HHsearch alignment for GI: 254780127 and conserved domain: COG2176

>COG2176 PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair].
Probab=98.46  E-value=5.7e-07  Score=64.27  Aligned_cols=57  Identities=25%  Similarity=0.282  Sum_probs=44.1

Q ss_pred             CCCEEEEEEHHHHHHHHHHH---CCCCCCCCCEEEHHHHHHHHCC---CCCHHHHHHHHCCCC
Q ss_conf             89819986307759999986---2998786504545889998588---999789999808898
Q gi|254780127|r   64 ETVMCVAHNSLFERILFKKT---LGIDIPSKRWICTSVLARTNGL---PSSLKNACLALNFSE  120 (675)
Q Consensus        64 ~~~~kv~HNa~FD~~vL~~~---lGi~i~~~~~~DTmi~A~~l~~---p~sL~~la~~lgl~~  120 (675)
T Consensus       500 ~d~IlVAHNasFD~gFl~~~~~k~~~~~~~~pvIDTL~lar~L~P~~ksh~Lg~l~kk~~v~l  562 (1444)
T COG2176         500 GDSILVAHNASFDMGFLNTNYEKYGLEPLTNPVIDTLELARALNPEFKSHRLGTLCKKLGVEL  562 (1444)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHCCHHHHHHHHCCCH
T ss_conf             485899616755645788889983885102750119999987574543246677888748637