HHsearch alignment for GI: 254780127 and conserved domain: smart00474
>smart00474 35EXOc 3'-5' exonuclease. 3\' -5' exonuclease proofreading domain present in DNA polymerase I, Werner syndrome helicase, RNase D and other enzymes
Probab=99.74 E-value=1.4e-16 Score=127.82 Aligned_cols=146 Identities=18% Similarity=0.156 Sum_probs=104.5
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
Q ss_conf 78999804067887000460000268829999999838228999788842217999998648898199863077599999
Q gi|254780127|r 2 SKLFIDIETRSPQPLPKVGVWAYAEQAVITLCAYAWDDEPVKLWDRTEQSAMPSDLLQYLRDETVMCVAHNSLFERILFK 81 (675)
Q Consensus 2 k~l~lD~ET~s~~dl~~~Gl~~y~~~~~I~~i~~a~~~~~~~~~d~~~~~~~~~~l~~~L~~~~~~kv~HNa~FD~~vL~ 81 (675)
T Consensus 22 ~~i~~DtE~~~--------~~~~--~~~l~~iql~~~~~~~yi~~~~~~~~~~~~l~~ll~~~~i~kv~hn~k~D~~~L~ 91 (172)
T smart00474 22 GEVALDTETTG--------LNSY--SGKLVLIQISVTGEGAFIIDPLALGDDLEILKDLLEDETITKVGHNAKFDLHVLA 91 (172)
T ss_pred CEEEEECCCCC--------CCCC--CCEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHHH
T ss_conf 95999883068--------8537--8758999999689848997012242179999999809998599974599999999
Q ss_pred HHCCCCCCCCCEEEHHHHHHHHCCC---CCHHHHHHH-HCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 8629987865045458899985889---997899998-088986527663765766410023320134531125876899
Q gi|254780127|r 82 KTLGIDIPSKRWICTSVLARTNGLP---SSLKNACLA-LNFSEHLTKMEEGKALIARFCKGSIDSPPYDCTRANHVQAWQ 157 (675)
Q Consensus 82 ~~lGi~i~~~~~~DTmi~A~~l~~p---~sL~~la~~-lgl~~~~~kd~~gk~li~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (675)
T Consensus 92 ~-~gi~l~--~v~Dt~ia~~l~~~~~~~~~L~~l~~~~~~~~l~k~--------------------~~~~~w~~rp-l~~ 147 (172)
T smart00474 92 R-FGIELE--NIFDTMLAAYLLLGGPSKHGLATLLKEYLGVELDKE--------------------EQKSDWGARP-LSE 147 (172)
T ss_pred H-CCCCCC--CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCC--------------------CCCCCCCCCC-CCH
T ss_conf 7-798567--524679987750579864899999999749231555--------------------5646667899-909
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 989887753999999998720021
Q gi|254780127|r 158 LFGEYCKRDVEATRELFKRLIPLS 181 (675)
Q Consensus 158 ~~~~Ya~~Dv~~~~~L~~~L~~~~ 181 (675)
T Consensus 148 ~~~~YAa~Da~~~~~l~~~l~~~L 171 (172)
T smart00474 148 EQLQYAAEDADALLRLYEKLEKEL 171 (172)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999972