HHsearch alignment for GI: 254780129 and conserved domain: KOG0336
>KOG0336 consensus.
Probab=98.17 E-value=5.1e-06 Score=53.71 Aligned_cols=158 Identities=19% Similarity=0.207 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH--HH---HH---HHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 89999999999679819996899988999999--99---99---974089948997233101378899998515534606
Q gi|254780129|r 7 PHQIVMVNWLLSHDRCALWASMGSGKTVSVLF--AL---ST---IKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMT 78 (220)
Q Consensus 7 p~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~--~~---~~---~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~ 78 (220)
T Consensus 245 PIqSQaWPI~LQG~DliGVAQTgtgKtL~~L~pg~ihi~aqp~~~~qr~~p~~lvl~ptreLalqie~e~~kysyng~ks 324 (629)
T KOG0336 245 PIQSQAWPILLQGIDLIGVAQTGTGKTLAFLLPGFIHIDAQPKRREQRNGPGVLVLTPTRELALQIEGEVKKYSYNGLKS 324 (629)
T ss_pred CCHHCCCCEEECCCCEEEEEECCCCCCHHHHCCCEEEEECCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 53202332011376447787448984778750540145146111203689854998333888998876776764358432
Q ss_pred EEEEEC-CCCCCCCCCCCCCCEEEECHHHHHCCCCC-CCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 998611-21011223456766278656673100000-0002472000025122013654332036999999985137987
Q gi|254780129|r 79 VSSLIG-SERQRIKALNTPAHLYIINFENIPWLVKM-KLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKR 156 (220)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~~~~~~i~~~~~l~~~~~~-~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~ 156 (220)
T Consensus 325 vc~ygggnR~eqie~lkrgveiiiatPgrlndL~~~n~i~l~siTYlVlDEADrMLDMgF--EpqIrkilldiR--PDRq 400 (629)
T KOG0336 325 VCVYGGGNRNEQIEDLKRGVEIIIATPGRLNDLQMDNVINLASITYLVLDEADRMLDMGF--EPQIRKILLDIR--PDRQ 400 (629)
T ss_pred EEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCEEEEEEEEEEEECCHHHHHCCCC--CHHHHHHHHHCC--CCCE
T ss_conf 887548785468998745741776078517655531720011258898612666644566--288898865227--7622
Q ss_pred EEEECCCCCCCCH
Q ss_conf 9983165324888
Q gi|254780129|r 157 FIELTGTPSPNGL 169 (220)
Q Consensus 157 ~l~LTgTPi~n~~ 169 (220)
T Consensus 401 tvmTSAT-WP~~V 412 (629)
T KOG0336 401 TVMTSAT-WPEGV 412 (629)
T ss_pred EEEECCC-CCHHH
T ss_conf 5531055-86689