [Shewanella halifaxensis HAW-EB4]
gi|167352106|gb|ABZ74719.1| hypothetical protein Shal_0143 [Shewanella halifaxensis HAW-EB4]
Length = 260
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 28/200 (14%)
Query: 2 STITPFEFESNK----IRTIVDKDQNIWFVAKDVATAL-------GYENSNEAIN----- 45
+ + +E IRT + D + F DV L G N I
Sbjct: 3 NNLVNVCYEGTSGETDIRT-LYIDNILHFSLNDVFILLNKENKGMGERNPARYIPNLIKS 61
Query: 46 ---AHCKGVAKRYPLKTEG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
K P G++ +++P + R++ P+ +KF+RW++ +V+P+L
Sbjct: 62 QIHDLDDDEFKNLPHPKPTPGLEVETFVTQPGLNRVMGSDDSPAGRKFQRWLYHDVVPSL 121
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL-KVNRGVTKITGVDQL 160
K G Y P S + ++ + + + ++ L D L K+ + V ++G
Sbjct: 122 TKHGVY----PAPITPQGSALSQMAEIIAQNSR--ALADTILKQDKLEQEVKAVSGDISE 175
Query: 161 EAMDIKHLPSSDNDEYLTIT 180
I+ L SS++ +T
Sbjct: 176 VKERIEKLESSNSQNEYRLT 195
>gi|170765787|ref|ZP_02900598.1| BRO family, N- domain protein [Escherichia albertii TW07627]
gi|170124933|gb|EDS93864.1| BRO family, N- domain protein [Escherichia albertii TW07627]
Length = 263
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
QK +++P +YR++ + ++F++W+F EV+P+L K G Y P+ + + + +
Sbjct: 84 QKEIFVTQPGLYRVMSSDRSAAGKRFQKWLFHEVIPSLTKHGVY-PPPPEAKGSVLAQMA 142
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ A K +L V++ K+ V+
Sbjct: 143 EILAQNSRALADAIHKHEKLAEDVSQVKGKVADVES 178
>gi|85715439|ref|ZP_01046420.1| hypothetical protein NB311A_17079 [Nitrobacter sp. Nb-311A]
gi|85697634|gb|EAQ35510.1| hypothetical protein NB311A_17079 [Nitrobacter sp. Nb-311A]
Length = 78
Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG 62
+ FE+E + ++D+D WFV +V LG N ++A + G
Sbjct: 4 ALKVFEYEQQEKFRVIDRDGEPWFVLNEVCKQLGIANVSDAARRLDGDEKDDIDIVDVAG 63
Query: 63 IQKVRIISEP 72
++ I+S
Sbjct: 64 RKQKFIVSTS 73
>gi|211731859|gb|ACJ10157.1| conserved hypothetical protein [Bacteriophage APSE-3]
Length = 260
Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 26/222 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T+ F + + TI ++ IWF + ++A AL Y+ +AI + +
Sbjct: 1 MNTLI---FRNTILETI-SRNGEIWFTSAEIARALQYKKI-DAITQIYARNLDEFTSQMS 55
Query: 57 ---------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE-----EVLPTLR 102
+ + VRI S + + + + P A++F +WV + V T
Sbjct: 56 MTLNLRVNGINNSLREKVVRIFSLRGAHLIAMFANTPVAKEFRKWVLDILDKQTVNQTAN 115
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
T Y PK + R HL + V + ++TG E
Sbjct: 116 FTPKYQ-PQPKAVERFTHSDTRNLTHLVWCMTNGFRFEQSWTRAVWLALREVTGTPSPER 174
Query: 163 MDIKHLPSSDNDEY--LTITQIGERLNPPQRARFLNKLLLKR 202
I+H+P ++ IT+ ++ + + +LL KR
Sbjct: 175 FQIEHIPLMADECRRIYYITETLRQIINEAEKQTIKRLLRKR 216
>gi|215401347|ref|YP_002332651.1| BRO-F [Helicoverpa armigera multiple nucleopolyhedrovirus]
gi|198448847|gb|ACH88637.1| BRO-F [Helicoverpa armigera multiple nucleopolyhedrovirus]
Length = 229
Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 19 DKDQNIWFVAKDVATALGYENSNEAINA-----HCKGVAKRYPLKTEGGIQKVRIISEPD 73
+ + WF A + A +GY+ + I + K + L +++
Sbjct: 26 NDNVQFWFAASEFARCMGYQRPDNIILQKIDLIYRKKFEEFNILLHTSTHPHTVFVNKAG 85
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ +++ K L +A K ++W++EEV P +
Sbjct: 86 LIQMITKCKLKNADKLQKWLYEEVFPKI 113
>gi|116050370|ref|YP_790813.1| hypothetical protein PA14_33290 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585591|gb|ABJ11606.1| hypothetical protein PA14_33290 [Pseudomonas aeruginosa UCBPP-PA14]
Length = 251
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 94 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 153
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 154 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 188
>gi|254780987|ref|YP_003065400.1| hypothetical protein CLIBASIA_04440 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040664|gb|ACT57460.1| hypothetical protein CLIBASIA_04440 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 110
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQV-SKV 209
+ + GV+ L+ +LP+ +N Y T TQ+G++L A +NK L + G +
Sbjct: 1 MESVLGVNVLQ---DINLPTPNNLPYYTPTQLGKKLATKPSAIKVNKKLREWGFLLEEHE 57
Query: 210 SGGYR--PTPKGEERGGKMCDVPMQHVEG-STQQLKWNSNLLVSF 251
SG R TPKG + GG+ D + +G QQ+KW+ ++ S
Sbjct: 58 SGRKRDVLTPKGAKGGGRYFDTGKKRSDGTIVQQIKWHPPIVESL 102
>gi|256368719|ref|YP_003106225.1| hypothetical protein BMI_I263 [Brucella microti CCM 4915]
gi|261751614|ref|ZP_05995323.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|255998877|gb|ACU47276.1| hypothetical protein BMI_I263 [Brucella microti CCM 4915]
gi|261741367|gb|EEY29293.1| predicted protein [Brucella suis bv. 5 str. 513]
Length = 106
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 20 KDQNI--WFVAKDVATAL-----GYEN----SNEAINAHCKGVAKRYPLK--TEGGIQKV 66
+D WFVA D+ L G E K + +Y L E + V
Sbjct: 3 QDGERTSWFVAVDLYDILFGLRTGISTRWFLKREETKTLRKAESAQYALSNLFEAKARLV 62
Query: 67 RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
+ISE +Y+L++KS AQKF+ W+ +V+P
Sbjct: 63 SLISEAGLYKLILKSRKKEAQKFQNWLARDVIP 95
>gi|218891597|ref|YP_002440464.1| hypothetical protein PLES_28731 [Pseudomonas aeruginosa LESB58]
gi|218771823|emb|CAW27600.1| hypothetical [Pseudomonas aeruginosa LESB58]
Length = 264
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 107 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 166
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 167 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 201
>gi|9964371|ref|NP_064838.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944580|gb|AAG02763.1|AF250284_57 AMV057 [Amsacta moorei entomopoxvirus 'L']
Length = 353
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 81/229 (35%), Gaps = 18/229 (7%)
Query: 23 NIWFVAKDVA-TALGYENSNE--AINAHCKGVAKRYP---------LKTEGGIQKVRIIS 70
N WF KD+ L Y + + + K Y T+ K ++
Sbjct: 49 NPWFKGKDILIDGLEYTDQSAKCVLKRLNTSFKKSYNDIISVEGNLPPTKNNDNKAIYVN 108
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK--TGSYSVEAPKLRATSASTVLRVHKH 128
E +Y +++ T SA+ F+ ++ ++LP++RK Y + ++
Sbjct: 109 EAGLYYIILHCTKDSAKGFQNYILFDLLPSIRKRAQKKYMDIISNQKDKIDDLFKKIDNQ 168
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKIT--GVDQLEAM-DIKHLPSSDNDEYLTITQIGER 185
E+ + ++N+LL + + K+ G++ +E +IK + N +
Sbjct: 169 SLEINNISK-QNNELLTQNQLALNKLQELGINLIETKEEIKDVKDKLNVVIEDRNVKPKE 227
Query: 186 LNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+ + L ++ + + Y T K + ++
Sbjct: 228 VKLQHKYLLLKNKIINNEYKFIRAQDQYIKTNKSNWLEKHNVIIDEKYN 276
>gi|115334660|ref|YP_764506.1| hypothetical protein GPGV1_gp50 [Geobacillus phage GBSV1]
gi|84688610|gb|ABC61306.1| hypothetical protein [Geobacillus phage GBSV1]
Length = 51
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1 MSTITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG 50
M+ + F +R + + + N V DVA ALGY +EAI++HC+G
Sbjct: 1 MNQLQIFNHPMFGDVRFV-EINNNPHAVGNDVAKALGYSRPHEAISSHCRG 50
>gi|160932523|ref|ZP_02079913.1| hypothetical protein CLOLEP_01361 [Clostridium leptum DSM 753]
gi|156868482|gb|EDO61854.1| hypothetical protein CLOLEP_01361 [Clostridium leptum DSM 753]
Length = 149
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 23 NIWFVAKDVATALGYENSN--EAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
F A DVA + Y + N + + PL G + V ++E +Y +L +
Sbjct: 22 KPLFKASDVANIIDYSDGNVWKMLEMCEADEKLNLPLVVAGQRRSVSFVTETGLYNVLSQ 81
Query: 81 STLPSAQKFERWVFEEVLPTLRKT-GSYSVEAPKLRATSASTV 122
S P A+ + R + EE++ TLRKT G E + A T+
Sbjct: 82 SRKPIARAWRRIIHEELI-TLRKTRGKNIAEQFEDWDNQADTI 123
>gi|254240859|ref|ZP_04934181.1| hypothetical protein PA2G_01533 [Pseudomonas aeruginosa 2192]
gi|126194237|gb|EAZ58300.1| hypothetical protein PA2G_01533 [Pseudomonas aeruginosa 2192]
Length = 240
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 83 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 142
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 143 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 177
>gi|49082956|gb|AAT50878.1| PA2423 [synthetic construct]
Length = 265
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 107 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 166
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 167 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 201
>gi|15597619|ref|NP_251113.1| hypothetical protein PA2423 [Pseudomonas aeruginosa PAO1]
gi|9948468|gb|AAG05811.1|AE004669_8 hypothetical protein PA2423 [Pseudomonas aeruginosa PAO1]
Length = 264
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 107 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 166
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 167 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 201
>gi|319776467|ref|YP_004138955.1| phage antirepressor protein [Haemophilus influenzae F3047]
gi|317451058|emb|CBY87291.1| Phage antirepressor protein [Haemophilus influenzae F3047]
Length = 284
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKRYP----LKTEGGIQKVRI 68
+++++ IW ++ ALGY + +++ H ++ + T GG+QKVRI
Sbjct: 14 VINQNNQIWLTVTEIGKALGYSDPFKSVKNIYDRHRDEFTEKMTALIDMPTAGGLQKVRI 73
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
S + + + + A+ F +WV + + ++K+ A + +
Sbjct: 74 FSLRGAHLIAMFARTKIAKAFRKWVLDVLDEEVKKS-----TALLPNTITPEQQQAIQSA 128
Query: 129 LEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+++ + GL ++ ++ I DQL
Sbjct: 129 VQQAHHRTGLHWQEIYRQLKAMFH-IAKYDQL 159
>gi|225575219|ref|ZP_03783829.1| hypothetical protein RUMHYD_03308 [Blautia hydrogenotrophica DSM
10507]
gi|225037512|gb|EEG47758.1| hypothetical protein RUMHYD_03308 [Blautia hydrogenotrophica DSM
10507]
Length = 167
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 19 DKDQNIWFVAKDVATALGY----ENSNEAINAHC-KGVAKRYPLKTE--GGIQKVR---I 68
+KD + + VA LG+ ++ NE + + G K + T G +
Sbjct: 32 EKDGTAYLKLEAVARGLGFTFIAKSGNEVVRWNVVHGYLKDLGVATSRNGSCYQEDCPEF 91
Query: 69 ISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKH 128
I E YRL +K+ ++KF+ V +E++P++RKTG Y ++ + + ++ K
Sbjct: 92 IPENIFYRLAMKAKNEVSEKFQAKVADEIIPSIRKTGGYQIQ--NMSKELKAILMLDQKQ 149
Query: 129 LEELAKQAGLKDNQ 142
+E + L++
Sbjct: 150 VEADERLTKLENAM 163
>gi|9631451|ref|NP_048266.1| ORF MSV195 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049804|gb|AAC97764.1| ORF MSV195 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 87
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC--------KGVAKRYPLKTE 60
F + KI ++D + + F AK+ A L Y N +AI H K +
Sbjct: 8 FNNKKIHIVIDNNNKVLFKAKNCAEILKYTNPLKAIRDHVRQKHQISFKNINMNDSFILN 67
Query: 61 GGIQKVRIISEPDVYRLLVK 80
I+E D Y L+ K
Sbjct: 68 NIHPDTIFITESDFYSLISK 87
>gi|75906051|gb|ABA29397.1| gp30 [Bacteriophage APSE-2]
Length = 258
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 30/223 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T+ F + + TI ++ IWF + ++A AL Y+ +AI + +
Sbjct: 1 MNTLI---FRNTILETI-SRNGEIWFTSAEIARALQYKKI-DAITQIYARNLDEFTSQMS 55
Query: 57 ---------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL--PTLRKTG 105
+ + VRI S + + + + P A++F +WV ++L TL +T
Sbjct: 56 MTLNLRVNGINNSLREKVVRIFSLRGAHLIAMFANTPVAKEFRKWVL-DILDKQTLNQT- 113
Query: 106 SYSVEAPKLRATSASTV----LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
P+ + +A R HL + V + ++TG E
Sbjct: 114 --VKPNPQYHSKAAERFTHSDTRNLTHLVWCMTNGFRFEQPWTRAVWLALREVTGTPSPE 171
Query: 162 AMDIKHLPSSDNDEY--LTITQIGERLNPPQRARFLNKLLLKR 202
I+H+P ++ IT+ ++ + + +LL KR
Sbjct: 172 RFQIEHIPLMADECRRIYYITETLRQIINEAEKQTIKRLLRKR 214
>gi|197690559|emb|CAQ19386.1| putative prophage antirepressor [Geobacillus stearothermophilus]
Length = 91
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN-----EAINAHCK-GVAKR 54
M+TI E+ + IR I W V D++ AL + + +AI K V
Sbjct: 1 MTTIHIEEWNGHSIRFIEKSAGCWWAVLADISRALKLQTAAVARRLKAIEKQVKKDVISS 60
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKS 81
+ L T GG Q++ I++E +Y + +S
Sbjct: 61 HTLPTSGGPQEMIIVNEYGIYEAITQS 87
>gi|162447446|ref|YP_001620578.1| phage proteinputative antirepressor [Acholeplasma laidlawii PG-8A]
gi|161985553|gb|ABX81202.1| phage protein, putative antirepressor [Acholeplasma laidlawii
PG-8A]
Length = 248
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 59/166 (35%), Gaps = 25/166 (15%)
Query: 4 ITPF-EFESNKIRTIVDKDQNIWFVAKDVATALGYEN--------SNEAINAHCKGVAKR 54
I F K+RT + DQ F KD+ G +N + A+
Sbjct: 2 IKEFHNNRYGKVRTAIIDDQ-PCFNLKDLTHIYGIKNINDFRSRIPSNAVKTLE------ 54
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ G + I + + +ST A+ W++ VLP L K Y V+ K
Sbjct: 55 -VKDSNGASKNKYFIIADYLSSCMFQSTKTDAEAISDWLYRTVLPNLIKYQKYKVDEFK- 112
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
L + E+L + + + QL L KI +D+L
Sbjct: 113 ---DPDVALSFLEEFEDLRVRHSVVETQLKLNA----PKIKYIDRL 151
>gi|22549523|ref|NP_689296.1| BRO-F [Mamestra configurata NPV-B]
gi|22476702|gb|AAM95108.1| BRO-F [Mamestra configurata NPV-B]
Length = 229
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 5 TPF--EFESNKIRTI---VDKDQ-NIWFVAKDVATALGYENSNEAINA-----HCKGVAK 53
F + +++ I +DKD+ WF A + A +GY+ + I + K +
Sbjct: 6 QTFYLNNKPVEVKFIKENLDKDKVQFWFAASEFARCMGYQRPDNIILQKIDLIYRKKFEE 65
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
L +++ + +++ K L +A K ++W++EEV P +
Sbjct: 66 FNILLHTSTHPHTVFVNKAGLVQMITKCKLKNADKLQKWLYEEVFPKI 113
>gi|9964369|ref|NP_064837.1| putative antirepressor [Amsacta moorei entomopoxvirus 'L']
gi|9944578|gb|AAG02761.1|AF250284_55 AMV055 [Amsacta moorei entomopoxvirus 'L']
Length = 133
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 6 PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN-EAINAHCKGVAKRY--------- 55
F+F + I I + N WF KDV L YE S+ + I K K+
Sbjct: 33 IFKFNNKSIDVIGTLN-NPWFCGKDVLNILEYEKSSFKKILQRLKESYKKSYREILYKVG 91
Query: 56 ---PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
G K+ I++ +Y L++ L +A F+ +V
Sbjct: 92 DNLSPTLNGNNSKIIYINDSGLYTLIMNFNLNNAIVFKEYV 132
>gi|148747758|ref|YP_001285837.1| hypothetical protein GBVE2_gp031 [Geobacillus virus E2]
gi|113715700|gb|ABI36849.1| hypothetical protein [Geobacillus virus E2]
Length = 274
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 17/192 (8%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
G K +++E + + T P A K + EE K ++
Sbjct: 86 TDVTGRKLKRYLLTEEAFTLVAMSYTTPEAMKMKVRFIEEF-----KRMKEELQKRHQPK 140
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T+A +L + + E ++ + + + ++QLE K L +
Sbjct: 141 TTAEMLLMYAQQMVETERKLKALEE-------DNARQNSRIEQLENKIEKRLTEEFEMQL 193
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ-HVE 235
+T TQIG+ P + +NKLL + GLQ V G + PT +G++ P+Q
Sbjct: 194 VTPTQIGKMFEPAISGKEVNKLLQRAGLQWR-VGGEWVPTAEGKKYSSSE---PIQLESG 249
Query: 236 GSTQQLKWNSNL 247
QLKW +
Sbjct: 250 KMVYQLKWQRRV 261
>gi|259501437|ref|ZP_05744339.1| bro family toxin-antitoxin system [Lactobacillus iners DSM 13335]
gi|302190841|ref|ZP_07267095.1| putative antirepressor - phage associated protein [Lactobacillus
iners AB-1]
gi|309803442|ref|ZP_07697536.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 11V1-d]
gi|312870903|ref|ZP_07731008.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 3008A-a]
gi|312872247|ref|ZP_07732320.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2062A-h1]
gi|325913373|ref|ZP_08175740.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 60-B]
gi|259167186|gb|EEW51681.1| bro family toxin-antitoxin system [Lactobacillus iners DSM 13335]
gi|308164451|gb|EFO66704.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LactinV 11V1-d]
gi|311092331|gb|EFQ50702.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 2062A-h1]
gi|311093593|gb|EFQ51932.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners LEAF 3008A-a]
gi|325477299|gb|EGC80444.1| toxin-antitoxin system, toxin component, Bro domain protein
[Lactobacillus iners UPII 60-B]
Length = 44
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ SEP++Y+L+ +S P A+KF WV EVLP +
Sbjct: 1 MNFRSEPNLYKLIFQSRKPEAEKFADWVKSEVLPAI 36
>gi|296389168|ref|ZP_06878643.1| hypothetical protein PaerPAb_13511 [Pseudomonas aeruginosa PAb1]
Length = 170
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 13 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 73 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 107
>gi|107101872|ref|ZP_01365790.1| hypothetical protein PaerPA_01002917 [Pseudomonas aeruginosa PACS2]
Length = 170
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 13 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 73 LISESGAYAALIYQQRGDGSELRRWLSGEVVPELR 107
>gi|313110667|ref|ZP_07796535.1| hypothetical protein PA39016_002590002 [Pseudomonas aeruginosa
39016]
gi|310883037|gb|EFQ41631.1| hypothetical protein PA39016_002590002 [Pseudomonas aeruginosa
39016]
Length = 170
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGI-QKVR 67
F ++ + D WFV D A + + + + A+R L++E G Q
Sbjct: 13 FRQQRLLRALLIDDQAWFVLDDFARLIEHSQPEQMLARLDDDQARRESLRSERGEDQAQW 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ + RW+ EV+P LR
Sbjct: 73 LISESGAYAALIYQQRGDGGELRRWLSGEVVPELR 107
>gi|168495146|ref|YP_001686884.1| hypothetical protein APCd_gp43 [Azospirillum phage Cd]
gi|168148905|emb|CAO99369.1| hypothetical protein [Azospirillum phage Cd]
Length = 325
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
V V K + + G+ NQ L +R +TG+D LE + + L + ++ L+ T
Sbjct: 181 AVAPVFKDFFSIGRLIGMDRNQAALGASRATRHLTGIDPLEMLGAQQLVAPQQEDDLSPT 240
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQV----SKVSGGYRPTPKGEERGGKMCDVPMQHVEG 236
IG +L + +N LL + G Q SK + PT KG+ D +H +G
Sbjct: 241 DIGVKLG-GKSGIAVNNLLAQNGFQTGWRDSKNRPHWEPTDKGKPFA-VWKDTAKKHSDG 298
Query: 237 ST-QQLKWNSNLLVSFLQNELIN 258
+ +QL+W++ ++ + L+ E+ N
Sbjct: 299 TPVRQLRWSAGIIRA-LETEIGN 320
>gi|212499738|ref|YP_002308546.1| hypothetical protein APSE233 [Bacteriophage APSE-2]
gi|238898729|ref|YP_002924410.1| APSE-2 prophage; hypothetical / Antirepressor [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|211731707|gb|ACJ10195.1| conserved hypothetical protein [Bacteriophage APSE-2]
gi|229466488|gb|ACQ68262.1| APSE-2 prophage; conserved hypothetical / Antirepressor [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 257
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 27/221 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T+ F + + TI ++ IWF + ++A AL Y + +A+ N + ++
Sbjct: 1 MTTLI---FRNTVLETIF-HNREIWFTSAELARALEYTET-DAVTKIFNRNKDEFSECMT 55
Query: 57 LKTEGG--------IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL--PTLRKTGS 106
G VRI S + + + + A++F +WV ++L + +T S
Sbjct: 56 TTVNLGVVRKTGTVRMPVRIFSLRGAHLIAMFARTHIAKEFRKWVL-DILDKQAVNQTSS 114
Query: 107 YSVEAPKLRATS--ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
+ P+ +A + + R HL + V + ++TG E
Sbjct: 115 F-TPQPQSKAVERFSHSDTRNLTHLVWCMTNGFRFERSWSNAVWLALREVTGTPSPERFQ 173
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRA---RFLNKLLLKR 202
++H+P DE I I E L + + ++L KR
Sbjct: 174 VEHIPLMT-DECRRIYYITETLRQIINDAEKQAIKRILRKR 213
>gi|322689043|ref|YP_004208777.1| hypothetical protein BLIF_0856 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460379|dbj|BAJ70999.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 61
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALG 36
+ I PF+F ++R + D+ N WF+ DV LG
Sbjct: 3 NQIQPFDFNGIQVRVLTDEHGNPWFLGADVCAILG 37
>gi|75758182|ref|ZP_00738307.1| Antirepressor [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228904805|ref|ZP_04068859.1| Antirepressor [Bacillus thuringiensis IBL 4222]
gi|74494236|gb|EAO57327.1| Antirepressor [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|228854819|gb|EEM99423.1| Antirepressor [Bacillus thuringiensis IBL 4222]
Length = 271
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 22 QNIWFVAKDVATALGYENS--NEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
+ F+AKDVA + Y+ S N+ + + R + T+ G Q+ +++E +Y +L+
Sbjct: 31 EEPLFLAKDVAQWIEYDVSSINKMLRNVDEDEKVRKIVPTQSGAQESWMLTEQGMYEVLL 90
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLK 139
+S P A++ ++ V + + LR +G + L+ + + ++ + L + +
Sbjct: 91 QSRKPVAKECKK-VVKAHMKELRVSGVTLRQNLTLQQQTVVLLSKLDEVLIQQEAELAQL 149
Query: 140 DNQLLL---KVNRGVTKITGVD----QLEAMDIKHLPSSDNDEYLTITQIGERL 186
++Q+ + +I VD L+ K+ D +TI +
Sbjct: 150 NSQIETLGEQTELLEEEIRVVDNQIKALQPYAKKYKEFLSEDALMTIDDFARIM 203
>gi|9633590|ref|NP_051004.1| P43 [Acyrthosiphon pisum bacteriophage APSE-1]
gi|6118038|gb|AAF03986.1|AF157835_43 P43 [Endosymbiont phage APSE-1]
Length = 256
Score = 62.3 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 24/219 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----------AHCKG 50
M+T+ F + + TI + IWF + +A AL Y +S + H
Sbjct: 1 MTTLV---FRNTVLETI-SHNGQIWFTSSVLAKALQYSSSKSVTDLYHKNSDEFADHMSK 56
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL--PTLRKTGSYS 108
V L K RI S + + + S P A++F +WV ++L T+ +T +++
Sbjct: 57 VVDSTTLGKS--RNKTRIFSLRGAHLIAIFSRTPVAKEFRKWVL-DILDKQTVNQTANFT 113
Query: 109 VE---APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ PK + R HL + V + ++TG E I
Sbjct: 114 PKYQSQPKAAERFTHSDTRNLTHLVWCMTNGFRFEQSWTRAVWLALREVTGTPPPERFQI 173
Query: 166 KHLPSSDNDEY--LTITQIGERLNPPQRARFLNKLLLKR 202
+H+P ++ IT+ ++ + + +LL KR
Sbjct: 174 EHIPLMADECRRIYYITETLRQIINEAEKQTIKRLLRKR 212
>gi|229004118|ref|ZP_04161919.1| KilA protein, putative phage-related DNA binding protein [Bacillus
mycoides Rock1-4]
gi|228756979|gb|EEM06223.1| KilA protein, putative phage-related DNA binding protein [Bacillus
mycoides Rock1-4]
Length = 127
Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Query: 43 AINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
I++ + L G + + ++E +Y +L++S P A+ F++ V +++L +R
Sbjct: 1 MIDSIDEDEKLNGTLFHSGQNRHMWFLTEDGIYEVLMQSRKPIAKAFKKEV-KKILKEIR 59
Query: 103 KTGSYS-VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
+ G Y + L V + E L+ Q++ + + V K +
Sbjct: 60 QNGGYIHTNENDSDELIMARALLVAQKAIERKDAQLLEAQQVIEEQSPMVEKYKKYLESA 119
Query: 162 AMDIKH 167
Sbjct: 120 THRYIQ 125
>gi|13160526|gb|AAK13283.1| unknown [Culex nigripalpus NPV]
Length = 410
Score = 61.9 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 27/173 (15%)
Query: 22 QNIWFVAKDVATALGYENSNE-------AINAHCKGVAKRYP----------------LK 58
W VA D+A LGYE + A + P ++
Sbjct: 164 NEPWVVAADLARCLGYEKYRQTHTRILAAFKRKLSDLVHTEPFSGTVESEVARLEGAPVE 223
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP---KLR 115
+ + +++E ++++L+ S LP+ QK++ VF ++LP R G +
Sbjct: 224 LSSRERDIVVVNEGGIHQMLIGSRLPNVQKYKELVFGKILPAARARGELQIGTIGQGDGG 283
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQL-LLKVNRGVTKITGVDQLEAMDIKH 167
A + L+ ++ + EL +++L ++K+ + + + +L+ D++H
Sbjct: 284 AVEPTNQLQSNEKILELELALSRSNSELKVVKLEQLRVQESYESKLKITDMEH 336
>gi|317483899|ref|ZP_07942837.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
gi|316924856|gb|EFV46004.1| BRO family domain-containing protein [Bilophila wadsworthia 3_1_6]
Length = 290
Score = 61.9 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 85/236 (36%), Gaps = 36/236 (15%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVAKDVATALGYEN---------------SNEAI 44
M+T F F + + +D WF + ++A ALGY+ + +
Sbjct: 1 MTTFLCFNDFTFSPV----TRDNQPWFKSSEIARALGYKREDFLSKLYRKNADEFTPDMT 56
Query: 45 NAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+R + +VRI S + L + + P A+ F RWV + + +
Sbjct: 57 QVVENRAERRNGVPGNLSDGRVRIFSLRGCHLLAMFARTPVAKAFRRWVLDV----IEQY 112
Query: 105 GSYS-VEAPKLRATSASTVLR--VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
G E P +T ++ R + + AK A + + L +V +++++
Sbjct: 113 GDRVPAEQPVTLSTPSTPADRKPLRSLVNAWAKLANVHQSTLWPQVRAHFQ----LERID 168
Query: 162 AMDIKHLPSSDNDEYLTITQIG-----ERLNPPQRARFLNKLLLKRGLQVSKVSGG 212
+ ++ LP + I ++ + L+ R L+ L V K
Sbjct: 169 DLPVEWLPDALAWVQGKIDELSRVPEVKVLSCEARLAQLDAQLDALRKHVEKERSD 224
>gi|187477806|ref|YP_785830.1| phage protein [Bordetella avium 197N]
gi|115422392|emb|CAJ48917.1| putative phage protein [Bordetella avium 197N]
Length = 170
Score = 61.9 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT- 59
M + F++ IR +++KD W A D+A ALGY N+++ + + A+ T
Sbjct: 2 MKELM---FQNQSIR-LIEKDGKQWASAADIARALGYANTDKVARIYDRHKAEFSDSMTC 57
Query: 60 -------------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G + R+ S + + + + +AQ F RWV +VL
Sbjct: 58 LAMVQDLDPQSGCPGQFRTGRVFSLRGAHLVGMFARTGNAQAFRRWVL-DVL 108
>gi|15320799|ref|NP_203309.1| CUN005 putative bro protein, similar to AcMNPV ORF2 [Culex
nigripalpus NPV]
gi|15278261|gb|AAK94083.1|AF403738_5 CUN005 putative bro protein, similar to AcMNPV ORF2 [Culex
nigripalpus NPV]
Length = 580
Score = 61.9 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 27/173 (15%)
Query: 22 QNIWFVAKDVATALGYENSNE-------AINAHCKGVAKRYP----------------LK 58
W VA D+A LGYE + A + P ++
Sbjct: 164 NEPWVVAADLARCLGYEKYRQTHTRILAAFKRKLSDLVHTEPFSGTVESEVARLEGAPVE 223
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP---KLR 115
+ + +++E ++++L+ S LP+ QK++ VF ++LP R G +
Sbjct: 224 LSSRERDIVVVNEGGIHQMLIGSRLPNVQKYKELVFGKILPAARARGELQIGTIGQGDGG 283
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQL-LLKVNRGVTKITGVDQLEAMDIKH 167
A + L+ ++ + EL +++L ++K+ + + + +L+ D++H
Sbjct: 284 AVEPTNQLQSNEKILELELALSRSNSELKVVKLEQLRVQESYESKLKITDMEH 336
>gi|148368874|ref|YP_001257004.1| bro-2 [Spodoptera litura granulovirus]
gi|147883387|gb|ABQ51996.1| bro-2 [Spodoptera litura granulovirus]
Length = 368
Score = 61.5 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGL 138
++S LP+A++F+RW+FEEVLP LRK+G Y + + + V V +
Sbjct: 1 MRSKLPAAEEFQRWLFEEVLPELRKSGKYDMTKRQSVNWAKKYVDVVKSDHKNQLATIRA 60
Query: 139 KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL----NPPQRARF 194
+ LL + + + + M+ K L E N
Sbjct: 61 EHRTELLAYELKLRDVEKCYERQIMEYKQREHEFMLRELKYKTAMEEFQTMANTTLMEFG 120
Query: 195 LNKLLLKRGL 204
+N LL + +
Sbjct: 121 VNALLARDNI 130
>gi|262403516|ref|ZP_06080074.1| prophage antirepressor [Vibrio sp. RC586]
gi|262350020|gb|EEY99155.1| prophage antirepressor [Vibrio sp. RC586]
Length = 265
Score = 61.5 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 9/158 (5%)
Query: 44 INAHCKGVAKRYPLKTEGGI---QKVRIISEPDVYRLLVKSTLPSA-QKFERWVFEEVLP 99
+ R P+ + + I++P + RL + S A +KF+RW++ EV+P
Sbjct: 63 VKDLDDDEFIRIPVAIGSAVFDGEDEIFITQPGLNRL-MGSDKSKAGKKFQRWLYHEVVP 121
Query: 100 TLRKTGSYSVE---APKLRATSASTVLRVHKHLEE-LAKQAGLKDNQLLLKVNRGVTKIT 155
+L+K G Y RA A V + + L + + +Q LK L +K + K
Sbjct: 122 SLQKFGIYPPPLSTNISPRAQLAEVVAQNARALADTIIEQEKLKVEMLNVKNDVSEVKDD 181
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRAR 193
D + + + ++ +T+++ + P
Sbjct: 182 VSDVKSRIQELEMGNINSKHIMTVSEWCKEHYPSLTGE 219
>gi|114679897|ref|YP_758347.1| bro-b [Leucania separata nuclear polyhedrosis virus]
gi|39598628|gb|AAR28814.1| bro-b [Leucania separata nuclear polyhedrosis virus]
Length = 230
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYEN-SNEAINAHCKGVAKRYPLK 58
M+ + F + I + + DQ +W +A+ Y N +N + H +Y
Sbjct: 1 MN-VQKTRFANVDIEIVSTESDQTVWMLAEPFVKLFKYTNSTNRVVGKHVSPKNMKYASD 59
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
E + I+ V LL +S + A++F W+ +LP+L K
Sbjct: 60 DE-RFKNSEFINCTGVLELLCRSRMKYAREFSYWLINVLLPSLCKN 104
>gi|53717779|ref|YP_106765.1| hypothetical protein BPSL0137 [Burkholderia pseudomallei K96243]
gi|72537688|ref|YP_293718.1| hypothetical protein BPSphi5223_0012 [Burkholderia phage phi52237]
gi|167813652|ref|ZP_02445332.1| hypothetical protein Bpse9_00854 [Burkholderia pseudomallei 91]
gi|254183967|ref|ZP_04890558.1| conserved domain protein [Burkholderia pseudomallei 1655]
gi|254188203|ref|ZP_04894715.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|52208193|emb|CAH34124.1| hypothetical phage protein [Burkholderia pseudomallei K96243]
gi|72398378|gb|AAZ72613.1| hypothetical phage protein [Burkholderia phage phi52237]
gi|157935883|gb|EDO91553.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|184214499|gb|EDU11542.1| conserved domain protein [Burkholderia pseudomallei 1655]
Length = 181
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 19/108 (17%)
Query: 2 STITPFE---FESNKIRTIVDKDQNIWFVAKDVATALGYEN--------SNEAINAHCKG 50
+ + FE F+ +VD W +A ALGY + A +
Sbjct: 7 NAVLVFETVEFD------VVDIHNVPWLRGPQIAGALGYNRDDRLADLYARNA-DEFTDE 59
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ + L T GG Q+VRI S Y L + + A+ F WV +VL
Sbjct: 60 MTQLLELDTAGGRQQVRIFSPRGCYLLGMLARTDRAKSFRAWVL-DVL 106
>gi|33331834|gb|AAQ11142.1| BRO-G [Mamestra configurata NPV-A]
Length = 235
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 23 NIWFVAKDVATALGYENSNEAI-------NAHCKGVAKRYPLKTEG----GIQKVRIISE 71
WF AK+ A +GY+ A K + + + +++
Sbjct: 30 EYWFAAKEFARCMGYDKPQAAFEKVNIDYRRKYKELIQPCDIDANNVEFVTHPHTVFVNK 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ +++ K L +A K ++W++EEV P +
Sbjct: 90 AGLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>gi|270643369|ref|ZP_06222159.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270668546|ref|ZP_06222541.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270316667|gb|EFA28462.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317281|gb|EFA28845.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 63
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 74 VYRLLVKSTLPSAQ-----KFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH 126
+Y L+++ + +F +WV EVLP +RKTG Y + T + +
Sbjct: 1 MYTLILRCRDAVKKGSIPHRFRKWVTAEVLPAIRKTGKYESKTTVDDRTGLRNAVNML 58
>gi|319648633|ref|ZP_08002845.1| hypothetical protein HMPREF1012_03884 [Bacillus sp. BT1B_CT2]
gi|317389281|gb|EFV70096.1| hypothetical protein HMPREF1012_03884 [Bacillus sp. BT1B_CT2]
Length = 248
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 51/137 (37%), Gaps = 13/137 (9%)
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
Y +E + + + R +L ++ + L +VN K T D +
Sbjct: 97 YFLELEEKWNSPEMVMKRAMDYLNAQVEKLQTSNLLLEQQVNELKPKATYYDMV------ 150
Query: 167 HLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKM 226
N L++++I + A LNKLL + G+Q + + K +++G
Sbjct: 151 ----LQNKSLLSVSKIAKDYG--MSAIKLNKLLHELGVQYKQ-GDIWLLYAKHQDKGYTQ 203
Query: 227 CDVPMQHVEGSTQQLKW 243
+ + S Q KW
Sbjct: 204 THTHVIDADNSRVQTKW 220
>gi|167855417|ref|ZP_02478183.1| possible prophage antirepressor [Haemophilus parasuis 29755]
gi|167853483|gb|EDS24731.1| possible prophage antirepressor [Haemophilus parasuis 29755]
Length = 267
Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 84/215 (39%), Gaps = 21/215 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+T+T F++ + ++++K+ + + A D+ TAL Y + +AI A +
Sbjct: 1 MTTLT---FQNTTL-SVINKNNHTFLTANDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L+T GG Q+VR+ S + + + + A+ F +WV + + + + E
