PSIBLAST alignment of GI: 254780127 and protein with PDB id: 2hhq

>gi|122920392|pdb|2HHQ|A Chain A, O6-Methyl-Guanine:t Pair In The Polymerase-10 Basepair Position Length = 580
>gi|122920396|pdb|2HHS|A Chain A, O6-Methyl:c Pair In The Polymerase-10 Basepair Position Length = 580
>gi|122920400|pdb|2HHT|A Chain A, C:o6-Methyl-Guanine Pair In The Polymerase-2 Basepair Position Length = 580

 Score =  271 bits (692), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 77/565 (13%), Positives = 164/565 (29%), Gaps = 128/565 (22%)

Query: 130 ALIARFCKGSIDSPPYDCTRANHVQAWQLFGEYCKRDVEATRELFKRLIPLS-------- 181
            +         ++      +        +  E+  R   A  EL +  +           
Sbjct: 119 KMKQYEAVRPDEAVYGKGAKRAVPDE-PVLAEHLVRKAAAIWELERPFLDELRRNEQDRL 177

Query: 182 --DGERDLWLLDQTINDRGYRIDLDLVLKLQELIAQERKKLDEDIVKLTDGIIRSSRQTY 239
             + E+ L  +   +   G ++D   + ++ + +A++   +++ I +L      +     
Sbjct: 178 LVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEF-NINSPK 236

Query: 240 ALRMYLFLITGIDLVDMSE---GTLKSILSHSNITQLAKDLILNRLASSGSAILKLNTLS 296
            L + LF    + ++  ++    T   +L          + IL+           +  L 
Sbjct: 237 QLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLL 296

Query: 297 EAVSSDGRLRGTLQFYGASRTGRWSGCVFQPQNLPRQERSEEILTQTIQALNRGETIADP 356
           + V  D +   T+     ++TGR S      QN+P                         
Sbjct: 297 KVVRPDTKKVHTIFNQALTQTGRLSSTEPNLQNIP------------------------I 332

Query: 357 LGLASDCVRSCIIASN-GKKLVVADLAGIEARVLAWIAGEDWKIKAFANGEDIYVTTYAK 415
                  +R   + S     +  AD + IE RVLA IA +D  ++AF    DI+  T   
Sbjct: 333 RLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMD 392

Query: 416 AFNTPIDKVSKEQRAIGKVMELALGYQGGAKVFKTMASHCGLDLQQFSQNVKSTSTFEDW 475
            F    D+V+   R   K +                    G+     +QN          
Sbjct: 393 IFQVSEDEVTPNMRRQAKAVNF--------------GIVYGISDYGLAQN---------- 428

Query: 476 EQAESHHLWMQDQYPEFAVKDKLIGTACELVKKAWRAKHQGVLQLWKDLTEGFACVVQEG 535
                                 +         + +     GV +  +++ +         
Sbjct: 429 --------------------LNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVT 468

Query: 536 GSISARRVANVPRLVMRRHKRDVHIVLPSSRRLVYSDVKGDCSYLNTATSQLMRERTYGG 595
             +                           RR    D+      + +   ++        
Sbjct: 469 TLLH--------------------------RRRYLPDITSRNFNVRSFAERM-------- 494

Query: 596 KLTENIVQAISRDILCEGMKNA------TKNGYDIVLTVHDEIVSETPDTPYFSVGTLC- 648
                 +Q  + DI+ + M +        +    ++L VHDE++ E P      +  L  
Sbjct: 495 -AMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVP 553

Query: 649 SLMTKNPSWAKGLPLKAEGYEAKRY 673
            +M +  +    +PLK + +    +
Sbjct: 554 EVMEQAVT--LRVPLKVDYHYGSTW 576