HHsearch alignment for GI: 254780129 and conserved domain: KOG0343
>KOG0343 consensus.
Probab=98.88 E-value=9.6e-09 Score=69.38 Aligned_cols=173 Identities=17% Similarity=0.176 Sum_probs=101.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHCC-----CCCEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf 71348999999999967981999689998899999-9999997408-----99489972331013788999985155346
Q gi|254780129|r 3 LVLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVL-FALSTIKILD-----PRPVLIIAPLRVAQYVWKDEVERWSAFSD 76 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai-~~~~~~~~~~-----~~~~LIi~P~s~~~~~W~~e~~~~~~~~~ 76 (220)
T Consensus 90 v~~teiQ~~~Ip~aL~G~DvlGAAkTGSGKTLAFlvPvlE~L~r~kWs~~DGlGalIISPTRELA~QtFevL~kvgk~h~ 169 (758)
T KOG0343 90 VKMTEIQRDTIPMALQGHDVLGAAKTGSGKTLAFLVPVLEALYRLKWSPTDGLGALIISPTRELALQTFEVLNKVGKHHD 169 (758)
T ss_pred CCHHHHHHHHCCHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC
T ss_conf 56999987641422057500010235888446543999999997177887883269956529999999999998752056
Q ss_pred CEEEEEECCCCCC-CCCCCCCCCEEEECHHHHHCCCCC--CCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 0699861121011-223456766278656673100000--0002472000025122013654332036999999985137
Q gi|254780129|r 77 MTVSSLIGSERQR-IKALNTPAHLYIINFENIPWLVKM--KLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSK 153 (220)
Q Consensus 77 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~l~~~~~~--~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~ 153 (220)
T Consensus 170 fSaGLiiGG~~~k~E~eRi~~mNILVCTPGRLLQHmde~~~f~t~~lQmLvLDEADR~LDMG---Fk~tL~~Ii~~-lP~ 245 (758)
T KOG0343 170 FSAGLIIGGKDVKFELERISQMNILVCTPGRLLQHMDENPNFSTSNLQMLVLDEADRMLDMG---FKKTLNAIIEN-LPK 245 (758)
T ss_pred CCCCEEECCCHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHH---HHHHHHHHHHH-CCH
T ss_conf 43113665712688997662577699661789987541678787760478732088898776---78889999873-772
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHCC
Q ss_conf 9879983165324888999999998288
Q gi|254780129|r 154 VKRFIELTGTPSPNGLIDLWGQIWFLDK 181 (220)
Q Consensus 154 ~~~~l~LTgTPi~n~~~el~~ll~~l~p 181 (220)
T Consensus 246 ~RQTLLFSATqt-~svkdLaR-LsL~dP 271 (758)
T KOG0343 246 KRQTLLFSATQT-KSVKDLAR-LSLKDP 271 (758)
T ss_pred HHEEEEEECCCC-HHHHHHHH-HHCCCC
T ss_conf 330466632551-13999997-534798