HHsearch alignment for GI: 254780129 and conserved domain: COG1419

>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion].
Probab=95.40  E-value=0.18  Score=27.55  Aligned_cols=136  Identities=15%  Similarity=0.203  Sum_probs=66.5

Q ss_pred             CCC-EEEECCCCCHHHHHHHHHH-HHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             981-9996899988999999999-99740899489972331013788999985155346069986112101122345676
Q gi|254780129|r   20 DRC-ALWASMGSGKTVSVLFALS-TIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPA   97 (220)
Q Consensus        20 ~~~-~l~~~~G~GKT~~ai~~~~-~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (220)
T Consensus       203 ~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDt-YRIGA~EQLk~Ya~im~vp~~-----------------  264 (407)
T COG1419         203 KRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDT-YRIGAVEQLKTYADIMGVPLE-----------------  264 (407)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-CHHHHHHHHHHHHHHHCCCEE-----------------
T ss_conf             85799989988758879999999997532576068997144-115289999999998699559-----------------


Q ss_pred             CEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf             62786566731000000002472000025122013654332036999999985137987998316532488899999999
Q gi|254780129|r   98 HLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNGLIDLWGQIW  177 (220)
Q Consensus        98 ~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~~~el~~ll~  177 (220)
T Consensus       265 --vv~~~~el~~ai---~~l~~~d~ILVDTaGr--s~~D~~~i~el~~~~~~~-~~i~~~Lvlsat~K~~dlkei~~~f~  336 (407)
T COG1419         265 --VVYSPKELAEAI---EALRDCDVILVDTAGR--SQYDKEKIEELKELIDVS-HSIEVYLVLSATTKYEDLKEIIKQFS  336 (407)
T ss_pred             --EECCHHHHHHHH---HHHHCCCEEEEECCCC--CCCCHHHHHHHHHHHHCC-CCCEEEEEEECCCCHHHHHHHHHHHC
T ss_conf             --963999999999---9853188899968998--833789999999997035-66217999845764688999999724


Q ss_pred             HHCC
Q ss_conf             8288
Q gi|254780129|r  178 FLDK  181 (220)
Q Consensus       178 ~l~p  181 (220)
T Consensus       337 ~~~i  340 (407)
T COG1419         337 LFPI  340 (407)
T ss_pred             CCCC
T ss_conf             5886