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLDILDREISQN-----EQQ 111
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH---LP 169
T R + + A Q + + + DQL +H
Sbjct: 112 IAPLTITPEQQRAIQEAVQQAHYRTGLHWQEIYSRLKSTFNVAKYDQLPQTMFEHVINFL 171
Query: 170 SSDNDEYLTITQIGERLNPPQR-ARFLNKLLLKRG 203
++ ++Y I + + + A + K L +
Sbjct: 172 NTLGNQYRPIDRSKKDITITGLDAEQIAKYLARAR 206
>gi|255306547|ref|ZP_05350718.1| hypothetical protein CdifA_08142 [Clostridium difficile ATCC 43255]
Length = 220
Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 22/148 (14%)
Query: 100 TLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ 159
+ K G PKL T + + + + E+ ++ L+ + K D
Sbjct: 58 QVLKNG----PQPKLPTTYKEALQHLIEQV-EVNEKLQLESKMKEKVIKELKPKADYTDM 112
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ N +TITQI + + +NK+L +RG+Q + SG + +
Sbjct: 113 I----------LKNKGLVTITQIAKDYG--MSGKEMNKILHERGIQYKQ-SGQWLLYKQH 159
Query: 220 EERG-GKMCDVPMQHVEGSTQ---QLKW 243
+ +G + + G KW
Sbjct: 160 QGKGYTHSETIDITRSNGMPDVKMTTKW 187
>gi|117530180|ref|YP_851023.1| prophage antirepressor [Microcystis phage Ma-LMM01]
gi|117165792|dbj|BAF36100.1| prophage antirepressor [Microcystis phage Ma-LMM01]
Length = 162
Score = 59.6 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M I + F S +R I+ K + WFV D+ LG N+ EA+N + +
Sbjct: 1 MPNIRTYIFNSTVVRVII-KCKQPWFVKDDILNVLGLRNT-EALNT---KECDTFTINDT 55
Query: 61 GGIQKVRIISEPDVYRLLV----KSTLPSAQKFERWVFEEVL 98
G + + +IS P VYRL+ S + F R V + VL
Sbjct: 56 NGARDIPVISLPAVYRLISMQEDTSKTNNLALFLRHVRDTVL 97
>gi|167951301|ref|ZP_02538375.1| hypothetical protein Epers_35065 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 99
Score = 59.2 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
+++ L +S P A +F +WV EEVLP +R+ G Y + + +++ + L
Sbjct: 1 MHKSLFRSNKPEAIRFTKWVCEEVLPAIRRQGFYGKVTAGQQIALRNQKIKLIEKL 56
>gi|331018931|gb|EGH98987.1| BRO domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 143
Score = 59.2 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
WF +D+A +G + + L ++G QK +IS+ VY LLV +P
Sbjct: 36 WFSLQDMARLMGKALDERSTRKLDSDQHRHVWLHSQGEWQKCLMISDSGVYALLVHHCVP 95
Query: 85 SAQKFERWVFEEVLPTLR 102
+ +W+ EV+PTLR
Sbjct: 96 ENRALRQWLSSEVIPTLR 113
>gi|291484298|dbj|BAI85373.1| hypothetical protein BSNT_02806 [Bacillus subtilis subsp. natto
BEST195]
Length = 254
Score = 59.2 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
T +Y + ++ + + LA K+ LLL+ + K +++L+
Sbjct: 92 TAAYVTKFEEMENKLKPNIPQSLPEALRLAADLAEKNEHLLLENAQ---KNQMINELQPK 148
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ N L+I++I + +NKLL + G+Q + + K ++G
Sbjct: 149 ASYYDLVLQNKSLLSISKIAKDYG--MSGTKMNKLLHELGIQFKQ-GDCWLLYQKYADKG 205
>gi|266620995|ref|ZP_06113930.1| KilA protein, putative phage-related DNA binding protein
[Clostridium hathewayi DSM 13479]
gi|323485187|ref|ZP_08090538.1| hypothetical protein HMPREF9474_02289 [Clostridium symbiosum
WAL-14163]
gi|288867311|gb|EFC99609.1| KilA protein, putative phage-related DNA binding protein
[Clostridium hathewayi DSM 13479]
gi|323401506|gb|EGA93853.1| hypothetical protein HMPREF9474_02289 [Clostridium symbiosum
WAL-14163]
Length = 157
Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYE--NSNEAINAHCKGVAKRYPLKTEGGIQK 65
F ++ D D F AKD++ A+GY N + + + PL G +
Sbjct: 12 SFGGKRLNVYGDLD-APLFKAKDISHAIGYSSGNEWRMLEMCEEDEKLKLPLVVAGQRRS 70
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
V ++E +Y +L +S + A+ + R V +E++ +RK ++ A +
Sbjct: 71 VNFVTENGLYNILAQSRMEIARSWRRVVHDELI-NMRKEKGRNIAEQFEEWDHAMDNIYF 129
Query: 126 HKHLEELAKQAGL 138
+ +L + +
Sbjct: 130 DEETGQLMQSVTV 142
>gi|31544005|ref|NP_852730.1| hypothetical protein Aaphi23p08 [Haemophilus phage Aaphi23]
gi|31408049|emb|CAD90783.1| hypothetical protein [Haemophilus phage Aaphi23]
Length = 218
Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/216 (18%), Positives = 86/216 (39%), Gaps = 36/216 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKRYP 56
M+T+T F+S + + + ++ IW ++ ALGY + +++ H +
Sbjct: 1 MTTLT---FQSTTL-SAIHQNNQIWLTVTEIGKALGYSDPFKSVKNIYDRHADEFTPQMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV-----------LPTL 101
++T GGIQKVRI S + + + S A+ F RWV + + LP
Sbjct: 57 ALIDMRTNGGIQKVRIFSLRGAHLIGMLSHTKVAKDFRRWVLDILDREAQQPKQLALPQP 116
Query: 102 RKTGSYSVEAPKLRATS-----------ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRG 150
KT Y+V + + + + ++ L + + ++ ++
Sbjct: 117 EKT--YTVTLTEYELQTVAWACFAFRRNNNLLHELYSPLAAIGSKFAVEARDNAVEYRNT 174
Query: 151 VTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERL 186
+ + V + +DI+ P ++ I E++
Sbjct: 175 LRRFNEVVKRITVDIEADPETNWRVLKHIRSFNEKI 210
>gi|77460517|ref|YP_350024.1| BRO-like [Pseudomonas fluorescens Pf0-1]
gi|77384520|gb|ABA76033.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 176
Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF A+DV +G+ +N K + ++ +K ++SE VY LLV
Sbjct: 25 QTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIEYFRQPEKQLMLSESGVYALLVYHY 84
Query: 83 LPSAQKFERWVFEEVLPTLR 102
+P + W+ +V+P LR
Sbjct: 85 VPGNRLLREWLTLQVVPALR 104
>gi|189023514|ref|YP_001934282.1| BRO family protein [Brucella abortus S19]
gi|189019086|gb|ACD71808.1| BRO family protein [Brucella abortus S19]
Length = 53
Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
++S P A+KF+ WV + VLP +RK G Y K+ A
Sbjct: 1 MRSRKPEAKKFQNWVTQVVLPAIRKDGMYVRGEEKVSAGEMD 42
>gi|330985976|gb|EGH84079.1| BRO domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 179
Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R +V WF +D+A +G + L T+G QK +ISE
Sbjct: 26 LRAVVMHA-EAWFPLEDIARLMGKRLDERNTRKLDADQRRTAWLLTQGEWQKCLLISESA 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
V+ LL+ +P + RW+ ++VLP L
Sbjct: 85 VFALLIHHYIPENRALRRWLTQDVLPAL 112
>gi|71901657|ref|ZP_00683734.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728561|gb|EAO30715.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 116
Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 86 AQKFERWVFE--EVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGL-KDNQ 142
A F RWV + EVLP++RKTGSYS + + + + H ++L + + + K Q
Sbjct: 4 AAAFRRWVLDVLEVLPSIRKTGSYSTTGTMVNDDALCAIWFLCDHFKKLHEMSRVNKVPQ 63
Query: 143 LLLKVNRGVTKITG 156
L G T+I+G
Sbjct: 64 ALY--WLGATEISG 75
>gi|71735908|ref|YP_274685.1| BRO domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71556461|gb|AAZ35672.1| BRO family, N-terminal domain protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320324473|gb|EFW80550.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328406|gb|EFW84409.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 179
Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R +V WF +D+A +G + L T G QK +ISE
Sbjct: 26 LRAVVMHA-EAWFPLEDIARLMGKRLDERNTRKLDADQRRTAWLLTHGEWQKCLLISESA 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
V+ LL+ +P + RW+ ++VLP L
Sbjct: 85 VFALLIHHYIPENRALRRWLTQDVLPAL 112
>gi|289624292|ref|ZP_06457246.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289646581|ref|ZP_06477924.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|298487062|ref|ZP_07005113.1| BRO family, N-terminal domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298158415|gb|EFH99484.1| BRO family, N-terminal domain protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330870140|gb|EGH04849.1| BRO domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 179
Score = 58.8 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R +V WF +D+A +G + L T G QK +ISE
Sbjct: 26 LRAVVMHA-EAWFPLEDIARLMGKRLDERNTRKLDADQRRTAWLLTHGEWQKCLLISESA 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
V+ LL+ +P + RW+ ++VLP L
Sbjct: 85 VFALLIHHYIPENRALRRWLTQDVLPAL 112
>gi|257488032|ref|ZP_05642073.1| BRO domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331008703|gb|EGH88759.1| BRO domain-containing protein [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 179
Score = 58.8 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R +V WF +D+A +G + L T G QK +ISE
Sbjct: 26 LRAVVMHA-EAWFPLEDIARLMGKRLDERNTRKLDADQRRTAWLLTHGEWQKCLLISESA 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
V+ LL+ +P + RW+ ++VLP L
Sbjct: 85 VFALLIHHYIPENRALRRWLTQDVLPAL 112
>gi|147672232|ref|YP_001215895.1| BRO domain-containing protein [Vibrio cholerae O395]
gi|262167849|ref|ZP_06035550.1| bRO family N- domain protein [Vibrio cholerae RC27]
gi|25807832|gb|AAN74016.1| ORF14c [Vibrio phage O395]
gi|146314615|gb|ABQ19155.1| BRO family, N- domain protein [Vibrio cholerae O395]
gi|227014843|gb|ACP11052.1| BRO-N domain-containing protein [Vibrio cholerae O395]
gi|262023757|gb|EEY42457.1| bRO family N- domain protein [Vibrio cholerae RC27]
Length = 225
Score = 58.8 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 1 MSTITPFE---FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA---HCKGV--- 51
M+++ F+ F+ +V+++ ++ A + TALGY + A+ K
Sbjct: 1 MTSVLTFQDTHFD------VVERNNQLYLDAYQIGTALGYSDPRTAVRKIFNRNKDEFSS 54
Query: 52 --AKRYPLKTEGGIQK-VRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
++ L T G QK VRI S + + + + A++F +WV +
Sbjct: 55 GMSEVINLMTSGNYQKSVRIFSLRGAHLIAMFARTAIAKQFRKWVLD 101
>gi|330891087|gb|EGH23748.1| BRO domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 179
Score = 58.8 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
+R +V WF +D+A +G + L T G QK +ISE
Sbjct: 26 LRAVVMHA-EAWFPLEDIARLMGKRLDERNTRKLDADQRRTAWLLTHGEWQKCLLISESA 84
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVLPTL 101
V+ LL+ +P + RW+ ++VLP L
Sbjct: 85 VFALLIHHYIPENRALRRWLTQDVLPAL 112
>gi|289651265|ref|ZP_06482608.1| hypothetical protein Psyrpa2_26530 [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 170
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL L S +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTVLHDQQSVTLDNPRM 125
>gi|164519296|ref|YP_001649083.1| BRO-E [Helicoverpa armigera granulovirus]
gi|163869482|gb|ABY47792.1| BRO-E [Helicoverpa armigera granulovirus]
Length = 259
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKD-- 140
+P+A++F+ W E+LPTL + G YS+ A A A+ + VH + A+ LKD
Sbjct: 1 MPAAKRFKSWNTNELLPTLCQDGKYSM-ATDAPADIAAGMNAVHAASNDGAEAPWLKDLT 59
Query: 141 --NQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNK 197
Q+++K + + ++ + + + S+ N I N Q +N+
Sbjct: 60 ELKQIIVKKDEMIA--VKNEENKKLTVALQESNQNLSVANAALISLSQNMSQALVMVNE 116
>gi|153212070|ref|ZP_01947887.1| BRO family, N- domain protein [Vibrio cholerae 1587]
gi|124116866|gb|EAY35686.1| BRO family, N- domain protein [Vibrio cholerae 1587]
Length = 260
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-------GVAK 53
MS F+ T ++K+ +W A D+A ALGY++ N + + G+++
Sbjct: 1 MSNQLTFQ---GVYLTPIEKEAQLWLSASDIANALGYKSPKSISNIYARYSDEFSSGMSE 57
Query: 54 RYPLKTEGGIQK-VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L T G QK VRI S + + + S A++F +WV + + + P
Sbjct: 58 VINLMTSGNYQKSVRIFSLRGAHLIAMFSRTSIAKEFRKWVLDVLDKQI------ETAQP 111
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
+ +++ L + K + + A G ++ + + D L++ + +
Sbjct: 112 QPLTLTSAQKLEIRKAVGKKALNDGESHKRVYHALYDHFSVSEYGDILQSQFDEAI 167
>gi|255306541|ref|ZP_05350712.1| hypothetical protein CdifA_08112 [Clostridium difficile ATCC 43255]
Length = 224
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG Y+ + ++ + ++ +E + + G K + +L+
Sbjct: 98 TGIYTKKFEEMEQVLKNEQTKLPTTYKEALQHLIEQVEVNEQLQLEGKMKDQVIKELKPK 157
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
N +TITQI + + +NK+L +RG+Q + SG + + + G
Sbjct: 158 ADYTDMILKNKGLVTITQIAKDYG--MSGKEMNKILHERGIQYKQ-SGQWLLYKQHQGEG 214
>gi|330942408|gb|EGH45019.1| hypothetical protein PSYPI_22792 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 191
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 PELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 119
>gi|20070002|ref|NP_613206.1| BRO-g [Mamestra configurata NPV-A]
gi|20043396|gb|AAM09231.1| BRO-g [Mamestra configurata NPV-A]
Length = 235
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 23 NIWFVAKDVATALGYENSNEA---INAHCKGVAKRYPLKTEGGIQKVRII--------SE 71
WF AK+ A +GY+ A +N + K + V + ++
Sbjct: 30 EYWFAAKEFARCMGYDKPQAAFEKVNIDYRRKYKELIQPCDIDANNVEFVTHPHTVSVNK 89
Query: 72 PDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ +++ K L +A K ++W++EEV P +
Sbjct: 90 AGLVQMITKCKLKNADKLQKWLYEEVFPKI 119
>gi|18138387|ref|NP_542683.1| BRO-A [Helicoverpa zea SNPV]
gi|18028769|gb|AAL56205.1|AF334030_130 ORF60 [Helicoverpa zea SNPV]
Length = 211
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 28 AKDVATALGYENSNEAINAHC-----KGVAKRYPLKTEGGIQ-KVRIISEPDVYRLLVKS 81
A A L Y N+ AI K + K T +Q K + I++ + L++ S
Sbjct: 3 ANPFARILEYSNAPNAITKFVSHKNQKCLEKLNIKMTSSYVQAKSKFINKTGLLELVINS 62
Query: 82 TLPSAQKFERWVFEEVLPTL 101
+ A +F W E+ P+L
Sbjct: 63 KMRFAAEFRYWFVNELFPSL 82
>gi|292397743|ref|YP_003517809.1| BRO-E [Lymantria xylina MNPV]
gi|291065460|gb|ADD73778.1| BRO-E [Lymantria xylina MNPV]
Length = 196
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSN---EAINAHCKGVAKR-------------YPLKTE 60
IV D ++ K++A LGY + + I K K P T
Sbjct: 71 IVMPDGSVAVKLKELALFLGYADVKMSYKLIPEEWKITWKNLQNELVSKRRQLVAPSTTP 130
Query: 61 GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
Q ++ + EP VY L+ +S P A++ V+E +LPT+RKTG +
Sbjct: 131 ANWQPEILFVLEPGVYALMARSNKPMAKEKMNHVYETILPTIRKTGKF 178
>gi|165969071|ref|YP_001650971.1| baculovirus repeated ORF d [Orgyia leucostigma NPV]
gi|164663567|gb|ABY65787.1| baculovirus repeated ORF d [Orgyia leucostigma NPV]
Length = 427
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 88/264 (33%), Gaps = 33/264 (12%)
Query: 5 TPFEFESNKI-RTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-------------- 49
+ F F + + ++ + FVAK +A L + + + A++
Sbjct: 10 SAFTFNDKTLHFKYLIRNGEVLFVAKTIAKNLMFTDCDRAVSNVVDKKYKFVYGQLITSA 69
Query: 50 --GVAKRYPLKTEGG---IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
GV K+ + +I + +L+ K + + W+ E V+P++ T
Sbjct: 70 SVGVNKKKSIDESDPLYLHPNAVLIDKKGAVQLISKCKFADVVELQVWLLETVIPSILCT 129
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMD 164
S + + +++ + ++ L + V K ++Q+
Sbjct: 130 NVDSCVSSLPPPPLPNKNVKIDNSGNNNNLNLKNIEEKINLLESALVQKDELINQI---- 185
Query: 165 IKHLPSSDNDEYLTITQIGERLN------PPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
+ S D I I ++ N + + +N+++ +
Sbjct: 186 ---IESKDRQRDEIINVIVDKNNCRIDAVVASKDKQINRVMNDLNRMYNGFQDTLCQKND 242
Query: 219 GEERGGKMCDVPMQHVEGSTQQLK 242
+ +M DV Q +E + +K
Sbjct: 243 LLKHTIEMLDVKEQMMERAMDMVK 266
>gi|69245158|ref|ZP_00603282.1| BRO, N-terminal [Enterococcus faecium DO]
gi|293560117|ref|ZP_06676621.1| phage antirepressor protein [Enterococcus faecium E1162]
gi|314938181|ref|ZP_07845486.1| BRO family protein [Enterococcus faecium TX0133a04]
gi|314943775|ref|ZP_07850510.1| BRO family protein [Enterococcus faecium TX0133C]
gi|314951144|ref|ZP_07854202.1| BRO family protein [Enterococcus faecium TX0133A]
gi|314994618|ref|ZP_07859878.1| BRO family protein [Enterococcus faecium TX0133B]
gi|314995572|ref|ZP_07860666.1| BRO family protein [Enterococcus faecium TX0133a01]
gi|68196001|gb|EAN10434.1| BRO, N-terminal [Enterococcus faecium DO]
gi|291605984|gb|EFF35414.1| phage antirepressor protein [Enterococcus faecium E1162]
gi|313590160|gb|EFR69005.1| BRO family protein [Enterococcus faecium TX0133a01]
gi|313591023|gb|EFR69868.1| BRO family protein [Enterococcus faecium TX0133B]
gi|313596623|gb|EFR75468.1| BRO family protein [Enterococcus faecium TX0133A]
gi|313597499|gb|EFR76344.1| BRO family protein [Enterococcus faecium TX0133C]
gi|313642528|gb|EFS07108.1| BRO family protein [Enterococcus faecium TX0133a04]
Length = 79
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK-GVAKRYPLKTEGGIQKVR 67
+ + IR + D + W VAKDVA ALG + AI++ K GV + + G Q V
Sbjct: 6 WNGHIIRFV-DINDEWWAVAKDVAEALGLKQVTRAIHSLPKDGVTTSKVIDSLGRTQDVN 64
Query: 68 IISEP 72
II+E
Sbjct: 65 IINEK 69
>gi|71276702|ref|ZP_00652971.1| phage-related protein [Xylella fastidiosa Dixon]
gi|71162494|gb|EAO12227.1| phage-related protein [Xylella fastidiosa Dixon]
Length = 297
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------ 53
M+ + + F + +I+D+D + A+++A ALGY + + + + +
Sbjct: 97 MTQLPSAVCFSGKSL-SIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMT 155
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV----LPTLRKTG 105
L T G + R+ S + + + + A F RWV + + LP TG
Sbjct: 156 TVVNLTTVTGDKPTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEGLALPQHSTTG 212
>gi|300724094|ref|YP_003713411.1| hypothetical protein XNC1_3241 [Xenorhabdus nematophila ATCC 19061]
gi|297630628|emb|CBJ91293.1| hypothetical protein XNC1_3241 [Xenorhabdus nematophila ATCC 19061]
Length = 134
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 74 VYRLLVKSTLPSA-----QKFERWVFEEVLPTLRKTGSY 107
+Y L+++ +F +WV EVLP +RKTGSY
Sbjct: 1 MYFLVIRCRDAVRRGTLPHRFRKWVTSEVLPAIRKTGSY 39
>gi|291546894|emb|CBL20002.1| Prophage antirepressor [Ruminococcus sp. SR1/5]
Length = 80
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 42 EAINAHCKGVAKRYPLKTEG---GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
A++ K PL Q+ ++E +Y +L++S P A++F++ V +++L
Sbjct: 3 RAVDNDEKIKITNPPLNERTLLKPNQEYWFLTEDGLYEVLMQSRKPKAKEFKKEV-KKIL 61
Query: 99 PTLRKTGSYSV 109
++RKTG Y V
Sbjct: 62 KSIRKTGGYVV 72
>gi|58040863|ref|YP_192827.1| hypothetical protein GOX2440 [Gluconobacter oxydans 621H]
gi|58003277|gb|AAW62171.1| Hypothetical protein GOX2440 [Gluconobacter oxydans 621H]
Length = 284
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG++ + + + + + K+ G++ Q +K + V + GVD +
Sbjct: 111 TGTHLATSVIDHSMLLRKAIALQGSMLAYNKRQGMEVTQARIKADAQVLEKMGVDLRKEC 170
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPP--QRARFLNKLLLKRGLQ--VSKVSGG--YRPTP 217
+ P + ++ LT T I + L+ P + N LL GL G + PT
Sbjct: 171 GWQSQPLAVQEKVLTATDIAKALSLPGNKPGEAGNNLLDAAGLYSWTRDTRGRKVWTPTE 230
Query: 218 KGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
G + G + D P H G+ Q W ++L
Sbjct: 231 HGRKFG-RYEDKPRAHALGTVQPWGWYPSVLDVL 263
>gi|322420406|ref|YP_004199629.1| BRO domain-containing protein [Geobacter sp. M18]
gi|320126793|gb|ADW14353.1| BRO domain protein [Geobacter sp. M18]
Length = 115
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVD--KDQNIWFVAKDVATALGYENSNEAINA--------HCKG 50
M+ + F +TI W++A+D+ LG N + A+N
Sbjct: 1 MTKLCIALFGYANAQTITTRPIAGAKWYMAQDICRLLGISNYSNAVNKPFRDQTFTLIDA 60
Query: 51 VAKRYPLKTEGG--IQKVRIISEPDVYRLLVKSTLPSAQKFER 91
+ Y T G +++ +++ +Y+L++++ A + +
Sbjct: 61 ERRYYSTSTSPGTSKRRLLMVNTSGLYKLIMQADPQVAGEIQE 103
>gi|71901934|ref|ZP_00683988.1| phage-related protein [Xylella fastidiosa Ann-1]
gi|71728294|gb|EAO30471.1| phage-related protein [Xylella fastidiosa Ann-1]
Length = 201
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 1 MSTI-TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------ 53
M+ + + F + +I+D+D + A+++A ALGY + + + + +
Sbjct: 1 MTQLPSAVCFSGKSL-SIIDRDGTPYLSARELARALGYADERSVLRIYARRTDEFTEQMT 59
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV----LPTLRKTG 105
L T G + R+ S + + + + A F RWV + + LP TG
Sbjct: 60 TVVNLTTVTGDKPTRLFSPRGCHLVAMFARTSVAAAFRRWVLDVLEGLALPQHSTTG 116
>gi|211731843|gb|ACJ10146.1| conserved hypothetical protein [Bacteriophage APSE-5]
Length = 258
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 84/224 (37%), Gaps = 32/224 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T+ F + + TI ++ I F + ++A AL Y+ +AI + +
Sbjct: 1 MNTLI---FRNTILETI-SRNGEIRFTSAEIARALQYKKI-DAITQIYARNLDEFTSQMS 55
Query: 57 ---------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL--PTLRKTG 105
+ + VRI S + + + + P A++F +WV ++L TL +T
Sbjct: 56 MTLNLRVNGINNSLREKVVRIFSLRGAHLIAMFANTPVAKEFRKWVL-DILDKQTLNQT- 113
Query: 106 SYSVEAPKLRATSASTV----LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
P+ + +A R HL + V + ++TG E
Sbjct: 114 --VKPNPQYHSKAAERFTHSDTRNLTHLVWCMTNGFRFEQSWTRAVWLALREVTGTPPPE 171
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLNPPQRARF---LNKLLLKR 202
I+H+P DE I I E L + +LL KR
Sbjct: 172 RFQIEHIPLM-ADECRRIYYITETLRQIINDAEKQTIKRLLRKR 214
>gi|289677016|ref|ZP_06497906.1| hypothetical protein PsyrpsF_27278 [Pseudomonas syringae pv.
syringae FF5]
Length = 183
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
I+SE Y ++V + +W+ EV+P LR
Sbjct: 82 SELIVSESGAYAMMVHHYHAENRGLRQWLTHEVVPALR 119
>gi|59712610|ref|YP_205386.1| hypothetical protein VF_2003 [Vibrio fischeri ES114]
gi|59480711|gb|AAW86498.1| hypothetical protein VF_2003 [Vibrio fischeri ES114]
Length = 182
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCKGVAKRYP 56
M+ F+ + ++++ IW A + ALGY++++ A+N + +
Sbjct: 1 MTNQLTFQNTHFNL---IEQNNKIWLSASQIGAALGYKDTS-ALNRIYARNIDEFSSSMS 56
Query: 57 -----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
G Q RI S + L + S A++F +WV +VL
Sbjct: 57 GSVKLTDPRGVEQNARIFSLRGAHLLAMFSRTNKAKEFRKWVL-DVL 102
>gi|219871332|ref|YP_002475707.1| putative prophage antirepressor [Haemophilus parasuis SH0165]
gi|219691536|gb|ACL32759.1| possible prophage antirepressor [Haemophilus parasuis SH0165]
Length = 267
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+T+T F++ + ++++K+ + + A D+ TAL Y + +AI A +
Sbjct: 1 MTTLT---FQNTTL-SVINKNNHTFLTANDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
L+T GG Q+VR+ S + + + + A+ F +WV + + +
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD-----ILDR---EISQN 108
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
+ + + + ++E +QA + ++ + V LP +
Sbjct: 109 EQQIAPLTITPEQQRAIQEAVQQAHYRTGLHWQEIYSRLKSTFNV-----AKYDQLPQTM 163
Query: 173 NDEYLT-ITQIGERLNPPQRAR 193
+ + + +G + P R++
Sbjct: 164 FERVINFLNTLGNQYRPIDRSK 185
>gi|320540204|ref|ZP_08039859.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
gi|320029870|gb|EFW11894.1| putative phage anti-repressor protein [Serratia symbiotica str.
Tucson]
Length = 248
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+T F+ + + +V + WF A +A AL Y ++ + + + + + P
Sbjct: 1 MNTQLIFK---SYVLEVVKHEGKSWFTATTLAIALEYSDTRKVTHLYNRNSDEFTPGMSE 57
Query: 57 ---LKTEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
T G +Q RI S + + + ++ P A++F +WV +
Sbjct: 58 VLKSSTSGNLQVSRRIFSLRGAHLIAMFASTPVAKEFRKWVLD 100
>gi|77457267|ref|YP_346772.1| hypothetical protein Pfl01_1040 [Pseudomonas fluorescens Pf0-1]
gi|77381270|gb|ABA72783.1| putative BRO-like protein [Pseudomonas fluorescens Pf0-1]
Length = 170
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 21 DQNIWFVAKDVATALGYE-NSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
D WF A+D+ +G+ N + + L G + + ++SE ++ LLV
Sbjct: 33 DHQAWFCAQDLGRMMGHPLNPRVTLK-LDPDQRRTVRLSKYGKVVETPMVSESGMFALLV 91
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+P + +W+ EV+P LR+T S + E
Sbjct: 92 HHFIPENRNLRQWLSNEVIPILRETSSVTAE 122
>gi|66046954|ref|YP_236795.1| hypothetical protein Psyr_3726 [Pseudomonas syringae pv. syringae
B728a]
gi|63257661|gb|AAY38757.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
Length = 191
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ +DQ WF A+D+ +G+ + + + L G +
Sbjct: 23 TPFHRHNRQLLALLLEDQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAR 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 SELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 119
>gi|302184866|ref|ZP_07261539.1| hypothetical protein Psyrps6_00942 [Pseudomonas syringae pv.
syringae 642]
Length = 194
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 26 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHQMITLDLHGEAQ 84
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 85 SELMVSESGAYAMMVHHYHAENRGLRQWITHEVVPALR 122
>gi|299530349|ref|ZP_07043774.1| hypothetical protein CTS44_06223 [Comamonas testosteroni S44]
gi|298721720|gb|EFI62652.1| hypothetical protein CTS44_06223 [Comamonas testosteroni S44]
Length = 238
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 29/196 (14%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA----HCKGVAKRYP- 56
+ IT F +V++ W A ++ ALGY + ++A+ H
Sbjct: 25 NNIT-FN--------VVERTGKAWLKAVEIGRALGYVD-DKAVQRIYARHADEFTSEMTG 74
Query: 57 ---LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPK 113
L T G Q R+ S + L + + A+ F +WV + + +++ +
Sbjct: 75 VVNLTTPSGKQDARVFSLRGAHLLAMFARTKVAKDFRKWVLDVLDREVQR---------Q 125
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
+ A T L + + + +L+ + ++ + ++ + +P
Sbjct: 126 AQMQGADTALTLARDGAFAGLVIAAR-RKLVTALADFERQMAVWEIVDEEADRSMPVPQM 184
Query: 174 DEYLT-ITQIGERLNP 188
E T + ++G+ +P
Sbjct: 185 QEISTRLERLGKLFHP 200
>gi|330977912|gb|EGH77815.1| hypothetical protein PSYAP_14210 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 181
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 13 KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEP 72
+RTI + Q WF D+A +G A + L+ G Q+ +ISE
Sbjct: 25 TLRTIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQRQLMISES 83
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 84 GVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|18309125|ref|NP_561059.1| hypothetical protein CPE0143 [Clostridium perfringens str. 13]
gi|18143800|dbj|BAB79849.1| phage-related hypothetical protein [Clostridium perfringens str.
13]
Length = 119
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
+ K+ I E +Y + S LP F +W+ EVLP LR G+YS+ +
Sbjct: 6 ISYLKQTPKLVIFYEEGLYGFINYSKLPIGISFRKWLRREVLPELRAKGTYSINKESYKD 65
Query: 117 TSASTVLRVHKHLEE 131
+ ++++
Sbjct: 66 NLKDENENLSLYIQD 80
>gi|320006297|gb|ADW01326.1| phage-related antirepressor [Lactobacillus phage Sha1]
Length = 236
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%)
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVT-KITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
L+ K E+ +Q + L + R + + L+ N TI+
Sbjct: 89 LQYIKAFNEMEQQVKFQVPSTLPEALRLAADQAEKISVLKPKADYTDSMLANKGLETISI 148
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGSTQ- 239
I + R NKLL G+Q + + K ++ G + + +G Q
Sbjct: 149 IAKNYGY--STREFNKLLHGLGIQYKQ-GKTWLLYAKYQDEGYTHVEPYEYTNSDGIKQV 205
Query: 240 --QLKW 243
+KW
Sbjct: 206 RNTMKW 211
>gi|298487936|ref|ZP_07005975.1| Prophage antirepressor [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298157487|gb|EFH98568.1| Prophage antirepressor [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 191
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 PELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|257485939|ref|ZP_05639980.1| hypothetical protein PsyrptA_21901 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331010337|gb|EGH90393.1| hypothetical protein PSYTB_11708 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 191
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 PELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|66047047|ref|YP_236888.1| hypothetical protein Psyr_3820 [Pseudomonas syringae pv. syringae
B728a]
gi|63257754|gb|AAY38850.1| conserved domain protein [Pseudomonas syringae pv. syringae B728a]
gi|330971039|gb|EGH71105.1| hypothetical protein PSYAR_11124 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 181
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I + Q WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|254701082|ref|ZP_05162910.1| hypothetical protein Bsuib55_09524 [Brucella suis bv. 5 str. 513]
Length = 95
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLP 99
V +ISE +Y+L++KS AQKF+ W+ +V+P
Sbjct: 51 VSLISEAGLYKLILKSRKKEAQKFQNWLARDVIP 84
>gi|29832083|ref|NP_826717.1| hypothetical protein SAV_5540 [Streptomyces avermitilis MA-4680]
gi|29609201|dbj|BAC73252.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 286
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 13/141 (9%)
Query: 27 VAKDVATALGYE-NSNEAINAHCKGVAKRYPL-------KTEGGIQKVRIISEPDVYRLL 78
VA D+ A+ Y+ ++ I + KG L T GG+Q +++I + + L+
Sbjct: 36 VAADLGKAIDYKADAESFIRSLVKGPGDSRTLYVGNELIPTAGGLQTMKVIYKRGAFHLM 95
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTG-SYSVEAPKLRATSASTVLRVHKHLEELAKQAG 137
++S LP A ++ VF ++L + + G + AP + + + V + ++EL + A
Sbjct: 96 MRSNLPKAAEYRDQVF-DLLEQIEREGFVVNASAPVEQLKTMKPL--VEQTIDELLE-AR 151
Query: 138 LKDNQLLLKVNRGVTKITGVD 158
L++ + + R V G D
Sbjct: 152 LQERKDYRSIIRAVRDAGGQD 172
>gi|307154374|ref|YP_003889758.1| BRO domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984602|gb|ADN16483.1| BRO domain-containing protein [Cyanothece sp. PCC 7822]
Length = 48
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN 45
MS +T F FE ++R + D+ W +A+DV LG E + +
Sbjct: 1 MSNLTIFTFEEQQVRFVGTADKPEW-IAQDVCDVLGIELAANVLQ 44
>gi|240948754|ref|ZP_04753126.1| possible prophage antirepressor [Actinobacillus minor NM305]
gi|240296970|gb|EER47548.1| possible prophage antirepressor [Actinobacillus minor NM305]
Length = 209
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP---- 56
M+T+T F++ + ++++K+ + + A D+ TAL Y + +AI A +
Sbjct: 1 MTTLT---FQNTTL-SVINKNNHTFLTASDLGTALEYADPTKAIVKIYDRNADEFTAEMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L+T GG Q+VR+ S + + + + A+ F +WV +
Sbjct: 57 ALIELQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD 99
>gi|261418075|ref|YP_003251757.1| phage regulatory protein, Rha family [Geobacillus sp. Y412MC61]
gi|319767966|ref|YP_004133467.1| phage regulatory protein, Rha family [Geobacillus sp. Y412MC52]
gi|261374532|gb|ACX77275.1| phage regulatory protein, Rha family [Geobacillus sp. Y412MC61]
gi|317112832|gb|ADU95324.1| phage regulatory protein, Rha family [Geobacillus sp. Y412MC52]
Length = 259
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
T A +L + + E ++ + + + ++QLE K + +
Sbjct: 126 TQAEMLLLYAQQMVEQERKIKALEE-------DNARQNSRIEQLENKIEKRMTEEFEMQL 178
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQ-HVE 235
+T TQIG+ P + +NKLL K GLQ V G + T +G++ P+Q
Sbjct: 179 VTPTQIGKMFEPALSGKEVNKLLQKAGLQWR-VGGEWVATVEGKKYSSSE---PIQLESG 234
Query: 236 GSTQQLKWNSNLLVSFLQNEL 256
QLKW + +Q E+
Sbjct: 235 KMVYQLKWQRRVKD-IIQAEM 254
>gi|297158732|gb|ADI08444.1| DNA-binding protein [Streptomyces bingchenggensis BCW-1]
Length = 284
Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+ ++S + RL+ P + F+ WV E V+ ++++ GSY ++ +++ T+
Sbjct: 1 MVMMSLNGLIRLINGCVKPECEPFKNWVTEVVV-SIQRHGSYELKKAEVQPTTPDAPTAY 59
Query: 126 H--KHLEEL-----AKQAGLKDNQLLLKVNRGVTKITGVDQLEAM-DIKHLPSSDNDEYL 177
K + + + L ++ + V+ + + + + E L
Sbjct: 60 AMPKEVADAIVRLEEHNLDMDAQMLAMQREAQELRRESVEMMRKSAEAQQEVAKTQREAL 119
Query: 178 TITQIGER 185
+ +R
Sbjct: 120 EAQREAQR 127
>gi|289676893|ref|ZP_06497783.1| hypothetical protein PsyrpsF_26663 [Pseudomonas syringae pv.
