HHsearch alignment for GI: 254780129 and conserved domain: KOG0334
>KOG0334 consensus.
Probab=98.18 E-value=6.8e-06 Score=53.00 Aligned_cols=128 Identities=23% Similarity=0.261 Sum_probs=85.2
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHH-HHHHHHHHH-----CCCCC-EEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 134899999999996798199968999889999-999999974-----08994-89972331013788999985155346
Q gi|254780129|r 4 VLKPHQIVMVNWLLSHDRCALWASMGSGKTVSV-LFALSTIKI-----LDPRP-VLIIAPLRVAQYVWKDEVERWSAFSD 76 (220)
Q Consensus 4 ~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~a-i~~~~~~~~-----~~~~~-~LIi~P~s~~~~~W~~e~~~~~~~~~ 76 (220)
T Consensus 387 k~~~IQ~qAiP~ImsGrdvIgvakTgSGKT~af~LPmirhi~dQr~~~~gdGPi~li~aPtrela~QI~r~~~kf~k~l~ 466 (997)
T KOG0334 387 KPTPIQAQAIPAIMSGRDVIGVAKTGSGKTLAFLLPMIRHIKDQRPLEEGDGPIALILAPTRELAMQIHREVRKFLKLLG 466 (997)
T ss_pred CCCCHHHHHCCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98755664301222577458773268862034421155542047971107886479973777899999999999877417
Q ss_pred CEEEEEECCCC--CCCCCCCCCCCEEEECHHHHHCCCCC----CCCCCCCCCCCCCHHHCC
Q ss_conf 06998611210--11223456766278656673100000----000247200002512201
Q gi|254780129|r 77 MTVSSLIGSER--QRIKALNTPAHLYIINFENIPWLVKM----KLDHWDFATIVVDESTKL 131 (220)
Q Consensus 77 ~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~l~~~~~~----~~~~~~~~~iIiDEaH~~ 131 (220)
T Consensus 467 ir~v~vygg~~~~~qiaelkRg~eIvV~tpGRmiD~l~~n~grvtnlrR~t~lv~deaDrm 527 (997)
T KOG0334 467 IRVVCVYGGSGISQQIAELKRGAEIVVCTPGRMIDILCANSGRVTNLRRVTYLVLDEADRM 527 (997)
T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECHHHHH
T ss_conf 6279842785188789998678965996450323366615776233101103554112354