HHsearch alignment for GI: 254780129 and conserved domain: KOG0387

Probab=100.00  E-value=4.8e-43  Score=266.36  Aligned_cols=193  Identities=25%  Similarity=0.378  Sum_probs=152.3

Q ss_pred             CCCCHHHHHHHHHHHH----CCCCEEEECCCCCHHHHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf             7134899999999996----7981999689998899999999999740--899489972331013788999985155346
Q gi|254780129|r    3 LVLKPHQIVMVNWLLS----HDRCALWASMGSGKTVSVLFALSTIKIL--DPRPVLIIAPLRVAQYVWKDEVERWSAFSD   76 (220)
Q Consensus         3 ~~Lrp~Q~~a~~~~~~----~~~~~l~~~~G~GKT~~ai~~~~~~~~~--~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~   76 (220)
T Consensus       204 ~~Lf~yQreGV~WL~~L~~q~~GGILgDeMGLGKTIQiisFLaaL~~S~k~~~paLIVCP~Tii-~qW~~E~~~w~p~~r  282 (923)
T KOG0387         204 SKLFPYQREGVQWLWELYCQRAGGILGDEMGLGKTIQIISFLAALHHSGKLTKPALIVCPATII-HQWMKEFQTWWPPFR  282 (923)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHH-HHHHHHHHHHCCCEE
T ss_conf             8864888988999999973257876201235764015899999875024325865998248899-999999987476537


Q ss_pred             CEEEEEECCC-------------CCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH
Q ss_conf             0699861121-------------011223456766278656673100000000247200002512201365433203699
Q gi|254780129|r   77 MTVSSLIGSE-------------RQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQT  143 (220)
Q Consensus        77 ~~~~~~~~~~-------------~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~  143 (220)
T Consensus       283 v~ilh~t~s~~r~~~~~~~~~~~~~L~r~~~~~~~ilitty~~~r~-~~d~l~~~~W~y~ILDEGH~IrNp----ns~is  357 (923)
T KOG0387         283 VFILHGTGSGARYDASHSSHKKDKLLIRKVATDGGILITTYDGFRI-QGDDLLGILWDYVILDEGHRIRNP----NSKIS  357 (923)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCEEEEEHHHHCC-CCCCCCCCCCCEEEECCCCCCCCC----CCHHH
T ss_conf             9997147765444431013443122203530468479974224200-475234650347982376504698----50899


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCCCH
Q ss_conf             999998513798799831653248889999999982888534699999999616624204635
Q gi|254780129|r  144 RALGKVAFSKVKRFIELTGTPSPNGLIDLWGQIWFLDKGKRLGLSFKSFVERWFHTQQVGSSI  206 (220)
Q Consensus       144 k~l~~~~~~~~~~~l~LTgTPi~n~~~el~~ll~~l~p~~~~~~~~~~F~~~y~~~~~~~~~~  206 (220)
T Consensus       358 lackki---~T~~RiILSGTPiQNnL~ELwsLfDFv~PG~-Lg-t~~~F~~~f~~pI~~Ggya  415 (923)
T KOG0387         358 LACKKI---RTVHRIILSGTPIQNNLTELWSLFDFVFPGK-LG-TLPVFQQNFEHPINRGGYA  415 (923)
T ss_pred             HHHHHC---CCCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CC-CHHHHHHHHHHHEECCCCC
T ss_conf             999861---5666488618621010899987766406774-45-5177876301110035657