syringae FF5]
Length = 181
Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
F S +R I + Q WF D+A +G A + L+ G Q
Sbjct: 17 ILFLRHSRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|28868858|ref|NP_791477.1| hypothetical protein PSPTO_1652 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852097|gb|AAO55172.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 191
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF+ + ++ ++ ++Q WF A+D+ +G+ + + + L G +
Sbjct: 23 TPFQRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDTDQHRMITLDLHGEAE 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 PELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|167465093|ref|ZP_02330182.1| hypothetical protein Plarl_21461 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 245
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMD 164
Y ++ + + + R H++LE+ K A L ++L+L +VN K + D +
Sbjct: 94 YFLDLERKWNSPEMVIKRAHEYLEQ--KVAALTTDKLVLTQQVNELQPKASYYDTV---- 147
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGG 224
N L++T+I + A+ LN+ L + G+Q + + K +++G
Sbjct: 148 ------LQNKSLLSVTKIAKDYG--MSAKALNQKLHELGVQFKQ-GDIWLLYAKYQDKGY 198
Query: 225 KMCDVPMQHVEGSTQQLKW 243
+ E S KW
Sbjct: 199 TQTTTHVIDAEKSKVNTKW 217
>gi|261492288|ref|ZP_05988851.1| BRO family, N- domain protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261312067|gb|EEY13207.1| BRO family, N- domain protein [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 259
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 25/174 (14%)
Query: 28 AKDVATALGYENSNEAINAHCKGVAKRYP--------LKTEGGIQKVRIISEPDVYRLLV 79
A +V ALGY+N + I+ + + + T G+QKVRI S + L +
Sbjct: 3 ALEVGRALGYKNPSSDISKLYERNKDEFTPSMTAIIDMDTASGMQKVRISSLRGCWLLGM 62
Query: 80 KSTLPSAQKFERWVFE----EVL-----------PTLRKTGSYSVEAPKLRATSASTVLR 124
+S A+ F +WV + EVL PT+ ++ ++AT T L
Sbjct: 63 RSHTKVAKDFRKWVLDILDKEVLQNNQQIAPLAEPTITAE-EQNMLQNAVKATHERTKLS 121
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+ + + + + + K + + V ++ I + N ++
Sbjct: 122 YGEIWARTKNKFRVAEYKQI-KCSDLRDALIYVASMQPACIDRPRQTINVDWFN 174
>gi|213970390|ref|ZP_03398519.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213924861|gb|EEB58427.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 214
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 50 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 108
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +ISE LLV +P ++ +W+ EVL
Sbjct: 109 RQLMISESGTLALLVHHYVPESRALRQWLTHEVL 142
>gi|3510491|gb|AAC33829.1| orf6 [Heliothis armigera entomopoxvirus 'L']
Length = 286
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 31/199 (15%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVA-TALGYENSNE--AINAHCKGVAKR--------- 54
F++++ I + D + WF K++ L Y + + +
Sbjct: 4 FKYKNINIDVLGDIN-YPWFNGKNILIDGLQYTEQSAKCVLKRLESKFKNKLSDIICVGG 62
Query: 55 ----------YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK- 103
T K I+E +Y +++ T SA+ F+ ++ ++LP++RK
Sbjct: 63 NLPPTGNLDKISNITRHNDGKAIYINEAGLYYIIIHCTKESAKPFQDYILFDLLPSIRKL 122
Query: 104 -TGSYSVEAPKLRATSASTVLRVHKHLEELAKQ--AGLKDNQLLLKVNRGVTKITGVDQL 160
Y + + + + LEE+ Q ++ N LL+ N+ +
Sbjct: 123 AQKKYL----DIINNKQDKIDILTQDLEEIKNQNILTIEQNNKLLQQNQLALNKLQELGI 178
Query: 161 EAMDIKHLPSSDNDEYLTI 179
++ K S N+ TI
Sbjct: 179 NLIESKEEIKSINNRIDTI 197
>gi|145632039|ref|ZP_01787784.1| possible prophage antirepressor [Haemophilus influenzae R3021]
gi|144982291|gb|EDJ89890.1| possible prophage antirepressor [Haemophilus influenzae R3021]
Length = 119
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAH----CKGVAKRYP 56
M+T+T F++ + ++++++ + A D+ AL Y +++ ++
Sbjct: 1 MTTLT---FQNTTL-SVINQNNQTFLTASDLGKALDYSDADRSVRRLYTANADEFTTEMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
++T GGIQKVRI S + + + + A+ F +WV +VL
Sbjct: 57 ALVEMQTAGGIQKVRIFSLRGAHLIAMFARTKVAKAFRKWVL-DVL 101
>gi|254780555|ref|YP_003064968.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040232|gb|ACT57028.1| hypothetical protein CLIBASIA_02210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 41
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE 38
MS + PF E N IR +VD+D N WF+ KDVA L +
Sbjct: 1 MSDMIPFNLEHNPIRIVVDEDGNYWFMVKDVAGGLDFT 38
>gi|213969534|ref|ZP_03397670.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301384788|ref|ZP_07233206.1| hypothetical protein PsyrptM_19227 [Pseudomonas syringae pv. tomato
Max13]
gi|302061411|ref|ZP_07252952.1| hypothetical protein PsyrptK_15600 [Pseudomonas syringae pv. tomato
K40]
gi|213925630|gb|EEB59189.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 191
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G +
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLNGEAE 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 82 PELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 119
>gi|68304206|ref|YP_249674.1| BRO-C [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973035|gb|AAY84001.1| BRO-C [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 268
Score = 55.4 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 23/224 (10%)
Query: 1 MSTITP---FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--- 54
M++ F+ + + ++VD + WF +A+ L + + + K+
Sbjct: 1 MNSKVITKFFKDDFKHVISVVDLYEEEWFCGTQLASILEIGVNRSILKIVDEDNRKKLKF 60
Query: 55 -------------YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
P + + + ++ V L+ S + A +W+ VL L
Sbjct: 61 LKLAISVGTFMKQDPERAKWCGTETIFVNLAGVLELIKGSQIQKAIDLRQWLASTVLIKL 120
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
G Y V + + T + V + A+ +++ + L + T D +
Sbjct: 121 CTDGQYFVNKNQEKIT--RNAMDVEDQKNKEAQDQVIRNMKHKLLDSEQKTVNVMKDNKQ 178
Query: 162 AMDIKHLPSSDNDEYLTITQIGERL--NPPQRARFLNKLLLKRG 203
I + EY + + N R L K++ +
Sbjct: 179 KDMILNKYQKRILEYQNREAQMQNIIRNLSSRNNELGKIINQTN 222
>gi|301381174|ref|ZP_07229592.1| hypothetical protein PsyrptM_00998 [Pseudomonas syringae pv. tomato
Max13]
gi|302058559|ref|ZP_07250100.1| hypothetical protein PsyrptK_01123 [Pseudomonas syringae pv. tomato
K40]
gi|302132587|ref|ZP_07258577.1| hypothetical protein PsyrptN_14410 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 181
Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +ISE LLV +P ++ +W+ EVL
Sbjct: 76 RQLMISESGTLALLVHHYVPESRALRQWLTHEVL 109
>gi|62181159|ref|YP_217576.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128792|gb|AAX66495.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322715648|gb|EFZ07219.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 187
Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK----- 53
M+ + + + F + + D IW + D+A ALGY+++ N + +
Sbjct: 1 MNIVAKSVYNFHGVNLIPVKDVAG-IWLTSADIAKALGYKSTKSISNLFTQYEDEFSQGM 59
Query: 54 -------RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ KVR+ S + + + + P A++F RWV +
Sbjct: 60 TMVIESVTNGINGSTRRMKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 108
>gi|330971155|gb|EGH71221.1| hypothetical protein PSYAR_11704 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 176
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G +
Sbjct: 8 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAR 66
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ EV+P LR
Sbjct: 67 SELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 104
>gi|330938148|gb|EGH41860.1| BRO domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 143
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
WF +D+A +G + + L + G QK +IS+ +Y LLV +P
Sbjct: 36 WFSLQDMARLMGKALDERSTRKLDSDQHRHVWLHSHGEWQKCLMISDSGIYALLVHHYVP 95
Query: 85 SAQKFERWVFEEVLPTLR 102
+ W+ EV+PTLR
Sbjct: 96 ENRALRLWLSSEVIPTLR 113
>gi|326336471|ref|ZP_08202641.1| phage antirepressor protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691344|gb|EGD33313.1| phage antirepressor protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 254
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 47/251 (18%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE------------AINAHC 48
M+ + + N I T + ++ A ++A A G + + A++
Sbjct: 1 MNN-QVYNYNGNNI-TFQLGNGDVMINATEMAKAFG-KTPKDYLRTQSAQELINALSVRL 57
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV-------FEEVLPTL 101
K + +GG + + E A F +W+ + + L
Sbjct: 58 KCLTADLVKVVQGGDIQGTWLHED------------VALDFAQWLSVDFKLWCNDRIKEL 105
Query: 102 RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLE 161
KTG + + L++ + + K L KV T+I L
Sbjct: 106 LKTGV------TTISDEDEAIYNAMNILQKRLEASKQKVQMLESKVELQETEIKY---LA 156
Query: 162 AMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEE 221
+ T TQI + L A+ LN+ L +R +Q + SG + T ++
Sbjct: 157 PKAQYTDEVLQSTSTFTTTQIAKDLG--MSAQALNQKLKERKIQFFQ-SGQWFLTHTYQD 213
Query: 222 RG-GKMCDVPM 231
+G M P
Sbjct: 214 KGYTDMRITPY 224
>gi|330985518|gb|EGH83621.1| hypothetical protein PLA107_10890 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 60
Score = 55.0 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATAL 35
S ITPF+F S +R + F+AKD+A AL
Sbjct: 27 SQITPFDFHSFPVRVVDSVQGEPHFIAKDIAEAL 60
>gi|51102945|gb|AAT96094.1| Pspto3096-like protein [Pseudomonas viridiflava]
Length = 175
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 40/92 (43%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF D+A +G A + L+ G + ++SE V+ LLV
Sbjct: 34 QAWFCLADLARLMGKALDERATLKLDADQRRVVWLQANGEWCRQLMVSESGVFALLVHHY 93
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+P + +W+ EVL LR + +++ PK+
Sbjct: 94 VPENRALRQWLTHEVLTVLRDQHNVTLDNPKV 125
>gi|255319042|ref|ZP_05360263.1| BRO family domain protein [Acinetobacter radioresistens SK82]
gi|262378212|ref|ZP_06071369.1| BRO family domain-containing protein [Acinetobacter radioresistens
SH164]
gi|255303844|gb|EET83040.1| BRO family domain protein [Acinetobacter radioresistens SK82]
gi|262299497|gb|EEY87409.1| BRO family domain-containing protein [Acinetobacter radioresistens
SH164]
Length = 265
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M++++ F + + I D IW + ++A ALGY+ + +A+ N + +
Sbjct: 1 MNSLS---FNTTQFHPIQQNDNQIWITSAELANALGYKQA-DAVTKIFNRNSDEFTRDMT 56
Query: 57 LKTEGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFE----EVL 98
VR+ S + + + P A++F +WV + EVL
Sbjct: 57 QMINNPQTPNLGVRVFSLRGCHLITFFARTPVAKEFRKWVLDVLDNEVL 105
>gi|332088060|gb|EGI93185.1| BRO family, N-terminal domain protein [Shigella boydii 5216-82]
Length = 300
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG----------VAKRYPLK 58
F+S+ + TI + + WF A +ATAL Y ++ + + K ++
Sbjct: 50 FKSHILETI-EHNGKSWFTAATLATALEYSRTDSVARIYDRNRDEFSVEMTTTVKLTVVR 108
Query: 59 TEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
G +Q RI S + + + +T P A++F RWV +
Sbjct: 109 KTGSVQMNNRIFSLRGAHLVAMFATTPVAKEFRRWVLD 146
>gi|323173136|gb|EFZ58767.1| BRO family, N-terminal domain protein [Escherichia coli LT-68]
Length = 300
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG----------VAKRYPLK 58
F+S+ + TI + + WF A +ATAL Y ++ + + K ++
Sbjct: 50 FKSHILETI-EHNGKSWFTAATLATALEYSRTDSVARIYDRNRDEFSVEMTTTVKLTVVR 108
Query: 59 TEGGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
G +Q RI S + + + +T P A++F RWV +
Sbjct: 109 KTGSVQMNNRIFSLRGAHLVAMFATTPVAKEFRRWVLD 146
>gi|51102963|gb|AAT96111.1| Pspto3096-like protein [Pseudomonas viridiflava]
Length = 176
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 23 NIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKST 82
WF D+A +G A + L+ G ++ ++SE V+ LLV
Sbjct: 34 QAWFCLADLARLMGKALDERATLKLDADQRRVVWLQANGEWRRQLMVSESGVFALLVHHY 93
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+P + +W+ EVL LR + +++ PK+
Sbjct: 94 VPENRALRQWLTHEVLTVLRDQHNVTLDNPKV 125
>gi|224582865|ref|YP_002636663.1| bacteriophage protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224467392|gb|ACN45222.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 215
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 15/109 (13%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK----- 53
M+ + + + F + + D IW + D+A ALGY+++ N + +
Sbjct: 29 MNIVAKSVYNFHGVNLIPVKDVAG-IWLTSADIAKALGYKSTKSISNLFTQYEDEFSQGM 87
Query: 54 -------RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ KVR+ S + + + + P A++F RWV +
Sbjct: 88 TMVIESVTNGINGSTRRMKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 136
>gi|302188611|ref|ZP_07265284.1| hypothetical protein Psyrps6_19782 [Pseudomonas syringae pv.
syringae 642]
Length = 181
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F +R I + Q WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHRRTLRAIFTESQ-AWFCLADLARLMGRALDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|282878103|ref|ZP_06286904.1| toxin-antitoxin system, toxin component, Bro domain protein
[Prevotella buccalis ATCC 35310]
gi|281299761|gb|EFA92129.1| toxin-antitoxin system, toxin component, Bro domain protein
[Prevotella buccalis ATCC 35310]
Length = 245
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 86 AQKFERWV-------FEEVLPTLRKTGSYSVEAPKLRATS-ASTVLRVHKHL-EELAKQA 136
A +F RW+ + + L K G + + + V+R+ L +E A++
Sbjct: 64 ALEFARWLSPAFAIWCNDRIKELLKYGMTATQPTLDEMLNNPDLVIRMATQLKQERAEKT 123
Query: 137 GLKDNQLLLKVNRGVTKITGVDQLEAMDIK-HLPSSDNDEYLTITQIGERLNPPQRARFL 195
L+ + N ++ + +A +K + +D T TQI + A+ L
Sbjct: 124 RLEAENA--QANERISLQDTQLKQQAPKVKSYDEYISSDGTFTTTQIAKEYGWG--AKTL 179
Query: 196 NKLLLKRGLQVSKVSGGYRPTPKGEERG 223
N L +RG+Q + + + T K + +G
Sbjct: 180 NNKLKERGIQYKQ-NRQWLLTAKYDGKG 206
>gi|253990594|ref|YP_003041950.1| hypothetical protein PAU_03120 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253991057|ref|YP_003042413.1| hypothetical protein PAU_03583 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782044|emb|CAQ85208.1| putative phage protein [Photorhabdus asymbiotica]
gi|253782507|emb|CAQ85671.1| putative phage protein [Photorhabdus asymbiotica]
Length = 194
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 14/102 (13%)
Query: 8 EFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG--------------VAK 53
F+++ + + D IWF +K VAT L Y + N + V
Sbjct: 6 TFKNHTVVPFDNGDGKIWFTSKQVATLLDYSKTKSVTNLYNVNSDEFTPAMTEVITRVTS 65
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ KVRI S +Y L + + P A+ +WV +
Sbjct: 66 KESDTYSNLKTKVRIFSLRGLYLLGMLADTPVAKDLRKWVLD 107
>gi|289627790|ref|ZP_06460744.1| hypothetical protein PsyrpaN_22089 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|330867315|gb|EGH02024.1| hypothetical protein PSYAE_08657 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 170
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 17 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE LLV +P + +W+ EVL L S +++ P++
Sbjct: 76 RQLMISESGGLALLVHHYVPENRALRQWLTHEVLTVLHDQQSVTLDNPRM 125
>gi|28870270|ref|NP_792889.1| hypothetical protein PSPTO_3096 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28853517|gb|AAO56584.1| conserved domain protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 214
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G Q
Sbjct: 50 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECQ 108
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +ISE LLV +P + +W+ EVL
Sbjct: 109 RQLMISESGTLALLVHHYVPENRALRQWLTHEVL 142
>gi|330889636|gb|EGH22297.1| hypothetical protein PSYMO_12652 [Pseudomonas syringae pv. mori
str. 301020]
Length = 157
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 32/78 (41%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
D WF D+A +G A + L+ G Q+ +ISE V LLV
Sbjct: 8 DAQAWFCLADLARLMGKALDERATLKLDADQRREVWLQANGECQRQLMISESGVLALLVH 67
Query: 81 STLPSAQKFERWVFEEVL 98
+P + +W+ EVL
Sbjct: 68 HYVPENRALRQWLTHEVL 85
>gi|148265425|ref|YP_001232131.1| prophage antirepressor [Geobacter uraniireducens Rf4]
gi|146398925|gb|ABQ27558.1| prophage antirepressor [Geobacter uraniireducens Rf4]
Length = 273
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATAL-GYENSNEAINA-------HCKG---VAKRYPL 57
F+ KIR + D WFV +DV AL ++ + I KG + +
Sbjct: 8 FKDKKIRRTLHND-EWWFVVEDVVLALIDSKDPKQYIQRMKQRDPELGKGWVHIVHTLSI 66
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+T GG Q++ + ++R++ P A+ F+RW+
Sbjct: 67 ETSGGAQRMLCANTEGIFRIIQSIPSPKAEPFKRWL 102
>gi|330977805|gb|EGH77708.1| hypothetical protein PSYAP_13665 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 191
Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 23 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 81
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W+ V+P LR
Sbjct: 82 SELMVSESGAYAMMVHHYHAENRGLRQWLTHVVVPALR 119
>gi|320182117|gb|EFW57021.1| Phage Rha protein [Shigella boydii ATCC 9905]
Length = 297
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP------------ 56
F+S+ + TI + + WF A +ATAL Y ++ + + + P
Sbjct: 46 FKSHVLETI-EHNGKQWFTAATLATALEYSRGDKITQIYNRNSDEFTPCMSINLKMRFNG 104
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + VRI S + + + +T P A++F RWV +
Sbjct: 105 INNSLREKDVRIFSLRGAHLVAMFATTPVAKEFRRWVLD 143
>gi|330942435|gb|EGH45035.1| hypothetical protein PSYPI_22882 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 181
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE--AINAHCKGVAKRYPLKTEGGIQ 64
F S +R I + Q WF D+A +G + A + L+ G Q
Sbjct: 19 FLRHSRTLRAIFTESQ-AWFCLADLARLMG--RPLDERATLKLDADQRREVWLEAHGECQ 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
+ +ISE V LLV +P + +W+ EVL TL + +++ P++
Sbjct: 76 RQLMISESGVLALLVHHYVPENRALRQWLTHEVLTTLHDQQNVTLDNPRM 125
>gi|323153460|gb|EFZ39715.1| BRO family, N-terminal domain protein [Escherichia coli EPECa14]
Length = 247
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 18 VDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAKRYPLKTEGG-IQKVRII 69
++ + IWF +K++A AL Y ++ N+ I+ G+++ T G +K RI
Sbjct: 60 INHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQVVESTTSGNYRKKTRIF 119
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFE 95
S + + + + P A++F RWV +
Sbjct: 120 SLRGAHLIAMFARTPVAKEFRRWVLD 145
>gi|319897244|ref|YP_004135439.1| phage antirepressor protein [Haemophilus influenzae F3031]
gi|317432748|emb|CBY81113.1| phage antirepressor protein [Haemophilus influenzae F3031]
Length = 283
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T+T F++ + +++++ + A D+ AL Y +AI + +
Sbjct: 1 MTTLT---FQNTTL-SVINQHNQTFITANDLGLALEYAMPMQAILKIYDRNADEFTAEMT 56
Query: 57 ----LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP 112
+ T GG+QKVRI S + + + + A+ F +WV + + ++K+ A
Sbjct: 57 ALIDMPTAGGLQKVRIFSLRGAHLIAMFARTKIAKAFRKWVLDVLDEEVKKS-----TAL 111
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
+ + +++ + GL Q + + + + I DQL
Sbjct: 112 LPNTITPEQQQAIQSAVQQAHHRTGL-HWQEIYRQLKAMFHIAKYDQL 158
>gi|260853769|ref|YP_003227660.1| putative antirepressor protein [Escherichia coli O26:H11 str.
11368]
gi|257752418|dbj|BAI23920.1| putative antirepressor protein [Escherichia coli O26:H11 str.
11368]
Length = 243
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 18 VDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAKRYPLKTEGG-IQKVRII 69
++ + IWF +K++A AL Y ++ N+ I+ G+++ T G +K RI
Sbjct: 56 INHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQVVESTTSGNYRKKTRIF 115
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFE 95
S + + + + P A++F RWV +
Sbjct: 116 SLRGAHLIAMFARTPVAKEFRRWVLD 141
>gi|285002337|ref|YP_003422401.1| hypothetical protein PsunGV_gp062 [Pseudaletia unipuncta
granulovirus]
gi|197343597|gb|ACH69412.1| unknown [Pseudaletia unipuncta granulovirus]
Length = 219
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 26/93 (27%)
Query: 31 VATALGYENSNEAINAHC------KGVA--------------------KRYPLKTEGGIQ 64
+A LGYE+ + AI H K K +
Sbjct: 35 IAELLGYEHPDVAIKNHVDPSCCKKWEDLECAAAEHKQMCIFQKVPLPKNIKNAPKHWHS 94
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
I+E V L++ S + A+KF+ W +EE+
Sbjct: 95 NTVFINEAGVISLIMNSVISYAEKFKEWFYEEL 127
>gi|18309124|ref|NP_561058.1| hypothetical protein CPE0142 [Clostridium perfringens str. 13]
gi|18143799|dbj|BAB79848.1| phage-related hypothetical protein [Clostridium perfringens str.
13]
Length = 71
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + +F +I T++ D I ++AKDVA L Y++ ++AIN K Y ++ E
Sbjct: 1 MNDLFIKKFNDEEIITLI-LDNRICWIAKDVAKILNYDDPSKAINQCIKAEKFEYGIEYE 59
>gi|320192280|gb|EFW66925.1| Phage Rha protein [Escherichia coli O157:H7 str. EC1212]
Length = 232
Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 18 VDKDQNIWFVAKDVATALGYENS-------NEAINAHCKGVAKRYPLKTEGG-IQKVRII 69
++ + IWF +K++A AL Y ++ N+ I+ G+++ T G +K RI
Sbjct: 45 INHNNQIWFTSKELAAALKYASTKAVTDIYNKNIDEFTDGMSQVVESTTSGNYRKKTRIF 104
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFE 95
S + + + + P A++F RWV +
Sbjct: 105 SLRGAHLIAMFARTPVAKEFRRWVLD 130
>gi|297374661|emb|CBL42948.1| Hypothetical phage protein [Candidatus Magnetobacterium bavaricum]
Length = 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 17 IVDKDQNIWFVAKDVATALGYENS---NEAINAHCKGV--------AKRYPLKTEGGIQK 65
I D A+ +A LGY N N I H + + PL EGG
Sbjct: 16 IQTVDGEYCLTAEQIAKGLGYNNYVHINRLIERHLDEIEPYRFSVKLSQNPLSNEGGRPS 75
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ SE +Y + + + P A++F + V +L LR+
Sbjct: 76 YLLYSEEGIYIICMLARTPKAKEFRKQVAA-ILKGLRQQ 113
>gi|330981850|gb|EGH79953.1| BRO domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 25 WFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLP 84
WF +D+A +G + + L + G QK +IS+ +Y LLV +P
Sbjct: 36 WFSLQDMARLMGKALDERSTRKLDSDQHRHVWLHSHGEWQKCLMISDSGIYALLVHHYVP 95
Query: 85 SAQKFERWVFEEVLPTLR 102
+ W+ EV+PTL
Sbjct: 96 ENRALRLWLSSEVIPTLC 113
>gi|153816862|ref|ZP_01969529.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126512665|gb|EAZ75259.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
Length = 228
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 15/107 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------- 53
M++ F+ + +++ +W A D+A ALGY++ N + + +
Sbjct: 1 MTSALTFQNTHFDV---IEQHNQLWLSASDIANALGYKSPKSISNIYARYSDEFSQGMTL 57
Query: 54 -----RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + RI S + + + + A++F +WV +
Sbjct: 58 VINLMTNGINGSKRRNETRIFSLRGAHLIAMFARTAIAKQFRKWVLD 104
>gi|228962319|ref|ZP_04123737.1| KilA protein, putative phage-related DNA binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228797351|gb|EEM44546.1| KilA protein, putative phage-related DNA binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 157
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
++ A ++ K ++ A K+ L ++ +K+T +DQ+
Sbjct: 5 TINALLQDPDLLISLASQLKDEQQARHMAEQKNLMLTQQIAENESKMTYLDQI------- 57
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKM 226
+ + +T++QI A LNK+L +Q KV+ + K + +G K
Sbjct: 58 ---LQSKDTVTVSQIAADYGL--SAVRLNKILKDEKVQY-KVNNQWLLYAKHQNKGYTKS 111
Query: 227 CDVPMQHVEGS 237
+ + H +GS
Sbjct: 112 QTIDVTHSDGS 122
>gi|330891679|gb|EGH24340.1| hypothetical protein PSYMO_23928 [Pseudomonas syringae pv. mori
str. 301020]
Length = 184
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
TPF + ++ ++ ++Q WF A+D+ +G+ + + + L G Q
Sbjct: 16 TPFHRHNRQLLALLLENQ-PWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQ 74
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
++SE Y ++V + +W EV+P LR
Sbjct: 75 SELMVSESGAYAMMVHHYHAENRGLRQWDTNEVVPALR 112
>gi|186687146|ref|YP_001870289.1| hypothetical protein Npun_BF109 [Nostoc punctiforme PCC 73102]
gi|186469449|gb|ACC85248.1| hypothetical protein Npun_BF109 [Nostoc punctiforme PCC 73102]
Length = 272
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 5/140 (3%)
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
E P + ++ + E A QL + V E +
Sbjct: 128 EKPLKALAPSHEAAQLALLVGEFAGLEKSLTAQLAVNAATKVNPALKPAADELKTAIAIT 187
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGG--YRPTPKGEERGGKMC 227
+ +D YL T IG+++ A +N L+ GLQ YRPT G+E G +
Sbjct: 188 NVSDDAYLKPTDIGKKVG--MSAVAVNNRLVHAGLQYRTDDKKIPYRPTESGKEWGRMVS 245
Query: 228 DVPMQHVEGSTQQLKWNSNL 247
V + + QL+W +
Sbjct: 246 AVAKGSNQ-TVFQLRWLPTI 264
>gi|330955340|gb|EGH55600.1| hypothetical protein PSYCIT7_29141 [Pseudomonas syringae Cit 7]
Length = 165
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 34/82 (41%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
+ WF A+D+ +G+ + + + L G Q ++SE Y ++V
Sbjct: 12 ENQPWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAQSELMVSESGAYAMMVH 71
Query: 81 STLPSAQKFERWVFEEVLPTLR 102
+ +W+ EV+P LR
Sbjct: 72 HYHAENRGLRQWLTNEVVPALR 93
>gi|325152616|gb|ADY88153.1| BRO-A [Helicoverpa armigera SNPV]
gi|325152619|gb|ADY88155.1| BRO-A [Helicoverpa armigera SNPV]
Length = 144
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 1 MSTITPFEFESNKIRTI-VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR 54
MS +T +F ++ T VD D W VA A AL Y +N+AI +R
Sbjct: 1 MS-LTKIKFGDKEVETYTVDFDGEKWMVANPFAEALDYSRANKAIFEKVSAENQR 54
>gi|152985122|ref|YP_001348193.1| hypothetical protein PSPA7_2833 [Pseudomonas aeruginosa PA7]
gi|150960280|gb|ABR82305.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 170
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV-R 67
F ++ + D WFV D + L + + A++ L TE G +
Sbjct: 13 FRQQRLLRALLIDDQAWFVLDDFSRLLDLPCPEQLLTRLDDDQARQEALHTERGEDEAQW 72
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ISE Y L+ RW+ EV+P LR
Sbjct: 73 LISESGAYAALIYYQQGDGGDLRRWLSGEVVPELR 107
>gi|300922790|ref|ZP_07138877.1| hypothetical protein HMPREF9548_01023 [Escherichia coli MS 182-1]
gi|300420894|gb|EFK04205.1| hypothetical protein HMPREF9548_01023 [Escherichia coli MS 182-1]
Length = 236
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCK-------GVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS + K G+
Sbjct: 29 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 88
Query: 53 KRYPLKTEGG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + P A++F RWV +
Sbjct: 89 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 132
>gi|157159777|ref|YP_001457095.1| hypothetical protein EcHS_A0323 [Escherichia coli HS]
gi|157065457|gb|ABV04712.1| putative phage protein [Escherichia coli HS]
Length = 208
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCK-------GVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS + K G+
Sbjct: 1 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 60
Query: 53 KRYPLKTEGG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + P A++F RWV +
Sbjct: 61 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTPVAKEFRRWVLD 104
>gi|322384966|ref|ZP_08058622.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321150263|gb|EFX43770.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 274
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 17/139 (12%)
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMD 164
Y ++ + + + R H++LE+ K A L ++L+L +VN K + D +
Sbjct: 95 YFLDLERKWNSPEMVIKRAHEYLEQ--KVAALTTDKLVLTQQVNELQPKASYYDMV---- 148
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGG 224
N L++++I + A N+ L + G+Q + + K +++G
Sbjct: 149 ------LQNKSLLSVSKIAKDYG--MSAIAFNQKLHELGVQFKQ-GDIWLLYAKYQDKGY 199
Query: 225 KMCDVPMQHVEGSTQQLKW 243
+ E S KW
Sbjct: 200 TQTTTHVIDAEKSKVNTKW 218
>gi|222148697|ref|YP_002549654.1| Prophage antirepressor [Agrobacterium vitis S4]
gi|221735683|gb|ACM36646.1| Prophage antirepressor [Agrobacterium vitis S4]
Length = 136
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 42 EAINAHCKGVAKRYPLKT-------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVF 94
+A N + L T G I +EP +YRL+ ST P A++ +R VF
Sbjct: 12 QATNRLPDDEKAYWNLNTVTSNDGIRAGSPHATIGNEPGLYRLIFSSTKPEAERLKRSVF 71
Query: 95 EEV 97
+V
Sbjct: 72 NKV 74
>gi|218703841|ref|YP_002411360.1| hypothetical protein ECUMN_0597 [Escherichia coli UMN026]
gi|300903171|ref|ZP_07121103.1| conserved domain protein [Escherichia coli MS 84-1]
gi|300929078|ref|ZP_07144572.1| conserved domain protein [Escherichia coli MS 187-1]
gi|301301713|ref|ZP_07207848.1| conserved domain protein [Escherichia coli MS 124-1]
gi|218430938|emb|CAR11812.1| conserved hypothetical protein from bacteriophage origin
[Escherichia coli UMN026]
gi|300404786|gb|EFJ88324.1| conserved domain protein [Escherichia coli MS 84-1]
gi|300462951|gb|EFK26444.1| conserved domain protein [Escherichia coli MS 187-1]
gi|300843210|gb|EFK70970.1| conserved domain protein [Escherichia coli MS 124-1]
gi|315252887|gb|EFU32855.1| conserved domain protein [Escherichia coli MS 85-1]
Length = 202
Score = 52.3 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 21 DQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP----LKTEGGIQKVRIISEP 72
+ IW A +V AL Y + ++A+ + H + T G+Q+ R+ S
Sbjct: 18 NNRIWLTATEVGLALEYAD-DKAVQRIYSRHSDEFTDMMTRVVKVTTPRGMQESRVFSLR 76
Query: 73 DVYRLLVKSTLPSAQKFERWVFE 95
+ + + + P A++F RWV +
Sbjct: 77 GAHLIAMFARTPVAKEFRRWVLD 99
>gi|319956509|ref|YP_004167772.1| filamentation induced by camp protein fic [Nitratifractor
salsuginis DSM 16511]
gi|319418913|gb|ADV46023.1| filamentation induced by cAMP protein Fic [Nitratifractor
salsuginis DSM 16511]
Length = 323
Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 79/209 (37%), Gaps = 21/209 (10%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
MS I +E IRT ++ +++IW D+A + I H + + + +
Sbjct: 1 MSEIVIYEDGDVAIRTTLE-NESIWLRQSDIAMI--FAKDRTVITRHINNILRDKEVDEK 57
Query: 61 GGIQKVRIISEPD---VYRL-LV-----KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
+QK+ I + Y L +V ++ A KF RW + + L K Y+++
Sbjct: 58 SNVQKMHIANSDKPVKFYSLDIVLAVGYRTNSAKAIKFRRWATKVLKEYLLK--GYAIDQ 115
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDN------QLLLKVNRGVTKITGVDQLEAMDI 165
+L+A + + + + L N +++ + + G D+ +I
Sbjct: 116 KRLQAQKLQELNETLRMIRLAVENRELSANEARGFVEIISHYAKSWALLQGYDEQSLTEI 175
Query: 166 K-HLPSSDNDEYLTITQIGERLNPPQRAR 193
K H +Y + +L A+
Sbjct: 176 KGHKEGRFILDYDEAKRAIAQLKATLMAK 204
>gi|331017396|gb|EGH97452.1| hypothetical protein PLA106_15213 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 163
Score = 51.9 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 34/82 (41%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
+ WF A+D+ +G+ + + + L G + ++SE Y ++V
Sbjct: 10 ENQPWFSARDLGRMIGWPLNERTLRKLDADQHRMITLDLHGEAEPELMVSESGAYAMMVH 69
Query: 81 STLPSAQKFERWVFEEVLPTLR 102
+ +W+ EV+P LR
Sbjct: 70 HYHAENRGLRQWITNEVVPALR 91
>gi|153952214|ref|YP_001397964.1| hypothetical protein JJD26997_0839 [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939660|gb|ABS44401.1| hypothetical protein JJD26997_0839 [Campylobacter jejuni subsp.
