HHsearch alignment for GI: 254780127 and conserved domain: smart00474

>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=99.74  E-value=1.4e-16  Score=127.82  Aligned_cols=146  Identities=18%  Similarity=0.156  Sum_probs=104.5

Q ss_pred             CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
Q ss_conf             78999804067887000460000268829999999838228999788842217999998648898199863077599999
Q gi|254780127|r    2 SKLFIDIETRSPQPLPKVGVWAYAEQAVITLCAYAWDDEPVKLWDRTEQSAMPSDLLQYLRDETVMCVAHNSLFERILFK   81 (675)
Q Consensus         2 k~l~lD~ET~s~~dl~~~Gl~~y~~~~~I~~i~~a~~~~~~~~~d~~~~~~~~~~l~~~L~~~~~~kv~HNa~FD~~vL~   81 (675)
T Consensus        22 ~~i~~DtE~~~--------~~~~--~~~l~~iql~~~~~~~yi~~~~~~~~~~~~l~~ll~~~~i~kv~hn~k~D~~~L~   91 (172)
T smart00474       22 GEVALDTETTG--------LNSY--SGKLVLIQISVTGEGAFIIDPLALGDDLEILKDLLEDETITKVGHNAKFDLHVLA   91 (172)
T ss_pred             CEEEEECCCCC--------CCCC--CCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
T ss_conf             95999883068--------8537--8758999999689848997012242179999999809998599974599999999


Q ss_pred             HHCCCCCCCCCEEEHHHHHHHHCCC---CCHHHHHHH-HCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf             8629987865045458899985889---997899998-088986527663765766410023320134531125876899
Q gi|254780127|r   82 KTLGIDIPSKRWICTSVLARTNGLP---SSLKNACLA-LNFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQ  157 (675)
Q Consensus        82 ~~lGi~i~~~~~~DTmi~A~~l~~p---~sL~~la~~-lgl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~~~~~~~~~~  157 (675)
T Consensus        92 ~-~gi~l~--~v~Dt~ia~~l~~~~~~~~~L~~l~~~~~~~~l~k~--------------------~~~~~w~~rp-l~~  147 (172)
T smart00474       92 R-FGIELE--NIFDTMLAAYLLLGGPSKHGLATLLKEYLGVELDKE--------------------EQKSDWGARP-LSE  147 (172)
T ss_pred             H-CCCCCC--CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCC--------------------CCCCCCCCCC-CCH
T ss_conf             7-798567--524679987750579864899999999749231555--------------------5646667899-909


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             989887753999999998720021
Q gi|254780127|r  158 LFGEYCKRDVEATRELFKRLIPLS  181 (675)
Q Consensus       158 ~~~~Ya~~Dv~~~~~L~~~L~~~~  181 (675)
T Consensus       148 ~~~~YAa~Da~~~~~l~~~l~~~L  171 (172)
T smart00474      148 EQLQYAAEDADALLRLYEKLEKEL  171 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999972