HHsearch alignment for GI: 254780129 and conserved domain: KOG1001

Probab=99.93  E-value=3.9e-25  Score=163.50  Aligned_cols=170  Identities=23%  Similarity=0.272  Sum_probs=126.9

Q ss_pred             CCCEEEECCCCCHHHHHHHHHHHHHHC--------CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
Q ss_conf             981999689998899999999999740--------899489972331013788999985155346069986112101122
Q gi|254780129|r   20 DRCALWASMGSGKTVSVLFALSTIKIL--------DPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIK   91 (220)
Q Consensus        20 ~~~~l~~~~G~GKT~~ai~~~~~~~~~--------~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~   91 (220)
T Consensus       153 ~ggIladd~glgkt~~ti~l~l~~~~~~~~~~~~~~~kttLivcp~s~~~-qW~~elek~~~~~~l~v~v~~g--r~kd~  229 (674)
T KOG1001         153 RGGILADDMGLGKTVKTIALILKQKLKSKEEDRQKEFKTTLIVCPTSLLT-QWKTELEKVTEEDKLSIYVYHG--RTKDK  229 (674)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCHHHHH-HHHHHHHCCCCCCCEEEEEECC--CCCCC
T ss_conf             45067651014158999999996436771023302467436966658888-8888873358866469999616--42433


Q ss_pred             CCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
Q ss_conf             34567662786566731000000002472000025122013654332036999999985137987998316532488899
Q gi|254780129|r   92 ALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNGLID  171 (220)
Q Consensus        92 ~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~~~e  171 (220)
T Consensus       230 ~el~~~dvVltTy~il~~---~~l~~i~w~Riildea~~ikn~~----tq~~~a---~~~L~a~~RWcLtgtPiqn~~~~  299 (674)
T KOG1001         230 SELNSYDVVLTTYDILKN---SPLVKIKWLRIVLDEAHTIKNKD----TQIFKA---VCQLDAKYRWCLTGTPIQNNLDE  299 (674)
T ss_pred             CHHCCCCEEEEEHHHHHC---CCCCCEEEEEEEECCCCCCCCCC----HHHHHH---HEEECCCEEEEECCCHHHHHHHH
T ss_conf             134177669933788515---35001257888701200267852----676655---13531422254047825664999


Q ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCC
Q ss_conf             999999828885346999999996166242046
Q gi|254780129|r  172 LWGQIWFLDKGKRLGLSFKSFVERWFHTQQVGS  204 (220)
Q Consensus       172 l~~ll~~l~p~~~~~~~~~~F~~~y~~~~~~~~  204 (220)
T Consensus       300 lysl~~fl~~~p~--~~~~~~~~~i~~p~~~~~  330 (674)
T KOG1001         300 LYSLFKFLEIHPY--CDQNYFKLLIQDPDERNK  330 (674)
T ss_pred             HHHHHHHHHCCCC--HHHHHHHHHHCCHHHHHH
T ss_conf             9999987603873--036789887137153124