HHsearch alignment for GI: 254780129 and conserved domain: COG3421
>COG3421 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.46 E-value=0.00063 Score=41.72 Aligned_cols=143 Identities=14% Similarity=0.154 Sum_probs=70.1
Q ss_pred ECCCCCHHHHHHHHHHHHHHCCCCCEEEEEC-CCCCHHHHHHHHHHHCCCCCCEE-----EEEECCCCC--CCCC---CC
Q ss_conf 6899988999999999997408994899723-31013788999985155346069-----986112101--1223---45
Q gi|254780129|r 26 ASMGSGKTVSVLFALSTIKILDPRPVLIIAP-LRVAQYVWKDEVERWSAFSDMTV-----SSLIGSERQ--RIKA---LN 94 (220)
Q Consensus 26 ~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P-~s~~~~~W~~e~~~~~~~~~~~~-----~~~~~~~~~--~~~~---~~ 94 (220)
T Consensus 4 matgsgkt~~ma~lil~~y~kgyr~flffvnq~nile----kt~~nftd~~s~kylf~e~i~~~d~~i~ikkvn~fsehn 79 (812)
T COG3421 4 MATGSGKTLVMAGLILECYKKGYRNFLFFVNQANILE----KTKLNFTDSVSSKYLFSENININDENIEIKKVNNFSEHN 79 (812)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCHHHEEEEECCHHHHH----HHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
T ss_conf 3358870059999999999734041899852116888----888614661556676666663278620245411467567
Q ss_pred CCCCEEEECHHHHHCCCCCC-------CCCCCCCCC-CCCHHHCCCCCCCCCH----H---HHHHHHHHH--HHCCCCEE
Q ss_conf 67662786566731000000-------002472000-0251220136543320----3---699999998--51379879
Q gi|254780129|r 95 TPAHLYIINFENIPWLVKMK-------LDHWDFATI-VVDESTKLKSFRTHQG----T---KQTRALGKV--AFSKVKRF 157 (220)
Q Consensus 95 ~~~~~~i~~~~~l~~~~~~~-------~~~~~~~~i-IiDEaH~~kn~~~~~~----~---k~~k~l~~~--~~~~~~~~ 157 (220)
T Consensus 80 d~iei~fttiq~l~~d~~~~ken~itledl~~~klvfl~deahhl-n~~tkkk~~de~~~~~~we~~v~la~~~nkd~~~ 158 (812)
T COG3421 80 DAIEIYFTTIQGLFSDFTRAKENAITLEDLKDQKLVFLADEAHHL-NTETKKKLNDEASEKRNWESVVKLALEQNKDNLL 158 (812)
T ss_pred CCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 854799722588898887621244138668538368972415442-0554310131778776099999998754987444
Q ss_pred EEECCCCCCC-CHHHHH
Q ss_conf 9831653248-889999
Q gi|254780129|r 158 IELTGTPSPN-GLIDLW 173 (220)
Q Consensus 158 l~LTgTPi~n-~~~el~ 173 (220)
T Consensus 159 lef~at~~k~k~v~~ky 175 (812)
T COG3421 159 LEFSATIPKEKSVEDKY 175 (812)
T ss_pred EHHHHCCCCCCCHHHHH
T ss_conf 01231488533588873