HHsearch alignment for GI: 254780129 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=94.99 E-value=0.14 Score=28.16 Aligned_cols=35 Identities=23% Similarity=0.175 Sum_probs=23.1
Q ss_pred CCCEEEEC-CCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 98199968-9998899999999999740899489972
Q gi|254780129|r 20 DRCALWAS-MGSGKTVSVLFALSTIKILDPRPVLIIA 55 (220)
Q Consensus 20 ~~~~l~~~-~G~GKT~~ai~~~~~~~~~~~~~~LIi~ 55 (220)
T Consensus 97 P~Vim~vGlqGsGKTTT~aKLA~~~kk~g-~kv~lva 132 (433)
T PRK00771 97 PQTILLVGLQGSGKTTTAAKLARYFQKKG-LKVGVIC 132 (433)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEE
T ss_conf 85899973788978999999999999779-9467850