HHsearch alignment for GI: 254780127 and conserved domain: TIGR03491
>TIGR03491 RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.
Probab=94.79 E-value=0.28 Score=26.61 Aligned_cols=16 Identities=13% Similarity=0.266 Sum_probs=8.8
Q ss_pred HHHHHHHHHCCCCCCH
Q ss_conf 7898878870888640
Q gi|254780127|r 446 KVFKTMASHCGLDLQQ 461 (675)
Q Consensus 446 ~~l~~~~~~~G~~~~~ 461 (675)
T Consensus 356 ~al~rLa~~~~~~e~e 371 (457)
T TIGR03491 356 DSLRRLAKRYGTPEAE 371 (457)
T ss_pred HHHHHHHHHCCCCHHH
T ss_conf 9999999871998699