HHsearch alignment for GI: 254780129 and conserved domain: COG1199
>COG1199 DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].
Probab=97.45 E-value=0.00076 Score=41.23 Aligned_cols=67 Identities=19% Similarity=0.177 Sum_probs=44.1
Q ss_pred CCCCCHHHHHHHHHHH---HCCC-CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 8713489999999999---6798-19996899988999999999997408994899723310137889999
Q gi|254780129|r 2 HLVLKPHQIVMVNWLL---SHDR-CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEV 68 (220)
Q Consensus 2 ~~~Lrp~Q~~a~~~~~---~~~~-~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~ 68 (220)
T Consensus 13 ~~~~r~~Q~~~~~~v~~a~~~~~~~~iEapTGtGKTl~yL~~al~~~~~~~~~viist~t~~lq~q~~~~~ 83 (654)
T COG1199 13 GFEPRPEQREMAEAVAEALKGGEGLLIEAPTGTGKTLAYLLPALAYAREEGKKVIISTRTKALQEQLLEED 83 (654)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
T ss_conf 89989899999999999981687189988998517599999999867752975999899576888987621