HHsearch alignment for GI: 254780129 and conserved domain: KOG0952
>KOG0952 consensus.
Probab=97.38 E-value=0.00027 Score=43.81 Aligned_cols=110 Identities=24% Similarity=0.221 Sum_probs=69.1
Q ss_pred CCCEEEECCCCCHHHHHH-HHHHHHHHCCCCCEEEEECCCCCH----HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 981999689998899999-999999740899489972331013----788999985155346069986112101122345
Q gi|254780129|r 20 DRCALWASMGSGKTVSVL-FALSTIKILDPRPVLIIAPLRVAQ----YVWKDEVERWSAFSDMTVSSLIGSERQRIKALN 94 (220)
Q Consensus 20 ~~~~l~~~~G~GKT~~ai-~~~~~~~~~~~~~~LIi~P~s~~~----~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (220)
T Consensus 944 ~~~~~g~ptgsgkt~~ae~a~~~~~~~~p~~kvvyIap~kalvker~~Dw~~r~----~~~g~k~ie~tgd~~pd~~~v- 1018 (1230)
T KOG0952 944 LNFLLGAPTGSGKTVVAELAIFRALSYYPGSKVVYIAPDKALVKERSDDWSKRD----ELPGIKVIELTGDVTPDVKAV- 1018 (1230)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHCCCCCCHHHHC----CCCCCEEEECCCCCCCCHHHE-
T ss_conf 145423776675215888988887503887627997477055306542113221----357742675257667771221-
Q ss_pred CCCCEEEECHHHHHCCCCCCCCC---CCCCCCCCCHHHCCCCC
Q ss_conf 67662786566731000000002---47200002512201365
Q gi|254780129|r 95 TPAHLYIINFENIPWLVKMKLDH---WDFATIVVDESTKLKSF 134 (220)
Q Consensus 95 ~~~~~~i~~~~~l~~~~~~~~~~---~~~~~iIiDEaH~~kn~ 134 (220)
T Consensus 1019 ~~~~~~ittpek~dgi~Rsw~~r~~v~~v~~iv~de~hllg~~ 1061 (1230)
T KOG0952 1019 READIVITTPEKWDGISRSWQTRKYVQSVSLIVLDEIHLLGED 1061 (1230)
T ss_pred ECCCEEECCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCC
T ss_conf 1586388561201572024233112112561020122134677