HHsearch alignment for GI: 254780127 and conserved domain: PRK10829
>PRK10829 ribonuclease D; Provisional.
Probab=99.31 E-value=2.6e-09 Score=79.78 Aligned_cols=145 Identities=17% Similarity=0.109 Sum_probs=100.4
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
Q ss_conf 78999804067887000460000268829999999838228999788842217999998648898199863077599999
Q gi|254780127|r 2 SKLFIDIETRSPQPLPKVGVWAYAEQAVITLCAYAWDDEPVKLWDRTEQSAMPSDLLQYLRDETVMCVAHNSLFERILFK 81 (675)
Q Consensus 2 k~l~lD~ET~s~~dl~~~Gl~~y~~~~~I~~i~~a~~~~~~~~~d~~~~~~~~~~l~~~L~~~~~~kv~HNa~FD~~vL~ 81 (675)
T Consensus 23 ~~iavDTEf~r--------~~ty--~p~l~LiQi~~-~~~~~lIDpl~~~d-l~~l~~ll~~~~i~kv~Haa~qDle~l~ 90 (373)
T PRK10829 23 PAIALDTEFVR--------TRTY--YPQLGLIQLFD-GEQLALIDPLGITD-WSPFKALLRDPSITKFLHAGSEDLEVFL 90 (373)
T ss_pred CCEEEECCCCC--------CCCC--CCEEEEEEEEE-CCCEEEEECCCCCC-HHHHHHHHCCCCCEEEEECCCCHHHHHH
T ss_conf 91898577456--------7778--98458999851-89679994787777-6999999709884165206421599999
Q ss_pred HHCCCCCCCCCEEEHHHHHHHHCCCC--CHHHHHH-HHCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 86299878650454588999858899--9789999-80889865276637657664100233201345311258768999
Q gi|254780127|r 82 KTLGIDIPSKRWICTSVLARTNGLPS--SLKNACL-ALNFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQL 158 (675)
Q Consensus 82 ~~lGi~i~~~~~~DTmi~A~~l~~p~--sL~~la~-~lgl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (675)
T Consensus 91 ~~~g~~--p~~iFDTQiAa~~lg~~~~~gy~~Lv~~~l~v~l~K~~---------------~~s-----DW~~RP-Ls~~ 147 (373)
T PRK10829 91 NAFGEL--PQPLIDTQILAAFCGRPLSWGFASMVEEYSGVALDKSE---------------SRT-----DWLARP-LSER 147 (373)
T ss_pred HHCCCC--CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC---------------CCC-----CCCCCC-CCHH
T ss_conf 981988--74077648899865786555899999999396656664---------------627-----578899-9989
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 89887753999999998720021
Q gi|254780127|r 159 FGEYCKRDVEATRELFKRLIPLS 181 (675)
Q Consensus 159 ~~~Ya~~Dv~~~~~L~~~L~~~~ 181 (675)
T Consensus 148 ql~YA~~DV~yL~~l~~~L~~~l 170 (373)
T PRK10829 148 QCEYAAADVWYLLPIAAKLMVET 170 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999