doylei 269.97]
Length = 89
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 2 STITPFEFES-NKIRTIVDKDQNIWFVAKDVATALGYENSNE 42
S I FE E ++R +D++ F D+ L +++ +
Sbjct: 15 SNIVLFENEELGQVRVALDENNEPLFCLSDICKILEIQDTYK 56
>gi|331016490|gb|EGH96546.1| hypothetical protein PLA106_10721 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 181
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQ 64
T F S +R I D WF D+A +G A + L+ G
Sbjct: 17 TLFLRHSRMLRAIFT-DAQAWFCLADLARLMGKALDQRATLKLDADQRREVWLQANGECL 75
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +ISE LLV +P + +W+ EVL
Sbjct: 76 RQLMISESGTLALLVHHYVPENRALRQWLTHEVL 109
>gi|119967871|ref|YP_950701.1| putative antirepressor [Staphylococcus phage PH15]
gi|112790035|gb|ABI21755.1| putative antirepressor [Staphylococcus phage PH15]
gi|329735999|gb|EGG72274.1| phage regulatory protein, Rha family [Staphylococcus epidermidis
VCU045]
Length = 255
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
SY +E P RA + ++ +Q L+++ K+ K + +D +
Sbjct: 109 SYMIENPVKRA-------ELWIEEQKEKQQLQLENSMQKQKIAEYEPKASYLDTI----- 156
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-G 224
+N +T+ QI + A+ LNKLL + +Q + SG + +G
Sbjct: 157 -----LNNKSLVTVGQIAKDYG--MSAQALNKLLHELKVQYKQ-SGQWLLYSNLHAKGYT 208
Query: 225 KMCDVPMQHVEGST 238
++H +GST
Sbjct: 209 HSSTTEIEHKDGST 222
>gi|329734869|gb|EGG71172.1| phage regulatory protein, Rha family [Staphylococcus epidermidis
VCU028]
Length = 257
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
SY +E P RA + ++ +Q L+++ K+ K + +D +
Sbjct: 111 SYMIEDPVKRA-------ELWIEEQKEKQQLQLENSMQKQKIAEYEPKASYLDTI----- 158
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-G 224
+N +T+ QI + A+ LNKLL + +Q + SG + +G
Sbjct: 159 -----LNNKSLVTVGQIAKDYG--MSAQALNKLLHELKVQYKQ-SGQWLLYSNLHAKGYT 210
Query: 225 KMCDVPMQHVEGST 238
++H +GST
Sbjct: 211 HSSTTEIEHKDGST 224
>gi|49081690|gb|AAT50245.1| PA1153 [synthetic construct]
Length = 185
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 32/134 (23%)
Query: 1 MST--ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALG------------------YEN 39
MS + P F +++ V D+ WFV D+ LG
Sbjct: 1 MSDTLLQPSRFTHHHRVLRAVLLDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLAT 60
Query: 40 SNE---------AINAHCKGVAKR--YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQK 88
+ + A+ H R + G ++ ++SE +Y LL + +A+
Sbjct: 61 AEQRERLFALCHALERHLDTDQWRLAWLHDERHGPRQDCLVSESGLYALLWLAAPGAARG 120
Query: 89 FERWVFEEVLPTLR 102
RWV VLP LR
Sbjct: 121 LRRWVSGSVLPRLR 134
>gi|15596350|ref|NP_249844.1| hypothetical protein PA1153 [Pseudomonas aeruginosa PAO1]
gi|9947075|gb|AAG04542.1|AE004545_5 hypothetical protein PA1153 [Pseudomonas aeruginosa PAO1]
Length = 184
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 32/134 (23%)
Query: 1 MST--ITPFEF-ESNKIRTIVDKDQNIWFVAKDVATALG------------------YEN 39
MS + P F +++ V D+ WFV D+ LG
Sbjct: 1 MSDTLLQPSRFTHHHRVLRAVLLDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLAT 60
Query: 40 SNE---------AINAHCKGVAKR--YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQK 88
+ + A+ H R + G ++ ++SE +Y LL + +A+
Sbjct: 61 AEQRERLFALCHALERHLDTDQWRLAWLHDERHGPRQDCLVSESGLYALLWLAAPGAARG 120
Query: 89 FERWVFEEVLPTLR 102
RWV VLP LR
Sbjct: 121 LRRWVSGSVLPRLR 134
>gi|324019937|gb|EGB89156.1| BRO family protein [Escherichia coli MS 117-3]
Length = 240
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKR 54
M+ + + + F+ + + +IWF + ++A ALGY+ + +AI+ + +
Sbjct: 29 MNIVAKSDYNFQGFTFNPVTE-GGSIWFTSTELAKALGYKKT-DAISQIYARNADEFSDS 86
Query: 55 YPLKTEG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L + VR+ S + + + ++ P A++F RWV +
Sbjct: 87 MSLTLNMKVNGINNSLRNKSVRVYSLRGAHLVAMFASTPKAKEFRRWVLD 136
>gi|226940698|ref|YP_002795772.1| hypothetical protein LHK_01779 [Laribacter hongkongensis HLHK9]
gi|226715625|gb|ACO74763.1| BRO family, N-domain protein [Laribacter hongkongensis HLHK9]
Length = 169
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---------- 50
M+ +T FE+ ++ +++ + +W + D+A ALGY +N+ + +
Sbjct: 1 MNKLT---FENQPLQ-LIEHEGRLWLKSADIARALGYARTNKIGQIYARHTAEFTSSMTT 56
Query: 51 VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ L ++R+ S + L + + Q F RWV +++
Sbjct: 57 EIRCLSLGYGVPPIEMRLFSLRGAHLLGMFARTAKGQAFRRWVLDQL 103
>gi|167463325|ref|ZP_02328414.1| hypothetical protein Plarl_12311 [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322383345|ref|ZP_08057139.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152379|gb|EFX45184.1| DNA-binding anti-repressor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 246
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 17/139 (12%)
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL--KVNRGVTKITGVDQLEAMD 164
Y ++ + + + R H++LE+ K A L+ ++L+L +VN K + D +
Sbjct: 95 YFLDLERKWNSPEMVIKRAHEYLEQ--KVAALETDKLVLTQQVNELQPKASYYDMV---- 148
Query: 165 IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGG 224
N L++++I + A N+ L + +Q + + K +++G
Sbjct: 149 ------LQNKSLLSVSKIAKDYG--MSAIAFNQKLHELKVQYKQ-GDIWLLYAKYQDKGY 199
Query: 225 KMCDVPMQHVEGSTQQLKW 243
+ + S KW
Sbjct: 200 TQTTTHVIDADKSKVNTKW 218
>gi|168236469|ref|ZP_02661527.1| putative prophage protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194735697|ref|YP_002113618.1| gp30 [Salmonella enterica subsp. enterica serovar Schwarzengrund
str. CVM19633]
gi|194711199|gb|ACF90420.1| gp30 [Salmonella enterica subsp. enterica serovar Schwarzengrund
str. CVM19633]
gi|197290324|gb|EDY29680.1| putative prophage protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 212
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 1 MSTI--TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN----AHCKGVAKR 54
M+ + + + F+ + + +IWF + ++A ALGY+ + +AI+ + +
Sbjct: 1 MNIVAKSDYNFQGFAFNPVTE-GGSIWFTSTELAKALGYKKT-DAISQIYARNADEFSDS 58
Query: 55 YPLKTEG---------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L + VR+ S + + + ++ P A++F RWV +
Sbjct: 59 MSLTLNMKVNGINNSLRNKSVRVYSLRGAHLVAMFASTPKAKEFRRWVLD 108
>gi|281428663|gb|ADA69904.1| phage anti-repressor Ant1c [Staphylococcus phage 83A]
Length = 38
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAK-RYPLKTEGG 62
FV KDVA LGY+N + INAH K Y + T G
Sbjct: 1 FVGKDVADILGYKNGSRDINAHVDAEDKLTYQISTAGQ 38
>gi|209401114|ref|YP_002273983.1| baculovirus repeated ORF b [Helicoverpa armigera NPV NNg1]
gi|209364366|dbj|BAG74625.1| baculovirus repeated ORF b [Helicoverpa armigera NPV NNg1]
Length = 101
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 3 TITPFEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+T +F ++++ I KD +W +A A L Y N+ AI+ + + ++Y +
Sbjct: 2 AVTTVQFANSELEVISIKDDSGQLWMLANPFARILEYSNAPNAISTYVRVENQKYFEEIR 61
Query: 61 GGIQKVRIISEPDVYRLLVKSTL 83
+ +++S
Sbjct: 62 SARYGQTCV--------IMRSNK 76
>gi|268611877|ref|ZP_06145604.1| AntA/AntB antirepressor domain protein [Ruminococcus flavefaciens
FD-1]
Length = 254
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
Y + K + + + R + ++ + A ++ L+ + +++++
Sbjct: 93 EYFINLEKQWNSPDAVMARALQIADQKLELAKQQNGSLI---ETTAVQAKQIEEMKPKAT 149
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + IT I + + A++LNK L + G+Q K+ + K +RG
Sbjct: 150 YCDMVLQSAGLMPITTIAKDYG--KSAKWLNKWLHEHGIQY-KLGKVWLLYQKYADRG 204
>gi|167462762|ref|ZP_02327851.1| hypothetical protein Plarl_09395 [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 274
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 13/137 (9%)
Query: 107 YSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
Y ++ + + + R H++LE+ L +VN K + D +
Sbjct: 95 YFLDLERKWNSPEMVIKRAHEYLEQKVAALTTDKFVLTQQVNELQPKASYYDMV------ 148
Query: 167 HLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKM 226
N L++++I + A N+ L + +Q + + K +++G
Sbjct: 149 ----LQNKSLLSVSKIAKDYG--MSAIAFNQKLHELKVQYKQ-GDIWLLYAKYQDKGYTQ 201
Query: 227 CDVPMQHVEGSTQQLKW 243
+ E S KW
Sbjct: 202 TTTHVIDAEKSKVNTKW 218
>gi|116049085|ref|YP_792113.1| hypothetical protein PA14_49500 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115584306|gb|ABJ10321.1| hypothetical protein PA14_49500 [Pseudomonas aeruginosa UCBPP-PA14]
Length = 184
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 30/125 (24%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALG-Y--ENSNEAI------------------- 44
F +R ++ D+ WFV D+A LG Y + A+
Sbjct: 11 FTHHHRVLRAVL-LDEEGWFVLSDLARLLGRYLGGRAPAALCDEAPWPLATAEQREHLFA 69
Query: 45 -----NAHCKGVAKR--YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
H R + G ++ ++SE +Y LL + +A+ RWV V
Sbjct: 70 LCHVLERHLDTDQWRLAWLHDERHGPRQDCLVSESGLYALLWLAVPGAARGLRRWVSGSV 129
Query: 98 LPTLR 102
LP LR
Sbjct: 130 LPRLR 134
>gi|256786682|ref|ZP_05525113.1| DNA-binding protein [Streptomyces lividans TK24]
Length = 232
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 1/138 (0%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
+++I + L+ T P+ F++WV EV+ T+++ GSYS++ +++ +
Sbjct: 1 MQLIDLQGLILLVNACTKPACAPFKQWVA-EVVETVQREGSYSLDEAEVQPVEPGAPIAY 59
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGER 185
+ L+ + L L + T + M + + Q
Sbjct: 60 SMPDQVADAIVRLEAHNLKLDEELAEGQRTSIALQREMLATQQATLAVQQSTLAVQQAMV 119
Query: 186 LNPPQRARFLNKLLLKRG 203
+ A + L+L +G
Sbjct: 120 HALERIADRFDTLVLHQG 137
>gi|254234288|ref|ZP_04927611.1| hypothetical protein PACG_00126 [Pseudomonas aeruginosa C3719]
gi|126166219|gb|EAZ51730.1| hypothetical protein PACG_00126 [Pseudomonas aeruginosa C3719]
Length = 184
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 30/125 (24%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALG------------------YENSNE------ 42
F +R ++ D+ WFV D+ LG + +
Sbjct: 11 FTHHHRVLRAVL-LDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLATAEQRERLFA 69
Query: 43 ---AINAHCKGVAKR--YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
A+ H R + G ++ ++SE +Y LL + +A+ RWV V
Sbjct: 70 LCHALERHLDTDQWRLAWLHDERHGPRQDCLVSESGLYALLWLAVPGAARSLRRWVSGSV 129
Query: 98 LPTLR 102
LP LR
Sbjct: 130 LPRLR 134
>gi|284006721|emb|CBA71978.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 159
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 26/161 (16%)
Query: 32 ATALGYENSNEAI----NAHCKGVAK---------RYPLKTEGGIQKVRIISEPDVYRLL 78
A AL Y N +A+ N H + + R+ S + +
Sbjct: 2 AKALEYANP-KAVTMIYNKHYDEFTEAMSLVLKTSTNGINNSLRELNTRMFSLRGAHLVA 60
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAP----KLRATSASTVLRVHKHLEELAK 134
+ + P A++F +WV + L K P K + R+ + + +
Sbjct: 61 MFARTPVAKEFRKWVLD----ILDKEAGNPQPTPEAHEKFSNKDNQNLARIIALMTQNFR 116
Query: 135 QAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
+N + + ++TG+ M+++ +PS ++
Sbjct: 117 FRDAWNNAIWY----ALREVTGIPSPYPMEVRLVPSIASEC 153
>gi|218695953|ref|YP_002403620.1| hypothetical protein from phage [Escherichia coli 55989]
gi|218352685|emb|CAU98466.1| hypothetical protein from phage [Escherichia coli 55989]
Length = 236
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCK-------GVA 52
M+ + ++ + + + +D + +WF + ++A+AL Y NS + K G+
Sbjct: 29 MNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSDEFSAGMT 88
Query: 53 KRYPLKTEGG-IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + T G +KVR+ S + + + + A++F RWV +
Sbjct: 89 QVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTQVAKEFRRWVLD 132
>gi|114800679|gb|AAG31333.2|AF182207_7 Ant [Lactobacillus phage mv4]
Length = 250
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 70/220 (31%), Gaps = 41/220 (18%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEA-----INAHCKGVAKR---YPLKTEGGIQKVRI 68
I +D A+D+ L + A +G +GG V+
Sbjct: 8 IKVEDDQQLVSARDLYKVLEVKKRFSAWKEQNFKDFEEGTDFTGVPEGTPVKGGNGNVQY 67
Query: 69 ISEPDVY-----RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVL 123
+ + V L + S ++ +R+ Y ++ K + +
Sbjct: 68 LDDYAVTLDMAKELCMMSKTAKGKE------------IRQ---YFIQVEKNWNSPEMIIQ 112
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
R + ++ ++ L L++ K + +D + L TQI
Sbjct: 113 RALEISNARIQELQAQNKSLTLQLEESNKKASYLDIILGTPD----------LLATTQIA 162
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
AR N+LL + G+Q KV+G + +G
Sbjct: 163 ADYGY--SARTFNQLLKEVGIQ-HKVNGQWILYKAYMGKG 199
>gi|254239523|ref|ZP_04932845.1| hypothetical protein PA2G_00137 [Pseudomonas aeruginosa 2192]
gi|126192901|gb|EAZ56964.1| hypothetical protein PA2G_00137 [Pseudomonas aeruginosa 2192]
Length = 184
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 30/125 (24%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVATALG------------------YENSNE------ 42
F +R ++ D+ WFV D+ LG + +
Sbjct: 11 FTHHHRVLRAVL-LDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLATAAQRERLFA 69
Query: 43 ---AINAHCKGVAKR--YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
A+ H R + G ++ ++SE +Y LL + +A+ RWV V
Sbjct: 70 LCHALERHLDTDQWRLAWLHDERHGPRQDCLVSESGLYALLWLAVPGAARGLRRWVSGSV 129
Query: 98 LPTLR 102
LP LR
Sbjct: 130 LPRLR 134
>gi|293396821|ref|ZP_06641095.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291420292|gb|EFE93547.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 206
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 12/105 (11%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAIN---AHCKGVAKRYP--- 56
I +F + + D IWF A+ +A LGY N ++ +N H +
Sbjct: 23 NIAELKFHDQVVIPFDNGDGKIWFTAEQLAKLLGYANKDKVLNLYYRHQDEFTESMTTIA 82
Query: 57 ------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ R+ S + + + S A++ W+ +
Sbjct: 83 KVRVDGINNSLRDVDTRLFSLRGAHLIGMLSRTKIAKELRIWLLD 127
>gi|186686872|ref|YP_001870065.1| KilA domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186469224|gb|ACC85024.1| KilA, N-terminal domain protein [Nostoc punctiforme PCC 73102]
Length = 268
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 7/164 (4%)
Query: 88 KFERWVFEEVLPTLRKTGSYSVEAPKL--RATSASTVLRVHKHLEELAKQAGLKDNQLLL 145
+F W ++ + T ++ + + + ++ + E A QL +
Sbjct: 100 EFRIWANRTLMKVMLTTQVEPIQQQESPHKLLPSHEAAQLALLVGEFAGLEKSLTAQLAV 159
Query: 146 KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
V E + + +D YL T IGE++ A +N L+ GLQ
Sbjct: 160 NAAIRVNPALKPAADELKTAIAITNVSDDAYLKPTDIGEKVG--MSAVAVNNWLVHAGLQ 217
Query: 206 VSKVSGG--YRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNL 247
YRPT G++ G + + + + QL+W +
Sbjct: 218 YRTDDKKIPYRPTDSGKQWGRMVAAIAKGSNQ-TVFQLRWLPKV 260
>gi|326790928|ref|YP_004308749.1| phage antirepressor protein [Clostridium lentocellum DSM 5427]
gi|326541692|gb|ADZ83551.1| phage antirepressor protein [Clostridium lentocellum DSM 5427]
Length = 276
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 23/144 (15%)
Query: 101 LRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQ-AGLKDNQLLLKVNRGVTKITGVDQ 159
+++ SY ++ P RA LE+ KQ L++ Q + K + D
Sbjct: 121 IKQKESYQIDDPIERAK--------AWILEQQEKQVLQLENKQQQQIIGELQPKASYYDL 172
Query: 160 LEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG 219
+ + E + IT I + A +NK L +Q SG + K
Sbjct: 173 V----------LQSTELMPITLIAKDYG--MSANAMNKTLFNLNVQY-NQSGTWLLYAKH 219
Query: 220 EERG-GKMCDVPMQHVEGSTQQLK 242
+G + +GST
Sbjct: 220 HAKGYTQSKTQTYTRGDGSTGIKL 243
>gi|237747832|ref|ZP_04578312.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229379194|gb|EEO29285.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 280
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 21/110 (19%)
Query: 1 MSTI----TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG----VA 52
MS + F + + I+ + +A ALGY N N + +
Sbjct: 44 MSNLAFRGITFN--------VQSINNRIYISSAQLAAALGYANENAVTKIYNRNSDEFTD 95
Query: 53 KRYPLKTEGGIQKV----RIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ L G + R+ S + + + S P A++F RWV +VL
Sbjct: 96 EMTRLPNLGSTANLKAERRVFSLRGAHLVAMFSRTPIAKEFRRWVL-DVL 144
>gi|222151194|ref|YP_002560348.1| hypothetical protein MCCL_0945 [Macrococcus caseolyticus JCSC5402]
gi|222120317|dbj|BAH17652.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 256
Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 18/135 (13%)
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSD 172
+L T +L++ + +EE K L++ ++ K VD +
Sbjct: 107 RLPGTYKEALLQLVEQVEENEK-LHLENTMQKQQIGELKPKANYVDTI----------LK 155
Query: 173 NDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPM 231
+ +TI QI + A+ +NKLL + +Q + SG + +G +
Sbjct: 156 SKSLVTIGQIAKDYG--MSAQEMNKLLQRFKIQYKQ-SGQWLLYSNHHAKGYTHSETTEI 212
Query: 232 QHVEGS---TQQLKW 243
H GS KW
Sbjct: 213 THKNGSVSVRMHTKW 227
>gi|157362840|ref|YP_001471699.1| prophage antirepressor-like protein [Serratia proteamaculans 568]
gi|157324927|gb|ABV44023.1| Prophage antirepressor-like protein [Serratia proteamaculans 568]
Length = 353
Score = 48.8 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 61/161 (37%), Gaps = 18/161 (11%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK------------RYPLKTEGGIQ 64
+V+ IW +K++A AL Y ++ + + K + +
Sbjct: 14 VVNHVNQIWLTSKELAAALKYSSAKSVTDIYNKNEDEFTDAMSLVVESMTNGINGSKRRM 73
Query: 65 KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLR 124
KVR+ S + + + + A++F RWV + + + AP + T + L
Sbjct: 74 KVRVFSLRGAHLIAMFARTAVAKEFRRWVLD-----ILDKEASGSPAPLVVRTERNNYLA 128
Query: 125 VHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+++ LE + + ++ ++++ GV +
Sbjct: 129 MNELLERPRSFVSEFNGMAYVD-SKTLSRVYGVSSRALHSV 168
>gi|256849866|ref|ZP_05555297.1| Lj965 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
gi|256713355|gb|EEU28345.1| Lj965 prophage antirepressor [Lactobacillus crispatus MV-1A-US]
Length = 247
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 41/236 (17%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYENS-----NEAINAHCKGVA-----KRYPLKTEGGI 63
I+ V DQ A+D+ LG + + K V K + G
Sbjct: 5 IKVTVQNDQQ-LVSARDLHEGLGLKKKFTDWWKQNSKDFEKNVDYTYSPKSAHVGNGGTR 63
Query: 64 QKVRIISEPDVYR-LLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTV 122
Q D+ + L + S +++ + Y +E + V
Sbjct: 64 QIDDYALTIDMAKQLCLMSRTEKGKQYRK---------------YLIEVERKWNDPQEIV 108
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQI 182
R + L+ Q L++ L +++ K + +D + L +TQI
Sbjct: 109 KRGYAILQNENTQLKLENKNLTVQLEESNKKASYLDVILGAPDT----------LAVTQI 158
Query: 183 GERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
A+ NKLL K +Q K++G + +G + P ++
Sbjct: 159 AADYGY--NAKDFNKLLHKARIQ-HKINGQWILYKVYMGQG-YVTTKPFTFIDHKG 210
>gi|288871718|ref|ZP_06118724.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288862308|gb|EFC94606.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 227
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 15/96 (15%)
Query: 34 ALGYENSNEAI----NAH----------CKGVAKRYPLKTEGGIQKVRIISEPDVYRLLV 79
AL Y+ A+ H G P+ KV + E +Y +
Sbjct: 42 ALKYKQPQNAVLIVHKRHKERLDKFSVEVSGCQFVTPIYKNENTDKVFMYKERGIYEICR 101
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
S P A F WV++ +L +++K G Y +
Sbjct: 102 YSNQPIADDFNDWVYDTIL-SIKKNGYYIAAEKDEK 136
>gi|303230709|ref|ZP_07317456.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514469|gb|EFL56464.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
Length = 279
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCK-----------GVAKRY 55
FE ++IR++ D ++ W F DV L +N + + K K
Sbjct: 8 FEGSQIRSVWDNEREEWYFSIVDVVGVLSESKNPTDYLRKMKKRDEILASYLGTNCPKVG 67
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ T G I+KV + DV+R++ P A+ F+ W+ E
Sbjct: 68 MVSTNGKIRKVLAGNLKDVFRIIQSIPSPKAEPFKMWLAE 107
>gi|330882505|gb|EGH16654.1| BRO domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 139
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%)
Query: 30 DVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKF 89
D+A +G + L T G QK +ISE V+ LL+ +P +
Sbjct: 1 DIARLMGKRLDERNTRKLDADQRRTAWLLTHGEWQKCLLISESAVFALLIHHYIPENRAL 60
Query: 90 ERWVFEEVLPTL 101
RW+ ++VLP L
Sbjct: 61 RRWLTQDVLPAL 72
>gi|312977810|ref|ZP_07789556.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus CTV-05]
gi|310895117|gb|EFQ44185.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus CTV-05]
Length = 211
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 13/118 (11%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
Y ++ + + + R + KQ L++ L +++ K + +D +
Sbjct: 92 EYFLDLERKWNSPEMVMHRALEFSNARIKQLKLENKNLSIQLEESNKKASYLDVILGTPD 151
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L TQI A NKLL G+Q KV+G + +G
Sbjct: 152 ----------LLATTQIAADYGY--SAMAFNKLLKSVGIQ-HKVNGQWILYKAYMGKG 196
>gi|227877418|ref|ZP_03995486.1| antirepressor [Lactobacillus crispatus JV-V01]
gi|293380033|ref|ZP_06626132.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus 214-1]
gi|312977993|ref|ZP_07789738.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus CTV-05]
gi|227862922|gb|EEJ70373.1| antirepressor [Lactobacillus crispatus JV-V01]
gi|290923440|gb|EFE00344.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus 214-1]
gi|310894968|gb|EFQ44037.1| toxin-antitoxin system, toxin component, Bro family [Lactobacillus
crispatus CTV-05]
Length = 247
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 13/118 (11%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
Y ++ + + + R + KQ L++ L +++ K + +D +
Sbjct: 92 EYFLDLERKWNSPEMVMHRALEFSNARIKQLKLENKNLSIQLEESNKKASYLDVILGTPD 151
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L TQI A NKLL G+Q KV+G + +G
Sbjct: 152 ----------LLATTQIAADYGY--SAMAFNKLLKSVGIQ-HKVNGQWILYKAYMGKG 196
>gi|257451479|ref|ZP_05616778.1| prophage antirepressor [Fusobacterium sp. 3_1_5R]
gi|317058059|ref|ZP_07922544.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313683735|gb|EFS20570.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 116 ATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDE 175
TS + LR+ +E ++ L + +++ K + D + +
Sbjct: 110 PTSFAEALRLAAEQQEKIEELALDNKVKDQQISELQPKASYYDLI----------LQCKD 159
Query: 176 YLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
L++T I + + A ++NK L + G+Q + SG + K E G
Sbjct: 160 LLSMTVIAKDYG--KSAEWMNKKLHQLGVQFKQ-SGVWFLYQKYAENG 204
>gi|9634234|ref|NP_037773.1| ORF13 38.7kD [Spodoptera exigua MNPV]
gi|6960473|gb|AAF33543.1|AF169823_13 ORF13 38.7kD [Spodoptera exigua MNPV]
Length = 363
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 16/187 (8%)
Query: 8 EFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLKTEGGIQ 64
+F+ T+ + +W +A LG+ AI+ G KR L +
Sbjct: 44 QFDDQFSFTVDYIFNDEVWIAGNKLAEGLGFREPQTAIDEFVDGKYKRTINELVFNNSVD 103
Query: 65 KVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEV--------LPT-LRKTGSYSVEAP 112
+++ V +L+ + + +F W+ EEV LP+ + + + A
Sbjct: 104 DTNGLVCVNKHGVLQLIDRLDFKNKAEFTAWIIEEVYVELENKFLPSPIDDKLNKVLAAV 163
Query: 113 KLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL-EAMDIKHLPSS 171
+ LR ++ + N + ++N+ ++ + VD+L + H ++
Sbjct: 164 DTIKQHNNEALRTDDQFKDQVIERFEWFNVQISELNKKMSTLNNVDELYRRLQDYHKSNN 223
Query: 172 DNDEYLT 178
N +
Sbjct: 224 INTTMFS 230
>gi|163790307|ref|ZP_02184739.1| hypothetical protein CAT7_07603 [Carnobacterium sp. AT7]
gi|159874378|gb|EDP68450.1| hypothetical protein CAT7_07603 [Carnobacterium sp. AT7]
Length = 253
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 23/149 (15%)
Query: 104 TGSYSVEAPKLRATS-------ASTVLRVHKHLEELAKQAGLKDNQLLLK--VNRGVTKI 154
T Y ++ ++ + A + R + +EE + L + + + + KI
Sbjct: 90 TAKYVMKFNEMESKQSPASYMIADPIARAKQWIEEQQQTQLLIEKNAVQEQLIAEYEPKI 149
Query: 155 TGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYR 214
T +D++ ++ + ITQI A LN++L +G+Q KV G +
Sbjct: 150 TYLDEI----------LNSKNTMAITQIAADYG--MSAIELNRVLAFQGVQ-RKVGGQWV 196
Query: 215 PTPKGEERGGKMCDVPMQHVEGSTQQLKW 243
K G + G+ + KW
Sbjct: 197 LLTKHMNNG-YTKSKTYTNDTGAYPRTKW 224
>gi|266622349|ref|ZP_06115284.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288865940|gb|EFC98238.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 232
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 15/96 (15%)
Query: 34 ALGYENSNEAI----NAHCKGVA----KRYPLKTEGGIQKVR------IISEPDVYRLLV 79
AL Y+N ++ I N H + K PL +G R + E +Y +
Sbjct: 36 ALKYKNPSKGIEDIHNRHHDRLDTMSVKVDPLSLQGSNPHYRNGERAYMYPEKGIYEICR 95
Query: 80 KSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLR 115
S A F WV+ +V+ +++K G Y +
Sbjct: 96 YSRQKVAGDFYDWVY-DVIQSIKKNGYYIASEKDEK 130
>gi|296840844|ref|ZP_06863578.2| putative phage anti-repressor protein [Neisseria polysaccharea ATCC
43768]
gi|296839773|gb|EFH23711.1| putative phage anti-repressor protein [Neisseria polysaccharea ATCC
43768]
Length = 215
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 45/222 (20%), Positives = 82/222 (36%), Gaps = 36/222 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY--ENSNEAINA-----------H 47
M+ + +F ++I I+D + W ++ + ALGY EN+ +IN H
Sbjct: 7 MNALVS-QFNPSQI-AIIDHNGGKWLTSEQLGLALGYLPENARTSINRLYNRHIEEFSEH 64
Query: 48 CKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
K + G ++++RI S+ + P+A+ F W E++
Sbjct: 65 DSTEVKLTAID--GKLRELRIFSQSGCILASFFANTPNAKAFRAWAKEKL---------- 112
Query: 108 SVEAPKLRATSASTVLRVHKHLE--ELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ A + T+ + E A A D LL+ G++Q EA +
Sbjct: 113 AEPAADMLQVDRDTLQYAFDRAQRLEAAYLAVCPDMARLLRYLEM-----GLNQAEAAKL 167
Query: 166 KHL-PSSDNDEYLTITQIG-ERLNPPQRARFLNKLLLKRGLQ 205
+ PS+ + +G P + R + L G Q
Sbjct: 168 LGIAPSNVRRRLKQLADLGLADYRPDPKYRNRHALAAANGQQ 209
>gi|260427844|ref|ZP_05781823.1| prophage antirepressor [Citreicella sp. SE45]
gi|260422336|gb|EEX15587.1| prophage antirepressor [Citreicella sp. SE45]
Length = 49
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY 37
I F+F + I ++D D W AKDV ALG
Sbjct: 6 IPLFDFNGSDI-GVIDADGEPWSPAKDVCEALGI 38
>gi|80159710|ref|YP_398454.1| hypothetical protein CST024 [Clostridium phage c-st]
gi|78675300|dbj|BAE47722.1| conserved hypothetical protein [Clostridium phage c-st]
Length = 240
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 25/105 (23%)
Query: 2 STITPFEFESNKIRTIVDKD------QNIWFVAKDVATALGY--ENSNEAINAHCKGV-- 51
+++ F E +++ + +D + F K V L Y N I +C
Sbjct: 3 NSLMIF--EGSELEILTKEDVNFEFEGTVLFNGKQVCEILEYNINNYAREITKYCDEENV 60
Query: 52 -----AKRYPLKTEG--------GIQKVRIISEPDVYRLLVKSTL 83
K PL G + + I+E V+R+L KST
Sbjct: 61 YMVTKDKLVPLNDTSKEYVPITLGQRGTKFINEDGVWRMLNKSTK 105
>gi|16800329|ref|NP_470597.1| hypothetical protein lin1260 [Listeria innocua Clip11262]
gi|16413734|emb|CAC96491.1| lin1260 [Listeria innocua Clip11262]
Length = 255
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 15/130 (11%)
Query: 109 VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
++ + T A + K EL +Q L++ + K++ DQ+
Sbjct: 106 MQTFYIPGTYAEALTLAAKQ-AELNEQLMLENEVKTQTIAEYEPKVSYYDQI-------- 156
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMC 227
+ +T+TQI + A LNK+L + +Q KV G + K G K
Sbjct: 157 --LKSPGLITVTQIAADYDLT--AHKLNKILYEEQVQ-HKVGGQWILYKKHMNLGLTKSE 211
Query: 228 DVPMQHVEGS 237
V + H G
Sbjct: 212 TVSIVHSNGR 221
>gi|16800806|ref|NP_471074.1| hypothetical protein lin1738 [Listeria innocua Clip11262]
gi|16414225|emb|CAC96969.1| lin1738 [Listeria innocua Clip11262]
Length = 255
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 15/130 (11%)
Query: 109 VEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHL 168
++ + T A + K EL +Q L++ + K++ DQ+
Sbjct: 106 MQTFYIPGTYAEALTLAAKQ-AELNEQLMLENEVKTQTIAEYEPKVSYYDQI-------- 156
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMC 227
+ +T+TQI + A LNK+L + +Q KV G + K G K
Sbjct: 157 --LKSPGLITVTQIAADYDLT--AHKLNKILYEEQVQ-HKVGGQWILYKKHMNLGLTKSE 211
Query: 228 DVPMQHVEGS 237
V + H G
Sbjct: 212 TVSIVHSNGR 221
>gi|164519353|ref|YP_001649140.1| BRO-I [Helicoverpa armigera granulovirus]
gi|163869539|gb|ABY47849.1| BRO-I [Helicoverpa armigera granulovirus]
Length = 265
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
+P+A++F+ W ++LPTL + G Y++ A A + VH + + LKD +
Sbjct: 1 MPAAKQFQAWNTGKLLPTLCQEGEYNM-AKDAPVDVALGMNAVHAATNDGREAPWLKDME 59
Query: 143 ----LLLKVNRGVTKIT 155
+++ +R + +T
Sbjct: 60 CMKTAIVEKDRKIEHLT 76
>gi|284007002|emb|CBA72278.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 187
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYE---NSNEAINAHCKGVAKRYP 56
M+ ++ F++ +VD IW + ++A ALGY N + + +
Sbjct: 1 MNNALSTLTFQNFTFNPVVDS-GQIWLTSTELAQALGYSRTDNVSRVYSRNADEFTDSMT 59
Query: 57 LKTEGGIQK--------VRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + + VR+ S + + + +T P A+ F +WV +
Sbjct: 60 MTVNMTVVRKTGEIDMLVRLFSLRGAHLIAMFATTPIAKLFRKWVLD 106
>gi|262046638|ref|ZP_06019599.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
gi|260573087|gb|EEX29646.1| conserved hypothetical protein [Lactobacillus crispatus MV-3A-US]
Length = 250
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 43/223 (19%)
Query: 14 IRTIVDKDQNIWFVAKDVATALGYE-----NSNEAINAHCKGVAKR-----YPLKTEGGI 63
IR V DQ A+D+ L + ++ ++ +G + GG+
Sbjct: 5 IRITVQNDQQ-LVSARDLYKGLELKIRFSLWVSKNFDSFEEGQDFTSVSADTEVSNNGGV 63
Query: 64 Q----KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSA 119
Q + +++ L + S ++ + Y +E +
Sbjct: 64 QVRKLQDYLLTIDMAKELCMMSKTEKGKEVRK---------------YFIEVERKWNDPQ 108
Query: 120 STVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
V R + L+ Q L++ L +++ K +D + L I
Sbjct: 109 EIVKRGYAILQNENTQLKLENKNLTIQLEESNKKADYLDVILGTPDA----------LAI 158
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
+QI A NKLL K G+Q KV+G + +
Sbjct: 159 SQIAADYGY--SAVNFNKLLHKVGIQ-HKVNGQWILYRAYMGK 198
>gi|157325355|ref|YP_001468776.1| gp72 [Listeria phage B054]
gi|300765854|ref|ZP_07075828.1| antirepressor [Listeria monocytogenes FSL N1-017]
gi|66733360|gb|AAY53176.1| gp72 [Listeria phage B054]
gi|300513431|gb|EFK40504.1| antirepressor [Listeria monocytogenes FSL N1-017]
Length = 255
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 14/118 (11%)
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
L + EL +Q L++ + K++ DQ+ + +T+T
Sbjct: 117 EALTLAAKQAELNEQLMLENEVKTQTIAEYEPKVSYYDQI----------LKSPGLITVT 166
Query: 181 QIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGS 237
QI + A LNK+L + +Q KV G + K G K V + H G
Sbjct: 167 QIAADYDLT--AHKLNKILYEEQVQ-HKVGGQWILYKKHMNLGLTKSETVSIVHSNGR 221
>gi|149003135|ref|ZP_01828044.1| phage antirepressor protein [Streptococcus pneumoniae SP14-BS69]
gi|147758876|gb|EDK65872.1| phage antirepressor protein [Streptococcus pneumoniae SP14-BS69]
Length = 101
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYS----VEAPKLRATSASTVL 123
+++E VY +L +S P A++F++ V + +L +R G Y VE P+ + T+
Sbjct: 1 MLTEFGVYEVLSQSRKPLAKEFKK-VVKHILKEIRLNGYYMAGELVEEPQTTIKAPDTLA 59
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT 155
++ + +A + + Q + +R +K+T
Sbjct: 60 EAERYYIDTLAKA-IAEAQNMDDKSRLTSKLT 90
>gi|313207411|ref|YP_004046588.1| anta/antb antirepressor domain protein [Riemerella anatipestifer
DSM 15868]
gi|312446727|gb|ADQ83082.1| AntA/AntB antirepressor domain protein [Riemerella anatipestifer
DSM 15868]
Length = 237
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 26/121 (21%)
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+TG+Y++ T K + A++ L+ ++ + K+ +++
Sbjct: 100 RTGAYAL---------PQTFAEALKLAAQQAERLELQQ----AELKKQAPKVAYYEEV-- 144
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
++ QI + L A LNK L +Q + G + K + +
Sbjct: 145 --------LQSESTYNTNQIAKELG--MSAITLNKKLQDLKVQYRQ-GGTWLLYHKYQNK 193
Query: 223 G 223
G
Sbjct: 194 G 194
>gi|294843573|ref|ZP_06788256.1| putative phage-like antirepressor [Acinetobacter sp. 6014059]
Length = 299
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPL 57
MS++ F K + +D IW + ++A ALGY+ ++ N + +
Sbjct: 1 MSSLAL-SFNEVKFNPVPRQDGQIWLSSGELAQALGYKQENAVSKIFNRNSDEFTENMTQ 59
Query: 58 KTEGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +RI S + + + + A++F +WV +VL
Sbjct: 60 IIDNPRLPNLGMRIFSLRGCHLIAIFARTAVAKQFRKWVL-DVL 102
>gi|315023305|gb|EFT36315.1| phage antirepressor protein [Riemerella anatipestifer RA-YM]
gi|325335134|gb|ADZ11408.1| Phage anti-repressor protein [Riemerella anatipestifer RA-GD]
gi|329025291|gb|AEB71655.1| phage antirepressor protein [Riemerella phage RAP44]
Length = 241
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 26/121 (21%)
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
+TG+Y++ T K + A++ L+ ++ + K+ +++
Sbjct: 104 RTGAYAL---------PQTFAEALKLAAQQAERLELQQ----AELKKQAPKVAYYEEV-- 148
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
++ QI + L A LNK L +Q + G + K + +
Sbjct: 149 --------LQSESTYNTNQIAKELG--MSAITLNKKLQDLKVQYRQ-GGTWLLYHKYQNK 197
Query: 223 G 223
G
Sbjct: 198 G 198
>gi|313106123|ref|ZP_07792379.1| hypothetical protein PA39016_000180003 [Pseudomonas aeruginosa
39016]
gi|310878881|gb|EFQ37475.1| hypothetical protein PA39016_000180003 [Pseudomonas aeruginosa
39016]
Length = 184
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 29/120 (24%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALG-Y-------------------ENSNEAINAHCKGV 51
+++ V D+ WFV D+ LG Y E + C +
Sbjct: 15 HRVLHAVLLDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLATAEQRERLFTLCHTL 74
Query: 52 AKR---------YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ + G ++ ++SE +Y LL + +A+ RWV VLP LR
Sbjct: 75 ERHLDADQWRLAWLHDERHGPRQDCLVSESGLYALLWLAVPGAARGLRRWVSGSVLPRLR 134
>gi|260889768|ref|ZP_05901031.1| prophage antirepressor [Leptotrichia hofstadii F0254]
gi|260860374|gb|EEX74874.1| prophage antirepressor [Leptotrichia hofstadii F0254]
Length = 294
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 16/106 (15%)
Query: 2 STITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSN---EAINAHCKGVAK--- 53
+ I F E KIR++ D ++ W F DV AL N N + + K
Sbjct: 3 NNIQIF--EGKKIRSVWDNEKEEWYFSVVDVVGALTDSLNPNNYWKVLKKRLKDEGNELV 60
Query: 54 ------RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ +G + + ++R++ P A+ F+ W+
Sbjct: 61 TNCNRLKMKSHKDGKMYMTDVADIQGIFRIIQSIPSPKAEPFKMWL 106
>gi|21668333|emb|CAC84479.1| AV1-BRO-18 protein [Spodoptera frugiperda ascovirus 1a]
Length = 85
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHC-----KGVAKR 54
M+ + F + K+ ++ D+ +W +A A L Y N+AI H K
Sbjct: 1 MAVVKVQFNDQELKVISVKDEAGQLWMLANPFALMLNYNRPNDAIRNHVSNGNKKNFDSL 60
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVK 80
+ T +V +S Y ++
Sbjct: 61 HKFITTSSSLQVSGVSNN--YTIIFS 84
>gi|251810411|ref|ZP_04824884.1| antirepressor [Staphylococcus epidermidis BCM-HMP0060]
gi|251806015|gb|EES58672.1| antirepressor [Staphylococcus epidermidis BCM-HMP0060]
Length = 251
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 146 KVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQ 205
K+ K + +D + +N +T+ QI + A+ LNKLL +Q
Sbjct: 138 KIAEYEPKASYLDTI----------LNNKSLVTVGQIAKDYG--MSAQALNKLLHDLKVQ 185
Query: 206 VSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGSTQ---QLKW 243
+ SG + +++G ++H +GST KW
Sbjct: 186 YKQ-SGQWLLYSNIQDKGYTHSSTTEIEHKDGSTSVRMNTKW 226
>gi|293611298|ref|ZP_06693595.1| predicted protein [Acinetobacter sp. SH024]
gi|292826309|gb|EFF84677.1| predicted protein [Acinetobacter sp. SH024]
Length = 224
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPL 57
MS++ F K + +D IW + ++A ALGY+ ++ N + +
Sbjct: 25 MSSLAL-SFNEVKFNPVPRQDGQIWLSSGELAQALGYKQENAVSKIFNRNSDEFTENMTQ 83
Query: 58 KTEGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +RI S + + + + ++F +WV +VL
Sbjct: 84 IIDNPRLPNLGMRIFSLRGCHLIAMFARTAVGKQFRKWVL-DVL 126
>gi|169786950|ref|YP_001708762.1| putative phage-related protein [Acinetobacter baumannii AYE]
gi|169147111|emb|CAM84774.1| putative phage-related protein [Acinetobacter baumannii AYE]
Length = 232
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPL 57
MS++ F K + +D IW + ++A ALGY+ ++ N + +
Sbjct: 33 MSSLAL-SFNEVKFNPVPRQDGQIWLSSGELAQALGYKQENAVSKIFNRNSDEFTENMTQ 91
Query: 58 KTEGGIQK---VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVL 98
+ +RI S + + + + ++F +WV +VL
Sbjct: 92 IIDNPRLPNLGMRIFSLRGCHLIAMFARTAVGKQFRKWVL-DVL 134
>gi|200003982|ref|YP_002221564.1| conserved phage protein pRha [Bacteroides phage B40-8]
gi|198209679|gb|ACH81962.1| conserved phage protein pRha [Bacteroides phage B40-8]
Length = 234
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 2/140 (1%)
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAM 163
TG +++ + + + + K + + N K + +
Sbjct: 83 TGEKALQFKLEYINAFNKMEKTLKEQSIVLPNFSDPAEAAIAWANEYREKQKAQIEAKEA 142
Query: 164 DIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
N++ T T+I + L A LNK L K G+Q + +G + K E
Sbjct: 143 KENVERLIHNNKTYTTTEISKELGFR-SAIELNKTLEKMGIQFKQ-NGTWLLYAKYAENE 200
Query: 224 GKMCDVPMQHVEGSTQQLKW 243
+ T +W
Sbjct: 201 YTSTKQIVLDSGRITYDRRW 220
>gi|107100603|ref|ZP_01364521.1| hypothetical protein PaerPA_01001628 [Pseudomonas aeruginosa PACS2]
Length = 159
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 29/120 (24%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALG------------------YENSNE---------AI 44
+++ V D+ WFV D+ LG + + +
Sbjct: 15 HRVLHAVLLDEEGWFVLSDLVRLLGRYLGGRAPAALCDEAPWPLATAAQRERLFTLCHVL 74
Query: 45 NAHCK-GVAKRYPLKTEG-GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
H + L E G ++ ++SE +Y LL + +A+ RWV VLP LR
Sbjct: 75 ERHLDADQWRLAWLHDERHGPRQDCLVSESGLYALLWLAVPGAARGLRRWVSGSVLPRLR 134
>gi|167753372|ref|ZP_02425499.1| hypothetical protein ALIPUT_01646 [Alistipes putredinis DSM 17216]
gi|167657997|gb|EDS02127.1| hypothetical protein ALIPUT_01646 [Alistipes putredinis DSM 17216]
Length = 247
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 16/167 (9%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
T G IQK +++ L++ T A +F+ + E K A
Sbjct: 55 TDTRGRIQKAYEMTKDGFSFLVMGYTGAKAGQFKE--------------MFIAEFNKREA 100
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEY 176
+ + + E L + L + QL + + + L +
Sbjct: 101 MLKNDDYILARSQEILHNRLKLAEQQLQIAQGTIEKQEEAIKTLTPKAQYTDEVLQSTST 160
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
T+TQI L L ++L+++ + + SG ++PT K ++G
Sbjct: 161 YTLTQIAHDLGLR-SVHALTRILMEKKMLYRQ-SGQWQPTAKVADKG 205
>gi|134287321|ref|YP_001111017.1| Bro22 [Heliothis virescens ascovirus 3e]
gi|133722229|gb|ABO37351.1| Bro22 [Heliothis virescens ascovirus 3e]
Length = 230
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
Query: 1 MSTITPFEFESN--KIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
MS + EF ++ T D +W+ + + AL Y++ A++ +R +
Sbjct: 1 MS-LDELEFGGGVIEVLTAKLNDG-LWYHVQPLVDALEYDDCRMAVDLFVAPRDRRESVI 58
Query: 59 TE---------GGIQ-KVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPT 100
+ +Q I+ ++ L + + A F R++ LP+
Sbjct: 59 LDCYSVSNNAKSQVQVNASFINRAGLHELTLNAASKFANDFRRYLASHFLPS 110
>gi|310828266|ref|YP_003960623.1| hypothetical protein ELI_2679 [Eubacterium limosum KIST612]
gi|308740000|gb|ADO37660.1| hypothetical protein ELI_2679 [Eubacterium limosum KIST612]
Length = 176
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 12 NKIRTIVDKDQN---IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-VR 67
+K+R D + FV K++ + +G ++ + + ++ +K GG +
Sbjct: 18 HKLRVYTDLYEEGSQSHFVLKEIGSYMGCKSYHRLLKKLPASAVQKRLIKNSGGRMHRML 77
Query: 68 IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHK 127
++SE V LL + +A F+R++ V+P +R+ ++ ++ + + +
Sbjct: 78 LVSEEGVLALLKHCSHKAATGFKRYLETCVIPVIRRE----IDTARIMLPESEKTHKDQE 133
Query: 128 HLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIK 166
E + + + + L +V + T ++ +E ++
Sbjct: 134 EKENMEEAIRMLSSALAFQVIKNQELETRLEIVEERLLQ 172
>gi|330995579|ref|ZP_08319479.1| phage regulatory protein, Rha family [Paraprevotella xylaniphila
YIT 11841]
gi|329574985|gb|EGG56538.1| phage regulatory protein, Rha family [Paraprevotella xylaniphila
YIT 11841]
Length = 265
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 103 KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEA 162
K+G Y V S S L + + ++ ++ + + + ++ K ++ +
Sbjct: 115 KSGGYLVPH------SFSEALILAANQQKQIEEQQKQISAMSTEIVEMKKKTDYLEII-- 166
Query: 163 MDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEER 222
+ + TQI + A+ NK+L + G+Q KV+G + +
Sbjct: 167 --------LSSKGTVVTTQIAQDYG--MSAKAFNKILAENGIQ-RKVNGQWILYAPYMSK 215
Query: 223 G-GKMCDVPMQHVEGSTQQL 241
G V + H +G +
Sbjct: 216 GYVHSKSVNITHRDGRPDVI 235
>gi|104780526|ref|YP_607024.1| hypothetical protein PSEEN1333 [Pseudomonas entomophila L48]
gi|95109513|emb|CAK14214.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 178
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 23 NIWFVAKDVATALG--YENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVK 80
WF A ++ G ++ I + L G + ++SE Y LL
Sbjct: 24 QAWFCAHELGRMTGRFFDEH--CIRKLDPDQHRTVQLLRYGQYSETTMVSESGAYTLLAH 81
Query: 81 STLPSAQKFERWVFEEVLPTLR 102
+P + W+ EV+ LR
Sbjct: 82 HHIPENRHLRHWLTHEVVAVLR 103
>gi|285002393|ref|YP_003422457.1| BRO [Pseudaletia unipuncta granulovirus]
gi|197343653|gb|ACH69468.1| BRO [Pseudaletia unipuncta granulovirus]
Length = 423
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 1 MS---TITPFEFESNKIRTIVDK----DQNIWFVA--KDVATALGYENSNEAINAHCKGV 51
MS + F+ E I + D +++ A L +N I++ V
Sbjct: 41 MSLRKQVILFQNE--PIEVVFSDKTGPDGLVYYFLDIAPFARLLNLDNPLSKIDSQHVIV 98
Query: 52 AKRYPLKTEGGI------QKVRIISEPDVYRLLVKSTLPSAQK--FERWVFEEVLPTLRK 103
+ + +E + ++SE +Y+L+ + ++ W+F+ VLPT+++
Sbjct: 99 VEEPAVASETNNWVVRNGRSTTLVSEAGLYQLMFTGKPVTVRQGMVRNWLFDVVLPTIKQ 158
Query: 104 T 104
Sbjct: 159 Y 159
>gi|15320903|ref|NP_203413.1| CUN109 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
gi|15278365|gb|AAK94187.1|AF403738_109 CUN109 putative bro protein, ATP_GTP_A motif, similar to AcMNPV
ORF2 [Culex nigripalpus NPV]
Length = 490
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 8 EFESNKI--RTIVDKD-QNIWFVAKDVATALGYENSNEA-------INAHCKGVAKRYPL 57
+F+ K+ R +D W VAKD+A +GY+N +EA + +
Sbjct: 132 DFDGVKVGVRVFIDPSTGEPWTVAKDLAYVMGYKNGSEAHGRIFDSFKQTVHQLLGKDHP 191
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFER 91
K ++ +I +L++++ + S + ++
Sbjct: 192 KVRSHEGRLVLIDRAGANQLILQARIKSCVELQK 225
>gi|168206548|ref|ZP_02632553.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
gi|170662009|gb|EDT14692.1| conserved hypothetical protein [Clostridium perfringens E str.
