HHsearch alignment for GI: 254780129 and conserved domain: KOG0924
>KOG0924 consensus.
Probab=97.56 E-value=0.00099 Score=40.58 Aligned_cols=149 Identities=18% Similarity=0.209 Sum_probs=65.7
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCC-CCCEEEEE--CCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC
Q ss_conf 99999679819996899988999999999997408-99489972--3310137889999851553460699861121011
Q gi|254780129|r 13 VNWLLSHDRCALWASMGSGKTVSVLFALSTIKILD-PRPVLIIA--PLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQR 89 (220)
Q Consensus 13 ~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~-~~~~LIi~--P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~ 89 (220)
T Consensus 365 l~~ir~n~vvvivgETGSGKTTQl~---QyL~edGY~~~GmIGcTQPRRvAAiSVAkrVa~---EM~~~lG~~VGYsI-R 437 (1042)
T KOG0924 365 LSVIRENQVVVIVGETGSGKTTQLA---QYLYEDGYADNGMIGCTQPRRVAAISVAKRVAE---EMGVTLGDTVGYSI-R 437 (1042)
T ss_pred HHHHHHCCEEEEEECCCCCCHHHHH---HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHH---HHCCCCCCCCCEEE-E
T ss_conf 9998638579999358898501667---999862245587154357227899999999999---85876453112488-8
Q ss_pred CCCCCCC-CCEEEECHHHHHC--CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCC
Q ss_conf 2234567-6627865667310--0000000247200002512201365433203699999998513-7987998316532
Q gi|254780129|r 90 IKALNTP-AHLYIINFENIPW--LVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFS-KVKRFIELTGTPS 165 (220)
Q Consensus 90 ~~~~~~~-~~~~i~~~~~l~~--~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~-~~~~~l~LTgTPi 165 (220)
T Consensus 438 FEdvT~~~T~IkymTDGiLLrEsL~d~~L~--kYSviImDEAHER-s---lNtDilfGllk~~larRrdlKliVtSATm~ 511 (1042)
T KOG0924 438 FEDVTSEDTKIKYMTDGILLRESLKDRDLD--KYSVIIMDEAHER-S---LNTDILFGLLKKVLARRRDLKLIVTSATMD 511 (1042)
T ss_pred EEECCCCCEEEEEECCCHHHHHHHHHHHHH--HEEEEEECHHHHC-C---CCHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 520478760578742305779776330044--4017885114330-3---005899999999987422635997622024
Q ss_pred CCCHHHHHH
Q ss_conf 488899999
Q gi|254780129|r 166 PNGLIDLWG 174 (220)
Q Consensus 166 ~n~~~el~~ 174 (220)
T Consensus 512 a~kf~nfFg 520 (1042)
T KOG0924 512 AQKFSNFFG 520 (1042)
T ss_pred HHHHHHHHC
T ss_conf 899988727