HHsearch alignment for GI: 254780127 and conserved domain: PRK05761
>PRK05761 DNA polymerase I; Reviewed.
Probab=95.87 E-value=0.044 Score=31.97 Aligned_cols=122 Identities=20% Similarity=0.135 Sum_probs=59.6
Q ss_pred HHHHHHHHHHCCCCCEEEEEEH-HHHHHHHHH---HCCCCCCC------------CCEEEH------H-HHHHH----HC
Q ss_conf 2179999986488981998630-775999998---62998786------------504545------8-89998----58
Q gi|254780127|r 52 AMPSDLLQYLRDETVMCVAHNS-LFERILFKK---TLGIDIPS------------KRWICT------S-VLART----NG 104 (675)
Q Consensus 52 ~~~~~l~~~L~~~~~~kv~HNa-~FD~~vL~~---~lGi~i~~------------~~~~DT------m-i~A~~----l~ 104 (675)
T Consensus 200 elL~~f~~~i~~~DPDIi-yN~d~FD~PYL~~Ra~~lgi~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~y~~~~~~~ 278 (777)
T PRK05761 200 ELLAELFKIIEDYPPVIT-FNGDNFDLPYLYNRALKLGIPKEELPFNVKYASLKTGIHIDLYKFFQNRAIRSYAFYGKYR 278 (777)
T ss_pred HHHHHHHHHHHHCCCCEE-ECCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHEEECCEEC
T ss_conf 999999999974698299-8078764899999999838990006651566540244465044531211355301054742
Q ss_pred -CCCCHHHHHHHH-CCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf -899978999980-889865276637657664100233201345311258768999898877539999999987200214
Q gi|254780127|r 105 -LPSSLKNACLAL-NFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLIPLSD 182 (675)
Q Consensus 105 -~p~sL~~la~~l-gl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~~~~L~~~L~~~~~ 182 (675)
T Consensus 279 ~~~y~Ld~Va~~lLg~~K--~~~----------------------~~~~~~~~~~~l~~Y~l~Da~l~~~L~~~~~~--- 331 (777)
T PRK05761 279 HREAALDAVARALLGESK--VEL----------------------EKNISELNYWELAEYNYRDAEITLKLTFFNNE--- 331 (777)
T ss_pred CCCEEHHHHHHHHCCCCC--CCC----------------------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf 474554788999759974--103----------------------12466334788999989999999998753045---
Q ss_pred HHHHHHHHHHHHHHCCEECCH
Q ss_conf 310178999987516843088
Q gi|254780127|r 183 GERDLWLLDQTINDRGYRIDL 203 (675)
Q Consensus 183 ~E~~l~~~~~~me~~Gi~vD~ 203 (675)
T Consensus 332 ~~l~~~~elsri--~glpl~~ 350 (777)
T PRK05761 332 LVLKLILLLSRI--SKLPIED 350 (777)
T ss_pred HHHHHHHHHHHH--HCCCHHH
T ss_conf 448889999999--7989999