JGS1987]
Length = 365
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 77/211 (36%), Gaps = 32/211 (15%)
Query: 1 MSTIT--PFEFESNKI-RTIVDKDQNIWFVAKDVATALGYENSNEAINA--HCKGVAKRY 55
M + +FE I + + + DVA G+ ++ N V +
Sbjct: 1 MKELQLLTEKFEGQNITFRLTENTSEVMID--DVARFCGWTRVAKSGNEVIRWDRVNEYL 58
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR------------- 102
I E +Y L+ K+ A KF WV +VL LR
Sbjct: 59 TELGVPTCGHGDFIPEFVMYALIGKAKNEKATKFMLWV-GQVLTQLRQKGVVILENATKE 117
Query: 103 ------KTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITG 156
K G+Y + L +T+ + ++ L + +A +N +K+++ + K G
Sbjct: 118 AINFEEKFGTYRIRKTFLNSTNITEDYKLFSFLSKQEWKAKRLNNSDRVKLSKLIVK--G 175
Query: 157 VDQLEAMDIKHLPSSDNDEYLTITQIGERLN 187
++Q D L +S E L + ++ +N
Sbjct: 176 LEQRLNRDKSKLRAS---EMLAMQELLTDIN 203
>gi|229144727|ref|ZP_04273126.1| hypothetical protein bcere0012_18870 [Bacillus cereus BDRD-ST24]
gi|228638688|gb|EEK95119.1| hypothetical protein bcere0012_18870 [Bacillus cereus BDRD-ST24]
Length = 166
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 12 NKIRTIVDKDQNIWFVAKDV-ATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
IRT + D WFVAKD+ A+GY N + K + P G K+ +++
Sbjct: 10 GSIRTY-EVDGLKWFVAKDILMDAIGYRNMTDLFTKVDKEEKNKIP---SSGGYKLTVLT 65
Query: 71 EPDVYRLLVK--STLPSAQKFERW 92
+ + + S+ + W
Sbjct: 66 SEGLRQFFDRTISSKEQFNTMKEW 89
>gi|134287246|ref|YP_001110942.1| Bro7 [Heliothis virescens ascovirus 3e]
gi|133722154|gb|ABO37276.1| Bro7 [Heliothis virescens ascovirus 3e]
Length = 350
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 21/146 (14%)
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVLRV--------------- 125
+P AQ+F W+ ++LP L G Y + +AP A+ + V +
Sbjct: 1 MPKAQEFRDWINSDLLPKLCDEGKYDMAADAPCEIASGMNAVHAITHEGRGANWSNPGPS 60
Query: 126 ----HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQ 181
++ +A + + L++ +++ + + + + L +
Sbjct: 61 TSSAAAEYDKRVAEAQMDAMRARLELTESKLEVSELRLAHEREASAWKEREYEMRLQMKD 120
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVS 207
+ + N LN L R ++ +
Sbjct: 121 MAMQANMSLEQFALNYQLADRNVEQN 146
>gi|113461663|ref|YP_719732.1| hypothetical protein HS_1527 [Haemophilus somnus 129PT]
gi|112823706|gb|ABI25795.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 288
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSN---EAINAHCKGVAKRY 55
M+ FE NKIR+I D ++ W F DV L ++ + K +
Sbjct: 1 MNN-QIKIFEGNKIRSIWDNEKEEWYFSVVDVVAVLTESKDPQVYWRVLKKRLKEEGNKT 59
Query: 56 PLK--------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+G ++ + ++R++ P A+ F+ W+ E
Sbjct: 60 VTNCNALKMKAADGKMRLTDVADMQGIFRIIQSVPSPKAEPFKMWLAE 107
>gi|238765577|ref|ZP_04626487.1| hypothetical protein ykris0001_46870 [Yersinia kristensenii ATCC
33638]
gi|238696208|gb|EEP89015.1| hypothetical protein ykris0001_46870 [Yersinia kristensenii ATCC
33638]
Length = 205
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI---NAHCKGVAKRYPL--- 57
I+ F ++++ + D IWF ++ +A L Y +S + N H +
Sbjct: 16 ISALTFRNHEVIPFNNGDGKIWFTSEQLANLLEYTDSKKVANLYNRHKDEFTECMSTVAK 75
Query: 58 ------KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
E ++RI S + + + S A+ RW+ +
Sbjct: 76 LRTSKENNELQCIQMRIFSVRGAHLIGMLSRTKVAKALRRWLLD 119
>gi|188990646|ref|YP_001902656.1| putative DNA-related protein [Xanthomonas campestris pv. campestris
str. B100]
gi|167732406|emb|CAP50600.1| putative DNA-related protein [Xanthomonas campestris pv.
campestris]
Length = 284
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 19/146 (13%)
Query: 10 ESNKIRTIVDKDQNIWFVAKDVATAL-----------GYENSNEAINAHCKGVAKRYPLK 58
+S +R + WF DV AL +EA++ + +
Sbjct: 20 DSAAVRR-TWHEGQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVT 78
Query: 59 TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
T GG Q + + R++ P A+ F+RW+ + R G +V+ L
Sbjct: 79 TAGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLAR--IGNERLQGEEAVDFDALSENQ 136
Query: 119 ASTVLRVH-----KHLEELAKQAGLK 139
LR K L AKQAG++
Sbjct: 137 RRLFLRDQMSQHNKDLAAAAKQAGVE 162
>gi|149921486|ref|ZP_01909938.1| hypothetical protein PPSIR1_30776 [Plesiocystis pacifica SIR-1]
gi|149817689|gb|EDM77156.1| hypothetical protein PPSIR1_30776 [Plesiocystis pacifica SIR-1]
Length = 316
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 41/254 (16%), Positives = 87/254 (34%), Gaps = 49/254 (19%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP------------ 56
FE + T+ + W A ++A LG+ E + K +R P
Sbjct: 15 FEGWSLITVACNHEPTWM-ASELARILGFATPLELLGILAKRWYERCPAGAIHYLEHGDR 73
Query: 57 -------------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
L + + + ++S VY L+ A+ F R + E+V+P
Sbjct: 74 RELLERLDRAHVVLAPDHRRRPIVLLSAVAVYELVSALDSAVARSFARHLREQVIPEFHA 133
Query: 104 T--GSYSVEAPKLRATSAS-------------TVLRVHKHLEELAKQAGLKDNQLLLKVN 148
+ ++E P L + + + + L+ L + + +QL+
Sbjct: 134 HERAATALERPLLSIDAVTIAGNRLEFEQRCFEAAVLERLLDRLERAGTIDADQLIA--- 190
Query: 149 RGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSK 208
++ + + ++T TQ+ ER + +L+ GL+ S+
Sbjct: 191 ---HRVVASEIALGARLVDFEEELAHGWMTPTQVAERW-CDMTPLRVGRLIAHLGLKGSR 246
Query: 209 -VSGGYRPTPKGEE 221
S + +G++
Sbjct: 247 AHSRAFLTKARGQQ 260
>gi|297621314|ref|YP_003709451.1| putative prophage antirepressor [Waddlia chondrophila WSU 86-1044]
gi|297376615|gb|ADI38445.1| putative prophage antirepressor [Waddlia chondrophila WSU 86-1044]
Length = 113
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATAL----GYENSNEAINAHCKGVAKRY- 55
M T + FE +IR + W+V +DV + ++ + + + + +R+
Sbjct: 1 METTSIIFFEGQEIRKTFFR-GEWWYVVRDVVQVISSSADVKDYIKKMRKRDRELRERWH 59
Query: 56 ------PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
P+ T GG Q++ + ++R++ + Q F++W+
Sbjct: 60 DLVVVLPIDTNGGRQRLNCSNLEGLFRIIEAIPVSKTQSFKQWL 103
>gi|115298582|ref|YP_762435.1| 12.4 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
gi|114416849|emb|CAL44680.1| 12.4 kDa BRO-like protein [Spodoptera frugiperda ascovirus 1a]
Length = 108
Score = 45.0 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRY 55
M+ + F + K+ ++ D+ +W +A A L Y N+AI H K+
Sbjct: 1 MAVVKVQFNDQELKVISVKDEAGQLWMLANPFALMLNYNRPNDAIRNHVSNGNKKN 56
>gi|295104927|emb|CBL02471.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3]
Length = 438
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 23/145 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPLKT 59
M+ IT F + + + + + + AL Y N N+AI N H K + PL T
Sbjct: 7 MTVITSKSFGALNVDVYQNDKHQYYMTREQIGAALEYNNPNKAIQNIHVKNTDRLDPLST 66
Query: 60 -------EGGIQKVRIISEPDVYRL-----LVK-STLPSAQKFER--WVFEEVLPTLRKT 104
EGGI K R E VY L + + S P A F W +++ +L +
Sbjct: 67 FLKLRKVEGGITKER---EYIVYSLRGVMEICRLSRQPKADAFMDFCW---DIMESLMR- 119
Query: 105 GSYSVEAPKLRATSASTVLRVHKHL 129
G + PK+ A + + V H
Sbjct: 120 GDSVLATPKMDAALSKEFIDVRLHA 144
>gi|215401410|ref|YP_002332713.1| 38.7 kDa protein [Spodoptera litura nucleopolyhedrovirus II]
gi|209483951|gb|ACI47384.1| 38.7 kDa protein [Spodoptera litura nucleopolyhedrovirus II]
Length = 367
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 23/178 (12%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--YPLKTEGGIQKVR---IISEPDVY 75
+ +W A +A LG+ + AIN G KR L I + +++ V
Sbjct: 68 NDEVWIAADKLAEGLGFPDPQRAINKLVDGKYKRTINELVFNNSINETDGLLCVNKHGVL 127
Query: 76 RLLVKSTLPSAQKFERWVFEEV--------LPT-----LRKTGSYSVEAPKLRATSASTV 122
+L+ + +F W+ EEV LP+ L K + A +
Sbjct: 128 QLIDHLDFKNKAEFTAWIIEEVYVELENKFLPSPLDDKLNK----VLAAVDTIKQHNNEA 183
Query: 123 LRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQL-EAMDIKHLPSSDNDEYLTI 179
R + + + N + ++N+ +T + VD+L + + H ++ + L+I
Sbjct: 184 SRTNDQFKNQVIERFEWFNVQISELNKKMTMLNNVDELYKRLQDYHKSTTTSRTRLSI 241
>gi|306841808|ref|ZP_07474491.1| Hypothetical protein BIBO2_1589 [Brucella sp. BO2]
gi|306288089|gb|EFM59483.1| Hypothetical protein BIBO2_1589 [Brucella sp. BO2]
Length = 76
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFER 91
+ V +ISE +Y+L++KS P A+KF+
Sbjct: 49 RFVSLISESGLYKLVLKSRRPEAKKFQN 76
>gi|328706630|ref|XP_003243156.1| PREDICTED: putative MSV199 domain-containing protein 212L-like
[Acyrthosiphon pisum]
Length = 223
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 17/156 (10%)
Query: 79 VKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGL 138
++S P+A+ F+ +V + ++P +RK ++ + + + + KQ
Sbjct: 1 MRSNKPNAEPFQDFVQDVLIPNIRK---------QIVNNIKNENNSLRNDMNIIIKQNNN 51
Query: 139 KDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKL 198
+Q L + R +D + + K LP + D T ++ +R FLN+
Sbjct: 52 LLSQNTLALQRLEETRDQLDGIHSKLDKVLPDRNVDP--TDKELKHYYILFKRKDFLNEY 109
Query: 199 LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHV 234
+ RG Y T K + + +
Sbjct: 110 MFVRG------QEKYIKTRKNLYKTEFDIIIDSKKN 139
>gi|327198703|emb|CCA61404.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
Length = 148
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKV---------RIISEP 72
++ W D+ +LG+ ++E I + + G + + E
Sbjct: 56 ESPWLRGLDLCKSLGHPENDEHIKKLVDEKHIKSLCQLLGVADNMCDLVIGGKDIYVDEA 115
Query: 73 DVYRLLVKSTLPSAQKFERWVFEEVL 98
+YR++ ST A+ +V + +L
Sbjct: 116 GMYRMITASTHDRAKPMHDFVHQAIL 141
>gi|251810487|ref|ZP_04824960.1| antirepressor [Staphylococcus epidermidis BCM-HMP0060]
gi|282875456|ref|ZP_06284327.1| phage regulatory protein, Rha family [Staphylococcus epidermidis
SK135]
gi|251806091|gb|EES58748.1| antirepressor [Staphylococcus epidermidis BCM-HMP0060]
gi|281295483|gb|EFA88006.1| phage regulatory protein, Rha family [Staphylococcus epidermidis
SK135]
gi|329732992|gb|EGG69333.1| phage regulatory protein, Rha family [Staphylococcus epidermidis
VCU028]
Length = 254
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 19/142 (13%)
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVN--RGVTKITGVDQLEAMDI 165
++ P V R K +EE ++ L + + + K VD++
Sbjct: 102 QLKQPVASYMIEDPVRRAEKWIEEQKEKEKLLEQNSIQQQQIGELKPKADYVDEI----- 156
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPT----PKGEE 221
+ +TITQI A+ LNKLL + LQ +V + +G
Sbjct: 157 -----LKSPGTMTITQIAADYGL--SAQKLNKLLHQARLQ-RRVGKQWVLYIENMNRGYT 208
Query: 222 RGGKMCDVPMQHVEGSTQQLKW 243
+ + V + Q +W
Sbjct: 209 KSHTIEIVRSYGHPDTQPQTRW 230
>gi|78186522|ref|YP_374565.1| hypothetical protein Plut_0642 [Chlorobium luteolum DSM 273]
gi|78166424|gb|ABB23522.1| hypothetical protein Plut_0642 [Chlorobium luteolum DSM 273]
Length = 261
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 18/108 (16%)
Query: 1 MS---TITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSN---EAINAHCKGVA 52
MS I F E K+RT+ D D W F DV L N + K
Sbjct: 1 MSKKEAIQVF--EDRKVRTLWDDDTEEWYFPIVDVVAVLTDSVNPTAYWRKLKERLKKEG 58
Query: 53 KRYPLK--------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
+ +G ++K ++RL+ P A+ F+ W
Sbjct: 59 NQTVTDCHGFKMQAADGKMRKTDCADTEQLFRLIQSIPSPKAEPFKLW 106
>gi|210621020|ref|ZP_03292405.1| hypothetical protein CLOHIR_00348 [Clostridium hiranonis DSM 13275]
gi|210155004|gb|EEA86010.1| hypothetical protein CLOHIR_00348 [Clostridium hiranonis DSM 13275]
Length = 239
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 12/150 (8%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVATALGY-----ENSNEAINAHCKGVAK-RYPL 57
++ F FE I+ + ++D I +D A LG N E N + K
Sbjct: 15 VSLFNFED--IQAVQNEDMTISISIEDAAEVLGLVKITKSNGKEYRNMRLDRINKYSQEY 72
Query: 58 KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR-KTGSYSVEAPKLRA 116
+K I E Y L K A+ F + F L LR KT Y K +
Sbjct: 73 GFSHKWEKGDYIPESFFYWLAFKVENEHAKNFRK-NFSLALRDLRIKT--YLDNTQKAES 129
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQLLLK 146
+ K EE+ ++ + N + L+
Sbjct: 130 RDILLLEENFKATEEILERIVGRTNSITLR 159
>gi|310827718|ref|YP_003960075.1| antirepressor [Eubacterium limosum KIST612]
gi|308739452|gb|ADO37112.1| antirepressor [Eubacterium limosum KIST612]
Length = 279
Score = 44.6 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 7/105 (6%)
Query: 123 LRVHKHLEELAKQAGLKDNQL----LLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
+R + ++ ++ + +L L + + L+ DN
Sbjct: 124 IRYMQAFNQMEEKLRSQTPELPEGDALMAMAVLEAEDIIKNLKPEAEYARKVLDNKGLTP 183
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
IT I + A F+N+LL G+Q + + + G
Sbjct: 184 ITGIAKDYG--MTAEFMNRLLHSLGVQYR-IGKRWYLYSDYQAEG 225
>gi|164519297|ref|YP_001649084.1| BRO-F [Helicoverpa armigera granulovirus]
gi|163869483|gb|ABY47793.1| BRO-F [Helicoverpa armigera granulovirus]
Length = 168
Score = 44.6 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 3 TITPFEFESNKIRT--IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
++ +F ++ T I+ +D W VA A +L Y N+N+AI H ++ +
Sbjct: 81 ALSKVQFGEKEVETFAIMFEDDK-WMVANPFAGSLNYNNTNKAIRNHVSEKNQKNLEENS 139
Query: 61 GGIQKVRII 69
+
Sbjct: 140 ISPSWADYV 148
>gi|21232334|ref|NP_638251.1| DNA-damage-inducible protein d [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767533|ref|YP_242295.1| DNA-damage-inducible protein d [Xanthomonas campestris pv.
campestris str. 8004]
gi|21114105|gb|AAM42175.1| DNA-damage-inducible protein d [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572865|gb|AAY48275.1| DNA-damage-inducible protein d [Xanthomonas campestris pv.
campestris str. 8004]
Length = 286
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 18/134 (13%)
Query: 22 QNIWFVAKDVATAL-----------GYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
WF DV AL +EA++ + + T GG Q + +
Sbjct: 33 GQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVTTAGGPQLLNCTT 92
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH---- 126
R++ P A+ F+RW+ + R G +V+ L LR
Sbjct: 93 LEGALRIIQSIPSPKAEPFKRWLAR--IGNERLQGEEAVDFDALSENQRRLFLRDQMSQH 150
Query: 127 -KHLEELAKQAGLK 139
K L AKQAG++
Sbjct: 151 NKDLAAAAKQAGVE 164
>gi|325924115|ref|ZP_08185680.1| hypothetical protein XGA_4740 [Xanthomonas gardneri ATCC 19865]
gi|325545417|gb|EGD16706.1| hypothetical protein XGA_4740 [Xanthomonas gardneri ATCC 19865]
Length = 284
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 18/134 (13%)
Query: 22 QNIWFVAKDVATAL-----------GYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
WF DV AL +EA++ + + T GG Q + +
Sbjct: 31 GQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVTTAGGPQLLNCTT 90
Query: 71 EPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVH---- 126
R++ P A+ F+RW+ + R G +V+ L LR
Sbjct: 91 LEGALRIIQSIPSPKAEPFKRWLAR--IGNERLQGEEAVDFDALSENQRRLFLRDQMSQH 148
Query: 127 -KHLEELAKQAGLK 139
K L AKQAG++
Sbjct: 149 NKDLAAAAKQAGVE 162
>gi|189423120|ref|YP_001950297.1| hypothetical protein Glov_0039 [Geobacter lovleyi SZ]
gi|189419379|gb|ACD93777.1| conserved hypothetical protein [Geobacter lovleyi SZ]
Length = 282
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATAL-----------GYEN--SNEAINAHCKGVAKRY 55
FE +IR + D WF DV L + ++E IN + +
Sbjct: 12 FEGKQIRKTIHND-EWWFAIIDVVEVLTESSLPKRYWSDLKKKLTSEGINEAYDKIVRLK 70
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G + + ++R++ P A+ F+RW+
Sbjct: 71 MPAADGKKRDTDCANTEGMFRIIQSIPSPKAEPFKRWL 108
>gi|22126104|ref|NP_669527.1| hypothetical protein y2218 [Yersinia pestis KIM 10]
gi|45441738|ref|NP_993277.1| hypothetical protein YP_1937 [Yersinia pestis biovar Microtus str.
91001]
gi|108811730|ref|YP_647497.1| hypothetical protein YPN_1567 [Yersinia pestis Nepal516]
gi|145598328|ref|YP_001162404.1| hypothetical protein YPDSF_1031 [Yersinia pestis Pestoides F]
gi|149365978|ref|ZP_01888013.1| putative phage protein [Yersinia pestis CA88-4125]
gi|162420293|ref|YP_001606630.1| hypothetical protein YpAngola_A2178 [Yersinia pestis Angola]
gi|165927711|ref|ZP_02223543.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939386|ref|ZP_02227934.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166009422|ref|ZP_02230320.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210898|ref|ZP_02236933.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167420302|ref|ZP_02312055.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424714|ref|ZP_02316467.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167468187|ref|ZP_02332891.1| hypothetical protein YpesF_09879 [Yersinia pestis FV-1]
gi|218929200|ref|YP_002347075.1| hypothetical protein YPO2093 [Yersinia pestis CO92]
gi|229894809|ref|ZP_04509989.1| putative phage protein [Yersinia pestis Pestoides A]
gi|229897513|ref|ZP_04512669.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898158|ref|ZP_04513306.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902019|ref|ZP_04517140.1| putative phage protein [Yersinia pestis Nepal516]
gi|270490802|ref|ZP_06207876.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294503847|ref|YP_003567909.1| hypothetical protein YPZ3_1737 [Yersinia pestis Z176003]
gi|21959062|gb|AAM85778.1|AE013825_5 putative phage protein [Yersinia pestis KIM 10]
gi|45436600|gb|AAS62154.1| putative phage protein [Yersinia pestis biovar Microtus str. 91001]
gi|108775378|gb|ABG17897.1| hypothetical protein YPN_1567 [Yersinia pestis Nepal516]
gi|115347811|emb|CAL20729.1| putative phage protein [Yersinia pestis CO92]
gi|145210024|gb|ABP39431.1| hypothetical protein YPDSF_1031 [Yersinia pestis Pestoides F]
gi|149292391|gb|EDM42465.1| putative phage protein [Yersinia pestis CA88-4125]
gi|162353108|gb|ABX87056.1| conserved hypothetical protein [Yersinia pestis Angola]
gi|165912727|gb|EDR31356.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920325|gb|EDR37602.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991977|gb|EDR44278.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208078|gb|EDR52558.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961997|gb|EDR58018.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167056596|gb|EDR66365.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229680915|gb|EEO77010.1| putative phage protein [Yersinia pestis Nepal516]
gi|229688724|gb|EEO80792.1| putative phage protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693850|gb|EEO83899.1| putative phage protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229702282|gb|EEO90301.1| putative phage protein [Yersinia pestis Pestoides A]
gi|262362034|gb|ACY58755.1| hypothetical protein YPD4_1847 [Yersinia pestis D106004]
gi|262365830|gb|ACY62387.1| hypothetical protein YPD8_1704 [Yersinia pestis D182038]
gi|270339306|gb|EFA50083.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294354306|gb|ADE64647.1| hypothetical protein YPZ3_1737 [Yersinia pestis Z176003]
gi|320015228|gb|ADV98799.1| putative phage protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 187
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAI----NAHCKGVAKRYP 56
M+T F I + IW ++A ALG E ++A+ N + +
Sbjct: 1 MNTQLSFRNTQFDI---ANHSGQIWLRGTEIAKALGMEK-SDAVSQIYNRNSDEFTEAMT 56
Query: 57 LKTE---------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L + + VR+ S + + + + A++F +WV +
Sbjct: 57 LTLKLSVKGFGNGKSAKDVRVFSLRGAHLIAMFARTEIAKEFRKWVLD 104
>gi|319997350|gb|ADV91248.1| 38.7 kDa protein [Spodoptera frugiperda MNPV]
Length = 383
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-----VRIISEPDVY 75
+ +W A A+GY + AI+ KR + + I++ V
Sbjct: 75 NDEVWIAGAKFAEAMGYPDPQRAIDKLVDDKYKRTINELVFNNHHDDNNSLICINKHGVV 134
Query: 76 RLLVKSTLPSAQKFERWVFEEV 97
+LL + +F W+ E+V
Sbjct: 135 QLLDNLDFKNKAEFITWIIEDV 156
>gi|227486534|ref|ZP_03916850.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235485|gb|EEI85500.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 37
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALG 36
S + FE ++ T+++KD +F+A +VAT LG
Sbjct: 3 SNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLG 37
>gi|167833698|gb|ACA02574.1| 38.7k protein [Spodoptera frugiperda MNPV]
Length = 382
Score = 44.2 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-----VRIISEPDVY 75
+ +W A A+GY + AI+ KR + + I++ V
Sbjct: 74 NDEVWIAGAKFAEAMGYPDPQRAIDKLVDDKYKRTINELVFNNHHDDNNSLICINKHGVV 133
Query: 76 RLLVKSTLPSAQKFERWVFEEV 97
+LL + +F W+ E+V
Sbjct: 134 QLLDNLDFKNKAEFITWIIEDV 155
>gi|125860140|ref|YP_001036309.1| 38.7 kDa protein [Spodoptera frugiperda MNPV]
gi|120969285|gb|ABM45728.1| 38.7 kDa protein [Spodoptera frugiperda MNPV]
Length = 384
Score = 44.2 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 21 DQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQK-----VRIISEPDVY 75
+ +W A A+GY + AI+ KR + + I++ V
Sbjct: 76 NDEVWIAGAKFAEAMGYPDPQRAIDKLVDDKYKRTINELVFNNHHDDNNSLICINKHGVV 135
Query: 76 RLLVKSTLPSAQKFERWVFEEV 97
+LL + +F W+ E+V
Sbjct: 136 QLLDNLDFKNKAEFITWIIEDV 157
>gi|322508787|gb|ADX04241.1| putative phage-related antirepressor [Acinetobacter baumannii
1656-2]
Length = 284
Score = 44.2 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 20 KDQNIWFVAKDVATALGYEN---SNEAINAHCKGVAKRYPLKTEGGIQK---VRIISEPD 73
+D IW + ++A ALGY+ ++ N + + + +RI S
Sbjct: 4 QDGQIWLSSGELAQALGYKQENAVSKIFNRNSDEFTENMTQIIDNPRLPNLGMRIFSLRG 63
Query: 74 VYRLLVKSTLPSAQKFERWVFEEVL 98
+ + + + A++F +WV +VL
Sbjct: 64 CHLIAIFARTAVAKQFRKWVL-DVL 87
>gi|317486788|ref|ZP_07945604.1| ankyrin-2 protein [Bilophila wadsworthia 3_1_6]
gi|316921951|gb|EFV43221.1| ankyrin-2 protein [Bilophila wadsworthia 3_1_6]
Length = 313
Score = 44.2 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 54/169 (31%), Gaps = 25/169 (14%)
Query: 25 WFVAKDVATALGYE--NSNEAINAHCKG--------VAKRYPLKTEGGIQKV-----RII 69
W A ++A ALGY NS I V + QK+ RI
Sbjct: 12 WVRAAELARALGYAQENSVSRIYRSNADEFTPDMTQVIEITAQSRNSSSQKIVDGRCRIF 71
Query: 70 SEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHL 129
S + L + + P A++F +W +V+ Y + P + + +
Sbjct: 72 SLRGCHLLAMFARTPVAKEFRKW-CLDVIE------KYGEQFPIDHPVTLNDAPISPEQR 124
Query: 130 EELAKQAGLKDNQLLLKVNRGVTK---ITGVDQLEAMDIKHLPSSDNDE 175
EL K + V R K + K +P S DE
Sbjct: 125 AELKLIVDSKAGMVPKAVQRRAYKEIWTRFNRHFHIAEYKQIPCSRMDE 173
>gi|114762691|ref|ZP_01442125.1| hypothetical protein 1100011001342_R2601_19759 [Pelagibaca
bermudensis HTCC2601]
gi|114544601|gb|EAU47607.1| hypothetical protein R2601_19759 [Roseovarius sp. HTCC2601]
Length = 43
Score = 44.2 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 4 ITPFEFESNKIRTIVDKDQNIWFVAKDVAT 33
I F+F+ N IR I+D D IWF AK V
Sbjct: 7 IPLFDFDGNSIR-IIDLDGTIWFPAKGVCD 35
>gi|255994153|ref|ZP_05427288.1| prophage antirepressor [Eubacterium saphenum ATCC 49989]
gi|255993821|gb|EEU03910.1| prophage antirepressor [Eubacterium saphenum ATCC 49989]
Length = 287
Score = 44.2 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 17/110 (15%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNE---AINAHCKGVAK- 53
M+ I F E N+IR++ D ++ W F D+ L EN + + K
Sbjct: 1 MNNEIKIF--EGNQIRSVWDNEKEEWYFSIIDILGVLTESENPRKYWSVLKTRLKKEGNE 58
Query: 54 --------RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +G + + ++R++ P A+ F+ W+ E
Sbjct: 59 LATICSQQKLKSPKDGKMYNTDVADMQGIFRIIQSVPSPKAEPFKMWLAE 108
>gi|228907466|ref|ZP_04071323.1| hypothetical protein bthur0013_16330 [Bacillus thuringiensis IBL
200]
gi|228851958|gb|EEM96755.1| hypothetical protein bthur0013_16330 [Bacillus thuringiensis IBL
200]
Length = 119
Score = 44.2 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 7 FEFESNKIRTIVDKDQNIWFVAKDVAT-ALGYENSNEAINAHCKGVAKRYPLKTEG--GI 63
F + +IR ++ FV D+ A+G +N I K +
Sbjct: 20 FLYNDKQIRAVLTTSNQFLFVGYDIGKNAIGIKNPYSLIENMDKRSKCSAVITFNQDINP 79
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQK--FERW 92
Q+ ++ ++ ++ ++ + F W
Sbjct: 80 QRYILVDLEGLHHMVYRARKVKVNRLDFIHW 110
>gi|223983714|ref|ZP_03633886.1| hypothetical protein HOLDEFILI_01167 [Holdemania filiformis DSM
12042]
gi|223964306|gb|EEF68646.1| hypothetical protein HOLDEFILI_01167 [Holdemania filiformis DSM
12042]
Length = 302
Score = 44.2 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 2 STITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNEAINAHCKGVAKRYP--- 56
++I F E KIRT+ D+++ W F DV L N + + K +
Sbjct: 16 NSIQLF--EDRKIRTVWDEEKEEWYFSVVDVVAVLSDSANPTDYLKKMRKRDEQLASYLG 73
Query: 57 --------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ G +KV + + R++ P A+ F W+
Sbjct: 74 TNCPQVEMTGSTGKKRKVLAANTEQILRIIQSIPSPKAEPFRLWL 118
>gi|167993640|ref|ZP_02574734.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205328317|gb|EDZ15081.1| putative bacteriophage protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
Length = 186
Score = 44.2 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 1 MSTITPFEFESNKI-RTIVDKDQNIWFVAKDVATALGYENSNEAI-----NAHCK----- 49
M+++ E + + + + IW + ++A ALGY+ ++A+ H +
Sbjct: 1 MNSVQKNELTFHNVTFNQISHENQIWLTSSELAKALGYKK-SDAVTQIYSRYHDEFTESM 59
Query: 50 GVAKRYPLKTEGGI--QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ + + G+ VR+ S + + + + P A++F RWV +
Sbjct: 60 STTLKMSVVRKTGVVDIPVRVFSLRGAHLISMFANTPVAKEFRRWVLD 107
>gi|254883593|ref|ZP_05256303.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319642339|ref|ZP_07996997.1| hypothetical protein HMPREF9011_02597 [Bacteroides sp. 3_1_40A]
gi|254836386|gb|EET16695.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317386062|gb|EFV66983.1| hypothetical protein HMPREF9011_02597 [Bacteroides sp. 3_1_40A]
Length = 286
Score = 43.8 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYENSNEA------INAHCKGVAKRYPLK--- 58
FE K+RT+ D ++ W F DV + L +S +A + K
Sbjct: 10 FEERKVRTVWDDEKEKWYFSIVDVVSVL--TDSVDATAYWRKLKQRLKEEGNETVTNCHG 67
Query: 59 -----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
T+G ++ + + R++ P A+ F++W+
Sbjct: 68 LKMKATDGKMRLTDVADTEQLLRIIQSIPSPKAEPFKQWMAH 109
>gi|20069900|ref|NP_613104.1| BRO-a [Mamestra configurata NPV-A]
gi|20043294|gb|AAM09129.1| BRO-a [Mamestra configurata NPV-A]
Length = 161
Score = 43.8 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
I E V L++ S + A++F++W +EE+
Sbjct: 30 HSNTVFIDEAGVMSLIMNSEISYAKEFKKWFYEEL 64
>gi|9631450|ref|NP_048267.1| ORF MSV196 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049803|gb|AAC97763.1| ORF MSV196 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 202
Score = 43.8 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 16 TIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGG-----IQKVRIIS 70
+ + +F AKD A+ L ++++ +AI + K I+
Sbjct: 4 YVAIFNNKSYFRAKDCASILEFKHTKDAIRHYVSNGNKIKFKNINIRSKKYIHPHTVFIN 63
Query: 71 EPDVYRLLVK 80
+ L++K
Sbjct: 64 NFGLIELILK 73
>gi|325299514|ref|YP_004259431.1| putative DNA repair ATPase [Bacteroides salanitronis DSM 18170]
gi|324319067|gb|ADY36958.1| putative DNA repair ATPase [Bacteroides salanitronis DSM 18170]
Length = 282
Score = 43.4 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 15/99 (15%)
Query: 9 FESNKIRTIVDKDQNIWFVA-KDVATAL---GYENSNEAINAHCKGVAKRYPLKT----- 59
FE K+RT+ D +Q W+ A DV L Y+ + +AK
Sbjct: 10 FEDKKVRTVWDDEQEKWYFAIVDVIAILTDNDYQGARNYWKVLKNRLAKEGNEPVTNCNR 69
Query: 60 ------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
+G +++ + ++R++ P A+ F++W
Sbjct: 70 LKLRAADGKMRQTDVADTEQLFRIIQSVPSPKAEPFKQW 108
>gi|240949783|ref|ZP_04754115.1| hypothetical protein AM305_00559 [Actinobacillus minor NM305]
gi|240295815|gb|EER46502.1| hypothetical protein AM305_00559 [Actinobacillus minor NM305]
Length = 281
Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 17/110 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSN-------EAINAHCKGV 51
M+ I F FE+++IR+I DK++ W F D+ AL G N I G+
Sbjct: 1 MNEIK-F-FENSQIRSIWDKEKEEWFFSVVDIVQALTGSSNPRRYWSDLKRKIRDDEGGI 58
Query: 52 AKRYPL------KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +G +++ ++R++ P A+ + W+ E
Sbjct: 59 ELYEKIVQLKLKAPDGKMRETDATDMQGIFRIIQSVPSPKAEPLKMWLAE 108
>gi|153955278|ref|YP_001396043.1| hypothetical protein CKL_2660 [Clostridium kluyveri DSM 555]
gi|219855701|ref|YP_002472823.1| hypothetical protein CKR_2358 [Clostridium kluyveri NBRC 12016]
gi|146348136|gb|EDK34672.1| Phage-related protein [Clostridium kluyveri DSM 555]
gi|219569425|dbj|BAH07409.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 250
Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 16/112 (14%)
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIKHLPSS 171
A A + ++ L ++ Q L + + ++ + K++ D +
Sbjct: 102 EAIMARALQFANQQLNQVRNQNKLLEGTIAVQNQQIAEMKPKVSYYDVV----------L 151
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + ++ + I + + A ++N+ L K+G+Q + G + K E+G
Sbjct: 152 NCKDLISTSAIAKDYG--KSAIWMNRYLNKKGVQFKQ-GGIWLLYQKYAEKG 200
>gi|229083178|ref|ZP_04215562.1| hypothetical protein bcere0023_57420 [Bacillus cereus Rock4-2]
gi|228700147|gb|EEL52749.1| hypothetical protein bcere0023_57420 [Bacillus cereus Rock4-2]
Length = 94
Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 142 QLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLK 201
L ++ +KIT +DQ+ +T++Q+ A LNK+L +
Sbjct: 1 MLTQQIAENASKITYLDQILQSQDT----------VTVSQVAADYGL--SAMKLNKILKE 48
Query: 202 RGLQVSKVSGGYRPTPKGEERG-GKMCDVPMQHVEGST 238
+Q KV+ + K + RG + V + H +G
Sbjct: 49 EKVQY-KVNNQWLLYSKHQNRGYTRSKTVDVVHTDGRR 85
>gi|330877265|gb|EGH11414.1| hypothetical protein Pgy4_10735 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 143
Score = 43.4 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 28 AKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQ 87
D+A +G A + L+ G Q+ +ISE V LLV +P +
Sbjct: 1 LADLARLMGKALDERATLKLDADQHREVWLQANGECQRQLMISESGVLALLVHHYVPENR 60
Query: 88 KFERWVFEEVLPTLRKTGSYSVEAPKLRATS 118
+W+ EVL L S +++ P++
Sbjct: 61 ALRQWLTHEVLTVLHDQQSVTLDNPRMSQLQ 91
>gi|149193880|ref|ZP_01870978.1| probable Death-on-curing family protein [Caminibacter
mediatlanticus TB-2]
gi|149135833|gb|EDM24311.1| probable Death-on-curing family protein [Caminibacter
mediatlanticus TB-2]
Length = 319
Score = 43.4 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 36/209 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKT 59
M+ I +F +I V D N IW ++A G I H + K +
Sbjct: 1 MNEII--KFIDGEIEVDVRFDGNTIWLRQDEIAKIFG--KDRSVITRHINNIFKDKEVDR 56
Query: 60 EGGIQKVRIISEPD---VYRL-LV-----KSTLPSAQKFERWVFEEVLPTLRKTGSYSVE 110
+ +QK+ + +Y L +V ++ A KF +W + + + K Y++
Sbjct: 57 DSNVQKMHFANSDKPVKLYSLDIVLAVGYRTNSAKAIKFRQWATKVLKDYILK--GYALN 114
Query: 111 APKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPS 170
R+ + EE K+ +++ + K ++++EA + +
Sbjct: 115 QK-----------RLKNNFEEFQKE---------IELLQKTIKNQNLNEIEAKGFLDIIT 154
Query: 171 SDNDEYLTITQIGERLNPPQRARFLNKLL 199
++ + Q E+ + + +L
Sbjct: 155 KYAKSWILLNQFDEQKLNIPKGKETKFIL 183
>gi|42779463|ref|NP_976710.1| phage antirepressor protein, putative [Bacillus cereus ATCC 10987]
gi|220930217|ref|YP_002507126.1| AntA/AntB antirepressor domain protein [Clostridium cellulolyticum
H10]
gi|42735379|gb|AAS39318.1| phage antirepressor protein, putative [Bacillus cereus ATCC 10987]
gi|220000545|gb|ACL77146.1| AntA/AntB antirepressor domain protein [Clostridium cellulolyticum
H10]
Length = 250
Score = 43.4 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 115 RATSASTVLRVHKHLEELAKQAGLKDNQLLLK---VNRGVTKITGVDQLEAMDIKHLPSS 171
A A + ++ L ++ KQ + + + ++ + K++ D +
Sbjct: 102 EAIMARALQIANQQLTQVRKQNKVLEGTIAVQNQQIAEMKPKVSYYDVV----------L 151
Query: 172 DNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ + ++ + I + + A ++N+ L K+G+Q + G + K E+G
Sbjct: 152 NCKDLISTSAIAKDYG--KSAIWMNRYLNKKGVQFKQ-GGIWLLYQKYAEKG 200
>gi|85702813|ref|ZP_01033917.1| hypothetical protein ROS217_18767 [Roseovarius sp. 217]
gi|85671741|gb|EAQ26598.1| hypothetical protein ROS217_18767 [Roseovarius sp. 217]
Length = 257
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 5 TPFEFESNKIRTIVDKDQNIWFVAKDVATAL-----GYENSNEAINAHCK 49
+ ++F+ + IR +++ D WFVA DV L G + +N K
Sbjct: 46 SLYDFKGHSIR-LIEIDNAPWFVAADVIRLLYGDTNGNSRAYSVVNDDEK 94
>gi|225156592|ref|ZP_03724925.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|224802824|gb|EEG21073.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 275
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYP---------- 56
FE K+R++ ++ + W F DV L G + + N + K
Sbjct: 8 FEDKKVRSVWNETEEKWYFSVTDVIEVLTGTDRPRKYWNDLKTKLKKEGSQLSDFIGQLK 67
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
++G + + RL+ P A+ F+ W+
Sbjct: 68 LTSSDGKSYLTDVADAKQLLRLIQSVPSPKAEPFKLWL 105
>gi|257440372|ref|ZP_05616127.1| prophage antirepressor [Faecalibacterium prausnitzii A2-165]
gi|257197218|gb|EEU95502.1| prophage antirepressor [Faecalibacterium prausnitzii A2-165]
Length = 298
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 16/106 (15%)
Query: 2 STITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG--------- 50
S+I F E KIRT D ++ W F DV + L G N + +
Sbjct: 8 SSIQLF--EDQKIRTAWDAEKEEWYFSIIDVISVLTGTANPRRYWSDLKRKLKTEGANEL 65
Query: 51 ---VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ + L +G K + + + R++ P A+ F+ W+
Sbjct: 66 YEKIVQLKMLSPDGKRYKTDVANTEQLLRIIQSIPSPKAEPFKAWL 111
>gi|284008129|emb|CBA74355.1| phage transcriptional regulator [Arsenophonus nasoniae]
