HHsearch alignment for GI: 254780129 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].

Probab=91.19  E-value=1  Score=23.25  Aligned_cols=46  Identities=17%  Similarity=0.318  Sum_probs=28.9

Q ss_pred             CCHHHHHHHHHHH----HC---CCCEEEECCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf             3489999999999----67---9819996899988999999999997408994
Q gi|254780129|r    5 LKPHQIVMVNWLL----SH---DRCALWASMGSGKTVSVLFALSTIKILDPRP   50 (220)
Q Consensus         5 Lrp~Q~~a~~~~~----~~---~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~   50 (220)
T Consensus        21 ~Re~ei~~l~~~l~~~~~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~   73 (366)
T COG1474          21 HREEEINQLASFLAPALRGERPSNIIIYGPTGTGKTATVKFVMEELEESSANV   73 (366)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             34889999999999985589986079988999873289999999997331567