HHSEARCH alignment of GI: 254780128 and SCOP domain: d1ob8a_

Alignment

Probab=97.49  E-value=0.00067  Score=42.77  Aligned_cols=67  Identities=16%  Similarity=0.125  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHCCCEEEEEECCC--CCCCCEEEEECCCCCEEEEEEECCCCC---CCHHHHHHHHHHHHCC
Q ss_conf             9999999999997898999981188--898743999906982999999768988---6889999999999789
Q gi|254780128|r   12 KDVEKRLVTGAKKLDCWVRKASFVG--RRGCPDRLIITPNGGLWWIEVKKPTGR---LSHQQMSEIEELRRRG   79 (103)
Q Consensus        12 ~~ie~~l~~~lk~~G~~~~K~~~~g--~~GvPDli~~~~~g~~~fIEvK~~~gk---ls~~Q~~~~~~l~~~G   79 (103)
                      +..|+.+++.+...|+.+.+..+.|  ..+.||++.. ++++++-||+|+.++.   ++..|...+..+.+..
T Consensus         2 ~~~ERelv~~l~~~gf~vvR~~gSGs~~~~~pDllA~-~~~~~~~IEvKst~~~kiyi~~eqie~L~~f~~~f   73 (124)
T d1ob8a_           2 KNAERELVSILRGEGFNAVRIPTSNSSPNPLPDIFAT-KGNTLLSIECKSTWENKVKVKEHQVRKLLDFLSMF   73 (124)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCC-----CCSCSEEEE-ETTEEEEEEEEEESSSEEEECHHHHHHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE-CCCEEEEEEEEECCCCEEEECHHHHHHHHHHHHHC
T ss_conf             5699999999986994399923578988889878985-79869999998535985998799999999999971

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: Restriction endonuclease-like
family: Hjc-like
domain: Holliday-junction resolvase SSO1176
species: Sulfolobus solfataricus [TaxId: 2287]