HHsearch alignment for GI: 254780127 and conserved domain: pfam03175

>pfam03175 DNA_pol_B_2 DNA polymerase type B, organellar and viral. Like pfam00136, members of this family are also DNA polymerase type B proteins. Those included here are found in plant and fungal mitochondria, and in viruses.
Probab=93.71  E-value=0.17  Score=28.01  Aligned_cols=113  Identities=20%  Similarity=0.106  Sum_probs=52.9

Q ss_pred             EEEEEEH-HHHHHHHHHHCCC----C---CC--------------CCCEEEHHHHHHHHCCCCCHHHHHHHHCCCCCCHH
Q ss_conf             1998630-7759999986299----8---78--------------65045458899985889997899998088986527
Q gi|254780127|r   67 MCVAHNS-LFERILFKKTLGI----D---IP--------------SKRWICTSVLARTNGLPSSLKNACLALNFSEHLTK  124 (675)
Q Consensus        67 ~kv~HNa-~FD~~vL~~~lGi----~---i~--------------~~~~~DTmi~A~~l~~p~sL~~la~~lgl~~~~~k  124 (675)
T Consensus         2 ~~y~HNl~~fD~~fil~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~DS~~-----l~~~sL~~~~~~f~l~~~Kg~   76 (452)
T pfam03175         2 IPYAHNLSKFDGTFILPNLIRKKIIDKKIWKNGIIIKIDFKYKYIKIMVRDSYL-----LLPTSLRKLAKAFNLEVQKGC   76 (452)
T ss_pred             CEECCCCCCCCHHHHHHHHHHCCCCCCEECCCCCEEEEEEECCCEEEEEECCHH-----HHHHHHHHHHHHHCCCCCCCC
T ss_conf             366357642477555544664288763471489479888752627999981455-----433649999998398665786


Q ss_pred             ----HHH-------C-HHHHHHHHHHHH----HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             ----663-------7-657664100233----20134531125876899989887753999999998720021431
Q gi|254780127|r  125 ----MEE-------G-KALIARFCKGSI----DSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLIPLSDGE  184 (675)
Q Consensus       125 ----d~~-------g-k~li~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Ya~~Dv~~~~~L~~~L~~~~~~E  184 (675)
T Consensus        77 fPy~~~~~~~~~~~~~~p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Yc~~DV~iL~~v~~~f~~~~~~~  152 (452)
T pfam03175        77 FPYDFVNKNYMWDKGGFPIEKYWKDFKEYILNKEIWNLKNRPNGYDIRKETIEYCKNDVLVLAKLLISFKNFIYEE  152 (452)
T ss_pred             CCHHHHCHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6817746566526778884554256134566777876640466676299999999999999999999999999998