HHsearch alignment for GI: 254780127 and conserved domain: pfam00476
>pfam00476 DNA_pol_A DNA polymerase family A.
Probab=93.35 E-value=0.092 Score=29.84 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 403666665666765478899999999987511101031088978899999986730789999999
Q gi|254780127|r 460 QQFSQNVKSTSTFEDWEQAESHHLWMQDQYPEFAVKDKLIGTACELVKKAWRAKHQGVLQLWKDLT 525 (675)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~~~~~~~~~~p~i~~~~~~~~ 525 (675)
T Consensus 236 s~~eA~~~i~~~~~~yp~i~~~~~~~~~~a~~~g~v~T~~GR---------rr~lp~~~~~~~~~~ 292 (383)
T pfam00476 236 SREEAKEFIEKYFERFPGVKRYREKTRKEAKKGGYVETLFGR---------RRYLPDIDSRNRSLR 292 (383)
T ss_pred CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCC---------EEECCCCCCCCHHHH
T ss_conf 899999999999997836999999999999968961145687---------675577566678888