HHsearch results for GI: 254780128 and protein with PDBid: 1gef_A
>1gef_A Holliday junction resolvase; HJC, hydrolase; 2.00A {Pyrococcus furiosus} SCOP: c.52.1.18 PDB: 1ipi_A
Probab=97.10 E-value=0.0033 Score=40.03 Aligned_cols=74 Identities=22% Similarity=0.189 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCC---CCHHHHHHHHH-HHHCCCEEEE
Q ss_conf 8999999999999997898999981188898743999906982999999768988---68899999999-9978988999
Q gi|254780128|r 9 QTEKDVEKRLVTGAKKLDCWVRKASFVGRRGCPDRLIITPNGGLWWIEVKKPTGR---LSHQQMSEIEE-LRRRGQRVKV 84 (103)
Q Consensus 9 ~~E~~ie~~l~~~lk~~G~~~~K~~~~g~~GvPDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~-l~~~G~~~~V 84 (103)
.+=+..|+.+++.+...|+.+... ++ +|-||++.. +++.++.||||+.++. ++++|...+-. .+..|....|
T Consensus 3 rKG~~~ERel~~~l~~~Gf~v~R~--~g-Sg~~Dlia~-~~~~~~~IEvKs~~~~~iyv~~eq~~~l~~~a~~fg~~p~i 78 (123)
T 1gef_A 3 RKGAQAERELIKLLEKHGFAVVRS--AG-SKKVDLVAG-NGKKYLCIEVKVTKKDHLYVGKRDMGRLIEFSRRFGGIPVL 78 (123)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEB--GG-GSSCSEEEE-CSSCEEEEEEEEESSSCEEECHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEC--CC-CCCCCEEEC-CCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHCCCEEEE
T ss_conf 642089999999998589139986--79-999887701-69808999757656854887899999999999964997999
Q ss_pred EC
Q ss_conf 85
Q gi|254780128|r 85 LV 86 (103)
Q Consensus 85 v~ 86 (103)
+.
T Consensus 79 a~ 80 (123)
T 1gef_A 79 AV 80 (123)
T ss_dssp EE
T ss_pred EE
T ss_conf 99