HHsearch alignment for GI: 254780127 and conserved domain: cd06148

>cd06148 Egl_like_exo The Egalitarian (Egl) protein subfamily is composed of Drosophila Egl and similar proteins. Egl is a component of an mRNA-binding complex which is required for oocyte specification. Egl contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. The motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The conservation of this subfamily throughout eukaryotes suggests that its members may be part of ancient RNA processing complexes that are likely to participate in the regulated processing of specific mRNAs.
Probab=99.59  E-value=1.6e-13  Score=107.67  Aligned_cols=157  Identities=17%  Similarity=0.063  Sum_probs=108.9

Q ss_pred             CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEEEECCCCCH--HHHHHHHHHCCCCCEEEEEEHHHHHHH
Q ss_conf             789998040678870004600002688299999998382289997888422--179999986488981998630775999
Q gi|254780127|r    2 SKLFIDIETRSPQPLPKVGVWAYAEQAVITLCAYAWDDEPVKLWDRTEQSA--MPSDLLQYLRDETVMCVAHNSLFERIL   79 (675)
Q Consensus         2 k~l~lD~ET~s~~dl~~~Gl~~y~~~~~I~~i~~a~~~~~~~~~d~~~~~~--~~~~l~~~L~~~~~~kv~HNa~FD~~v   79 (675)
T Consensus        11 ~vi~iD~E~~~--------~~~~---g~l~LiQiat~~~~vyl~D~~~~~~~~~~~~Lk~iLe~~~I~KV~H~~r~D~~~   79 (197)
T cd06148          11 KVIGLDCEGVN--------LGRK---GKLCLVQIATRTGQIYLFDILKLGSIVFINGLKDILESKKILKVIHDCRRDSDA   79 (197)
T ss_pred             CEEEEECCCCC--------CCCC---CCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHH
T ss_conf             99999888678--------8989---988799996489988999616676344568999995699823999610999999


Q ss_pred             HHHHCCCCCCCCCEEEHHHHHHHHCC----------CCCHHHHHH-HHCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99862998786504545889998588----------999789999-8088986527663765766410023320134531
Q gi|254780127|r   80 FKKTLGIDIPSKRWICTSVLARTNGL----------PSSLKNACL-ALNFSEHLTKMEEGKALIARFCKGSIDSPPYDCT  148 (675)
Q Consensus        80 L~~~lGi~i~~~~~~DTmi~A~~l~~----------p~sL~~la~-~lgl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~  148 (675)
T Consensus        80 L~~~~gi~~--~nvfDTqiA~~ll~~~~~~~~~~~~~~sl~~l~~~~l~~~~~~~~~~--~~~--------~~--~~~s~  145 (197)
T cd06148          80 LYHQYGIKL--NNVFDTQVADALLQEQETGGFNPDRVISLVQLLDKYLYISISLKEDV--KKL--------MR--EDPKF  145 (197)
T ss_pred             HHHHHCCCC--CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH--HHH--------HH--CCCCC
T ss_conf             999709970--67031999999975313147677564159999999957640177877--888--------75--06554


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             125876899989887753999999998720021431
Q gi|254780127|r  149 RANHVQAWQLFGEYCKRDVEATRELFKRLIPLSDGE  184 (675)
Q Consensus       149 ~~~~~~~~~~~~~Ya~~Dv~~~~~L~~~L~~~~~~E  184 (675)
T Consensus       146 W~~RP-Lt~~ql~YAa~DV~yL~~L~~~L~~~Li~~  180 (197)
T cd06148         146 WALRP-LTEDMIRYAALDVLCLLPLYYAMLDALISK  180 (197)
T ss_pred             CCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             46799-999999999998999999999999999999