HHsearch results for GI: 254780128 and protein with PDBid: 1ob8_A

>1ob8_A Holliday-junction resolvase; hydrolase, enzyme, homologous recombination, holliday junction resolving enzyme, nuclease, archaea; 1.8A {Sulfolobus solfataricus} SCOP: c.52.1.18 PDB: 1ob9_A

Probab=97.48  E-value=0.00066  Score=44.27  Aligned_cols=68  Identities=16%  Similarity=0.124  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHCCCEEEEEE-CCC-CCCCCEEEEECCCCCEEEEEEECCCCC---CCHHHHHHHHHH-HHCCC
Q ss_conf             9999999999997898999981-188-898743999906982999999768988---688999999999-97898
Q gi|254780128|r   12 KDVEKRLVTGAKKLDCWVRKAS-FVG-RRGCPDRLIITPNGGLWWIEVKKPTGR---LSHQQMSEIEEL-RRRGQ   80 (103)
Q Consensus        12 ~~ie~~l~~~lk~~G~~~~K~~-~~g-~~GvPDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~l-~~~G~   80 (103)
                      +..|+.++..+...|+.+++.. +.+ ..|.||++.. +++..++||||+-++.   +++.|..-+..+ +..|.
T Consensus         7 ~~~Er~~~~~L~~~G~~v~r~~~s~~~~~g~iDiiA~-~~~~~~~IEvKs~~~~~iy~~~eqv~~l~~f~~~~g~   80 (135)
T 1ob8_A            7 KNAERELVSILRGEGFNAVRIPTSNSSPNPLPDIFAT-KGNTLLSIECKSTWENKVKVKEHQVRKLLDFLSMFTM   80 (135)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCC-----CCSCSEEEE-ETTEEEEEEEEEESSSEEEECHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE-CCCEEEEEEEEECCCCEEECCHHHHHHHHHHHHHCCC
T ss_conf             9999999999996995899946778888899888995-3999999999963498252699999999999996385