Length = 193
Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 14/107 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
M+ + F+ ++ I + D IWF +A L Y + + + + P T+
Sbjct: 1 MNHVLTFK--THNIVPFNNGDGKIWFTGHHMAELLEYADVKSVNRLYNRNKNEFSPEMTQ 58
Query: 61 G------------GIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+VR+ S + L + + A+ +W+ +
Sbjct: 59 VVNLTSCNKNNDIQYNRVRLFSLRGAHLLGMLADTKIAKALRKWLLD 105
>gi|296390477|ref|ZP_06879952.1| hypothetical protein PaerPAb_20086 [Pseudomonas aeruginosa PAb1]
Length = 109
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ G ++ ++SE +Y LL + +A+ RWV VLP LR
Sbjct: 12 WLHDERHGPRQDCLVSESGLYALLWLAVPGAARSLRRWVSGSVLPRLR 59
>gi|223041506|ref|ZP_03611709.1| hypothetical protein AM202_0125 [Actinobacillus minor 202]
gi|223017764|gb|EEF16171.1| hypothetical protein AM202_0125 [Actinobacillus minor 202]
Length = 294
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYP---------- 56
FE ++R++ D +Q W F DV L + + + K
Sbjct: 6 FEHKEVRSVWDDEQEKWYFSIIDVIEVLTENSRPRKYWSDLKTKLKKEGSELSEKIGQLK 65
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L +G ++ + P + RL+ P A+ F+ W+
Sbjct: 66 MLSPDGKMRSTDVADVPQLLRLIQSIPSPKAEPFKLWL 103
>gi|114679900|ref|YP_758350.1| bro-d [Leucania separata nuclear polyhedrosis virus]
gi|39598631|gb|AAR28817.1| bro-d [Leucania separata nuclear polyhedrosis virus]
Length = 165
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 15/76 (19%)
Query: 28 AKDVATALGYENSNEA---INAHCKGVAKRYPL------------KTEGGIQKVRIISEP 72
K++A LGYEN A I K K L + + EP
Sbjct: 35 LKELAEFLGYENVKHAYALIPNEWKIKLKDLQLVRNSDHHVAPSTTPSNWQPETLFVLEP 94
Query: 73 DVYRLLVKSTLPSAQK 88
VY LL +S P A++
Sbjct: 95 GVYALLARSNKPMAKQ 110
>gi|310778827|ref|YP_003967160.1| phage regulatory protein, Rha family [Ilyobacter polytropus DSM
2926]
gi|309748150|gb|ADO82812.1| phage regulatory protein, Rha family [Ilyobacter polytropus DSM
2926]
Length = 228
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 3/120 (2%)
Query: 124 RVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
+ K L+EL L + + + +E + ++ T T+I
Sbjct: 96 EMEKQLKELYVPKSLPEALRAYADAVEEKEKQKLLAIEKQKTIDM-LVHENKLYTTTEIA 154
Query: 184 ERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKW 243
+ + + A LN L +R +Q K +G + K + G + KW
Sbjct: 155 KEMGF-KSAIALNIELGERKIQF-KANGTWVLYSKYSDLGYVSIKQNVLDTGKIVYDRKW 212
>gi|218258637|ref|ZP_03474965.1| hypothetical protein PRABACTJOHN_00620 [Parabacteroides johnsonii
DSM 18315]
gi|218225312|gb|EEC97962.1| hypothetical protein PRABACTJOHN_00620 [Parabacteroides johnsonii
DSM 18315]
Length = 277
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCK-GVAKRYPL 57
MS I F+ + KIR++ D+++ W F DV AL N + + K A L
Sbjct: 1 MSNIKLFQ--NKKIRSVWDEEEQQWYFSVVDVVGALTDSVNPTDYLKKMRKRDEALATYL 58
Query: 58 KTEGGIQKVRIISEPD------------VYRLLVKSTLPSAQKFERWV 93
T +V +++E ++R++ P A+ F+ W+
Sbjct: 59 GTN--CPQVEMMTETGKKRRTLAANVQALFRIIQSIPSPKAEPFKLWL 104
>gi|295401234|ref|ZP_06811206.1| hypothetical protein GeothDRAFT_2343 [Geobacillus
thermoglucosidasius C56-YS93]
gi|294976641|gb|EFG52247.1| hypothetical protein GeothDRAFT_2343 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 53
Score = 42.3 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 1 MSTIT-PFEFESNKIRTIVDKDQNIWFVA 28
M+ + F + +++RT+V KD +WFVA
Sbjct: 1 MNHLQQVFNYSGSQVRTMV-KDGEVWFVA 28
>gi|257428264|ref|ZP_05604662.1| phage antirepressor protein KilAC domain-containing protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257275105|gb|EEV06592.1| phage antirepressor protein KilAC domain-containing protein
[Staphylococcus aureus subsp. aureus 65-1322]
Length = 111
Score = 42.3 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Query: 159 QLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPK 218
+L+ + L TQI A+ LNKLL + LQ KV+ + +
Sbjct: 3 ELKPKADYVDEILKSTGTLATTQIAADYGI--SAQKLNKLLHEARLQ-RKVNKQWVLYSE 59
Query: 219 GEERG-GKMCDVPMQHVEGSTQ---QLKW 243
+ + +P+ +G Q +W
Sbjct: 60 HMGKSYTESDTIPIVRSDGREDTVLQTRW 88
>gi|258646473|ref|ZP_05733942.1| prophage antirepressor [Dialister invisus DSM 15470]
gi|260403879|gb|EEW97426.1| prophage antirepressor [Dialister invisus DSM 15470]
Length = 289
Score = 42.3 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEA---INAHCKGVAKRYPL------ 57
FE N+IR+I + ++ W F DV L +N + K L
Sbjct: 8 FEGNRIRSIWNNEKEEWYFSIIDVVNVLTDSKNPRRYWSDLKRKMKEEEGADQLYENIVQ 67
Query: 58 ----KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+G +++ + ++R++ P A+ F+ W+ E
Sbjct: 68 LKLKAPDGKMRETDVADMQGLFRIIQSIPSPKAEPFKMWLAE 109
>gi|160943730|ref|ZP_02090961.1| hypothetical protein FAEPRAM212_01225 [Faecalibacterium prausnitzii
M21/2]
gi|158444904|gb|EDP21907.1| hypothetical protein FAEPRAM212_01225 [Faecalibacterium prausnitzii
M21/2]
Length = 298
Score = 42.3 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG------------VAKR 54
FE KIRT D ++ W F DV + L G N + + + +
Sbjct: 13 FEDQKIRTAWDAEKEEWYFSIIDVISVLTGTANPRRYWSDLKRKLKAEGANELYEKIVQL 72
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L ++G K + + + R++ P A+ F+ W+
Sbjct: 73 KMLSSDGKRYKTDVANTEQLLRIIQSIPSPKAEPFKAWL 111
>gi|310827067|ref|YP_003959424.1| antirepressor [Eubacterium limosum KIST612]
gi|308738801|gb|ADO36461.1| antirepressor [Eubacterium limosum KIST612]
Length = 270
Score = 42.3 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 4/104 (3%)
Query: 121 TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQ-LEAMDIKHLPSSDNDEYLTI 179
++ +EE ++ L Q + V + V L A D+ + I
Sbjct: 116 RYIQAFNAMEEQLRRQALSMPQDKALLAAAVLEAEKVMAGLRAEADYAKRVLDSTALIPI 175
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
T I + A F+N+LL G+Q K + ++ G
Sbjct: 176 TGIAKDYG--MTADFMNRLLHSLGVQFKK-GKRWYLYEAWQDAG 216
>gi|257440721|ref|ZP_05616476.1| prophage antirepressor [Faecalibacterium prausnitzii A2-165]
gi|257196816|gb|EEU95100.1| prophage antirepressor [Faecalibacterium prausnitzii A2-165]
Length = 297
Score = 42.3 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG------------VAKR 54
FE KIRT D ++ W F DV + L G N + + + +
Sbjct: 13 FEDQKIRTAWDAEKEEWYFSIIDVISVLTGTANPRRYWSDLKRKLKAEGANELYEKIVQL 72
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L ++G K + + + R++ P A+ F+ W+
Sbjct: 73 KMLSSDGKRYKTDVANTEQLLRIIQSIPSPKAEPFKAWL 111
>gi|320157853|ref|YP_004190231.1| hypothetical protein VVM_00050 [Vibrio vulnificus MO6-24/O]
gi|319933165|gb|ADV88028.1| hypothetical protein VVMO6_03006 [Vibrio vulnificus MO6-24/O]
Length = 288
Score = 42.3 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
+S + L+ TQIGE+L A+ +N+LL + G G + T G GGK
Sbjct: 72 TSTQGKLLSATQIGEQLGL--NAKKMNQLLSEMGWMAKTERG-WEVTESGIRAGGKQ--- 125
Query: 230 PMQHVEGSTQQLKWNSNL 247
E L W+ ++
Sbjct: 126 -KGDGEEKPYYLLWHDSI 142
>gi|134287280|ref|YP_001110976.1| Bro15 [Heliothis virescens ascovirus 3e]
gi|133722188|gb|ABO37310.1| Bro15 [Heliothis virescens ascovirus 3e]
Length = 111
Score = 41.9 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 86 AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLL 145
A++ ++V+E +LPT+RKTG + ++ +T + Q L++ Q +
Sbjct: 2 AKQRMKYVYETILPTIRKTGKFDLKQQPSCSTDVINYDKKLADARMEVLQLKLENTQAIA 61
Query: 146 KVNRGVTKI 154
K VT++
Sbjct: 62 KYEARVTEL 70
>gi|158340951|ref|YP_001522118.1| KilA domain-containing protein [Acaryochloris marina MBIC11017]
gi|158311192|gb|ABW32804.1| KilA-N domain family protein [Acaryochloris marina MBIC11017]
Length = 282
Score = 41.9 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 159 QLEAMDIKHLPSSDNDE-YLTITQIGERLNPPQRARFLNKLLLKRGLQ--VSKVSG--GY 213
+ + + LPS +E T T++G+ L P A +NKLL G Q +
Sbjct: 174 AIMSEGLDALPSLPPEEQTYTPTELGQLLEPKLSAIRVNKLLEAAGYQESYRTARNVLKW 233
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSFL 252
+P K + + + + + L+W +++ L
Sbjct: 234 KPIDKAGDL--AVITLEEKSNGKPIESLRWKHSVVDVLL 270
>gi|237725214|ref|ZP_04555695.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265754274|ref|ZP_06089463.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229436480|gb|EEO46557.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|263234983|gb|EEZ20538.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 286
Score = 41.9 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYENSNEA------INAHCKGVAKRYPLK--- 58
FE K+RT+ D ++ W F DV + L +S +A + K
Sbjct: 10 FEERKVRTVWDDEKEKWYFSIVDVVSVL--TDSVDATAYWRKLKQRLKEEGNETVTNCHG 67
Query: 59 -----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+G ++ + + R++ P A+ F++W+
Sbjct: 68 LKMKAADGKMRLTDVADTEQLLRIIQSIPSPKAEPFKQWMAH 109
>gi|153807021|ref|ZP_01959689.1| hypothetical protein BACCAC_01298 [Bacteroides caccae ATCC 43185]
gi|149130141|gb|EDM21351.1| hypothetical protein BACCAC_01298 [Bacteroides caccae ATCC 43185]
Length = 283
Score = 41.9 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNE---AINAHCKGVAKRYPL------ 57
FE+ K+RTI D + W F DV L N + + K
Sbjct: 10 FETKKVRTIWDDKEEKWYFSIVDVVAVLTDSPNPRKYWSVLKTRLKKEGSELTTNCSQLK 69
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
+G + + + RL+ P A+ F++W
Sbjct: 70 MRSADGKMYLTDVADTQQLLRLIQSIPSPKAEPFKQW 106
>gi|237709642|ref|ZP_04540123.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229456278|gb|EEO61999.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 286
Score = 41.9 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYENSNEA------INAHCKGVAKRYPLK--- 58
FE K+RT+ D ++ W F DV + L +S +A + K
Sbjct: 10 FEERKVRTVWDDEKEKWYFSIVDVVSVL--TDSVDATAYWRKLKQRLKEEGNETVTNCHG 67
Query: 59 -----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+G ++ + + R++ P A+ F++W+
Sbjct: 68 LKMKAADGKMRLTDVADTEQLLRIIQSIPSPKAEPFKQWMAH 109
>gi|218892883|ref|YP_002441752.1| hypothetical protein PLES_41681 [Pseudomonas aeruginosa LESB58]
gi|218773111|emb|CAW28923.1| hypothetical protein PLES_41681 [Pseudomonas aeruginosa LESB58]
Length = 155
Score = 41.9 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 55 YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ G ++ ++SE +Y LL + +A+ RWV VLP LR
Sbjct: 58 WLHDERHGPRQDCLVSESGLYALLWLAVPGAARGLRRWVSGSVLPRLR 105
>gi|296113722|ref|YP_003627660.1| hypothetical protein MCR_1510 [Moraxella catarrhalis RH4]
gi|295921416|gb|ADG61767.1| hypothetical protein MCR_1510 [Moraxella catarrhalis RH4]
gi|326569166|gb|EGE19228.1| hypothetical protein E9Q_02478 [Moraxella catarrhalis BC1]
Length = 134
Score = 41.9 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEG 61
+ IT F F + +R ++D I FVAKD+ G ++A Y
Sbjct: 9 NPITLF-FNEHSVRVFKNRDGFIVFVAKDIKKIFG----DKACKELPSYYRPYYTDSKGQ 63
Query: 62 GIQKVRIISEPDVYRL-LVKSTL--PSAQKFERWVFEEVLPTL 101
G++ ++Y L ++ S P A F + +E L T+
Sbjct: 64 GLEYYYWRDLVELYALQVLHSRRPSPKAYYFINSLHDEFLHTI 106
>gi|9635312|ref|NP_059210.1| ORF62 [Xestia c-nigrum granulovirus]
gi|6175706|gb|AAF05176.1|AF162221_62 ORF62 [Xestia c-nigrum granulovirus]
Length = 211
Score = 41.9 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 25/94 (26%)
Query: 24 IWFVAKDVATALGYENSNEAINAHCK-------GVAKRY------------PLKTEGGIQ 64
++ A +A L ++ AI + KR+ P Q
Sbjct: 28 FYYEAYPIAKLLCNKHPELAIKNYVDRSCCKIYEELKRWFRPYCIFQSVGSPCSPGPNNQ 87
Query: 65 ------KVRIISEPDVYRLLVKSTLPSAQKFERW 92
I++ + L+ STLP A +F+RW
Sbjct: 88 PIHWQSNTLFINKDGIISLINNSTLPVAHEFKRW 121
>gi|303229348|ref|ZP_07316138.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302515884|gb|EFL57836.1| conserved hypothetical protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 280
Score = 41.9 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYEN--------SNEAINAHCKGVAKRY---- 55
FE ++IR++ D ++ W F DV +L N + ++ + +
Sbjct: 8 FEGSQIRSVWDNEREEWYFSVVDVIGSLTESNNPRDYWYRVKKRMSEEERSELSTFCRQL 67
Query: 56 -PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE-------EVL-PTL---RK 103
T+G K + ++R++ P A+ F+ W+ E E++ P L R
Sbjct: 68 KLKSTDGKSYKTDVADMQGIFRIIQSVPSPKAEPFKMWLAEVGKERIDEIIDPELTIDRA 127
Query: 104 TGSYSVEAPKLRATSAS-TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGVDQLE 161
SY+ + + ++V K L ++ + G+K + ++K +G+ E
Sbjct: 128 LESYARKGYSREWINQRLQAIQVRKELTDIWQDHGVKTGNEYAILTNEISKAWSGMTTRE 187
Query: 162 AMDIKHLPSSDNDEYLTITQI 182
D K L + + ++ T++
Sbjct: 188 YKDFKGLKKENLRDNMSTTEL 208
>gi|90592733|ref|YP_529686.1| 38.7K protein [Agrotis segetum nucleopolyhedrovirus]
gi|71559183|gb|AAZ38182.1| 38.7K protein [Agrotis segetum nucleopolyhedrovirus]
Length = 367
Score = 41.9 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 22 QNIWFVAKDVATALGYENSNEAINAHCKGVAKRYP----LKTEGGIQKVRIISEPDVYRL 77
+W A A LG++N+++A++ K + +++ V +L
Sbjct: 63 NEVWLAANPFAAGLGFKNTDQAVDEVVDARYKSTIDQLLFNNSNSSSNLVCVNKHGVLQL 122
Query: 78 LVKSTLPSAQKFERWVFEEV 97
L P+ +F W+ E V
Sbjct: 123 LDHIDFPNKAEFTAWLIENV 142
>gi|163932164|ref|YP_001642354.1| anti-repressor [Lactobacillus johnsonii prophage Lj771]
gi|163562118|gb|ABY26974.1| anti-repressor [Lactobacillus johnsonii prophage Lj771]
Length = 248
Score = 41.9 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 17/142 (11%)
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
Y +E + + V R L Q L++ L ++ K + +D +
Sbjct: 93 EYFLELERKWNDPQNVVQRAMDILHSENLQLKLENKSLNRQLEESNKKASYLDVILGTTD 152
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKG---EER 222
L TQI AR NKLL + +Q KV+G + +
Sbjct: 153 AML----------TTQIAMDYGY--SAREFNKLLHRMKIQ-HKVNGQWILYKAYMGKKYT 199
Query: 223 GGKMCDVPMQHV-EGSTQQLKW 243
KM +H + + W
Sbjct: 200 TTKMYSYTDKHGKDHAKPLTAW 221
>gi|313113016|ref|ZP_07798656.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624669|gb|EFQ07984.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 297
Score = 41.9 bits (97), Expect = 0.099, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVA-KDVATALGYENSNE------AINAHCKGVAKR 54
S+I F E KIRT D ++ W+ A DV L +S + + K
Sbjct: 8 SSIQLF--EDQKIRTAWDAEKEEWYFAIVDVIAVL--TDSADPQNYWRVLKKRLKDEGNE 63
Query: 55 YPLK--------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G +K + + + R++ P A+ F+ W+
Sbjct: 64 TITNCNGLKMTAPDGKKRKTDVANTEQLLRIIQSIPSPKAEPFKAWL 110
>gi|160945826|ref|ZP_02093052.1| hypothetical protein FAEPRAM212_03359 [Faecalibacterium prausnitzii
M21/2]
gi|158443557|gb|EDP20562.1| hypothetical protein FAEPRAM212_03359 [Faecalibacterium prausnitzii
M21/2]
Length = 296
Score = 41.5 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 2 STITPFEFESNKIRTIVDKDQNIWFVA-KDVATALGYENSNE------AINAHCKGVAKR 54
S+I F E KIRT D ++ W+ A DV L +S + + K
Sbjct: 8 SSIQLF--EDQKIRTAWDAEKEEWYFAIVDVIAVL--TDSADPQNYWRVLKKRLKDEGNE 63
Query: 55 YPLK--------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G +K + + + R++ P A+ F+ W+
Sbjct: 64 TITNCNGLKMTAPDGKKRKTDVANTEQLLRIIQSIPSPKAEPFKAWL 110
>gi|27367579|ref|NP_763106.1| hypothetical protein VV2_1199 [Vibrio vulnificus CMCP6]
gi|27359151|gb|AAO08096.1| hypothetical protein VV2_1199 [Vibrio vulnificus CMCP6]
Length = 288
Score = 41.5 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
+S + L+ TQIGE L A+ +N+LL + G G + T G GGK
Sbjct: 72 TSTQGKLLSATQIGELLGL--NAKKMNQLLSEMGWMAKTERG-WEVTESGIRAGGKQ--- 125
Query: 230 PMQHVEGSTQQLKWNSNL 247
E L W+ ++
Sbjct: 126 -KGDGEEKPYYLLWHDSI 142
>gi|37675687|ref|NP_936083.1| hypothetical protein VVA0027 [Vibrio vulnificus YJ016]
gi|37200226|dbj|BAC96053.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 288
Score = 41.5 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 170 SSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDV 229
+S + L+ TQIGE L A+ +N+LL + G G + T G GGK
Sbjct: 72 TSTQGKLLSATQIGELLGL--NAKKMNQLLSEMGWMAKTERG-WEVTESGIRAGGKQ--- 125
Query: 230 PMQHVEGSTQQLKWNSNL 247
E L W+ ++
Sbjct: 126 -KGDGEEKPYYLLWHDSI 142
>gi|9635364|ref|NP_059262.1| ORF114 [Xestia c-nigrum granulovirus]
gi|6175758|gb|AAF05228.1|AF162221_114 ORF114 [Xestia c-nigrum granulovirus]
Length = 427
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 39/209 (18%)
Query: 5 TPFEFESNKIRTIVDK----DQNIW--FVAKDVATALGYENSNEAIN-AHCKGV------ 51
F++ + + D ++ F A + +N I+ H V
Sbjct: 51 QVILFQNEPVEVVFSDKTGPDGLVYYFFEVTPFARLMNVDNPLSKIDSQHVIVVEEPVTA 110
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQK--FERWVFEEVLPTLRK------ 103
A + ++SE +Y+L+ + ++ W+F+ VLPT+++
Sbjct: 111 ADTNNWAVRNNTRSTTLVSEAGLYQLMFTGKPVTVRQGMVRNWLFDIVLPTVKQFTDTNT 170
Query: 104 -----TGSYSVE------------APKLRATSASTVLRVHKHLEE-LAKQAGLKDNQLLL 145
+YS + + + ++ +LR K + E +Q KD QL
Sbjct: 171 HYQVSHNNYSPQYEHLNLNQLNLNGVSIPSCVSNDILRAFKQIIESFERQLKQKDVQLER 230
Query: 146 KVNRGVTKITGVDQLEAMDIKHLPSSDND 174
++ D++ + L S N
Sbjct: 231 VCRTNDEQLLRKDEMLVYRERELESKTNQ 259
>gi|46199818|ref|YP_005485.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
gi|73919837|sp|Q72HH1|SYT_THET2 RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|46197445|gb|AAS81858.1| threonyl-tRNA synthetase [Thermus thermophilus HB27]
Length = 659
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 30/185 (16%)
Query: 16 TIVDKDQNIW-----FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
T+ D AKDVA ALG A+ A G LK KVR+++
Sbjct: 2 TVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGEL-YDLLKPLPQGAKVRLLT 60
Query: 71 EPD-----VYRLLVKSTLPSA-QKFERWVFEE-----------VLPTLRKTGSYSVEAPK 113
E D ++R + L A ++F F E V P + K Y +EAP
Sbjct: 61 EKDPEFQTLFRHTLAHVLAQAVKEF----FREKGYDPESVRLGVGPVIEKGFYYDIEAP- 115
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
S + + + E+ K+ L + +L + + G D + I +P +
Sbjct: 116 -EPLSDEDLPAIEAKMREILKR-DLPLRRFVLSREEALARYRGKDPYKTELILEIPEGEE 173
Query: 174 DEYLT 178
+
Sbjct: 174 ISFYQ 178
>gi|225018078|ref|ZP_03707270.1| hypothetical protein CLOSTMETH_02015 [Clostridium methylpentosum
DSM 5476]
gi|224949075|gb|EEG30284.1| hypothetical protein CLOSTMETH_02015 [Clostridium methylpentosum
DSM 5476]
Length = 242
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 8/80 (10%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR--------YPLKTEGGIQKVRII 69
D + K + AL Y + AI+ +R + T+G +
Sbjct: 8 TDGKGEFYMTRKQIGQALEYSDPQWAIDKLHDSHKERLDPFSVTTETVATDGKKYDTVLY 67
Query: 70 SEPDVYRLLVKSTLPSAQKF 89
+ VY + S P A F
Sbjct: 68 TSRGVYEICRYSHQPKANLF 87
>gi|291514532|emb|CBK63742.1| BRO family, N-terminal domain [Alistipes shahii WAL 8301]
gi|313157449|gb|EFR56870.1| conserved hypothetical protein [Alistipes sp. HGB5]
Length = 284
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVA-KDVATALGYENSNEA------INAHCKGVA 52
M+ + FE K+RT+ D + W+ A DV L S +A + K
Sbjct: 1 MTQKQAIQLFEERKVRTVWDDETEKWYFAIVDVVAIL--TESADAAAYWRKLKQRLKAEG 58
Query: 53 KRYP--------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
L +G ++ + ++RL+ P A+ F++W
Sbjct: 59 NETVTNCHGLKMLAADGKMRLTDVADTTQLFRLIQSIPSPKAEPFKQW 106
>gi|219870556|ref|YP_002474931.1| putative DNA repair ATPase [Haemophilus parasuis SH0165]
gi|219690760|gb|ACL31983.1| putative ATPase involved in DNA repair, putative prophage
antirepressor [Haemophilus parasuis SH0165]
Length = 226
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYP---------- 56
FE ++R++ D++Q W F DV L + + + K
Sbjct: 10 FEHKEVRSVWDEEQEKWYFSIIDVIEVLTENSRPRKYWSDLKTKLKKEGSELSEKIGQLK 69
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L +G ++ + P + RL+ P A+ F+ W+
Sbjct: 70 MLSPDGKMRLTDVADVPQLLRLIQSIPSPKAEPFKLWL 107
>gi|134287254|ref|YP_001110950.1| Bro11 [Heliothis virescens ascovirus 3e]
gi|133722162|gb|ABO37284.1| Bro11 [Heliothis virescens ascovirus 3e]
Length = 156
Score = 41.5 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 31/97 (31%), Gaps = 23/97 (23%)
Query: 25 WFVAKDVATALGYENSNEAINAHCK----------------------GVAKRYPLKTEGG 62
+ A+ VA LGYE++ AI H +
Sbjct: 41 YIPAEQVANILGYEDTTLAIERHVNIRLVRLWGHLMSMLKNSSDKTLKESYDALSVPSHW 100
Query: 63 IQKVRIISEPDVYRLLVKSTLP-SAQKFERWVFEEVL 98
R +S VY L+V S A F W F+ VL
Sbjct: 101 RFDTRFVSVVGVYALIVHSDDATRADDFHTWFFDSVL 137
>gi|331002120|ref|ZP_08325639.1| hypothetical protein HMPREF0491_00501 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411214|gb|EGG90630.1| hypothetical protein HMPREF0491_00501 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 291
Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 14/101 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEA---INAHCKGVAKRYPLK----- 58
FE N+IR++ D ++ W F DV L +N + + K
Sbjct: 8 FEGNQIRSLWDNEKEEWYFSVVDVVGVLTDSKNPRDYWYRVKKRMSEEEKSELSTFCRQL 67
Query: 59 ----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
++G ++R++ P A+ F+ W+ E
Sbjct: 68 KMESSDGKKYNTDAADIQGIFRIIQSIPSPKAEPFKMWLAE 108
>gi|260173401|ref|ZP_05759813.1| putative ATPase involved in DNA repair [Bacteroides sp. D2]
gi|315921673|ref|ZP_07917913.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313695548|gb|EFS32383.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 290
Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG--------VAKRYPLK 58
FE ++RT+ D +Q W F DV L N K V LK
Sbjct: 10 FEERRVRTVWDDEQEKWYFSIVDVVAVLTDSSNPQTYWRVLKKRLLSEGNETVTNCNGLK 69
Query: 59 TEGGIQKVRIISEPD---VYRLLVKSTLPSAQKFERW---VFEEVLPTLR 102
+ K+R+ D + RL+ P A+ F+ W V E L ++
Sbjct: 70 MQAADGKMRLTDVADTEQLLRLIQSIPSPKAEPFKLWMAKVASERLNQIQ 119
>gi|325281968|ref|YP_004254510.1| putative DNA repair ATPase [Odoribacter splanchnicus DSM 20712]
gi|324313777|gb|ADY34330.1| putative DNA repair ATPase [Odoribacter splanchnicus DSM 20712]
Length = 291
Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 18/107 (16%)
Query: 2 STITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-------GYENSNEAINAHCKGVAK 53
+ I F E K+RT+ D D+ W F DV L G N + +
Sbjct: 5 NAIKVF--EEKKVRTVWDSDKEEWYFSIVDVIEILTEQPNHQGARNYWKVLKNRMSKEGN 62
Query: 54 RYPLKT--------EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
+G ++ + ++RL+ P A+ F+ W
Sbjct: 63 ETVTNCNRLKLPAEDGKMRLTDVADTEQLFRLIQSIPSPKAEPFKLW 109
>gi|291166193|gb|EFE28239.1| prophage antirepressor [Filifactor alocis ATCC 35896]
Length = 289
Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAK----- 53
M I +E+ +IR++ D+++ W F DV L +N + + K +
Sbjct: 1 MDEIKL--YENKEIRSVWDEEKEEWYFSVVDVVGVLSESKNPTDYLKKMRKRDEQLAFYI 58
Query: 54 -----RYPLKTEGGIQKVRII-SEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +K+ G ++ + + D++R++ P A+ F+ W+ E
Sbjct: 59 GTNCPQVEMKSSSGKKRKILAGNMKDIFRIIQSIPSPKAEPFKLWLAE 106
>gi|164519312|ref|YP_001649099.1| BRO-G [Helicoverpa armigera granulovirus]
gi|163869498|gb|ABY47808.1| BRO-G [Helicoverpa armigera granulovirus]
Length = 382
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 39/209 (18%)
Query: 5 TPFEFESNKIRTIVDK----DQNIW--FVAKDVATALGYENSNEAIN-AHCKGV------ 51
F++ + + D ++ F A + +N I+ H V
Sbjct: 6 QVILFQNEPVEVVFSDKTGPDGLVYYFFEVTPFARLMNVDNPLSKIDSQHVIVVEEPVTA 65
Query: 52 AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQK--FERWVFEEVLPTLRK------ 103
+ ++SE +Y+L+ + ++ W+F+ VLPT+++
Sbjct: 66 NDTNTWAVRTNTRSTTLVSEAGLYQLMFTGKPVTVRQGMVRNWLFDIVLPTVKQFTDTNT 125
Query: 104 -----TGSYSVE------------APKLRATSASTVLRVHKHLEE-LAKQAGLKDNQLLL 145
+YS + + + ++ +LR K + E +Q KD QL
Sbjct: 126 HYQVSHNNYSPQYEHLNLNQLNLNGVNIPSCVSNDILRAFKQIIESFERQLKQKDVQLER 185
Query: 146 KVNRGVTKITGVDQLEAMDIKHLPSSDND 174
++ D++ + L S N
Sbjct: 186 VCRTNDEQLLRKDEMLVYRERELESKTNQ 214
>gi|307694269|ref|ZP_07636506.1| hypothetical protein RbacD_14819 [Ruminococcaceae bacterium D16]
Length = 297
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 17/100 (17%)
Query: 9 FESNKIRTIVDKDQNIWFVA-KDVATALGYENSNE------AINAHCKGVAKRYPLK--- 58
FE KIRT D ++ W+ A DV L +S + + K
Sbjct: 13 FEDQKIRTAWDAEKEEWYFAIVDVIAVL--TDSADPQNYWRVLKKRLKDEGNETITNCNG 70
Query: 59 -----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G +K + + + R++ P A+ F+ W+
Sbjct: 71 LKMTAPDGKKRKTDVANTEQLLRIIQSIPSPKAEPFKAWL 110
>gi|261492821|ref|ZP_05989368.1| hypothetical protein COK_1242 [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494814|ref|ZP_05991292.1| hypothetical protein COI_0606 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309525|gb|EEY10750.1| hypothetical protein COI_0606 [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311503|gb|EEY12659.1| hypothetical protein COK_1242 [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 281
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 38/241 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEA---INAHCKGVAKRY 55
M+ I F E+++IR++ D ++ W F D+ L N + K
Sbjct: 1 MNEIKLF--ENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYWSDLKRKIKDEEGGI 58
Query: 56 PL----------KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE-------EVL 98
L +G +++ ++R++ P A+ + W+ E E++
Sbjct: 59 ELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPLKMWLAEVGKERIDEII 118
Query: 99 -PTL---------RKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVN 148
P L K G YS E R + + ++ QAG + + N
Sbjct: 119 DPELTIDRALATYLKKG-YSREWINQRLQAIQVRKELTDTWQDHGVQAG---REFAILTN 174
Query: 149 RGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSK 208
+G+ + D K L + +T T++ + + + ++ +GL+ +K
Sbjct: 175 EITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAATKDIAQISHPQGLEENK 234
Query: 209 V 209
Sbjct: 235 T 235
>gi|227500240|ref|ZP_03930309.1| prophage antirepressor [Anaerococcus tetradius ATCC 35098]
gi|227217630|gb|EEI82939.1| prophage antirepressor [Anaerococcus tetradius ATCC 35098]
Length = 280
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYP-- 56
M+ FE+ KIRT +++ W F DV L +N + + +++
Sbjct: 1 MTNKMIKLFENKKIRTYWYEEKEEWYFSIIDVVEVLTESKNPRRYWSDLKRKISEESGNE 60
Query: 57 ----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L T+G ++ ++R++ P A+ F+ W+
Sbjct: 61 VYEKIVQLKMLATDGKMRTTDAADMEGIFRIIQSIPSPKAEPFKLWL 107
>gi|288560014|ref|YP_003423500.1| hypothetical protein mru_0757 [Methanobrevibacter ruminantium M1]
gi|288542724|gb|ADC46608.1| hypothetical protein mru_0757 [Methanobrevibacter ruminantium M1]
Length = 273
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Query: 2 STITPFEFESNKIRTIVDKD-QNIWFVAKDVATAL-GYENSNEAINAHCKGVAKRYPLKT 59
+ I F +IRT D++ + +F DV L N + + K + +
Sbjct: 4 NEIKLFN--DKQIRTKWDEEIGDYYFSVIDVIAVLTESSNPSRYWSELKKKICEEQGQPF 61
Query: 60 E-----------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
E G ++ + + + R++ P A+ F++W+
Sbjct: 62 ENIERLKLPAKDGKMRLTDVANTKQLLRIIQSVPSPKAEPFKQWL 106
>gi|209516336|ref|ZP_03265193.1| hypothetical protein BH160DRAFT_1470 [Burkholderia sp. H160]
gi|209503272|gb|EEA03271.1| hypothetical protein BH160DRAFT_1470 [Burkholderia sp. H160]
Length = 71
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISE 71
N +R I+ + WFVA++VA LGY K ++ G R I E
Sbjct: 2 NVVRDII--NGEPWFVAQEVAEMLGYAVQTWLFARMQKD--RKPQAPRRGCFFVARSIRE 57
Query: 72 PDVYR 76
++R
Sbjct: 58 FQIFR 62
>gi|332179036|gb|AEE14725.1| helicase domain-containing protein [Thermodesulfobium narugense DSM
14796]
Length = 1119
Score = 41.1 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 9/149 (6%)
Query: 84 PSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQL 143
S + F++ + E+VL + KTG Y ++ L +K ++E+ + +L
Sbjct: 606 QSIKNFKK-ITEDVLKFIEKTGRYILDRDLLEKI-------YNKDIDEIEEYLTKYAKRL 657
Query: 144 LLKVNRGVTKITGVDQLEAMD-IKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKR 202
+ + KI + + + D D + + I + LN + L+
Sbjct: 658 EKEEHSTNDKIYVLKEFKLKDKFIQDIKDDLNLFDNILKELAELNMVADDPKIKTLINNL 717
Query: 203 GLQVSKVSGGYRPTPKGEERGGKMCDVPM 231
++K S G P K + V
Sbjct: 718 KEVLNKTSNGKEPKRKAVIFTEYLDTVKY 746
>gi|313892834|ref|ZP_07826414.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442617|gb|EFR61029.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
F0412]
Length = 280
Score = 41.1 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 77/201 (38%), Gaps = 27/201 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEA---INAHCKGVAKRYPLK----- 58
FE ++IR++ D ++ W F DV +L N + + K
Sbjct: 8 FEGSQIRSVWDNEREEWYFSIVDVVGSLTESNNPRDYWYRVKKRMSEEEKSELSTICRQL 67
Query: 59 ----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE-------EVL-PTL---RK 103
+G ++ + ++R++ P A+ F+ W+ E E++ P L R
Sbjct: 68 KLKAPDGKMRLTDVADMQGIFRIIQSVPSPKAEPFKMWLAEVGKERIDEIIDPELTIDRA 127
Query: 104 TGSYSVEAPKLRATSAS-TVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGVDQLE 161
Y+ + + ++V K L + + G+K + ++K +G+ E
Sbjct: 128 LEGYARKGYSREWINQRLQAIQVRKELTDTWQNHGVKAGNEYAILTNEISKAWSGMTTRE 187
Query: 162 AMDIKHLPSSDNDEYLTITQI 182
D K L + + ++ T++
Sbjct: 188 YKDFKGLKKENLRDNMSTTEL 208
>gi|134287247|ref|YP_001110943.1| Bro8 [Heliothis virescens ascovirus 3e]
gi|133722155|gb|ABO37277.1| Bro8 [Heliothis virescens ascovirus 3e]
Length = 78
Score = 41.1 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1 MSTITP-FEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNE 42
MS + F + ++ +I D D +W +A A L Y +
Sbjct: 1 MSIVKVQFANQDLEVISIRDNDGQLWLLANPFARILEYSTTPR 43
>gi|150024581|ref|YP_001295407.1| hypothetical protein FP0483 [Flavobacterium psychrophilum JIP02/86]
gi|149771122|emb|CAL42589.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 276
Score = 41.1 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 36/201 (17%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNEAIN-----------AHCKGVAKRY 55
FE+ ++R++ D DQ W F DV L N N +
Sbjct: 10 FEAKQVRSVWDADQEKWFFSIVDVVGVLTTSENPNNYWKVLKNRLKKEGSQLVTDCNQLK 69
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV-----------------FEEVL 98
+G K + ++RL+ P A+ F+ W+ F+ ++
Sbjct: 70 MQSADGKFYKTDVADTEQIFRLIQSVPSPKAEPFKLWLAKMGSERIDEIEDPEIGFDRLM 129
Query: 99 PTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI-TGV 157
T K G YS + R S + V K L + ++ G+K Q + +TK TG+
Sbjct: 130 ETYLKKG-YSEKWINQRLKS----IEVRKELTDEWEKRGVKKGQEYAILTDEITKAWTGI 184
Query: 158 DQLEAMDIKHLPSSDNDEYLT 178
E +K L + +++T
Sbjct: 185 TTKEYKQLKDLKKENLRDHMT 205
>gi|218259452|ref|ZP_03475184.1| hypothetical protein PRABACTJOHN_00842 [Parabacteroides johnsonii
DSM 18315]
gi|218225106|gb|EEC97756.1| hypothetical protein PRABACTJOHN_00842 [Parabacteroides johnsonii
DSM 18315]
Length = 279
Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG-----------VAKRY 55
FE K+RT+ D + W F DV + L EN + + + +
Sbjct: 10 FEEKKVRTLWDDETEEWYFSVVDVVSVLTDSENPRRYWSDLKRKLSVEGSQLYAQIVQLK 69
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
+G K + + ++RL+ P A+ F+ W
Sbjct: 70 LPSADGKYYKTDVATTEQLFRLIQSIPSPKAEPFKLW 106
>gi|55981844|ref|YP_145141.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
gi|7388285|sp|P56881|SYT_THET8 RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|6689424|emb|CAB65483.1| threonyl-tRNA synthetase [Thermus thermophilus]
gi|55773257|dbj|BAD71698.1| threonyl-tRNA synthetase [Thermus thermophilus HB8]
Length = 659
Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 30/185 (16%)
Query: 16 TIVDKDQNIW-----FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIIS 70
T+ D AKDVA ALG A+ A G LK KVR+++
Sbjct: 2 TVYLPDGKPLELPEGATAKDVARALGEGWERRAVGAIVDGEL-YDLLKPLPQGAKVRLLT 60
Query: 71 EPD-----VYRLLVKSTLPSA-QKFERWVFEE-----------VLPTLRKTGSYSVEAPK 113
E D ++R + L A ++F F E V P + K Y +EAP
Sbjct: 61 EKDPEFQTLFRHTLAHVLAQAVKEF----FREKGYDPESVRLGVGPVIEKGFYYDIEAP- 115
Query: 114 LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDN 173
S + + + E+ K+ L + +L + + G D + + +P +
Sbjct: 116 -EPLSDEDLPAIEAKMREILKR-DLPLRRFVLSREEALARYRGKDPYKTELVLEIPEGEE 173
Query: 174 DEYLT 178
+
Sbjct: 174 ISFYQ 178
>gi|229915560|gb|ACQ90904.1| hypothetical protein [Pedinomonas minor]
gi|229915561|gb|ACQ90905.1| hypothetical protein [Pedinomonas minor]
Length = 195
Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 15/104 (14%)
Query: 1 MSTITPFEFE---SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPL 57
M++ + FE KI + D +W KDV L Y AI H ++
Sbjct: 1 MTSPIRY-FEHPTGTKISYFIKND-TVWISGKDVGKLLHYAKPQAAIQRHVSPCNQKRFF 58
Query: 58 KTEGGIQ------KVRIISEPDVYRLLVK-STLPSAQKFERWVF 94
+ G + + I+ + L K S P A W
Sbjct: 59 ELSEGFRGPKSQPQQIFINFEGLQELFQKNSAHPLAI---DWAT 99
>gi|71736724|ref|YP_273697.1| hypothetical protein PSPPH_1441 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71557277|gb|AAZ36488.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320327019|gb|EFW83033.1| hypothetical protein PsgRace4_24741 [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 136
Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 42 EAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
A + L+ G Q+ +ISE V LLV +P + +W+ EVL L
Sbjct: 8 RATLKLDADQHREVWLQANGECQRQLMISESGVLALLVHHYVPENRALRQWLTHEVLTVL 67
Query: 102 RKTGSYSVEAPKLRATS 118
S +++ P++
Sbjct: 68 HDQQSVTLDNPRMSQLQ 84
>gi|255021965|ref|ZP_05293973.1| Phage antirepressor protein [Acidithiobacillus caldus ATCC 51756]
gi|254968601|gb|EET26155.1| Phage antirepressor protein [Acidithiobacillus caldus ATCC 51756]
Length = 307
Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 11/142 (7%)
Query: 118 SASTVLRVHKHLEELAK-QAGLKDNQLLLKVNRGVTKITGVDQ--LEAMDIKHLPSSDND 174
++R + L E+ K G+ +NQ L G++ L + LP +
