HHsearch alignment for GI: 254780129 and conserved domain: KOG0336

>KOG0336 consensus.
Probab=98.17  E-value=5.1e-06  Score=53.71  Aligned_cols=158  Identities=19%  Similarity=0.207  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH--HH---HH---HHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCE
Q ss_conf             89999999999679819996899988999999--99---99---974089948997233101378899998515534606
Q gi|254780129|r    7 PHQIVMVNWLLSHDRCALWASMGSGKTVSVLF--AL---ST---IKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMT   78 (220)
Q Consensus         7 p~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~--~~---~~---~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~   78 (220)
T Consensus       245 PIqSQaWPI~LQG~DliGVAQTgtgKtL~~L~pg~ihi~aqp~~~~qr~~p~~lvl~ptreLalqie~e~~kysyng~ks  324 (629)
T KOG0336         245 PIQSQAWPILLQGIDLIGVAQTGTGKTLAFLLPGFIHIDAQPKRREQRNGPGVLVLTPTRELALQIEGEVKKYSYNGLKS  324 (629)
T ss_pred             CCHHCCCCEEECCCCEEEEEECCCCCCHHHHCCCEEEEECCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCE
T ss_conf             53202332011376447787448984778750540145146111203689854998333888998876776764358432


Q ss_pred             EEEEEC-CCCCCCCCCCCCCCEEEECHHHHHCCCCC-CCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf             998611-21011223456766278656673100000-0002472000025122013654332036999999985137987
Q gi|254780129|r   79 VSSLIG-SERQRIKALNTPAHLYIINFENIPWLVKM-KLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKR  156 (220)
Q Consensus        79 ~~~~~~-~~~~~~~~~~~~~~~~i~~~~~l~~~~~~-~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~  156 (220)
T Consensus       325 vc~ygggnR~eqie~lkrgveiiiatPgrlndL~~~n~i~l~siTYlVlDEADrMLDMgF--EpqIrkilldiR--PDRq  400 (629)
T KOG0336         325 VCVYGGGNRNEQIEDLKRGVEIIIATPGRLNDLQMDNVINLASITYLVLDEADRMLDMGF--EPQIRKILLDIR--PDRQ  400 (629)
T ss_pred             EEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCCEEEEEEEEEEEECCHHHHHCCCC--CHHHHHHHHHCC--CCCE
T ss_conf             887548785468998745741776078517655531720011258898612666644566--288898865227--7622


Q ss_pred             EEEECCCCCCCCH
Q ss_conf             9983165324888
Q gi|254780129|r  157 FIELTGTPSPNGL  169 (220)
Q Consensus       157 ~l~LTgTPi~n~~  169 (220)
T Consensus       401 tvmTSAT-WP~~V  412 (629)
T KOG0336         401 TVMTSAT-WPEGV  412 (629)
T ss_pred             EEEECCC-CCHHH
T ss_conf             5531055-86689