PSIBLAST alignment of GI: 254780127 and protein with PDB id: 2ajq
>gi|116666722|pdb|2AJQ|A Chain A, Structure Of Replicative Dna Polymerase Provides Insigts Into The Mechanisms For Processivity, Frameshifting And Editing Length = 704
>gi|116666726|pdb|2AJQ|F Chain F, Structure Of Replicative Dna Polymerase Provides Insigts Into The Mechanisms For Processivity, Frameshifting And Editing Length = 704
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/482 (12%), Positives = 102/482 (21%), Gaps = 140/482 (29%)
Query: 225 VKLTDGIIRSSRQTYALRMYLFLITGIDLVDMSE-------GTLKSILSHSNITQLAKDL 277
+ ++ + ++ L + + L+ + Q A DL
Sbjct: 326 YTPVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDPEKQAAIDL 385
Query: 278 ILNRLASSGSAILKLN---TLSEAVSSDGRLRGTLQFYGASRTGRWSGCVFQPQNLPRQE 334
I L V+ DG++ G++ GA TGR + +P
Sbjct: 386 IKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGA-VTGRATHAFPNLAQIP--- 441
Query: 335 RSEEILTQTIQALNRGETIADPLGLASDCVRSCI--------IASNGKKLVVADLAGIEA 386
+ R+ I D +G+E
Sbjct: 442 --------------------GVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDASGLEL 481
Query: 387 RVLAWIAGEDWKIKAFANGEDIYVTTYAKAFNTPIDKVSKEQRAIGKVMELALGYQGGAK 446
R LA + F NGE + R K Y G +
Sbjct: 482 RCLAHF------MARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYGFLYGAGDE 535
Query: 447 VFKTMASHCGLDLQQFSQNVKSTSTFEDWEQAESHHLWMQDQYPEFAVKDKLIGTACELV 506
+ +
Sbjct: 536 KI--------------------------------------------GQIVGAGKERGKEL 551
Query: 507 KKAWRAKHQGVLQLWKDLTEGFACVVQEGGSISARRVANVPRLVMRRHKRDVHIVLPSSR 566
KK + + +Q+ S++ VA ++ +R I R
Sbjct: 552 KKKFLENTPAI--------AALRESIQQTLVESSQWVAGEQQVKWKRR----WIKGLDGR 599
Query: 567 RLVYSDVKGDCSYLNTATSQLMRERTYGGKLTENIVQAISRDILCEGMKN----ATKNGY 622
++ ++Q+ I + + G
Sbjct: 600 KVHVRSPHA---------------------ALNTLLQSAGALICKLWIIKTEEMLVEKGL 638
Query: 623 D--------IVLTVHDEIVSETPDTPYFSV--GTLCSLMTKNPS-WAKGLPLKAEGYEAK 671
+ VHDEI V T M W L EG
Sbjct: 639 KHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGDHWNFRCLLDTEGKMGP 698
Query: 672 RY 673
+
Sbjct: 699 NW 700