HHsearch alignment for GI: 254780129 and conserved domain: KOG0948
>KOG0948 consensus.
Probab=99.03 E-value=7.3e-10 Score=75.80 Aligned_cols=148 Identities=18% Similarity=0.303 Sum_probs=99.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH-HHHHCCCCCEEEEECCCCCHHHHHHHHH-HHCCCCCCEEE
Q ss_conf 713489999999999679819996899988999999999-9974089948997233101378899998-51553460699
Q gi|254780129|r 3 LVLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVLFALS-TIKILDPRPVLIIAPLRVAQYVWKDEVE-RWSAFSDMTVS 80 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~~~~-~~~~~~~~~~LIi~P~s~~~~~W~~e~~-~~~~~~~~~~~ 80 (220)
T Consensus 128 F~LDpFQ~~aI~Cidr~eSVLVSAHTSAGKTVVAeYAIA~sLr~--kQRVIYTSPIKALSNQKYREl~~EF~D-----VG 200 (1041)
T KOG0948 128 FTLDPFQSTAIKCIDRGESVLVSAHTSAGKTVVAEYAIAMSLRE--KQRVIYTSPIKALSNQKYRELLEEFKD-----VG 200 (1041)
T ss_pred CCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHH--CCEEEEECHHHHHCCHHHHHHHHHHCC-----CC
T ss_conf 43480676545311279638998405788523799999999876--485896073155411548999988463-----65
Q ss_pred EEECCCCCCCCCCCCCCCEEEECHHHHHCCC---CCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 8611210112234567662786566731000---0000024720000251220136543320369999999851379879
Q gi|254780129|r 81 SLIGSERQRIKALNTPAHLYIINFENIPWLV---KMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRF 157 (220)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~---~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~ 157 (220)
T Consensus 201 LMTGDV-----TInP~ASCLVMTTEILRsMLYRGSEvmrEVaW--VIFDEIHYMRDkE--RGVVWEETI--IllP~~vr~ 269 (1041)
T KOG0948 201 LMTGDV-----TINPDASCLVMTTEILRSMLYRGSEVMREVAW--VIFDEIHYMRDKE--RGVVWEETI--ILLPDNVRF 269 (1041)
T ss_pred EEECCE-----EECCCCCEEEEHHHHHHHHHHCCCHHHHEEEE--EEEEEEHHCCCCC--CCEEEEEEE--EECCCCCEE
T ss_conf 230544-----66898754533799999987433167552314--8862001001344--560235667--853666038
Q ss_pred EEECCCCCCCCH
Q ss_conf 983165324888
Q gi|254780129|r 158 IELTGTPSPNGL 169 (220)
Q Consensus 158 l~LTgTPi~n~~ 169 (220)
T Consensus 270 VFLSAT-iPNA~ 280 (1041)
T KOG0948 270 VFLSAT-IPNAR 280 (1041)
T ss_pred EEEECC-CCCHH
T ss_conf 999565-87779