HHsearch alignment of GI: 254780128 and MMDB domain: 2wcw_A_

>2wcw_A (A:) HJC; type II restriction endonuclease, hydrolase, DNA binding protein, holliday junction resolvase; 1.58A {Archaeoglobus fulgidus} PDB: 2wcz_A 2wiw_A 2wiz_A 2wj0_A

Probab=97.56  E-value=0.0013  Score=43.39  Aligned_cols=77  Identities=19%  Similarity=0.121  Sum_probs=60.9

Q ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEEECC-C-CCCCCEEEEECCCCCEEEEEEECCCCC---CCHHHHHHHHH-HHHCCCE
Q ss_conf             8899999999999999789899998118-8-898743999906982999999768988---68899999999-9978988
Q gi|254780128|r    8 YQTEKDVEKRLVTGAKKLDCWVRKASFV-G-RRGCPDRLIITPNGGLWWIEVKKPTGR---LSHQQMSEIEE-LRRRGQR   81 (103)
Q Consensus         8 ~~~E~~ie~~l~~~lk~~G~~~~K~~~~-g-~~GvPDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~-l~~~G~~   81 (103)
                      +++=+..|+.|+..+...|+.|++.... + ....||++.. +++.++.||||+..+.   +++.|..-+.. .+..|+.
T Consensus         5 ~~kG~~~EReL~~~L~~~GfaviRapgSg~~~~~~pDiiA~-~~~~~~~IEvKst~~~~iyi~~eqiekL~~f~~~fg~~   83 (139)
T 2wcw_A            5 KSKGTRFERDLLVELWKAGFAAIRVAGAGVSPFPCPDIVAG-NGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGFGAE   83 (139)
T ss_dssp             --CHHHHHHHHHHHHHHTTCEEEEBTTSSSCSSCCCSEEEE-CSSCEEEEEEEECSSSCEEEEHHHHHHHHHHHHHHTCE
T ss_pred             CHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE-CCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCE
T ss_conf             00136999999999997898699875446788899878840-69816866757502662560999999999999817985


Q ss_pred             EEEE
Q ss_conf             9998
Q gi|254780128|r   82 VKVL   85 (103)
Q Consensus        82 ~~Vv   85 (103)
                      .+++
T Consensus        84 p~ia   87 (139)
T 2wcw_A           84 AYVA   87 (139)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9999