Sbjct: 132 DRDLIVRELRFLTEVQKTVPGMHENQAFLSALAYTELRLGIELTPLFPPEALALPCPHQE 191
Query: 175 EYLTITQIGERLNP-----PQRARFLNKLLLKRGLQVSKVSG--GYRPTPKGEERGGKMC 227
L T I R + +N++L G Q + PT KG
Sbjct: 192 VELRPTDIARRFGVVYASGKEDGATVNRILADLGFQTHTKGEPLDWTPTDKGWPFAVVKE 251
Query: 228 DVPMQHVEGST-QQLKWNSNLL 248
G T +QL W L+
Sbjct: 252 VPNRSLKAGRTIRQLFWRIGLI 273
>gi|257453047|ref|ZP_05618346.1| hypothetical protein F3_08311 [Fusobacterium sp. 3_1_5R]
gi|317059585|ref|ZP_07924070.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
gi|313685261|gb|EFS22096.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
Length = 278
Score = 40.7 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYPLK 58
M+ I +E+ ++R+I D++ W F DV L +N K +
Sbjct: 1 MNDIKL--YENKEVRSIWDEEHEEWLFSIVDVVGILTESKNPQVYWRVLKKRLVDEGNQT 58
Query: 59 -----------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+G ++ + ++R++ P A+ F+ W+ E
Sbjct: 59 VTNCNALKMKAKDGKMRLTDVTDMQGIFRIIQSIPSPKAEPFKMWLAE 106
>gi|284431204|gb|ADB84364.1| 38.7K protein [Apocheima cinerarium nucleopolyhedrovirus]
Length = 371
Score = 40.7 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 5 TPFEFES---NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG---------VA 52
F+F + +R IV + +W V D A +G++++ +AI + V
Sbjct: 52 QTFKFHNQFLFGLRYIV--AEELWMVGCDFAYGVGFDDAEKAIKSLVDERYVKFLNTIVF 109
Query: 53 KRYPLKTEGGIQKVRIISEPDVYRLL 78
K + V+ I++ ++LL
Sbjct: 110 KNNVAQDSNHAGNVKCINKTGAFQLL 135
>gi|150008502|ref|YP_001303245.1| putative DNA repair ATPase [Parabacteroides distasonis ATCC 8503]
gi|255014303|ref|ZP_05286429.1| putative ATPase involved in DNA repair [Bacteroides sp. 2_1_7]
gi|256841479|ref|ZP_05546986.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262383352|ref|ZP_06076488.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298376228|ref|ZP_06986184.1| prophage antirepressor [Bacteroides sp. 3_1_19]
gi|149936926|gb|ABR43623.1| conserved hypothetical protein, putative ATPase involved in DNA
repair [Parabacteroides distasonis ATCC 8503]
gi|256737322|gb|EEU50649.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262294250|gb|EEY82182.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298267265|gb|EFI08922.1| prophage antirepressor [Bacteroides sp. 3_1_19]
Length = 281
Score = 40.7 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNE---AINAHCKGVAKRYPLK----- 58
FE K+R I D +Q W F DV + L N + + K
Sbjct: 10 FEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSELTTNCSQLK 69
Query: 59 ---TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G + + ++RL+ P A+ F+ W+
Sbjct: 70 MQAADGKKYLTDVANTEQLFRLIQSVPSPKAEPFKLWI 107
>gi|237737063|ref|ZP_04567544.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
gi|229420925|gb|EEO35972.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
Length = 235
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 130 EELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPP 189
E+ K A K + L+ + + K+ + +L S + T T+I + L
Sbjct: 107 EKKLKVAQGKLPKTYLEALKELVKLEETKLSLENRVNNLVHSR--KLYTTTEIAKELGL- 163
Query: 190 QRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKW 243
+ A LN+LL + +Q KV+G + K ++ KW
Sbjct: 164 KSANALNQLLEEDKIQY-KVNGTWVLCSKYSDKEYVSIKQTELENGKIIYDRKW 216
>gi|298479834|ref|ZP_06998034.1| prophage antirepressor [Bacteroides sp. D22]
gi|298274224|gb|EFI15785.1| prophage antirepressor [Bacteroides sp. D22]
Length = 145
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYPL--------- 57
FE KIR + D + W F DV L E + K +
Sbjct: 10 FEDKKIRAVWDDQKEEWYFSIVDVIEVLTDSERPRKYWGDLKKKLKTEGSQLSEEIGQLK 69
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
++G + K + + ++RL+ P A+ F+ W
Sbjct: 70 LPSSDGKLYKTDVATTQQLFRLIQSIPSPKAEPFKMW 106
>gi|302131554|ref|ZP_07257544.1| hypothetical protein PsyrptN_09187 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 141
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 44 INAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
+ + L G + ++SE Y ++V + +W+ EV+P LR
Sbjct: 11 LRKLDADQHRMITLDLNGEAEPELMVSESGAYAMMVHHYHAENRGLRQWITNEVVPALR 69
>gi|169855118|ref|XP_001834229.1| TKL/LISK/LISK-DD1 protein kinase [Coprinopsis cinerea okayama7#130]
gi|116504737|gb|EAU87632.1| TKL/LISK/LISK-DD1 protein kinase [Coprinopsis cinerea okayama7#130]
Length = 607
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 10 ESNKIR-TIVDKDQN-IW-----FVAKDVATALGYENSNEAINAHCKGVAKRYPLK---- 58
E +R I DK++ W F A DVA AL Y ++ + I+ KG
Sbjct: 95 EGGNVRLYIHDKNKPFPWRLRMSF-ATDVARALAYLHARKCIHRDLKGENLLVTSNGRIK 153
Query: 59 -TEGGIQKVRIISEPDVYRLLV 79
T+ G ++ +E ++ RL
Sbjct: 154 VTDFGFARIAARNEEELRRLTF 175
>gi|9631397|ref|NP_048297.1| ORF MSV226 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049750|gb|AAC97710.1| ORF MSV226 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 109
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 13/92 (14%)
Query: 17 IVDKDQNIWFVAKDVATALGYE-------------NSNEAINAHCKGVAKRYPLKTEGGI 63
++ KD W+ D+ LGY+ N + K K K
Sbjct: 7 VIKKDNETWYNMLDIIKILGYKKKLHLHASLLNKNNKKKFYQLLTKNTLKNKYFKYTNVQ 66
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ I+E ++ +L+ S +A + +VF
Sbjct: 67 KNRIFINEVALFYILLSSKKENAIICKNYVFG 98
>gi|301309403|ref|ZP_07215345.1| prophage antirepressor [Bacteroides sp. 20_3]
gi|300832492|gb|EFK63120.1| prophage antirepressor [Bacteroides sp. 20_3]
Length = 193
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNE---AINAHCKGVAKRYPLK----- 58
FE K+R I D +Q W F DV + L N + + K
Sbjct: 10 FEERKVRAIWDDEQEEWYFSIVDVISILTDSPNPRKYWSVLKTRLKREGSELTTNCSQLK 69
Query: 59 ---TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G + + ++RL+ P A+ F+ W+
Sbjct: 70 MQAADGKKYLTDVANTEQLFRLIQSVPSPKAEPFKLWI 107
>gi|126662318|ref|ZP_01733317.1| prophage antirepressor [Flavobacteria bacterium BAL38]
gi|126625697|gb|EAZ96386.1| prophage antirepressor [Flavobacteria bacterium BAL38]
Length = 280
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 1 MSTITPFE-FESNKIRTIVDKDQNIWFVA-KDVATAL-GYENSNEAINAHCKGVAKRYP- 56
M+ ++ + FE K+RT D +Q W+V+ DV L + + + + K
Sbjct: 1 MTKVSAIQLFEDKKVRTAWDAEQEKWYVSIIDVIEILTDSDRPRKYWSDLKSKLIKEGSE 60
Query: 57 ----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G ++ + ++RL+ P A+ F+ W+
Sbjct: 61 LSDKIGQLKMQAPDGKMRLTDVADTEQLFRLIQSIPSPKAEPFKLWL 107
>gi|160885222|ref|ZP_02066225.1| hypothetical protein BACOVA_03220 [Bacteroides ovatus ATCC 8483]
gi|156109572|gb|EDO11317.1| hypothetical protein BACOVA_03220 [Bacteroides ovatus ATCC 8483]
Length = 287
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYPL--------- 57
FE KIR + D + W F DV L E + K +
Sbjct: 10 FEDKKIRAVWDDQKEEWYFSIVDVIEVLTDSERPRKYWGDLKKKLKTEGSQLSEEIGQLK 69
Query: 58 --KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
++G + K + + ++RL+ P A+ F+ W
Sbjct: 70 LPSSDGKLYKTDVATTQQLFRLIQSIPSPKAEPFKMW 106
>gi|288926747|ref|ZP_06420658.1| prophage antirepressor [Prevotella buccae D17]
gi|288336477|gb|EFC74852.1| prophage antirepressor [Prevotella buccae D17]
Length = 278
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 23/142 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNEAINAHCKGVAKRYP-- 56
MS I F E+ +IR+ D +Q W F DV L N + + K
Sbjct: 1 MSDIQLF--ENRRIRSHWDSEQEKWYFSIVDVIAVLTDSPNPRRYWSVLKTRLRKEGSEL 58
Query: 57 ---------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+G K + + RL+ P A+ F++W+ K GS
Sbjct: 59 ATNCSQLKMQSADGKYYKTDVADTEQLLRLIQSVPSPKAEPFKQWLA--------KVGSK 110
Query: 108 SVEAPKLRATSASTVLRVHKHL 129
++ + S L+ ++ L
Sbjct: 111 RLDQIQDPELSIQQALQDYRRL 132
>gi|165969143|ref|YP_001651043.1| 38.7K [Orgyia leucostigma NPV]
gi|164663639|gb|ABY65859.1| 38.7K [Orgyia leucostigma NPV]
Length = 381
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 12 NKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------GVAKRYPLKTEGGIQK 65
+R K +W V D A +GY ++A++ + + + + + +
Sbjct: 72 FSVRYFTLK-GQLWLVGYDFARGIGYRRPDDALSRYVEFKNAKSTETLLFGVVADSSTRS 130
Query: 66 VRIISEPDVYRLL 78
+ I+ +LL
Sbjct: 131 IVCINRAGALQLL 143
>gi|22549458|ref|NP_689231.1| hypothetical protein [Mamestra configurata NPV-B]
gi|22476637|gb|AAM95043.1| hypothetical protein [Mamestra configurata NPV-B]
Length = 134
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 63 IQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
I++ + L+ STLP A +F++W
Sbjct: 15 RPNTWFINKDGIISLINNSTLPVAHEFKKW 44
>gi|254410276|ref|ZP_05024056.1| hypothetical protein MC7420_8034 [Microcoleus chthonoplastes PCC
7420]
gi|196183312|gb|EDX78296.1| hypothetical protein MC7420_8034 [Microcoleus chthonoplastes PCC
7420]
Length = 297
Score = 40.4 bits (93), Expect = 0.29, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 125 VHKHLEEL-AKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH--LPSSDNDEYLTITQ 181
+ K LEE Q + +L + R + +Q + + + H +S +
Sbjct: 160 IAKWLEEAGLDQRAIASWKLNVLSQRFPVLASAANQAQQLLVTHSVEEASGMIASQVAEK 219
Query: 182 IGERLNPPQRARFLNKLLLKRGLQ--VSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQ 239
+ E+L +A +N L + G+Q S R T KG+ G M + S
Sbjct: 220 VSEQLGRNVKAAQVNAALHELGIQEWTKPGSRERRLTEKGKAYGRAMLAT-SKTNAWSGA 278
Query: 240 QLKWNSNLL 248
QL+W N++
Sbjct: 279 QLRWFDNVV 287
>gi|134287308|ref|YP_001111004.1| Bro19 [Heliothis virescens ascovirus 3e]
gi|133722216|gb|ABO37338.1| Bro19 [Heliothis virescens ascovirus 3e]
Length = 425
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVLRVHKH 128
+P+A+ F+ W E+LP L + G Y++ +AP V
Sbjct: 1 MPAAKAFQTWNHNELLPKLCQDGDYNMTRDAPTNIQIGMRAVHAATNK 48
>gi|114679894|ref|YP_758344.1| bro-a [Leucania separata nuclear polyhedrosis virus]
gi|39598625|gb|AAR28811.1| bro-a [Leucania separata nuclear polyhedrosis virus]
Length = 122
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 1 MSTITPFEFESNKIRTIVDKD--QNIWFVAKDVATALGYENSNEAI-NAHCKGVAKRYPL 57
MS I F I + D + +WF+A+ A L +++ + A+ + C ++
Sbjct: 1 MSVIKT-SFNKRPIEVYYEIDDRKQLWFLAEPFAHILKHDDPDRAVMSIVCDHNRCQFDQ 59
Query: 58 KTEGGIQKVR----------IISEPDVYRLLVKSTLPSAQ-KFERWVFEEVLP 99
+G + ++ +S + L+ + + +V ++LP
Sbjct: 60 IADGSVDRLDADGVINRNSLFVSGDGLIELINGTKSSQVVDELREYVELQLLP 112
>gi|240949496|ref|ZP_04753836.1| hypothetical protein AM305_11145 [Actinobacillus minor NM305]
gi|240296069|gb|EER46730.1| hypothetical protein AM305_11145 [Actinobacillus minor NM305]
Length = 282
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 16/108 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCK--------- 49
MS FE N+IR++ D +Q W F DV L NS + +
Sbjct: 1 MSNAIKL-FEGNQIRSVWDSEQEEWYFSVVDVVAVLTESANSRRYWSDLKRKLQVEEGAN 59
Query: 50 ----GVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ + ++G + K ++R++ P A+ F+ W+
Sbjct: 60 ELYEKIVQLKFKSSDGKMYKTDATDMQGIFRIIQSIPSPKAEPFKLWL 107
>gi|78356775|ref|YP_388224.1| hypothetical protein Dde_1732 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219180|gb|ABB38529.1| hypothetical protein Dde_1732 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 56
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 35 LGYENSNEAINAHCKGVAKRYPL-KTEGGIQKVRIISEPDVYRLLV 79
+G ++ +++ + P+ + G Q II+E +Y L
Sbjct: 1 MGLTDARKSVGLLDEDERNTVPVTDSLGREQHTFIINESGLYSLSF 46
>gi|227873933|ref|ZP_03992153.1| prophage antirepressor [Oribacterium sinus F0268]
gi|227840239|gb|EEJ50649.1| prophage antirepressor [Oribacterium sinus F0268]
Length = 295
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 18/103 (17%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYENSNE------AINAHCKGVAK-------- 53
FE N+IR++ D ++ W F D+ L +S + + K
Sbjct: 13 FEGNQIRSLWDNEKEEWYFSIADIIGVL--TDSKDFGAYWRKLKQRLKKEGSEVVTFCHA 70
Query: 54 -RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +G K + + ++R++ P A+ F+ W+ E
Sbjct: 71 LKLKSPKDGKSYKTDVANVQGIFRIIQSVPSPKAEPFKMWLAE 113
>gi|313114582|ref|ZP_07800091.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623101|gb|EFQ06547.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 298
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 16/106 (15%)
Query: 2 STITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKG--------- 50
S+I F E KIRT D ++ W F DV + L G N + +
Sbjct: 8 SSIQLF--EDQKIRTAWDAEKEEWYFSIIDVISVLTGTANPRRYWSDLKRKLKTEGANEL 65
Query: 51 ---VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ + L ++G K + + + R++ A+ F+ W+
Sbjct: 66 YEKIVQLKMLSSDGKRYKTDVANTEQLLRIIQSIPSKKAEPFKAWL 111
>gi|254523179|ref|ZP_05135234.1| hypothetical protein SSKA14_2312 [Stenotrophomonas sp. SKA14]
gi|219720770|gb|EED39295.1| hypothetical protein SSKA14_2312 [Stenotrophomonas sp. SKA14]
Length = 56
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 199 LLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSF 251
+++ GLQ K G + PT G+ + Q QLKW N+LV
Sbjct: 1 MVEHGLQ-EKRDGQWCPTEAGKAFAVLLQVHKKQQAGTDVLQLKWKENVLVLL 52
>gi|115298571|ref|YP_762424.1| 17 kDa [Spodoptera frugiperda ascovirus 1a]
gi|114416838|emb|CAL44669.1| 17 kDa [Spodoptera frugiperda ascovirus 1a]
Length = 152
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 19/131 (14%)
Query: 83 LPSAQKFERWVFEEVLPTLRKTGSYSV--EAPKLRATSASTVLRVH-------------- 126
+P+A+ F+ W E+LP L + G Y + +AP V
Sbjct: 1 MPAAKAFQTWNHNELLPKLCQDGEYKMARDAPTNIQIGMRAVHAATNNGAVAPWVNRNES 60
Query: 127 ---KHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIG 183
+ A +++ +L L++ + V K + ++ + + + E +
Sbjct: 61 GSVSQFDREFADAQIENFRLKLELTQTVAKYDAELAKRSQEMTQVVAKYDAELARVRTEL 120
Query: 184 ERLNPPQRARF 194
N A
Sbjct: 121 ALRNRDLAAER 131
>gi|9631533|ref|NP_048096.1| ORF MSV026 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049886|gb|AAC97846.1| ORF MSV026 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 190
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDVYRL 77
++ + ++F +D A L Y+N+ AI V+K +K E I++ + L
Sbjct: 10 INVNNCLYFKGEDCAKILKYKNTYGAIRN---NVSKNNKIKFE--KNNDIYINKLGLSEL 64
Query: 78 LVK 80
++K
Sbjct: 65 IIK 67
>gi|296274320|ref|YP_003656951.1| hypothetical protein Arnit_2796 [Arcobacter nitrofigilis DSM 7299]
gi|296098494|gb|ADG94444.1| conserved hypothetical protein [Arcobacter nitrofigilis DSM 7299]
Length = 270
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 23/142 (16%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYENSN----EAINAHCKGVAKRY 55
M I F ES +IR+ D++ +W F DV T L S + K
Sbjct: 1 MDKIQLF--ESKQIRSHWDENSELWYFSIVDVVTILTQSASPRKYWNKLKQRLKEEGNET 58
Query: 56 PLK--------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
++G ++ + + + RL+ P A+ F+ W+ K G
Sbjct: 59 VTNCHQLKMKASDGKMRLTDVATTEQLLRLIQSIPSPQAEPFKMWLA--------KVGYE 110
Query: 108 SVEAPKLRATSASTVLRVHKHL 129
+EA + S LR + L
Sbjct: 111 RIEAIQDPEKSIDAALRDYMKL 132
>gi|15078782|ref|NP_149532.1| 069L [Invertebrate iridescent virus 6]
gi|82013358|sp|O55709|069L_IIV6 RecName: Full=Putative Bro-N domain-containing protein 069L
gi|2738393|gb|AAB94420.1| 069L [Invertebrate iridescent virus 6]
Length = 230
Score = 40.0 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 23/105 (21%)
Query: 2 STITPFEF-ESNKIRTIVDKDQ------------NIWFVAKDVATALGYENSNEAINAHC 48
+ I E + +R I + D F K++A LG++ +A+ H
Sbjct: 7 NQIVKVENTNNGGLRAIFNLDGVTLDTPIMGTWDKPVFFGKEIAEFLGFKKPKDALQKHV 66
Query: 49 KG----------VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTL 83
K K K ++ + V L+ K+ L
Sbjct: 67 KPKYKTTLSKVLEKKLDTEPVSYNEGKRVLLYKEGVVELIKKTRL 111
>gi|32033658|ref|ZP_00133969.1| COG3617: Prophage antirepressor [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126207775|ref|YP_001053000.1| hypothetical protein APL_0289 [Actinobacillus pleuropneumoniae L20]
gi|126096567|gb|ABN73395.1| hypothetical protein APL_0289 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 106
Score = 39.6 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 17/108 (15%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCKGVAKRYP-- 56
M+ + F E+ +IR+ D ++ W F D+ AL N + + +
Sbjct: 1 MNELKLF--ENRQIRSTWDDEKEEWFFSIVDIVGALTESSNPRRYWSDLKRKITDEESGI 58
Query: 57 -----------LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ G ++R++ P A+ F+ W+
Sbjct: 59 ELYEKIVQLKMQSSNGKFYSTDAADMAGIFRIIQSIPSPKAEPFKLWL 106
>gi|164519253|ref|YP_001649040.1| BRO-C [Helicoverpa armigera granulovirus]
gi|163869439|gb|ABY47749.1| BRO-C [Helicoverpa armigera granulovirus]
Length = 218
Score = 39.6 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 22/87 (25%)
Query: 28 AKDVATALGYENSNEAINAHCK-------GVAKR--------------YPLKTEGGI-QK 65
A +A LG + AI G K P+ T
Sbjct: 32 AYPIAKLLGNKRPELAIRNCIDQSCCKTWGELKNLFNCGSLCIFQSIPPPVHTPVHWGSN 91
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERW 92
I+E V L+ STLP A KF+ W
Sbjct: 92 TLFINEEGVISLINSSTLPVANKFKWW 118
>gi|165969040|ref|YP_001650940.1| baculovirus repeated ORF b [Orgyia leucostigma NPV]
gi|164663536|gb|ABY65756.1| baculovirus repeated ORF b [Orgyia leucostigma NPV]
Length = 252
Score = 39.6 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 18/91 (19%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-------------HCKGVAKRYPL 57
K+ T++DK Q IWF L Y +S++ ++ H K V + L
Sbjct: 12 GVKLTTVMDKHQGIWFSGNACIKCLNYSDSDKTTDSDAYEKIYNRLPAEHVKTVDELELL 71
Query: 58 KTEGGIQ-----KVRIISEPDVYRLLVKSTL 83
T ++ I V +L+++S L
Sbjct: 72 PTHHAESTPLDATMKFIHYDSVIQLVLRSKL 102
>gi|9631042|ref|NP_047712.1| Ld-bro-g [Lymantria dispar MNPV]
gi|3822310|gb|AAC70261.1| Ld-bro-g [Lymantria dispar MNPV]
Length = 222
Score = 39.6 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 1 MSTITPFE--------FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG-- 50
M+ + FE FE + V D + K+ LGY+ N A K
Sbjct: 1 MTHLQHFEASLDDGVKFECWGV---VTPDGKVACKLKEFMDFLGYKEVNSAYKMIPKEWK 57
Query: 51 ------VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ + + EP +Y + +S P A+ ++++ V+PTL+K
Sbjct: 58 VYWHKLQDDLCVDSSVDLHPRNVFVYEPGMYAFMTRSGSPLAKWCMGFLYDVVVPTLKKN 117
>gi|78222289|ref|YP_384036.1| hypothetical protein Gmet_1071 [Geobacter metallireducens GS-15]
gi|78193544|gb|ABB31311.1| hypothetical protein Gmet_1071 [Geobacter metallireducens GS-15]
Length = 278
Score = 39.6 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 9 FESNKIRTIVDKDQNIWFVAK-DVATALGYEN-SNEAINAHCKGVAKRYPL--------- 57
F+S +IR ++ + +WF A DV AL + + K +
Sbjct: 8 FQSKEIRRLLVDN--VWFFAVVDVIAALTDSDKPRDYWYRMKKRELDASGIELSTFCRQL 65
Query: 58 ---KTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
++G + S ++R++ P A+ F+RW+
Sbjct: 66 KLESSDGKKYLTEMASTEGLFRIIQSIPSPKAEPFKRWL 104
>gi|237714803|ref|ZP_04545284.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262406922|ref|ZP_06083471.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294647732|ref|ZP_06725290.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294808259|ref|ZP_06767020.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|229445128|gb|EEO50919.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355625|gb|EEZ04716.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292636923|gb|EFF55383.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294444543|gb|EFG13249.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
Length = 287
Score = 39.6 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAH-----------CKGVAKRY 55
FE+ KIR + D + W F DV + L + + N +
Sbjct: 10 FENKKIRAVWDDQKEEWYFSIVDVVSVLTESVDGRKYWNKLKQRLKAEGSELVTNCHQLK 69
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
++G + K + + ++RL+ P A+ F+ W
Sbjct: 70 LPSSDGKLYKTDVATTQQLFRLIQSIPSPKAEPFKMW 106
>gi|190570708|ref|YP_001975066.1| Putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019714|ref|ZP_03335519.1| putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356980|emb|CAQ54368.1| Putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994755|gb|EEB55398.1| putative phage related protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 283
Score = 39.6 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 3 TITPFEFESNKIRTIVDKDQNIWFVAKDVATAL-GYENSNEAINA-------HCKGVAKR 54
I F+++ T V D W+V +V L G +N ++ + +G +
Sbjct: 11 DIETTAFDNSN-FTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDIGLSEGWGQF 69
Query: 55 YP---LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+KT+GG Q V + ++R+L ++F+RW+
Sbjct: 70 VTPLEIKTKGGKQNVNCTNVEGLFRILQSIPSKRVEQFKRWL 111
>gi|257468158|ref|ZP_05632254.1| hypothetical protein FulcA4_02402 [Fusobacterium ulcerans ATCC
49185]
gi|317062444|ref|ZP_07926929.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313688120|gb|EFS24955.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 201
Score = 39.2 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 53 KRYPLKTEGGIQKVR---IISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
K+ EGG+ K+R +E +Y + ++ P A++F R+ +L ++RK G
Sbjct: 60 KKKVPNLEGGVTKMREKRFFTESGIYEVSFLASTPRAREFRRF-AGTILKSVRK-GEMIP 117
Query: 110 EAPK----LRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+ P L ++ + ++L + +++ + K+T D L+ D+
Sbjct: 118 KLPADRWSLMEKKFDGIISTFEDRQDLLENLEGNTEKVVNLLEELKGKLTDFDNLK-EDV 176
Query: 166 KHLPSSDN 173
K L + N
Sbjct: 177 KALKKAVN 184
>gi|119356969|ref|YP_911613.1| prophage antirepressor [Chlorobium phaeobacteroides DSM 266]
gi|119354318|gb|ABL65189.1| prophage antirepressor [Chlorobium phaeobacteroides DSM 266]
Length = 294
Score = 39.2 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 14/99 (14%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNEA---INAHCKGVAKRYPLK----- 58
FE+ IR D+ W F DV L N + + K
Sbjct: 10 FENRPIRRYFDEATETWYFSIVDVIAILSESVNPRDYWFRMKVRVKSDDGLQLSTVCRQL 69
Query: 59 ----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+G ++ ++ + R++ P A+ F++W+
Sbjct: 70 KMKAPDGKMRATDCVNVEGLLRIIQSIPSPKAEPFKQWL 108
>gi|295084779|emb|CBK66302.1| BRO family, N-terminal domain. [Bacteroides xylanisolvens XB1A]
Length = 287
Score = 39.2 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAH-----------CKGVAKRY 55
FE KIR + D + W F DV + L + + N +
Sbjct: 10 FEDKKIRAVWDDQKEEWYFSIVDVVSVLTESVDGRKYWNKLKQRLKAEGSELVTNCHQLK 69
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
++G + K + + ++RL+ P A+ F+ W
Sbjct: 70 LPSSDGKLYKTDVATTQQLFRLIQSIPSPKAEPFKMW 106
>gi|282856107|ref|ZP_06265391.1| prophage antirepressor [Pyramidobacter piscolens W5455]
gi|282586034|gb|EFB91318.1| prophage antirepressor [Pyramidobacter piscolens W5455]
Length = 315
Score = 39.2 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAHCK-----------GVAKRY 55
FE+ KIR++ D+++ W F DV AL N + + K +
Sbjct: 11 FENRKIRSVWDEEREEWYFSVVDVVGALTDSANPTDYLKKMRKRDAELAAYLGTNCPQVE 70
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
L G +K + + RL+ P A+ F+ W+
Sbjct: 71 MLTATGKKRKTLAGNTEQILRLIQSIPSPKAEPFKLWL 108
>gi|134287268|ref|YP_001110964.1| Bro12 [Heliothis virescens ascovirus 3e]
gi|133722176|gb|ABO37298.1| Bro12 [Heliothis virescens ascovirus 3e]
Length = 158
Score = 39.2 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 23/46 (50%)
Query: 56 PLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTL 101
+ + + ++E + L+ +S A++F +V+ +VLP +
Sbjct: 87 TIVRPRWKKTTKFVNELGFHFLMGRSNRVVARRFSTYVYTKVLPAV 132
>gi|9631534|ref|NP_048095.1| ORF MSV024 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
gi|4049887|gb|AAC97847.1| ORF MSV024 ALI motif gene family protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 203
Score = 39.2 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKR-----YPLKTEGGIQKVRIISE 71
+++ + N++F A D+A L ++N AI K K+ I++
Sbjct: 9 VINYNDNLYFKAIDIAKLLKHKNIYRAIKYKISDCNKTLYKNISNTNLSYKKNKMVYINK 68
Query: 72 PDVYRLLVKSTL 83
+ L+ +ST
Sbjct: 69 LGLIELIKESTT 80
>gi|148368875|ref|YP_001257005.1| bro-3 [Spodoptera litura granulovirus]
gi|147883388|gb|ABQ51997.1| bro-3 [Spodoptera litura granulovirus]
Length = 67
Score = 38.8 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 10/42 (23%)
Query: 22 QNIWFV----------AKDVATALGYENSNEAINAHCKGVAK 53
+W V +A LGY+N +AI H K +
Sbjct: 15 GEVWIVEVEKDKFMYGGHGIAEFLGYKNPQKAIRDHVKPQWR 56
>gi|261349654|ref|ZP_05975071.1| prophage antirepressor [Methanobrevibacter smithii DSM 2374]
gi|288861612|gb|EFC93910.1| prophage antirepressor [Methanobrevibacter smithii DSM 2374]
Length = 292
Score = 38.8 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 15/105 (14%)
Query: 2 STITPFEFESNKIRTIVDKD-QNIWFVAKDVATAL-GYENSNEAINAHC----------- 48
+ I F+ E +IRT D + ++ +F DV L +N N +
Sbjct: 23 NEIKLFQNE--QIRTKWDSEIEDYYFSVIDVIAVLTESKNPNRYWSDLKIKLKDESGEPY 80
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
+ + K ++G ++ + + + R++ P A+ F++W+
Sbjct: 81 EDIVKLKMPASDGKMRLTDVANSKQLLRIIQSVPSPKAEPFKQWL 125
>gi|237745243|ref|ZP_04575724.1| predicted protein [Fusobacterium sp. 7_1]
gi|229432472|gb|EEO42684.1| predicted protein [Fusobacterium sp. 7_1]
Length = 200
Score = 38.4 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 57/147 (38%), Gaps = 38/147 (25%)
Query: 17 IVDKDQNIWFVAKDVATALGYENSN--------------------EAINAHCKGVAKRYP 56
+ K+ I ++A A+GY + + +++ GV K+
Sbjct: 22 VTIKNNEIEIEMGELAKAIGYTDVRGLKKLLDTNPELKNKEFSYLKKVDSIENGVVKK-- 79
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRA 116
++ R+ +E +Y + + + +A+KF R+V E++ RK +L
Sbjct: 80 -------REKRLFTEDGLYEVTMLANTENAKKFRRFV-RELMKKYRKN--------ELIL 123
Query: 117 TSASTVLRVHKHLEELAKQAGLKDNQL 143
+ + + L+E+ +D ++
Sbjct: 124 RTPTLLPAQQAQLDEMVGLIKARDGEI 150
>gi|22138091|gb|AAM93425.1|AF527603_8 ORF 8 [Spodoptera littoralis NPV]
Length = 346
Score = 38.4 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 11 SNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCK------GVAKRYPLKTEGGIQ 64
S IR ++ +D WFVA D A +G+++ ++ K GG
Sbjct: 50 SFYIRYVIVED-AAWFVAHDFARGIGHDDVRDSHRYVEKRYRRSLDQLLNNDQDYVGGDA 108
Query: 65 KVRIISEPDVYRLL 78
V I + +LL
Sbjct: 109 TVWCIDKHGCLQLL 122
>gi|29567119|ref|NP_818681.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
gi|29467895|dbj|BAC67285.1| baculovirus repeated ORF [Adoxophyes honmai NPV]
Length = 113
Score = 38.4 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 28 AKDVATALGYENSNEAINAHCKGVAK 53
AKDVA AL Y + +AI + K
Sbjct: 2 AKDVAAALKYVDCKQAIRINVDEKYK 27
>gi|152992331|ref|YP_001358052.1| death-on-curing family protein [Sulfurovum sp. NBC37-1]
gi|151424192|dbj|BAF71695.1| death-on-curing family protein [Sulfurovum sp. NBC37-1]
Length = 322
Score = 38.4 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 73/183 (39%), Gaps = 23/183 (12%)
Query: 1 MSTIT----PFEFESNKIRTIVDK-DQNIWFVAKDVATALGYENSNEAINAHCKG----- 50
M+ I+ ++ E+ +IR D ++ +W ++A G I+ H +
Sbjct: 1 MNKISDKISIYQTENGEIRLKEDITNETVWASLDEIAQIFG--RDKSVISRHIRNIFKDE 58
Query: 51 -------VAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRK 103
VAK ++G +V+ + + + + A F +W + + + +
Sbjct: 59 ELEEIAVVAKFATTASDGKTYQVKYYNLDMILSVGYRVNSKVATNFRKWATKTLKEHIVQ 118
Query: 104 TGSYSVEAPKLRATSASTVLRVHKHLEELAKQAG-LKDNQLLLKVNRGVTKITGVDQLEA 162
Y++ +L+ + LRV + ++ L++ A +K +L + G+D +
Sbjct: 119 --GYTINKERLQ-KNYDEFLRVVEDIKVLSQNADNVKAEDVLELIKSFSATWFGLDSYDR 175
Query: 163 MDI 165
++
Sbjct: 176 EEL 178
>gi|227358466|ref|ZP_03842795.1| phage protein [Proteus mirabilis ATCC 29906]
gi|227161346|gb|EEI46411.1| phage protein [Proteus mirabilis ATCC 29906]
Length = 255
Score = 38.4 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG------------VAKRYP 56
F+ N+I + D IWF + +A L Y+N N +
Sbjct: 68 FKGNEITPFDNGDNKIWFTSSQMAKLLEYKNEKSVTNLYNANKDEFSDDMTMVTETMTNG 127
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +KVRI S + + + + A+ RW+ +
Sbjct: 128 INNNLRKKKVRIFSVRGAHLIGMLANTDVAKSLRRWLLD 166
>gi|197284393|ref|YP_002150265.1| phage protein [Proteus mirabilis HI4320]
gi|194681880|emb|CAR41208.1| phage protein [Proteus mirabilis HI4320]
Length = 263
Score = 38.4 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 12/99 (12%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKG------------VAKRYP 56
F+ N+I + D IWF + +A L Y+N N +
Sbjct: 76 FKGNEITPFDNGDNKIWFTSSQMAKLLEYKNEKSVTNLYNANKDEFSDDMTMVTETMTNG 135
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
+ +KVRI S + + + + A+ RW+ +
Sbjct: 136 INNNLRKKKVRIFSVRGAHLIGMLANTDVAKSLRRWLLD 174
>gi|110636468|ref|YP_676675.1| hypothetical protein CHU_0041 [Cytophaga hutchinsonii ATCC 33406]
gi|110279149|gb|ABG57335.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 306
Score = 38.4 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 156 GVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
+ E + I + D + + T IG+ + ++ LN +L + GL ++ G+
Sbjct: 59 YIVWPENISISNGEQKDKAKLINATAIGK--HFSISSQRLNLILSELGLIEKDIAAGWEI 116
Query: 216 TPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLL 248
T G+ GG+ + H + W +L
Sbjct: 117 TKLGKSIGGRQFE----HETSGANYVLWPEGIL 145
>gi|89902664|ref|YP_525135.1| prophage antirepressor [Rhodoferax ferrireducens T118]
gi|89347401|gb|ABD71604.1| prophage antirepressor [Rhodoferax ferrireducens T118]
Length = 284
Score = 38.4 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 40/209 (19%)
Query: 4 ITPFEFESNKIRTIVDKD-QNIWFVAKDVATALGYENSNEAINAHCKGVAKR-------- 54
I P EF+ IR + D+D + WF DV L +SN A + + ++
Sbjct: 3 IFPAEFDGKAIRRVYDEDTETWWFSVVDVVQVL--TDSNNA-RRYWSDLKRKLAQEAGSE 59
Query: 55 ---------YPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+G ++ + + + RL+ P A+ + W+ K G
Sbjct: 60 QPYEKIVQLKLTSPDGKQRETDVATAETLLRLVQSVPSPKAEPIKLWLA--------KVG 111
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
++ A S A+Q + + + + +T ++L
Sbjct: 112 YERMQELADPALSLDR-----------ARQTWQQHGRSDKWIQQRMTGQETRNKLTDYWS 160
Query: 166 KHLPSSDNDEYLTITQIGERLNPPQRARF 194
+H ++ + I + + A
Sbjct: 161 EHDVKKGSEFAILTNIIHQEWSGVSVAEH 189
>gi|332180167|gb|AEE15855.1| hypothetical protein Trebr_0410 [Treponema brennaborense DSM 12168]
Length = 202
Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 13/98 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNEAINAH--------CKGVAKRYPLK 58
F+ +RT + D+ W F DV T L +N + V + LK
Sbjct: 11 FDKKNVRTSWNADEEEWYFSVVDVITVLTDSKNPTAYWRKLKQRLIAEGNETVTNCHGLK 70
Query: 59 TE---GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
G I+ ++ ++RL+ P A+ F+ W+
Sbjct: 71 MPAADGKIRLTDCLNTEQLFRLIQSIPSPKAEPFKLWL 108
>gi|76787962|ref|YP_330679.1| prophage Sa05 BRO domain-containing protein [Streptococcus
agalactiae A909]
gi|76563019|gb|ABA45603.1| prophage Sa05, BRO domain protein [Streptococcus agalactiae A909]
Length = 212
Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 1 MSTITPFE--FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKR 54
M+ I + F +I +D+++NI+ + +A GY+ S AI + KR
Sbjct: 1 MNIIKQVKSSFGELEIDFYLDRNRNIFVTIEQLAQGFGYK-SRNAIEKMIERQPYLKEKR 59
Query: 55 YPLK-----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ + T+G + R+ ++ ++ + + S + F +W+++ +
Sbjct: 60 FSVTDKLSATDGKQYETRLFNKRGIFEIGMLSKTEKGKIFRQWIYDHI 107
>gi|77407209|ref|ZP_00784181.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
H36B]
gi|77409250|ref|ZP_00785957.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
COH1]
gi|77172126|gb|EAO75288.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
COH1]
gi|77174184|gb|EAO77081.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
H36B]
Length = 212
Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 1 MSTITPFE--FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKR 54
M+ I + F +I +D+++NI+ + +A GY+ S AI + KR
Sbjct: 1 MNIIKQVKSSFGELEIDFYLDRNRNIFVTIEQLAQGFGYK-SRNAIEKMIERQPYLKEKR 59
Query: 55 YPLK-----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ + T+G + R+ ++ ++ + + S + F +W+++ +
Sbjct: 60 FSVTDKLSATDGKQYETRLFNKRGIFEIGMLSKTEKGKIFRQWIYDHI 107
>gi|307546765|ref|YP_003899244.1| hypothetical protein HELO_4175 [Halomonas elongata DSM 2581]
gi|307218789|emb|CBV44059.1| hypothetical protein HELO_4175 [Halomonas elongata DSM 2581]
Length = 199
Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIWFVAKDVAT 33
MS I PF+++ +R D W A D+A
Sbjct: 31 MSNIIPFKYQGRPVRFSTDG----WINATDIAK 59
>gi|67459789|ref|YP_247413.1| prophage antirepressor [Rickettsia felis URRWXCal2]
gi|67005322|gb|AAY62248.1| Prophage antirepressor [Rickettsia felis URRWXCal2]
Length = 274
Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATAL-GYENS-------NEAINAHCKGVAKRY----P 56
F+ IR I+ + WF DV AL N + +N V
Sbjct: 13 FKDKTIRRIL-HNNEWWFSVVDVVGALTDSSNPGAYWRKLKQRLNEEKSEVVTNCHGLKL 71
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
T+G + + R++ P A+ F++W+
Sbjct: 72 TATDGKKYITDCANTESLLRIIQSIPSPKAEPFKQWL 108
>gi|228962551|ref|ZP_04123889.1| hypothetical protein bthur0005_58500 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228797134|gb|EEM44408.1| hypothetical protein bthur0005_58500 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 45
Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 215 PTPKGEERGGKM-CDVPMQHVEGSTQQLKWNSNLLV 249
PT GE+ G K ++P S Q+KW+ ++
Sbjct: 3 PTQIGEQMGKKYGEEIPYTRNGHSGYQIKWSESVRD 38
>gi|160946728|ref|ZP_02093931.1| hypothetical protein PEPMIC_00686 [Parvimonas micra ATCC 33270]
gi|158447112|gb|EDP24107.1| hypothetical protein PEPMIC_00686 [Parvimonas micra ATCC 33270]
Length = 288
Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 21/112 (18%)
Query: 1 MST-ITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYENSNEA----------INAHC 48
M+ I F + NKIR+ D ++ W F D+ L NSN+A + A
Sbjct: 1 MNNEIKIF--DGNKIRSAWDNEKEEWYFSVVDIVGVL--TNSNDAGAYWRKLKQRLTAEG 56
Query: 49 KGVAK-----RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
V + +G + K + ++R++ P A+ F+ W+ E
Sbjct: 57 SEVVTFCHALKLKSHKDGKMYKTDVADIQGIFRIIQSIPSPKAEPFKMWLAE 108
>gi|229144730|ref|ZP_04273129.1| hypothetical protein bcere0012_18900 [Bacillus cereus BDRD-ST24]
gi|228638691|gb|EEK95122.1| hypothetical protein bcere0012_18900 [Bacillus cereus BDRD-ST24]
Length = 235
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
+++ P L T +L++ + +E K + Q I D++ ++
Sbjct: 106 AIQQPALPTTYKEALLQLVEQVEATEKLQAQLEEQA--------PAIEYHDKVLNIE--- 154
Query: 168 LPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYR 214
Y+TI + + L A+ LN++L + + G +
Sbjct: 155 -------GYMTIDETAKELGLR-SAQQLNQMLKGKKVIKRSSRGSWL 193
>gi|313678636|ref|YP_004056376.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
gi|312950688|gb|ADR25283.1| glycine--tRNA ligase [Mycoplasma bovis PG45]
Length = 458
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 8 EFESNKIRTIVD-KDQNIWFV-----AKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
EFE ++ D KD + F AKD AT LG ++ N I AH + Y T
Sbjct: 216 EFEQMELEVFHDPKDSDFLFNKYLYKAKDFATLLGIKDENVRIRAHEQDELSHYSSATS 274
>gi|269961705|ref|ZP_06176066.1| transcriptional regulator, MarR family [Vibrio harveyi 1DA3]
gi|269833570|gb|EEZ87668.1| transcriptional regulator, MarR family [Vibrio harveyi 1DA3]
Length = 158
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 4 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 39
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ +L+ + IK L S N T T I +RL N+L+ +R K
Sbjct: 40 -RAISELDNVTIKQLSSHTNMSQATATTILDRL-------ERNQLVERRRSVEDKRKVHA 91
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KG+E K P+Q S Q W +LL+S +Q
Sbjct: 92 VLTEKGQE-ALKQAPTPLQEHFISRFQKLEEWEQSLLLSSVQ 132
>gi|254363248|ref|ZP_04979296.1| possible DNA-binding protein [Mannheimia haemolytica PHL213]
gi|261492970|ref|ZP_05989513.1| putative DNA-binding protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495548|ref|ZP_05991994.1| putative DNA-binding protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|153095145|gb|EDN75692.1| possible DNA-binding protein [Mannheimia haemolytica PHL213]
gi|261308655|gb|EEY09912.1| putative DNA-binding protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311371|gb|EEY12531.1| putative DNA-binding protein [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 329
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 71/224 (31%), Gaps = 22/224 (9%)
Query: 1 MSTITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK- 58
M+ + + E K ++ + W +A ++ S + I+ H K + K L
Sbjct: 1 MNDLIIYNTEDGKSNVALLVVENEAWLTQNQLAEL--FDTSVQNISEHIKNILKDKELDE 58
Query: 59 -----------TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY 107
+G +V+ S + + + P A +F +W TLR
Sbjct: 59 NSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRKWANS----TLRTYLEK 114
Query: 108 SVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
R + L L E ++ + + KV + D+ +
Sbjct: 115 GFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKLSSDYDKTDKNTQMF 174
Query: 168 LPSSDNDEYLTITQ--IGERLNPPQRARFLNKLLLK-RGLQVSK 208
+ N IT+ E + A +N L +G V K
Sbjct: 175 FAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRK 218
>gi|310826223|ref|YP_003958580.1| hypothetical protein ELI_0601 [Eubacterium limosum KIST612]
gi|308737957|gb|ADO35617.1| hypothetical protein ELI_0601 [Eubacterium limosum KIST612]
Length = 157
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 169 PSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERG 223
+ E +++I + A+ NKLL +G+Q + + + + RG
Sbjct: 56 EAMGTTEAFPVSEIAADYG--RSAQAFNKLLRDQGIQYKR-GKRWYLYDRYQNRG 107
>gi|167856173|ref|ZP_02478911.1| possible prophage antirepressor [Haemophilus parasuis 29755]
gi|167852695|gb|EDS23971.1| possible prophage antirepressor [Haemophilus parasuis 29755]
Length = 146
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 57 LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFE 95
L+T GG Q+VR+ S + + + + A+ F +WV +
Sbjct: 7 LQTAGGKQQVRVFSLRGAHLIAMFARTKVAKDFRKWVLD 45
>gi|325661351|ref|ZP_08149977.1| hypothetical protein HMPREF0490_00710 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472300|gb|EGC75512.1| hypothetical protein HMPREF0490_00710 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 280
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 16/113 (14%)
Query: 1 MSTI---TPFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINA-HCKGVAKRYP 56
MS + T F + + + + +I + + AL Y N +AI H K +
Sbjct: 1 MSNLKLVTTENFGNLECNFYRNMNDDILLTREQIGQALEYANPAKAIQKIHLKHKDRLEN 60
Query: 57 LKTE------------GGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
L G + ++ + + S P A KF WV++ V
Sbjct: 61 LCFRMSEVRYPQNGGIGVNVETVYYTQRGIMEICRWSRQPLANKFMDWVWDIV 113
>gi|261491659|ref|ZP_05988241.1| Prophage antirepressor [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494222|ref|ZP_05990722.1| Prophage antirepressor [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261310125|gb|EEY11328.1| Prophage antirepressor [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312674|gb|EEY13795.1| Prophage antirepressor [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 272
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 15/106 (14%)
Query: 1 MSTITPFEFESNKIRTIVDKDQNIW-FVAKDVATALGYE-NSNEAINAH--------CKG 50
M I F E +R+ D++++ W F DV L + + +
Sbjct: 1 MQEIKLF--EQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYWRKLKQRLKAEGNET 58
Query: 51 VAKRYPLKTEGGIQKVRIISEPD---VYRLLVKSTLPSAQKFERWV 93
V + LK K+R+ D ++RL+ P A+ F++W+
Sbjct: 59 VTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQWL 104
>gi|164519354|ref|YP_001649141.1| BRO-J [Helicoverpa armigera granulovirus]
gi|163869540|gb|ABY47850.1| BRO-J [Helicoverpa armigera granulovirus]
Length = 66
Score = 37.3 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRY 55
VA AT L Y NSN+AI +H ++
Sbjct: 1 MVANPFATVLKYNNSNKAIRSHVSEHNQKN 30
>gi|67921963|ref|ZP_00515479.1| hypothetical protein CwatDRAFT_4551 [Crocosphaera watsonii WH 8501]
gi|67856179|gb|EAM51422.1| hypothetical protein CwatDRAFT_4551 [Crocosphaera watsonii WH 8501]
Length = 283
Score = 37.3 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 20/168 (11%)
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
E P T+ + L K + + + K A + K L
Sbjct: 119 EKPSPNTKIVPTIEEIDLVFAGLEK-LNIAPQLIQSAKLTAIAKTFPHLGTAAEESKQLL 177
Query: 170 SSDNDEY---LTITQIGER------LNPPQRARFLNKLLLKRGLQ----VSKVSG----G 212
+ N L+ T++G+ L+ P AR +N++L+ G Q VS G
Sbjct: 178 FAHNQVEEIPLSPTKLGKIIAEQLGLSKPISARRINQILITVGFQDSERVSNSKGKTKIQ 237
Query: 213 YRPTPKGEERGGKMCDVPMQHVEGSTQQLKWNSNLLVSFLQNELINTP 260
Y+ T GEE D H + + ++W +++ + + N
Sbjct: 238 YKLTKLGEEYARIQLDTARGHNK-TIYVIRWFKSVI-PIITEAMNNDQ 283
>gi|157113108|ref|XP_001651897.1| ketohexokinase [Aedes aegypti]
gi|108877899|gb|EAT42124.1| ketohexokinase [Aedes aegypti]
Length = 386
Score = 37.3 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 26 FVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPD 73
F+ KD A LGY++S EA+ K Y + G + + E D
Sbjct: 268 FLGKDFARFLGYKSSREAVYGLRKSHPGSYTIICPWGSSGISALDEKD 315
>gi|298488804|ref|ZP_07006832.1| Conserved domain protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298156722|gb|EFH97814.1| Conserved domain protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 114
Score = 36.9 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 60 EGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKL 114
G Q+ +ISE V LLV +P + +W+ EVL L S +++ P++
Sbjct: 4 NGECQRQLMISESGVLALLVHHYVPENRALRQWLTHEVLTVLHDQQSVTLDNPRM 58
>gi|9631079|ref|NP_047749.1| Ld-bro-h [Lymantria dispar MNPV]
gi|3822347|gb|AAC70298.1| Ld-bro-h [Lymantria dispar MNPV]
Length = 85
Score = 36.9 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 86 AQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSAS 120
A++ ++V+E +LP +RKTG ++ + R + S
Sbjct: 2 AKERMKYVYETILPAIRKTGKFTRDVINARMAAPS 36
>gi|330896963|gb|EGH28529.1| hypothetical protein PSYJA_05864 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 121
Score = 36.9 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 54 RYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLR 102
L G Q ++SE Y ++V + +W+ EV+P LR
Sbjct: 1 MITLDLHGEAQSELMVSESGAYAMMVHHYHAENRGLRQWLTHEVVPALR 49
>gi|153835450|ref|ZP_01988117.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148867994|gb|EDL67187.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 288
Score = 36.9 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ TQ+GE+L A+ +N+LL + G +SK G+ T G GG+
Sbjct: 79 YSATQLGEKL--KLNAKRMNQLLSELGW-ISKSEEGWSLTEAGVRAGGQQRTDKESQNT 134
>gi|69245157|ref|ZP_00603281.1| conserved hypothetical protein - phage associated [Enterococcus
faecium DO]
gi|257879623|ref|ZP_05659276.1| prophage antirepressor [Enterococcus faecium 1,230,933]
gi|257890290|ref|ZP_05669943.1| prophage antirepressor [Enterococcus faecium 1,231,410]
gi|260559714|ref|ZP_05831894.1| prophage Sa05 BRO domain-containing protein [Enterococcus faecium
C68]
gi|293560116|ref|ZP_06676620.1| phage antirepressor protein [Enterococcus faecium E1162]
gi|314938180|ref|ZP_07845485.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133a04]
gi|314943776|ref|ZP_07850511.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133C]
gi|314951145|ref|ZP_07854203.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133A]
gi|314994617|ref|ZP_07859877.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133B]
gi|314995573|ref|ZP_07860667.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133a01]
gi|68196000|gb|EAN10433.1| conserved hypothetical protein - phage associated [Enterococcus
faecium DO]
gi|257813851|gb|EEV42609.1| prophage antirepressor [Enterococcus faecium 1,230,933]
gi|257826650|gb|EEV53276.1| prophage antirepressor [Enterococcus faecium 1,231,410]
gi|260074382|gb|EEW62704.1| prophage Sa05 BRO domain-containing protein [Enterococcus faecium
C68]
gi|291605983|gb|EFF35413.1| phage antirepressor protein [Enterococcus faecium E1162]
gi|313590161|gb|EFR69006.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133a01]
gi|313591022|gb|EFR69867.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133B]
gi|313596624|gb|EFR75469.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133A]
gi|313597500|gb|EFR76345.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133C]
gi|313642527|gb|EFS07107.1| toxin-antitoxin system, toxin component, Bro domain protein
[Enterococcus faecium TX0133a04]
Length = 134
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 77 LLVKSTLPSAQKFERWVFEEVLPTLRK-TG--SYSVEAPKLRATSASTVLRVHKHLEELA 133
+ KS A+ F+ W+F +++ LR+ TG + V + + ++ + E
Sbjct: 1 MAFKSRKKEAEAFQDWIF-DIIKELRQSTGLEGFQVFRMLDKEHQKEAMTKLSHAITEPK 59
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDI 165
+K N + N+ V+ I G ++
Sbjct: 60 PVDYIKANVI---ANKAVSTIYGHSKMVKKKD 88
>gi|167855484|ref|ZP_02478248.1| inositol-5-monophosphate dehydrogenase [Haemophilus parasuis 29755]
gi|167853413|gb|EDS24663.1| inositol-5-monophosphate dehydrogenase [Haemophilus parasuis 29755]
Length = 281
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 18/102 (17%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL----GYENSNEAINAHCKGVAKRYPLKTEGGI 63
FE ++R++ D++Q W F DV L Y+ + K + +T
Sbjct: 10 FEHKEVRSVWDEEQEKWYFSIIDVIEILTEQPNYQGARNYWKVL-KSRLLKEGNETVTNC 68
Query: 64 QKVRIISEPD------------VYRLLVKSTLPSAQKFERWV 93
++++ +E + RL+ P A+ F+ W+
Sbjct: 69 NQLKMRAEDGKLRLTDVADVPQLLRLIQSIPSPKAEPFKLWL 110
>gi|224538217|ref|ZP_03678756.1| hypothetical protein BACCELL_03108 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520149|gb|EEF89254.1| hypothetical protein BACCELL_03108 [Bacteroides cellulosilyticus
DSM 14838]
Length = 283
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL-GYENSNE---AINAHCKGVAKRYP------- 56
FE K+RT D + W F DV + L + + + K
Sbjct: 10 FEEKKVRTAWDDETEEWYFSIVDVVSILTESVDGRKYWNKLKQRLKEEGNETVTNCHQLK 69
Query: 57 -LKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERW 92
L +G ++ + + ++RL+ P A+ F+ W
Sbjct: 70 MLSADGKMRFTDVATTEQMFRLIQSIPSPKAEPFKLW 106
>gi|109255375|ref|YP_654524.1| hypothetical protein COGV_gp103 [Choristoneura occidentalis
granulovirus]
gi|84683327|gb|ABC61237.1| unknown [Choristoneura occidentalis granulovirus]
Length = 93
Score = 36.9 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 9 FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRI 68
FE +I I++ + I+F +V L + + +K K +
Sbjct: 9 FEQRRIAVIINNNMQIYFKLVEVLRVL--------FDMCDHTYIDEFHIKVFDEFPKTKY 60
Query: 69 ISEPDVYRLLVKS-TLPSAQKFERW 92
++ + +L+ S AQ+F W
Sbjct: 61 VNLTGLKKLINLSPRRAIAQRFYDW 85
>gi|269959510|ref|ZP_06173892.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835697|gb|EEZ89774.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 276
Score = 36.5 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ TQ+GE+L A+ +N+LL + G +SK G+ T G GG+
Sbjct: 67 YSATQLGEKL--KLNAKRMNQLLSELGW-ISKSEEGWSLTEAGIRAGGQQRTDKESQNT 122
>gi|34497731|ref|NP_901946.1| hypothetical protein CV_2276 [Chromobacterium violaceum ATCC 12472]
gi|34103587|gb|AAQ59948.1| hypothetical protein CV_2276 [Chromobacterium violaceum ATCC 12472]
Length = 238
Score = 36.5 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 17 IVDKDQNIWFVAKDVATA--LGYENSNEAINAHCKGVAKRYPLKTEGGIQKVRIISEPDV 74
++ + + W VA +VA + L ++ +A+ G PL+ + V +SE ++
Sbjct: 25 VLRRPEGFWLVAAEVAASMKLEVKDLLKAL-----GEPLGRPLRLADEAEPVLCLSEGEL 79
Query: 75 YRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
+ + P A++ RW EE P L +
Sbjct: 80 DEVFRRIKKPGARRLRRWWLEETRPVLLQE 109
>gi|165969033|ref|YP_001650933.1| baculovirus repeated ORF a [Orgyia leucostigma NPV]
gi|164663529|gb|ABY65749.1| baculovirus repeated ORF a [Orgyia leucostigma NPV]
Length = 198
Score = 36.5 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 5/115 (4%)
Query: 66 VRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEAPKLRATSASTVLRV 125
R + P +Y LL P ++ + V E +LP +R+TG + + A T+ LR
Sbjct: 83 TRFVLAPGIYALLAHCFKPLERENAKHVREMILPAIRETGEFQINA-----TNCVQTLRA 137
Query: 126 HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTIT 180
KQA L D + L + E ++ + T
Sbjct: 138 QLLEARAEKQAILADYEEALSNYKSTLLAMDARVGEVEQHLKRRIAEPKPFTNET 192
>gi|156978198|ref|YP_001449104.1| hypothetical protein VIBHAR_07003 [Vibrio harveyi ATCC BAA-1116]
gi|156529792|gb|ABU74877.1| hypothetical protein VIBHAR_07003 [Vibrio harveyi ATCC BAA-1116]
Length = 276
Score = 36.5 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ TQ+GE+L A+ +N+LL + G +SK G+ T G GG+
Sbjct: 67 YSATQLGEKL--KLNAKRMNQLLSELGW-ISKSEEGWSLTEAGIRAGGQQRTDKESQNT 122
>gi|309809635|ref|ZP_07703491.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
gi|308169995|gb|EFO72032.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D]
Length = 330
Score = 36.5 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 25/204 (12%)
Query: 1 MSTITPFEF-------ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV-- 51
MS F+F E+ + + ++++IW A +A G S I H V
Sbjct: 1 MSN--EFQFLIYKTAEENVSVNAFI-QNESIWITANQMAILFGKSEST--IRKHINNVFD 55
Query: 52 -------AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKT 104
++ +G Q V + + + + A KF W + + K
Sbjct: 56 EGELNRENNTQKVRVDGVKQPVAFYNLDTIISVGYRVNSHKATKFRIWATSVLKEYMLK- 114
Query: 105 GSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKIT-GVDQLEAM 163
++++ +L+ A+ K L E + + ++ ++ + + D+ +
Sbjct: 115 -GFAMDDERLKQGKAAFGKDYFKELLERVRSIRASERRIWQQITDIFAECSIDYDKNAQI 173
Query: 164 DIKHLPSSDNDEYLTIT-QIGERL 186
N + IT Q G +
Sbjct: 174 THDFYSMIQNKFHYAITGQTGAEI 197
>gi|171689484|ref|XP_001909682.1| hypothetical protein [Podospora anserina S mat+]
gi|170944704|emb|CAP70815.1| unnamed protein product [Podospora anserina S mat+]
Length = 492
Score = 36.5 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 93 VFEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQ 142
V +VLP+LR G Y L+++ + + R + E Q
Sbjct: 153 VTSDVLPSLRPHGFYGTGQQTLKSSKVNEIERSASNTSEPTDDTAQSKKQ 202
>gi|163801516|ref|ZP_02195415.1| hypothetical protein 1103602000598_AND4_11624 [Vibrio sp. AND4]
gi|159175005|gb|EDP59805.1| hypothetical protein AND4_11624 [Vibrio sp. AND4]
Length = 288
Score = 36.5 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 177 LTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVE 235
+ TQ+GE+L A+ +N+LL + G G + T G GG+
Sbjct: 79 YSATQLGEKLEL--NAKRMNQLLSELGWIFKSEDG-WSLTEAGIRAGGQQRTDKESQNT 134
>gi|76799198|ref|ZP_00781377.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
18RS21]
gi|77410863|ref|ZP_00787220.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
CJB111]
gi|76585452|gb|EAO62031.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
18RS21]
gi|77163081|gb|EAO74035.1| BRO family, N-terminal domain protein [Streptococcus agalactiae
CJB111]
Length = 212
Score = 36.5 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 1 MSTITPFE--FESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV----AKR 54
M+ I + F +I +D+++NI+ + +A GY+ S AI + KR
Sbjct: 1 MNIIKQVKSSFGELEIDFYLDRNRNIFVTIEQLAQRFGYK-SRNAIEKMIERQPYLKEKR 59
Query: 55 YPLK-----TEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEV 97
+ + T+G + R+ ++ ++ + + S + F +W+++ +
Sbjct: 60 FSVTDKLSATDGKQYETRLFNKRGIFEIGMLSKTEKGKIFRQWIYDHI 107
>gi|119510225|ref|ZP_01629362.1| hypothetical protein N9414_13962 [Nodularia spumigena CCY9414]
gi|119465074|gb|EAW45974.1| hypothetical protein N9414_13962 [Nodularia spumigena CCY9414]
Length = 202
Score = 36.5 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 182 IGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGSTQQL 241
+ N R +N+LL + GL K S T + ++ G +CD+ S L
Sbjct: 136 LANEFNIQISDRHINRLLKQMGLSTKKKSSSPPETEQTKDAGITICDL----QSHSEPNL 191
Query: 242 KWNSNLL 248
W+ NL+
Sbjct: 192 HWSLNLI 198
>gi|78357838|ref|YP_389287.1| hypothetical protein Dde_2796 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220243|gb|ABB39592.1| hypothetical protein Dde_2796 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 277
Score = 36.5 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 18 VDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAK-----RYPLKTEGGIQKVRIIS 70
V +D +F + V ALG + + + V K + +G K+ ++
Sbjct: 25 VTEDGKAYFSPRHVCDALGIAWTGQRVKIMDDDVLKLVVKEIFTTGRDGKTYKMSMLP 82
>gi|150002698|ref|YP_001297442.1| putative DNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294776953|ref|ZP_06742414.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides
vulgatus PC510]
gi|149931122|gb|ABR37820.1| putative DNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294449201|gb|EFG17740.1| toxin-antitoxin system, toxin component, Fic family [Bacteroides
vulgatus PC510]
Length = 332
Score = 36.5 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 20/148 (13%)
Query: 2 STITPFEFESNKIRT-IVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I ++ ++ IR + D+++W +A Y + + I+ H + K L TE
Sbjct: 5 NKIILYQDDNEIIRVSVRFSDEDLWLTQNQLAEI--YCTTQQNISQHVDNIYKDGELFTE 62
Query: 61 GGIQKVRIISEPD---------------VYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+K ++ + V L + A +F RW + + ++K
Sbjct: 63 ATNKKFLLVRQEGNRQVRRNIDHYNLDMVIALGYRVQSQVATRFRRWATQRLHEYIQK-- 120
Query: 106 SYSVEAPKLRATSASTVLRVHKHLEELA 133
++++ +L+ + + + ++
Sbjct: 121 GFAMDDERLKQGGNRYFRELLQRIRDIR 148
>gi|308095629|ref|ZP_05907254.2| transcriptional regulator, MarR family [Vibrio parahaemolyticus
Peru-466]
gi|308125803|ref|ZP_05777458.2| transcriptional regulator, MarR family [Vibrio parahaemolyticus
K5030]
gi|308126311|ref|ZP_05909179.2| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AQ4037]
gi|308086599|gb|EFO36294.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
Peru-466]
gi|308106849|gb|EFO44389.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AQ4037]
gi|308111487|gb|EFO49027.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
K5030]
Length = 192
Score = 36.1 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 38 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 73
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+++L+ + IK L + N T T I +RL N+L+ +R K
Sbjct: 74 -RAINELDNVTIKQLSNHTNMSQATATTILDRL-------ERNQLVERRRSVEDKRKVHA 125
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KGEE + P+Q + Q W LL+S +Q
Sbjct: 126 VLTEKGEE-ALRQAPTPLQEHFINRFQKLEEWEQTLLLSSVQ 166
>gi|312897512|ref|ZP_07756932.1| toxin-antitoxin system, toxin component, Fic family [Megasphaera
micronuciformis F0359]
gi|310621364|gb|EFQ04904.1| toxin-antitoxin system, toxin component, Fic family [Megasphaera
micronuciformis F0359]
Length = 329
Score = 36.1 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 66/198 (33%), Gaps = 19/198 (9%)
Query: 1 MSTITPFEFESNK--IRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGVAKRYPLK 58
M I + E + +R + KD +W +A ++ + I+ H V L
Sbjct: 1 MDNIIIYNTEDGQTNVR-LYAKDGTVWMTQAQMAEL--FQKNTSTISRHLSSVFDERELD 57
Query: 59 TEGGIQKVRIISEP---DVYRL------LVKSTLPSAQKFERWVFEEVLPTLRKTGSYSV 109
+ ++ ++I + Y L + P +F RW L + G + +
Sbjct: 58 EKSNLRFMQIANSDKPVSFYSLSAILAVGFRVRSPRGTQFRRW-ANTTLKEYMQKG-FVI 115
Query: 110 EAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLP 169
+ +L+ L E + + + K+ + + D+ + ++
Sbjct: 116 DDDRLKNPDGRP--DYFDELLERIRDIRASEKRFYQKLRDLFSLSSDYDKTDKTTLQFFA 173
Query: 170 SSDNDEYLTIT-QIGERL 186
+ N +T + L
Sbjct: 174 ETQNKLIYGVTGKTAADL 191
>gi|119946718|ref|YP_944398.1| hypothetical protein Ping_3102 [Psychromonas ingrahamii 37]
gi|119865322|gb|ABM04799.1| hypothetical protein Ping_3102 [Psychromonas ingrahamii 37]
Length = 107
Score = 36.1 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 161 EAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRP 215
E + + E+ +G+ A +NK L K G V K GG+ P
Sbjct: 15 EPESLYQEWLKKHKEWFNAADLGKEFTTKLSAIKVNKFLEKHGYIVRK-DGGWIP 68
>gi|307711154|ref|ZP_07647576.1| hypothetical protein SMSK321_1576 [Streptococcus mitis SK321]
gi|307617116|gb|EFN96294.1| hypothetical protein SMSK321_1576 [Streptococcus mitis SK321]
Length = 331
Score = 36.1 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 66/201 (32%), Gaps = 30/201 (14%)
Query: 1 MSTITPFEF---ESNKIRTIVDKDQNIWFVAKDVATALGYENSNEAINAHCKGV------ 51
M+ + + ++ +++ K + IW K++A AI+ H K +
Sbjct: 1 MNELQFLIYTADNDSETASVIIKGETIWASQKEMARLFDVGVP--AISKHLKNIFEEGEL 58
Query: 52 ------AKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG 105
+K T+G + + + + + A +F +W VL
Sbjct: 59 EEDSVISKMETTATDGKNYLITYYNLDAIISVGYRVNSQKATRFRQWATS-VL------R 111
Query: 106 SYSVEAPKLRATSASTVLRVHKH-----LEELAKQAGLKDNQLLLKVNRGVTKITGVDQL 160
Y ++ + + + L E + + ++ L++ +I+
Sbjct: 112 EYMIKGFAMDDNRLKQGENLLEKDYFRELLERVRSIRASERRIWLQITDIFAEISIDYDP 171
Query: 161 EAMDIKHLPS-SDNDEYLTIT 180
++ K + N + IT
Sbjct: 172 QSTLTKQFYADVQNKFHYAIT 192
>gi|153835529|ref|ZP_01988196.1| transcriptional regulator, MarR family [Vibrio harveyi HY01]
gi|156974168|ref|YP_001445075.1| hypothetical protein VIBHAR_01882 [Vibrio harveyi ATCC BAA-1116]
gi|148867899|gb|EDL67116.1| transcriptional regulator, MarR family [Vibrio harveyi HY01]
gi|156525762|gb|ABU70848.1| hypothetical protein VIBHAR_01882 [Vibrio harveyi ATCC BAA-1116]
Length = 158
Score = 35.7 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 4 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 39
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ +L+ + IK L S N T T I +RL N+ + +R K
Sbjct: 40 -RAISELDNVTIKQLSSHTNMSQATATTILDRL-------ERNQFVERRRSVEDKRKVHA 91
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KG+E K P+Q + Q W +LL+S +Q
Sbjct: 92 LLTEKGQE-ALKQAPTPLQEHFINRFQKLEEWEQSLLLSSVQ 132
>gi|308094813|ref|ZP_05892067.2| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AN-5034]
gi|308093448|gb|EFO43143.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
AN-5034]
Length = 167
Score = 35.7 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 13 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 48
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+++L+ + IK L + N T T I +RL N+L+ +R K
Sbjct: 49 -RAINELDNVTIKQLSNHTNMSQATATTILDRL-------ERNQLVERRRSVEDKRKVHA 100
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KGEE + P+Q + Q W LL+S +Q
Sbjct: 101 VLTEKGEE-ALRQAPTPLQEHFINRFQKLEEWEQTLLLSSVQ 141
>gi|119586102|gb|EAW65698.1| ninein (GSK3B interacting protein), isoform CRA_g [Homo sapiens]
Length = 2077
Score = 35.7 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 79 VKSTLPSAQKFERWVFEEV---LPTLRKTGSYSVEAPKLRATSASTVLR--VHKHLEELA 133
++S L A+K + + EV + + Y++ L+ + K E++
Sbjct: 348 LRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRKEREQIL 407
Query: 134 KQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRAR 193
+QAG + +L ++ + T+ + A+ +K +N+ ++ E +
Sbjct: 408 QQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEKLAEYFGDLDPSS 467
Query: 194 FLNKLLLKRGLQVSKV 209
L +R Q+
Sbjct: 468 AEFFLQEERLTQMRNE 483
>gi|28898680|ref|NP_798285.1| MarR family transcriptional regulator [Vibrio parahaemolyticus RIMD
2210633]
gi|28806898|dbj|BAC60169.1| transcriptional regulator, MarR family [Vibrio parahaemolyticus
RIMD 2210633]
gi|328474755|gb|EGF45560.1| MarR family transcriptional regulator [Vibrio parahaemolyticus
10329]
Length = 158
Score = 35.7 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 4 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 39
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+++L+ + IK L + N T T I +RL N+L+ +R K
Sbjct: 40 -RAINELDNVTIKQLSNHTNMSQATATTILDRL-------ERNQLVERRRSVEDKRKVHA 91
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KGEE + P+Q + Q W LL+S +Q
Sbjct: 92 VLTEKGEE-ALRQAPTPLQEHFINRFQKLEEWEQTLLLSSVQ 132
>gi|148265978|ref|YP_001232684.1| hypothetical protein Gura_3967 [Geobacter uraniireducens Rf4]
gi|146399478|gb|ABQ28111.1| hypothetical protein Gura_3967 [Geobacter uraniireducens Rf4]
Length = 285
Score = 35.7 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 30/189 (15%)
Query: 9 FESNKIRTIVD-KDQNIWFVAKDVATALGYE-NSNEAINAH-CKGVAKRYPLKTEGGIQK 65
FES KIR++ D + +F DV L + NA K +++ L + G K
Sbjct: 10 FESKKIRSLWDAEKGKWYFSIVDVIEILTESPRPRKYWNALKTKLISEGSELSPKMGQLK 69
Query: 66 V----------RIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTGSY----SVEA 111
+ + + RL+ P A+ F+RW+ Y +E
Sbjct: 70 MQAADGKYYLTDVADTEQLLRLIQSIPSPKAEPFKRWLARV---------GYERLEEIEN 120
Query: 112 PKLRATSASTVLRV----HKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKH 167
P+L A + + + +E+ + ++D RGV + L A +
Sbjct: 121 PELTAKRMRELYKAKGYSDEWIEKRVRGIAIRDELTNEWQKRGVKEQREYSILTAEISRA 180
Query: 168 LPSSDNDEY 176
EY
Sbjct: 181 TFGMTPSEY 189
>gi|218689474|ref|YP_002397686.1| putative antirepressor in prophage [Escherichia coli ED1a]
gi|218690231|ref|YP_002398443.1| putative antirepressor in prophage [Escherichia coli ED1a]
gi|218427038|emb|CAR07914.2| putative antirepressor in prophage [Escherichia coli ED1a]
gi|218427795|emb|CAR08708.2| putative antirepressor in prophage [Escherichia coli ED1a]
Length = 231
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 17/128 (13%)
Query: 119 ASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLT 178
T+ + +LA+Q + +NQL + K VD + +
Sbjct: 104 PRTLPEALRFAAKLAEQKAVLENQLAIAA----PKAEFVDN----------YVEASGLMG 149
Query: 179 ITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEERGGKMCDVPMQHVEGST 238
++ + L + LL+ G+ ++G P + G +
Sbjct: 150 FREVAKLLGIKETD--FRLFLLENGIMYR-LAGKMTPYSHHLDAGRFSVKTGETGNGHAF 206
Query: 239 QQLKWNSN 246
Q+K+
Sbjct: 207 TQVKFTPK 214
>gi|17233151|ref|NP_490241.1| DNA-damage-inducible protein [Nostoc sp. PCC 7120]
gi|17135673|dbj|BAB78219.1| DNA-damage-inducible protein [Nostoc sp. PCC 7120]
Length = 266
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 42/178 (23%)
Query: 1 MSTIT--------PFEFESNKIRTIVDKDQNIWFVAKDVATALGYENSN---EAINA--- 46
M+ IT PF+ +IR I D D +++A+D+ LGY+ +AIN
Sbjct: 1 MNAITSAQSNTDSPFD----QIRKI-DDDGTEYWLARDLMPILGYQQWRRLEDAINRAIA 55
Query: 47 HCKGVAKR-------YPLKTEGGIQKVRI-ISEPDVYRLLVK--STLPSAQKFERWVFEE 96
CK + + P K+ GG +S Y + S P + +
Sbjct: 56 ACKNIGQESENHFLPMPAKSTGGRPGDDFKLSRHGCYLTAMNGDSRKPEIAAAQNYFAV- 114
Query: 97 VLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTKI 154
+L S + ++ + +E+ K + Q + ++ V +
Sbjct: 115 -----------KTREAELAPQSQELLSQLLETIEQQNKVIEAQ-GQAIAQLQAQVQTL 160
>gi|210623099|ref|ZP_03293586.1| hypothetical protein CLOHIR_01536 [Clostridium hiranonis DSM 13275]
gi|210153902|gb|EEA84908.1| hypothetical protein CLOHIR_01536 [Clostridium hiranonis DSM 13275]
Length = 147
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 61/157 (38%), Gaps = 22/157 (14%)
Query: 2 STITPFEFESNKIRTIVDKDQN-IWFVAKDVATALGYENSNEAINAHCKGVAKRYPLKTE 60
+ I F ++ + +D+ +W A +AL ++ + I H V K + E
Sbjct: 3 NDIIIFRNGELELEVTISEDRETVWLSANQ-MSAL-FDRDEKTIRKHINNVFKEKEVNKE 60
Query: 61 GGIQKVRI--ISEPDVY-------RLLVKSTLPSAQKFERWVFEEVLPTLRKTGSYSVEA 111
QK+R+ + +P ++ + + F +W ++ K Y ++
Sbjct: 61 NNTQKMRVDGVKQPVLFYSLDVIISVGYRVKSQRGVDFRKWAS-----SILK--EYMIKG 113
Query: 112 PKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVN 148
+ + + +++ +E +K A K + L +N
Sbjct: 114 YSI---NQKRIEALNRTVEIQSKIAESKPKEKELMIN 147
>gi|311977366|ref|YP_003986485.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
gi|308204174|gb|ADO17975.1| uncharacterized Bro-N domain-containing protein [Acanthamoeba
polyphaga mimivirus]
Length = 85
Score = 35.4 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 18/45 (40%)
Query: 49 KGVAKRYPLKTEGGIQKVRIISEPDVYRLLVKSTLPSAQKFERWV 93
K L + +K + I+ L+ S P A K ++W+
Sbjct: 18 KNFGHLNILIPKSLDKKTKFINLSGFCNLIHHSKKPFAMKIKKWL 62
>gi|163803973|ref|ZP_02197797.1| transcriptional regulator, MarR family protein [Vibrio sp. AND4]
gi|159172224|gb|EDP57131.1| transcriptional regulator, MarR family protein [Vibrio sp. AND4]
Length = 158
Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 94 FEEVLPTLRKTGSYSVEAPKLRATSASTVLRVHKHLEELAKQAGLKDNQLLLKVNRGVTK 153
+EEVL ++R+ + + H ++L+K++GL QL+L
Sbjct: 4 YEEVLVSIRQ-----------------IIRAIDLHSKKLSKESGLTAPQLILM------- 39
Query: 154 ITGVDQLEAMDIKHLPSSDNDEYLTITQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGY 213
+ +L+ + IK L S N T T I +RL N+L+ + K
Sbjct: 40 -RAISELDNVTIKQLSSHTNMSQATATTILDRL-------ERNQLVERHRSIEDKRKVHA 91
Query: 214 RPTPKGEERGGKMCDVPMQHVEGSTQQLK--WNSNLLVSFLQ 253
T KG+E K P+Q + Q W +LL+S +Q
Sbjct: 92 LLTEKGKE-ALKQAPTPLQEHFINRFQKLEEWEQSLLLSSVQ 132
>gi|319902874|ref|YP_004162602.1| hypothetical protein Bache_3088 [Bacteroides helcogenes P 36-108]
gi|319417905|gb|ADV45016.1| hypothetical protein Bache_3088 [Bacteroides helcogenes P 36-108]
Length = 221
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 19/222 (8%)
Query: 9 FESNKIRTIVDKDQNIW-FVAKDVATAL----GYENSNEAINAHCKGVAKRYPLKTEGGI 63
FE K+RT+ D ++ W F DV L Y+ + + N K K +
Sbjct: 10 FEERKVRTVWDDEKEKWYFSIVDVVGILVESKDYQAARKYWNKL-KQRLKEDGFEPVTNC 68
Query: 64 QKVRIISEPDVYRLLVKSTLPSAQKFERWVFEEVLPTLRKTG-SYSVEAPKLRATSASTV 122
++++ +E RL + + W V G Y+ + A
Sbjct: 69 HQLKLRAEDGKMRLTDEIRKDLTDQ---WKLHNV------DGVQYATLTDIIYQQWAGKS 119
Query: 123 LRVHKHLEELAKQ---AGLKDNQLLLKVNRGVTKITGVDQLEAMDIKHLPSSDNDEYLTI 179
+ +K + L K+ + + +L+L + ++ + + + D
Sbjct: 120 AKEYKQFKGLKKENLRDNMTNEELVLNMLAELSTTSITKAKDPQTLGENMQCAVDGGDVA 179
Query: 180 TQIGERLNPPQRARFLNKLLLKRGLQVSKVSGGYRPTPKGEE 221
E+L + L K+ + K G K EE
Sbjct: 180 RVAREQLELKTGREVVTPLSAKKSFEAQKPEGEIEGGEKREE 221
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.310 0.141 0.418
Lambda K H
0.267 0.0431 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,706,311,821
Number of Sequences: 13984884
Number of extensions: 197477610
Number of successful extensions: 455391
Number of sequences better than 10.0: 1478
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 450613
Number of HSP's gapped (non-prelim): 2734
length of query: 262
length of database: 4,792,584,752
effective HSP length: 136
effective length of query: 126
effective length of database: 2,890,640,528
effective search space: 364220706528
effective search space used: 364220706528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 80 (35.4 bits)